Psyllid ID: psy2854

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Secondary Structure (PSIPRED)
cHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHccHHHHHHHccccccccEEEEccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHEEEEHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEccHHccccHHHHHHHcccccccHHccccEEEEEEEccHHcccccEEEEccccccccccccHHcccHHHHHHHHHHHHHccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFksrswsklkaspfykpmegkvciitgansgigYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINnagvsvpikeklttkegyevhFGINHVGHFLLTNLLIERIQKVVIVGsslmdrgtidfdnlngekgfvqkghsnpaycnsklmnyyFGAELYLKyadkgvdvsvvcpgwcytnlfrhadIKFYQKVMIFPIAMMVVIVGsslmdrgtidfdnlngekgfvqkghsnpaycnsklmnyYFGAELYLKYadkgvdvcvvcpgwcytnlfrhadIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Flexible Loop (DISEMBL)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYfksrswsklkaspfykpmegkVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Low Complexity Region (SEG)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Disordered region (IsUnstruct)
***NILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLF*****
Disordered Region (DISOPRED)
***NI*SFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKK***
Disordered Region (DISEMBL)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Disordered Region (DISPRO)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKD**
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLTNILSFFRDNDKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAxxxxxxxxxxxxxxxxxxxxxSFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEVLFKKDDE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	384	2.2.26 [Sep-21-2011]
Q9ERI6	334	Retinol dehydrogenase 14	yes	N/A	0.536	0.616	0.399	2e-35
Q9HBH5	336	Retinol dehydrogenase 14	yes	N/A	0.536	0.613	0.385	6e-35
Q96NR8	316	Retinol dehydrogenase 12	no	N/A	0.526	0.639	0.384	5e-32
Q8TC12	318	Retinol dehydrogenase 11	no	N/A	0.523	0.632	0.405	2e-31
Q8NBN7	331	Retinol dehydrogenase 13	no	N/A	0.585	0.679	0.364	6e-31
Q9QYF1	316	Retinol dehydrogenase 11	no	N/A	0.549	0.667	0.400	9e-31
P59837	316	Retinol dehydrogenase 12	no	N/A	0.505	0.613	0.389	1e-30
Q8BYK4	316	Retinol dehydrogenase 12	no	N/A	0.520	0.632	0.393	2e-30
Q8CEE7	334	Retinol dehydrogenase 13	no	N/A	0.536	0.616	0.380	5e-29
Q17QU7	377	Dehydrogenase/reductase S	no	N/A	0.559	0.570	0.367	6e-29

>sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 140/233 (60%), Gaps = 27/233 (11%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--------- 104
           M GK  +ITGANSG+G  TA EL +L A V++GCR   R +EA  +L++E+         
Sbjct: 42  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPD 101

Query: 105 -QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVH 162
             DGQ+V+ EL+LAS  S++ F + ++++ P++ VLINNAGV   P  +   T++G+E+ 
Sbjct: 102 GTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTK---TEDGFEMQ 158

Query: 163 FGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
           FG+NH+GHFLLTNLL+  ++     ++V+V S L   G I+F++LN E+ +      N +
Sbjct: 159 FGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSY------NKS 212

Query: 218 YC--NSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           +C   SKL N  F  EL  +     V V+V+ PG   TNL RH  I    + +
Sbjct: 213 FCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPL 265

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  148 bits (374), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 140/236 (59%), Gaps = 30/236 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD------- 106
           M GK  +ITGANSG+G  TA EL +L A V++GCR   R +EA  +L++E++        
Sbjct: 41  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPE 100

Query: 107 ------GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGY 159
                 G++++ EL+LAS  S++ F + ++++ P++ VLINNAG+   P    + T++G+
Sbjct: 101 PGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPY---MKTEDGF 157

Query: 160 EVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS 214
           E+ FG+NH+GHFLLTNLL+  ++     ++V+V S L   G I+FD+LN E+ +      
Sbjct: 158 EMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDLNSEQSY------ 211

Query: 215 NPAYC--NSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           N ++C   SKL N  F  EL  +     V V+V+ PG   TNL RH  I    K +
Sbjct: 212 NKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPL 267

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3

 Score =  139 bits (349), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 11/213 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV +ITGAN+GIG ETA+ELA   A V + CR +++G+ A  +++ + ++ Q+++ +
Sbjct: 37  LPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRK 96

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+L+   SI+ FA+  + +  ++H+LINNAGV +    K  T +G+E H G+NH+GHFLL
Sbjct: 97  LDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSK--TADGFETHLGVNHLGHFLL 154

Query: 174 TNLL-----IERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           T LL     +    +VV V S     G I F +L  EK + +      AYC+SKL N  F
Sbjct: 155 TYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSEKRYSR----GFAYCHSKLANVLF 210

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
             EL  +    GV    V PG   + L RH+ +
Sbjct: 211 TRELAKRLQGTGVTTYAVHPGVVRSELVRHSSL 243

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  137 bits (344), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 129/212 (60%), Gaps = 11/212 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV ++TGAN+GIG ETAKELA+  A V L CR + +G+   ++++    + Q+++ +
Sbjct: 39  LPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRK 98

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+L+   SI+ FAK  + +   +HVLINNAGV +    K  T +G+E+H G+NH+GHFLL
Sbjct: 99  LDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSK--TADGFEMHIGVNHLGHFLL 156

Query: 174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           T+LL+E+++     ++V V S     G I F NL GEK +    ++  AYC+SKL N  F
Sbjct: 157 THLLLEKLKESAPSRIVNVSSLAHHLGRIHFHNLQGEKFY----NAGLAYCHSKLANILF 212

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
             EL  +    GV    V PG   + L RH+ 
Sbjct: 213 TQELARRLKGSGVTTYSVHPGTVQSELVRHSS 244

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score =  135 bits (339), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 137/239 (57%), Gaps = 14/239 (5%)

Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           A P    + GK  I+TGAN+GIG +TA ELA+    ++L CR M + + A + ++ E  +
Sbjct: 29  ACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLN 88

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGI 165
             +    L+LAS  SI+ FA  ++++  ++ +LINNAGV   P     TT++G+E+ FG+
Sbjct: 89  HHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCP---HWTTEDGFEMQFGV 145

Query: 166 NHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
           NH+GHFLLTNLL+++++     +++ + S     G IDFD+LN +    +K ++  AYC 
Sbjct: 146 NHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQ---TRKYNTKAAYCQ 202

Query: 221 SKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI--KFYQKVMIFPIAMMVV 277
           SKL    F  EL  +    GV V+ + PG   T L RH  I    +    + PI  ++V
Sbjct: 203 SKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHTGIHGSTFSSTTLGPIFWLLV 261

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2

 Score =  134 bits (338), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 133/222 (59%), Gaps = 11/222 (4%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV I+TGAN+GIG ETAK+LA+  A V L CR + +G+ A  +++    + Q+ + +
Sbjct: 36  LPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVRK 95

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+LA   SI+ FAK+ + +   +H+LINNAGV +    K  T +G+E+H G+NH+GHFLL
Sbjct: 96  LDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSK--TADGFEMHIGVNHLGHFLL 153

Query: 174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           T+LL+E+++     ++V + S     G I F NL GEK F   G    AYC+SKL N  F
Sbjct: 154 THLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEK-FYSAG---LAYCHSKLANILF 209

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIF 270
             EL  +    GV    V PG  ++ L R++ I  +   + F
Sbjct: 210 TKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRWLWQLFF 251

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 19/213 (8%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV +ITGAN+GIG ETA+ELA+  A V + CR +++G+ A  +++ + ++ Q+++ +L+
Sbjct: 39  GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           L+   SI+ FA+  + +  ++H+LINNAGV +    K  T +G+E H  +NH+GHFLLT+
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSK--TADGFETHLAVNHLGHFLLTH 156

Query: 176 LLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK----GFVQKGHSNPAYCNSKLMNY 226
           LL+ R++     +VV + S     G I F +L G+K    GF        AYC+SKL N 
Sbjct: 157 LLLGRLKESAPARVVNLSSVAHHLGKIRFHDLQGDKYYNLGF--------AYCHSKLANV 208

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
            F  EL  +    GV    V PG   + L RH+
Sbjct: 209 LFTRELAKRLKGTGVTTYAVHPGIVRSKLVRHS 241

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 130/211 (61%), Gaps = 11/211 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV +ITGAN+GIG ETA+ELA+  A V + CR +++G+ A  +++ + ++ Q+++ +
Sbjct: 37  IPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 96

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+L+   SI+ FA+  + +  K+H+LINNAGV +    K  T +G+E HFG+NH+GHFLL
Sbjct: 97  LDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSK--TTDGFETHFGVNHLGHFLL 154

Query: 174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           T LL+ER++     +VV + S     G I F +L G+K +     S  AY +SKL N  F
Sbjct: 155 TYLLLERLKESAPARVVNLSSIAHLIGKIRFHDLQGQKRYC----SAFAYGHSKLANLLF 210

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             EL  +    GV    V PG   + + R++
Sbjct: 211 TRELAKRLQGTGVTAYAVHPGVVLSEITRNS 241

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1

 Score =  129 bits (323), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 130/218 (59%), Gaps = 12/218 (5%)

Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           A P    + GK  I+TGAN+GIG +TA ELAK    V+L CR M + + A + ++ E  +
Sbjct: 29  ACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIRGETLN 88

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGI 165
            ++    L+LAS  SI+ FA+ V+K+  ++ +L+NNA V   P     TT++G+E+ FG+
Sbjct: 89  PRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCP---HWTTEDGFEMQFGV 145

Query: 166 NHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
           N++GHFLLTNLL+++++     +++ + S     G IDF++LN +   ++K  +  AYC 
Sbjct: 146 NYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQ---MKKYDTKAAYCQ 202

Query: 221 SKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
           SKL    F  EL  +    GV V+ + PG   T L RH
Sbjct: 203 SKLAVVLFTKELSHRLQGSGVTVNALHPGVARTELGRH 240

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1

 Score =  128 bits (322), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 133/231 (57%), Gaps = 16/231 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  ++TGANSGIG  TA ELA+  A VVL CRS  RG+ A   L++E  + +++ M 
Sbjct: 34  LRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMA 93

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+LAS  S++ FA   +   P++ +LI+NAG+S   +    T+E + +   +NH+G FLL
Sbjct: 94  LDLASLASVRAFATAFLSSEPRLDILIHNAGISSCGR----TREPFNLLLRVNHIGPFLL 149

Query: 174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE-KGFVQKGHSNPAYCNSKLMNYY 227
           T+LL+ R++     +VV+V S+   RG +DF  L+    G+ Q+     AY NSKL N  
Sbjct: 150 THLLLPRLKTSAPSRVVVVSSAAHRRGRLDFTRLDHPVVGWQQELR---AYANSKLANVL 206

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLF-RHADIKFYQKVMIFPIAMMVV 277
           F  EL  +    GV      PG   + LF RH  +  + + ++ P+A +V+
Sbjct: 207 FARELATQLEGTGVTCYAAHPGPVNSELFLRH--VPGWLRPLLRPLAWLVL 255

Putative oxidoreductase.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
383861709	321	PREDICTED: retinol dehydrogenase 11-like	0.619	0.741	0.508	3e-67
242006589	349	restnol dehydrogenase, putative [Pedicul	0.669	0.736	0.456	1e-61
48142169	326	PREDICTED: retinol dehydrogenase 11-like	0.619	0.730	0.508	2e-61
380027948	326	PREDICTED: LOW QUALITY PROTEIN: retinol	0.619	0.730	0.508	4e-61
340710009	326	PREDICTED: retinol dehydrogenase 11-like	0.619	0.730	0.504	4e-61
350415925	326	PREDICTED: retinol dehydrogenase 11-like	0.619	0.730	0.508	5e-61
322792389	326	hypothetical protein SINV_10565 [Solenop	0.619	0.730	0.479	3e-60
307180351	326	Retinol dehydrogenase 11 [Camponotus flo	0.619	0.730	0.467	1e-59
307191847	326	Retinol dehydrogenase 11 [Harpegnathos s	0.619	0.730	0.479	2e-59
332025917	326	Retinol dehydrogenase 11 [Acromyrmex ech	0.619	0.730	0.475	3e-59

>gi|383861709|ref|XP_003706327.1| PREDICTED: retinol dehydrogenase 11-like [Megachile rotundata]

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/246 (50%), Positives = 171/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W K K       ++G+V I+TGANSGIG ET KELAK KATV+L CR++   +
Sbjct: 20  RKCRERTWGKCKN---VDSLQGRVFIVTGANSGIGKETVKELAKRKATVILACRTLQSAR 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
           + + ++  ++  G++V M+LNLASF SI+ FA  V+K + ++HVLINNAGV VP KE   
Sbjct: 77  DTVSEIHAQITTGELVPMKLNLASFSSIREFATEVIKNFTEVHVLINNAGVYVPFKEHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFV 209
           T +G+E+HFG+NH+GHFLLTNLL E ++K     ++IV S L + G IDF NLNGEKG V
Sbjct: 137 TDDGFEIHFGVNHLGHFLLTNLLFEHLKKSAPSRIIIVTSKLFESGVIDFSNLNGEKGLV 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NPAYCNSKL N YFG EL  +  D GV+V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPAYCNSKLANTYFGIELAKRAKDTGVNVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A++
Sbjct: 257 SPVALL 262

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006589|ref|XP_002424132.1| restnol dehydrogenase, putative [Pediculus humanus corporis] gi|212507449|gb|EEB11394.1| restnol dehydrogenase, putative [Pediculus humanus corporis]

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 177/267 (66%), Gaps = 10/267 (3%)

Query: 16  LLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKE 75
           ++++ +Y        L I R  +  SW + K    Y  ++GKV +ITG+NSGIG ETA+E
Sbjct: 1   MVNTFMYVAFPVAVVLGIIRKLREISWGRFKD---YSSLDGKVFLITGSNSGIGKETARE 57

Query: 76  LAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK 135
           LAK  A V++ CR +     A+  ++K    G++V M L+LASF SIK+F++  ++++PK
Sbjct: 58  LAKRNACVIMACRDLNNANLAINDIRKTTTSGELVPMHLDLASFASIKDFSEKALEKFPK 117

Query: 136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSS 190
           I VLINNAGV  P+ +   TK+G+E++FGINH+GHFLLT LLIERI+     ++VIV S+
Sbjct: 118 IDVLINNAGVYFPLSQSQKTKDGFEMNFGINHLGHFLLTQLLIERIKDSAPSRIVIVSST 177

Query: 191 LMDRGTIDFDNLNGEKGF--VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCP 248
           L + G +D ++LN  K    V+K  +NPAYC SKL N Y   EL  +  + GVDV  VCP
Sbjct: 178 LHESGVLDLNDLNMTKNMDSVKKLRNNPAYCASKLANMYHSRELASRLKNTGVDVYAVCP 237

Query: 249 GWCYTNLFRHADIKFYQKVMIFPIAMM 275
           G+ YT LFR++DIK++Q +M  PIA++
Sbjct: 238 GFTYTGLFRYSDIKWWQYIMFMPIALL 264

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48142169|ref|XP_397308.1| PREDICTED: retinol dehydrogenase 11-like [Apis mellifera]

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/246 (50%), Positives = 171/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W + K +     + G+V I+TGANSGIG ET KELAK KATV+L CR++   +
Sbjct: 20  RKCRERTWGRCKNT---DSLVGRVFIVTGANSGIGKETVKELAKRKATVILACRNIQTAR 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+  ++ ++  G++V MELNLASF SIK F   V+K + +IHVLINNAGV VP KE+  
Sbjct: 77  NAISDIRTQISTGELVPMELNLASFSSIKEFVTEVIKNFAEIHVLINNAGVYVPFKEQAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           T +G+E+HFG+NH+GHFLLTNLL+E ++     ++VIV S L + G IDF NLN EKG V
Sbjct: 137 TDDGFEIHFGVNHLGHFLLTNLLLEHLKQNGPNRIVIVTSKLFESGIIDFSNLNCEKGLV 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NPAYCNSKL N YFG EL  +  D G++V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPAYCNSKLANTYFGIELAKRTKDNGINVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A++
Sbjct: 257 SPVALL 262

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027948|ref|XP_003697675.1| PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 11-like [Apis florea]

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 125/246 (50%), Positives = 172/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W + K +     + G+V I+TGANSGIG ET KELAK KATV+L CR++   +
Sbjct: 20  RKCRERTWGRCKNT---DSLVGRVFIVTGANSGIGKETVKELAKRKATVILACRNIQTAR 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+  ++ ++  G++V MELNLASF SIK FA  V+K++ +IHVLINNAGV VP KE+  
Sbjct: 77  NAVSDIRTQISTGELVPMELNLASFSSIKEFATEVIKKFAEIHVLINNAGVYVPFKEQAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           T +G+E+HFG+NH+GHFLLTNLL+E ++     ++VIV S L + G IDF NLN EKG V
Sbjct: 137 TDDGFEIHFGVNHLGHFLLTNLLLEHLKQNGPNRIVIVTSKLFESGIIDFSNLNCEKGLV 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NPAYCNSKL N YFG EL  +  D  ++V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPAYCNSKLANTYFGIELAKRTKDNDINVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A++
Sbjct: 257 SPVALL 262

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710009|ref|XP_003393591.1| PREDICTED: retinol dehydrogenase 11-like [Bombus terrestris]

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 124/246 (50%), Positives = 171/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W K K +     + G+V I+TGANSGIG ET KELAK KATV+L CR +   Q
Sbjct: 20  RKCRERTWGKCKNT---DSLLGRVFIVTGANSGIGKETVKELAKRKATVILACRYLQTAQ 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+  ++ ++  G++V M+LNLASF SI+ F   V++ + ++HVLINNAGV VP KE   
Sbjct: 77  NAISDIRTQISTGKLVPMKLNLASFSSIREFVAEVIENFAEVHVLINNAGVYVPFKEHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           T +G+E+HFG+NH+GHFLLTNLL+E ++     ++VIV S L + GTIDF NLNGEKG V
Sbjct: 137 TDDGFEIHFGVNHLGHFLLTNLLLEHLKRNGPSRIVIVTSKLFESGTIDFSNLNGEKGLV 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NPAYCNSKL N YFG EL  +  + G++V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPAYCNSKLANTYFGIELAKQTKNSGINVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A++
Sbjct: 257 SPVALL 262

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415925|ref|XP_003490792.1| PREDICTED: retinol dehydrogenase 11-like [Bombus impatiens]

 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 125/246 (50%), Positives = 171/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W K K +     + G+V I+TGANSGIG ET KELAK KATV+L CR +   Q
Sbjct: 20  RKCRERTWGKCKNT---DSLLGRVFIVTGANSGIGKETVKELAKRKATVILACRYLQTAQ 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+  ++ ++  G++V M+LNLASF SI+ F   V++ + +IHVLINNAGV VP KE   
Sbjct: 77  NAISDIRTQISTGKLVPMKLNLASFSSIREFVAEVIENFVEIHVLINNAGVYVPFKEHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           T +G+E+HFG+NH+GHFLLTNLL+E ++     ++VIV S L + GTIDF NLNGEKG V
Sbjct: 137 TDDGFEIHFGVNHLGHFLLTNLLLEHLKRNGPSRIVIVTSKLFESGTIDFSNLNGEKGLV 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NPAYCNSKL N YFG EL  +  + G++V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPAYCNSKLANTYFGIELAKQTKNSGINVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A++
Sbjct: 257 SPVALL 262

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792389|gb|EFZ16373.1| hypothetical protein SINV_10565 [Solenopsis invicta]

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 174/246 (70%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  +  SW + K++     ++G+V ++TGANSGIG ET KELAK KATV++ CR++   +
Sbjct: 20  RKCREHSWGRCKST---SNLQGRVFLVTGANSGIGKETTKELAKRKATVIMACRNVQNAK 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+ +++ ++  G+++ MEL+LASF SI++FA  V+K++P+IHVLINNAGV  P+K+   
Sbjct: 77  NAIAEIRYKISTGELIPMELDLASFSSIRDFANEVVKKFPQIHVLINNAGVYAPLKDHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           TK+G+E+HFG+NH+GHFLLTNLL++ ++     ++V+V S LM+ G IDF NLNGEK   
Sbjct: 137 TKDGFEIHFGVNHLGHFLLTNLLLDCLKESAPSRIVVVTSKLMESGVIDFSNLNGEKALP 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            K   NP YCNSKL N YF  EL  +  + GV+V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKSRMNPGYCNSKLANAYFATELANRTKNTGVNVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            PIA+M
Sbjct: 257 SPIALM 262

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180351|gb|EFN68377.1| Retinol dehydrogenase 11 [Camponotus floridanus]

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/246 (46%), Positives = 173/246 (70%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W + K++     ++G+V ++TGANSGIG ET KELAK +AT+++ CR +   +
Sbjct: 20  RKCRERTWGRCKST---SNLQGQVFLVTGANSGIGKETVKELAKRRATIIMACRDVQNAK 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
             + +++ ++  G+++ MEL+LASF SI+ FA  V+K +P IHVLINNAGV  P+K+   
Sbjct: 77  NVIAEIRSKISTGELIPMELDLASFSSIREFANKVLKNFPHIHVLINNAGVYAPLKDHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           TK+G+E+HFG+NH+GHFLLTNLL++R++     ++V+V S L++ G IDF+NLNGEKG  
Sbjct: 137 TKDGFEIHFGVNHLGHFLLTNLLLDRLKQSAPSRIVVVTSKLLESGVIDFENLNGEKGLP 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            K   NP YCNSKL N YF  EL  +  + GV+V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKSRMNPGYCNSKLANAYFATELAKRTENTGVNVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A+M
Sbjct: 257 SPVALM 262

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191847|gb|EFN75273.1| Retinol dehydrogenase 11 [Harpegnathos saltator]

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 170/246 (69%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + RSW + +++     + G V ++TGANSGIG ET KELAK  AT+++ CR M   +
Sbjct: 20  RKCRERSWGRCRST---SNLHGLVFLVTGANSGIGKETVKELAKRNATIIMACRDMKSAK 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
             + +++ ++  G+++ MEL+LASF SI+ FA  V+K + +IHVLINNAGV  P+K++  
Sbjct: 77  NVIAEIRSKIPTGELIPMELDLASFVSIREFANKVLKDFSQIHVLINNAGVYAPLKDRAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           TK+G+E+HFG+NH+GHFLLTNLL++ ++     +VV+V S L++ G IDF NLNGEKG  
Sbjct: 137 TKDGFEIHFGVNHLGHFLLTNLLLDCLKQSAPSRVVVVTSKLLESGVIDFSNLNGEKGLP 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            KG  NP YCNSKL N YF AEL  +  + GV V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKGRMNPGYCNSKLANAYFAAELAKRTENSGVHVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            PIA+M
Sbjct: 257 SPIALM 262

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025917|gb|EGI66073.1| Retinol dehydrogenase 11 [Acromyrmex echinatior]

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 173/246 (70%), Gaps = 8/246 (3%)

Query: 35  RYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
           R  + R+W K K++     ++ +V ++TGANSGIG ETAKELAK KAT+++ CR +    
Sbjct: 20  RKCRERTWGKCKST---SNLQDRVFLVTGANSGIGKETAKELAKRKATIIMACRDVQSAT 76

Query: 95  EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT 154
            A+ +++ ++  G+++ MEL+LASF SI+ FA  V+K++ +IHVLINNAGV  P+K+   
Sbjct: 77  NAIAEIRSKISTGELIPMELDLASFSSIRKFANEVLKKFSQIHVLINNAGVYAPLKDHAL 136

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV 209
           TK+G+E+HFG+NH+GHFLLTNLL++R++     ++V+V S L++ G IDF NLNGEKG  
Sbjct: 137 TKDGFEIHFGVNHLGHFLLTNLLLDRLKESAPSRIVVVTSKLLESGVIDFSNLNGEKGLP 196

Query: 210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
            K   NP YCNSKL N YF AEL  +  +  V+V +VCPG+ YT LFR+    ++  ++ 
Sbjct: 197 VKSRMNPGYCNSKLANAYFAAELAKRTENTDVNVYMVCPGFTYTGLFRNVKRSWFHYIIF 256

Query: 270 FPIAMM 275
            P+A+M
Sbjct: 257 SPVALM 262

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
FB|FBgn0033205	330	CG2064 [Drosophila melanogaste	0.643	0.748	0.393	9.9e-39
UNIPROTKB|I3LUZ6	315	RDH11 "Uncharacterized protein	0.526	0.641	0.422	1.1e-37
ZFIN|ZDB-GENE-041010-124	286	rdh14a "retinol dehydrogenase	0.552	0.741	0.390	2.4e-37
ZFIN|ZDB-GENE-030131-6605	334	rdh14b "retinol dehydrogenase	0.567	0.652	0.382	1.3e-36
MGI|MGI:1920402	334	Rdh14 "retinol dehydrogenase 1	0.523	0.601	0.410	1.3e-36
RGD|1565196	334	Rdh14 "retinol dehydrogenase 1	0.523	0.601	0.410	1.7e-36
UNIPROTKB|Q6AXX5	316	Rdh11 "Retinol dehydrogenase 1	0.617	0.75	0.389	1.7e-36
UNIPROTKB|E1BM93	319	RDH11 "Uncharacterized protein	0.520	0.626	0.436	2.1e-36
UNIPROTKB|F1SA24	352	RDH11 "Uncharacterized protein	0.455	0.497	0.387	2.2e-36
UNIPROTKB|F1SA23	316	RDH12 "Uncharacterized protein	0.520	0.632	0.398	2.7e-36

FB|FBgn0033205 CG2064 [Drosophila melanogaster (taxid:7227)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 107/272 (39%), Positives = 153/272 (56%)

Query:    13 DKLLLHSLLYTTTITLSALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYET 72
             D LL   +++  TI +    +  Y +   ++K           GKV I+TGAN+GIG ET
Sbjct:     6 DCLLSPLIMWPATIGVGIYFLKEYMQGGKFTKDTDET------GKVFIVTGANTGIGKET 59

Query:    73 AKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ 132
             A E+A+   TV L CR M R ++A + + KE  +  I   EL+L+S DSI+ F     K+
Sbjct:    60 ALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKE 119

Query:   133 YPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVI 186
              PK+HVLINNAGV   P   K  TK+GYE+  G+NH+GHFLLTNLL++ ++     ++V+
Sbjct:   120 QPKLHVLINNAGVMRCP---KTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVV 176

Query:   187 VGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVV 246
             V S    RG+I+  +LN EK +  +G    AY  SKL N  F  EL  +    GV V+ +
Sbjct:   177 VSSLAHARGSINVADLNSEKSY-DEGL---AYSQSKLANVLFTRELAKRLEGSGVTVNAL 232

Query:   247 CPGWCYTNLFRHAD------IKFYQKVMIFPI 272
              PG   T L R+        +KF+ K MI+P+
Sbjct:   233 HPGVVDTELARNWAFFQTNLVKFFLKPMIWPL 264

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|I3LUZ6 RDH11 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 90/213 (42%), Positives = 128/213 (60%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             + GKV ++TGAN+GIG ETAKELAK  A V L CR + +G+    +++    + Q+++ +
Sbjct:    36 LPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRK 95

Query:   114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
             L+LA   SI+ FAK  + +   +H+LINNAGV +    K  T +G+E H G+NH+GHFLL
Sbjct:    96 LDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK--TADGFETHMGVNHLGHFLL 153

Query:   174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             T+LL+E+++     +VV V S     G I F NL GEK +    H+  AYCNSKL N  F
Sbjct:   154 THLLLEKLKESAPSRVVNVSSLAHHMGRIHFHNLQGEKFY----HAGLAYCNSKLANVLF 209

Query:   229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
               EL  +    GV    V PG   + L RH+ +
Sbjct:   210 TQELARRLKGSGVTTYSVHPGTVDSELVRHSSL 242

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-041010-124 rdh14a "retinol dehydrogenase 14a (all-trans/9-cis/11-cis)" [Danio rerio (taxid:7955)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 89/228 (39%), Positives = 140/228 (61%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVL 111
             + GK  I+TGANSGIG  T  EL + +A V++ CR   R ++A +++K+E   + G++V+
Sbjct:     2 LRGKTVIVTGANSGIGKATTTELLRRQARVIMACRDRERAEKAAQEIKQEAGPEQGELVI 61

Query:   112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGH 170
               L+LAS  S++ F + ++K+ P+I +LINNAG+   P  +   +++G+E+ F +NH+GH
Sbjct:    62 KLLDLASLKSVRVFCEGIIKEEPRIDILINNAGIYQCPYTK---SEDGFEMQFAVNHLGH 118

Query:   171 FLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
             FLLTNLL++ ++     ++++V S L   G I+FD+LN E+ +  K  S   Y  SKL N
Sbjct:   119 FLLTNLLLDLLKCSAPSRIIVVSSKLYKYGEINFDDLNSEQSY-DKAFS---YARSKLAN 174

Query:   226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIA 273
               F  EL  K  + GV V+ + PG   TNL RH  I    K + F +A
Sbjct:   175 LLFTLELSHKLKETGVTVNALTPGIVRTNLGRHVHIPLLVKPL-FNLA 221

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-030131-6605 rdh14b "retinol dehydrogenase 14b (all-trans/9-cis/11-cis)" [Danio rerio (taxid:7955)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 90/235 (38%), Positives = 139/235 (59%)

Query:    51 YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QD 106
             Y P  M GK  I+TGAN GIG  TA EL KL+A V++ CR   R ++A   ++ +     
Sbjct:    45 YPPALMRGKTVIVTGANCGIGKATAAELLKLQARVIMACRDRQRAEDAARDIQNQAGASQ 104

Query:   107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGI 165
             G+IV+  L+LAS  S++ F + V+++ P+I VLINNAG+   P  +   T+EG+E+  G+
Sbjct:   105 GEIVIKHLDLASLQSVRRFCEEVIREEPRIDVLINNAGLYQCPYSK---TEEGFEMQLGV 161

Query:   166 NHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
             NH+GHFLLTNLL++ ++     +VV+V S L   G+I+F++LN E+ +    + +  Y  
Sbjct:   162 NHLGHFLLTNLLLDLLKQSSPSRVVVVSSKLYKYGSINFEDLNSEQSY----NKSFCYSQ 217

Query:   221 SKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMM 275
             SKL N  F  EL  +     V V+ + PG   T L RH +I    K + + ++ +
Sbjct:   218 SKLANLLFTRELARRLDGTEVTVNALTPGIVRTRLGRHVNIPLLIKPLFWLVSWL 272

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

MGI|MGI:1920402 Rdh14 "retinol dehydrogenase 14 (all-trans and 9-cis)" [Mus musculus (taxid:10090)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 92/224 (41%), Positives = 137/224 (61%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--------- 104
             M GK  +ITGANSG+G  TA EL +L A V++GCR   R +EA  +L++E+         
Sbjct:    42 MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPD 101

Query:   105 -QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVH 162
               DGQ+V+ EL+LAS  S++ F + ++++ P++ VLINNAGV   P  +   T++G+E+ 
Sbjct:   102 GTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTK---TEDGFEMQ 158

Query:   163 FGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
             FG+NH+GHFLLTNLL+  ++     ++V+V S L   G I+F++LN E+ +    + +  
Sbjct:   159 FGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSY----NKSFC 214

Query:   218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
             Y  SKL N  F  EL  +     V V+V+ PG   TNL RH  I
Sbjct:   215 YSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHI 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1565196 Rdh14 "retinol dehydrogenase 14 (all-trans/9-cis/11-cis)" [Rattus norvegicus (taxid:10116)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 92/224 (41%), Positives = 137/224 (61%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--------- 104
             M GK  +ITGANSG+G  TA EL +L A V++GCR   R +EA  +L++E+         
Sbjct:    42 MHGKTVLITGANSGLGRATAGELLRLGARVIMGCRDRARAEEAAGQLRQELGQAGGLGPD 101

Query:   105 -QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVH 162
               DGQ+V+ EL+LAS  S++ F + ++++ P++ VLINNAGV   P  +   T++G+E+ 
Sbjct:   102 ATDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFQCPYTK---TEDGFEMQ 158

Query:   163 FGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
             FG+NH+GHFLLTNLL+  ++     ++V+V S L   G I+F++LN E+ +    + +  
Sbjct:   159 FGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSY----NKSFC 214

Query:   218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
             Y  SKL N  F  EL  +     V V+V+ PG   TNL RH  I
Sbjct:   215 YSRSKLANILFTRELAHRLEGTNVTVNVLHPGIVRTNLGRHIHI 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q6AXX5 Rdh11 "Retinol dehydrogenase 11 (All-trans/9-cis/11-cis)" [Rattus norvegicus (taxid:10116)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 97/249 (38%), Positives = 144/249 (57%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             + GKV I+TGAN+GIG ETAK+LA+  A V L CR M +G+    +++    + Q+++ +
Sbjct:    36 LSGKVAIVTGANTGIGKETAKDLARRGARVYLACRDMQKGELVASEIQATTGNSQVLVRK 95

Query:   114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
             L+LA   SI+ FA+  + +   +H+LINNAGV +    K  T +G+E+HFG+NH+GHFLL
Sbjct:    96 LDLADTKSIRAFAEGFLAEEKYLHILINNAGVMMCPYSK--TADGFEMHFGVNHLGHFLL 153

Query:   174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             T+LL+E+++     +VV V S     G I F NL+GEK F   G    AYC+SKL N  F
Sbjct:   154 THLLLEKLKESGPSRVVNVSSLAHHLGRIHFHNLHGEK-FYSGGL---AYCHSKLANILF 209

Query:   229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHAD-IKFYQKVMIFPIAMMVVIVGSSLMDRG 287
               EL  +     V    V PG  ++ L RH+  +K+  ++  F I        +SL    
Sbjct:   210 TKELARRLKGSRVTTYSVHPGTVHSELIRHSTALKWLWQLFFFFIKTPQQGAQTSLYCAV 269

Query:   288 TIDFDNLNG 296
             T   + L+G
Sbjct:   270 TEGIEGLSG 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E1BM93 RDH11 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 93/213 (43%), Positives = 131/213 (61%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             + GKV ++TGAN+GIG ETAKELA+  A V L CR +  G+    +++    + Q+++ +
Sbjct:    37 LPGKVAVVTGANAGIGKETAKELARRGARVYLACRDVQNGELVAREIQMMTGNQQVLVRK 96

Query:   114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
             L+LA   SI+ FAK  +++   +H+LINNAGV +    K  T +G+E+H G+NH+GHFLL
Sbjct:    97 LDLADTKSIRAFAKRFLEEEKHLHILINNAGVMMCPYSK--TADGFEMHMGVNHLGHFLL 154

Query:   174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             T+LL+E+++     +VV V S     G I F NL GEK F Q G    AYC+SKL N  F
Sbjct:   155 THLLLEKLEESAPSRVVNVSSLAHLLGRIHFHNLQGEK-FYQSGL---AYCHSKLANILF 210

Query:   229 GAELY--LKYADKGVDVSVVCPGWCYTNLFRHA 259
               EL   LK +  GV V  V PG   + L RH+
Sbjct:   211 TQELARRLKASGSGVTVYSVHPGTVNSELVRHS 243

GO:0052650 "NADP-retinol dehydrogenase activity" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0016062 "adaptation of rhodopsin mediated signaling" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1SA24 RDH11 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 313 (115.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 72/186 (38%), Positives = 106/186 (56%)

Query:    81 ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLI 140
             A V L CR + +G+    +++    + Q+++ +L+LA   SI+ FAK  + +   +H+LI
Sbjct:   100 ARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILI 159

Query:   141 NNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRG 195
             NNAGV +    K  T +G+E H G+NH+GHFLLT+LL+E+++     +VV V S     G
Sbjct:   160 NNAGVMMCPYSK--TADGFETHMGVNHLGHFLLTHLLLEKLKESAPSRVVNVSSLAHHMG 217

Query:   196 TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
              I F NL GEK +    H+  AYCNSKL N  F  EL  +    GV    V PG   + L
Sbjct:   218 RIHFHNLQGEKFY----HAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSEL 273

Query:   256 FRHADI 261
              RH+ +
Sbjct:   274 VRHSSL 279

GO:0052650 "NADP-retinol dehydrogenase activity" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0016062 "adaptation of rhodopsin mediated signaling" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1SA23 RDH12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 84/211 (39%), Positives = 133/211 (63%)

Query:    54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             + GKV +ITGAN+GIG ETA+ELA+  A V + CR +++G+ A  +++ + ++ Q+++ +
Sbjct:    37 LPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 96

Query:   114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
             L+L+   SI+ FA+  + +  ++H+LINNAGV +    K  T +G+E H G+NH+GHFLL
Sbjct:    97 LDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSK--TADGFETHLGVNHLGHFLL 154

Query:   174 TNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             T+LL+E+++     +VV + S +   G I F +L GEK +  +G    AYC+SKL N  F
Sbjct:   155 THLLLEQLKASAPARVVNLSSVVHHAGKIRFHDLQGEKHY-NRGF---AYCHSKLANVLF 210

Query:   229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
               EL  +    GV    V PG   + L RH+
Sbjct:   211 TRELAKRLQGTGVTTYAVHPGIVQSELVRHS 241

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	384
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-71
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-63
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-63
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	7e-39
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	8e-39
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-38
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	3e-37
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-36
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	3e-33
cd05233	234	cd05233, SDR_c, classical (c) SDRs	8e-32
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	5e-30
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-28
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	5e-27
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	7e-27
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-26
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-20
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-19
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-19
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	6e-19
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	8e-19
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-19
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-18
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-18
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	9e-18
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-17
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-17
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-16
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-16
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-16
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-16
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-16
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-15
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-15
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	5e-15
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-15
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	7e-15
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-15
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	9e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	9e-15
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-14
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-14
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-14
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-14
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-14
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-14
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	5e-14
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-14
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-13
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	5e-13
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-13
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	7e-13
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-13
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-13
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	9e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-12
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-12
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	4e-12
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-12
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	5e-12
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-12
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	7e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	9e-12
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-11
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-11
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-11
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-11
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-11
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-11
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-11
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	4e-11
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-11
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	5e-11
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	5e-11
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-11
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	9e-11
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	9e-11
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-10
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-10
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-10
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-10
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-10
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-10
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-10
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-10
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-10
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-10
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-10
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-10
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-09
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-09
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-09
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-09
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-09
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-09
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-09
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-09
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	4e-09
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-09
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-09
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-09
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-09
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	7e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-08
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-08
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-08
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-08
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-08
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-08
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	5e-08
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-08
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	7e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-07
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-07
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-07
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	4e-07
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-07
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-07
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-07
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	7e-07
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	7e-07
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	7e-07
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-07
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	8e-07
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	8e-07
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	9e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-06
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-06
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-06
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-06
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	3e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-06
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-06
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	7e-06
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	7e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	8e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	8e-06
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-06
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-06
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-05
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-05
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-05
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-05
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-05
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-05
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-05
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-05
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-05
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-05
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	6e-05
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	9e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-04
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-04
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-04
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	1e-04
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-04
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-04
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-04
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	6e-04
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-04
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	7e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	0.001
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	0.001
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.001
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	0.002
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	0.002
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	0.002
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.002
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.002
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	0.002
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.003
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	0.003
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	0.003
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	0.004
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.004
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  223 bits (570), Expect = 4e-71
 Identities = 85/215 (39%), Positives = 129/215 (60%), Gaps = 13/215 (6%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV +ITGANSGIG ETA+ELAK  A V++ CR+  +G+EA  ++KKE  + ++ +++L+
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           L+S  S++ FA+  + ++P++ +LINNAG+  P   +  TK+G+E+ F +N++GHFLLTN
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAP--PRRLTKDGFELQFAVNYLGHFLLTN 118

Query: 176 LLIERIQK-----VVIVGSSLMDRGTIDFDNL--NGEKGFVQKGHSNPAYCNSKLMNYYF 228
           LL+  ++      +V V S     G IDF++L     K +        AY  SKL N  F
Sbjct: 119 LLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEY----SPYKAYGQSKLANILF 174

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
             EL  +    GV V+ + PG   T L R     F
Sbjct: 175 TRELARRLEGTGVTVNALHPGVVRTELLRRNGSFF 209

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  204 bits (521), Expect = 1e-63
 Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 14/229 (6%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GK  IITGAN+GIG ETA+ELA+  A V++ CR M + +EA  +++++  + ++++  L+
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           LAS  SI+ FA   + +  ++ VLINNAGV   P      T++G+E+ FG+NH+GHFLLT
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP---YSKTEDGFEMQFGVNHLGHFLLT 117

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           NLL++ ++K     +V V S     G I+FD+LN EK +    ++  AYC SKL N  F 
Sbjct: 118 NLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSY----NTGFAYCQSKLANVLFT 173

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADI-KFYQKVMIFPIAMMVV 277
            EL  +    GV V+ + PG   T L RH  I   +   ++ P+    V
Sbjct: 174 RELARRLQGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFV 222

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  203 bits (519), Expect = 5e-63
 Identities = 82/212 (38%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           G+V ++TGAN+G+GYETA  LA   A VVL  R++ +G+ A  ++        + L EL+
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           L S  S++  A  +   YP+I +LINNAGV      K TT +G+E+ FG NH+GHF LT 
Sbjct: 76  LTSLASVRAAADALRAAYPRIDLLINNAGVMYT--PKQTTADGFELQFGTNHLGHFALTG 133

Query: 176 LLIERIQKV----VIVGSSLMDR--GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           LL++R+  V    V+  SS   R    I FD+L  E+ + +      AY  SKL N  F 
Sbjct: 134 LLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA----AYGQSKLANLLFT 189

Query: 230 AELYLKYADKGVDVSVVC--PGWCYTNLFRHA 259
            EL  + A  G     V   PG   T L R+ 
Sbjct: 190 YELQRRLAAAGATTIAVAAHPGVSNTELARNL 221

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  140 bits (356), Expect = 7e-39
 Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 25/215 (11%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GK  I+TG  SG+G ET + LA+  A V++  R     +EAL  +        + ++ L+
Sbjct: 26  GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLD 79

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLT-TKEGYEVHFGINHVGHFLL 173
           LA  +S++ FA+  +    +I +LINNAGV + P     T   +G+E  F  NH+GHF L
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINNAGVMACP----ETRVGDGWEAQFATNHLGHFAL 135

Query: 174 TNLLIERI-----QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP--AYCNSKLMNY 226
            NLL   +      +VV + S+   R  I +D+ +  +G+      +   AY  SK  N 
Sbjct: 136 VNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGY------DKWLAYGQSKTANA 189

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
            F   L     D+GV    V PG   T L RH   
Sbjct: 190 LFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPR 224

Length = 315

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 8e-39
 Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 9/181 (4%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GK  ++TGA+ G+G   A+ LA   A V+L  R+  +G+ A+  ++  V D ++ L  L+
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD 73

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           L+S  S+    + +  +   IH+LINNAGV  P  E+ TT +G+E+ FG NH+GHF LT 
Sbjct: 74  LSSLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTA 132

Query: 176 LLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            L+  ++    +V    S    RG I++D+LN E+ +        AY  SK+    F  E
Sbjct: 133 HLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSY----AGMRAYSQSKIAVGLFALE 188

Query: 232 L 232
           L
Sbjct: 189 L 189

Length = 313

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  138 bits (348), Expect = 4e-38
 Identities = 80/226 (35%), Positives = 115/226 (50%), Gaps = 32/226 (14%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV IITGANSGIG+ETA+  A   A V+L CR+M R   A+ ++ +E    ++  M L+
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           LAS  S++ FA+    +   +HVL+ NA V ++P      T++G E  F +NH+GHF L 
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWT---LTEDGLETTFQVNHLGHFYLV 117

Query: 175 NLL---IERIQKV-VIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---------AYCNS 221
            LL   + R     VIV SS   R    F +L    G +     +P         AY  +
Sbjct: 118 QLLEDVLRRSAPARVIVVSSESHR----FTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRA 173

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPG-----------WCYTNLF 256
           KL N  F  EL+ + + +G+  + + PG           W YT LF
Sbjct: 174 KLCNILFSNELHRRLSPRGITSNSLHPGNMMYSSIHRNWWVYTLLF 219

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  136 bits (344), Expect = 3e-37
 Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 32/228 (14%)

Query: 60  IITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS 118
           +ITGA+SG+G   AK LA+     VV+ CR  ++ ++A +++        +  +  +LAS
Sbjct: 5   VITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSV--LHCDLAS 62

Query: 119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLL 177
            DS++ F  N  +    +  L+ NA V +P  KE   T +G+E+  G+NH+GHFLLTNLL
Sbjct: 63  LDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNLL 122

Query: 178 IERIQK-------VVIVGSSLMDRGTI--------DFDNLNGEKGFVQKGHSNP------ 216
           +E +Q+       +VIVGS   +  T+           +L G  G ++  +S        
Sbjct: 123 LEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMIDGGEFE 182

Query: 217 ---AYCNSKLMNYYFGAELYLKYADK-GVDVSVVCPGWCY--TNLFRH 258
              AY +SK+ N     EL+ +  ++ G+  + + PG C   T LFR 
Sbjct: 183 GAKAYKDSKVCNMLTTYELHRRLHEETGITFNSLYPG-CIAETGLFRE 229

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  131 bits (331), Expect = 6e-36
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 21/222 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLM 112
           + GKV ++TGA+SGIG   A+ LA+  A VV+   RS     EAL    KE   G+   +
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 113 ELNLAS-FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGH 170
             +++   +S++       +++ +I +L+NNAG++ P       T+E ++    +N +G 
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122

Query: 171 FLLTNLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           FLLT   +  ++K  +V + S     G                     AY  SK      
Sbjct: 123 FLLTRAALPLMKKQRIVNISSVAGLGGPPGQ----------------AAYAASKAALIGL 166

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIF 270
              L L+ A +G+ V+ V PG+  T +    +    + +   
Sbjct: 167 TKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRL 208

Length = 251

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  126 bits (318), Expect = 3e-33
 Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 36/243 (14%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           IITGA+SG+G   AK LAK    V++ CR++ + + A ++L   +      ++ ++L   
Sbjct: 10  IITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL--GIPPDSYTIIHIDLGDL 67

Query: 120 DSIKNFAKNVMKQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLI 178
           DS++ F  +       +  L+ NA V +P +KE L + +GYE+    NH+GHFLL NLL+
Sbjct: 68  DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLL 127

Query: 179 ERIQK-------VVIVG------SSLMDRGTI----DFDNLNG-EKGFV--------QKG 212
           E ++K       +VI+G        L  +  I    D  +L+G E GF         +K 
Sbjct: 128 EDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKF 187

Query: 213 HSNPAYCNSKLMNYYFGAELYLKY-ADKGVDVSVVCPGWCY--TNLFRHADIKFYQKVMI 269
               AY +SKL N     EL+ +Y    G+  S + PG C   T LFR+     +QK  +
Sbjct: 188 KPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPG-CVADTPLFRNT-PPLFQK--L 243

Query: 270 FPI 272
           FP 
Sbjct: 244 FPW 246

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  119 bits (301), Expect = 8e-32
 Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 59  CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK-EVQDGQIVLMELNLA 117
            ++TGA+SGIG   A+ LA+  A VVL  R+    +EAL +L   E   G  V ++ +++
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRN----EEALAELAAIEALGGNAVAVQADVS 56

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLL 177
             + ++   +  ++++ ++ +L+NNAG++ P   +  T E ++    +N  G FLLT   
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 178 IERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE- 231
           +  ++K     +V + S            + G +    +     AY  SK        E 
Sbjct: 117 LPHMKKQGGGRIVNISS------------VAGLRPLPGQA----AYAASK-----AALEG 155

Query: 232 ----LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAM 274
               L L+ A  G+ V+ V PG   T +      +  +K +   I +
Sbjct: 156 LTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPL 202

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  117 bits (294), Expect = 5e-30
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 34/229 (14%)

Query: 60  IITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS 118
           IITGA+SG+G  TAK LA+  K  VV+ CR  ++ + A +     +      +M L+LAS
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG--MPKDSYTVMHLDLAS 58

Query: 119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLL 177
            DS++ F  N  +    + VL+ NA V +P  KE   T +G+E+  G NH+GHFLL+ LL
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLL 118

Query: 178 IERIQK-------VVIVGSSLMDRGTI--------DFDNLNGEKGFVQKGHSNP------ 216
           ++ ++K       ++IVGS   +  T+        +  +L G  G +   +S+       
Sbjct: 119 LDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGE 178

Query: 217 -----AYCNSKLMNYYFGAELYLKYADK-GVDVSVVCPGWCY--TNLFR 257
                AY +SK+ N     E + +Y ++ G+  + + PG C   T LFR
Sbjct: 179 FDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPG-CIATTGLFR 226

Length = 308

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  110 bits (278), Expect = 2e-28
 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 31/207 (14%)

Query: 57  KVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           KV ++TGAN GIG+E  ++LAK    TV+L  R + RGQ A+EKL+ E     +   +L+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLS--VRFHQLD 58

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEGYEVHFGINHVGHFLLT 174
           +    SI+  A  V ++Y  + +L+NNAG++    +    T+E        N  G   +T
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVT 118

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL-MNYYF 228
             L+  ++K     +V V S L                    G    AY  SK  +N   
Sbjct: 119 QALLPLLKKSPAGRIVNVSSGL--------------------GSLTSAYGVSKAALNAL- 157

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNL 255
              L  +  + G+ V+  CPGW  T++
Sbjct: 158 TRILAKELKETGIKVNACCPGWVKTDM 184

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  108 bits (272), Expect = 5e-27
 Identities = 73/248 (29%), Positives = 123/248 (49%), Gaps = 36/248 (14%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
             +  V IITGA+SG+G   AK LA   +  V++ CR  ++ ++A + L   +      +
Sbjct: 1   QQKPTV-IITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG--MPKDSYTI 57

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGH 170
           M L+L S DS++ F +   +    +  L+ NA V  P  KE   T +G+E+  G NH+GH
Sbjct: 58  MHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGH 117

Query: 171 FLLTNLLIERIQK-------VVIVGSSLMDRGTI--------DFDNLNG-EKGFV----- 209
           FLL NLL++ ++        ++IVGS   +  T+        +  +L+G   GF      
Sbjct: 118 FLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAM 177

Query: 210 ---QKGHSNPAYCNSKLMNYYFGAELYLKYADK-GVDVSVVCPGWCY--TNLFRHADIKF 263
              ++     AY +SK+ N     EL+ ++ D+ G+  + + PG C   T LFR   +  
Sbjct: 178 IDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPG-CIADTGLFREH-VPL 235

Query: 264 YQKVMIFP 271
           ++   +FP
Sbjct: 236 FRT--LFP 241

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score =  107 bits (268), Expect = 7e-27
 Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 12/216 (5%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           G+  +ITGANSGIG   A  +AK   TV + CR+  R +EA ++++ E  +  I L  ++
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           ++    +  F +   ++  K+HVLINNAG  V  +E   T++G E +F  N +G ++LT 
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRE--LTEDGLEKNFATNTLGTYILTT 118

Query: 176 LLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
            LI  ++K     V+ V S  M    ++ +NL  E+           Y  +K        
Sbjct: 119 HLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFD---GTMVYAQNKRQQVIMTE 175

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK 266
           +   K+ +  +  SV+ PGW  T   R++   F+ +
Sbjct: 176 QWAKKHPE--IHFSVMHPGWADTPAVRNSMPDFHAR 209

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  104 bits (262), Expect = 6e-26
 Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 28/230 (12%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---G 107
             PM+GK  +ITGA+SGIG E AK+LA+    ++L  R     ++ LE L KE++D    
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARR----EDKLEALAKELEDKTGV 56

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           ++ ++  +L+  ++++     + ++   I VL+NNAG          + +  E    +N 
Sbjct: 57  EVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNI 116

Query: 168 VGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           +    LT  ++  + +     ++ +GS+                G +        Y  +K
Sbjct: 117 LALTRLTKAVLPGMVERGAGHIINIGSAA---------------GLIP-TPYMAVYSATK 160

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPI 272
                F   L  +    GV V+ VCPG   T  F       Y       +
Sbjct: 161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELV 210

Length = 265

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 93.0 bits (232), Expect = 1e-21
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 28/215 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK---KEVQDGQIV 110
           ++GKV IITGA+SGIG E A  LA+L A +VL  R     +E LE++K    E+      
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARR----EERLEEVKSECLELGAPSPH 56

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
           ++ L+++  +  +   +  +K +  + +LINNAG+S+      T+ +       +N+ G 
Sbjct: 57  VVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116

Query: 171 FLLTNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL-MN 225
             LT      LIER Q  ++V SS+  +  + F                 AY  SK  + 
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPF---------------RTAYAASKHALQ 161

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
            +F + L  + ++  + V+VVCPG   TN+  +A 
Sbjct: 162 GFFDS-LRAELSEPNISVTVVCPGLIDTNIAMNAL 195

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 88.6 bits (220), Expect = 2e-20
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 19/202 (9%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV ++TGA+ GIG E A+ LA+    V LG R+     E L  L     D  +  +  + 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGD--VEAVPYDA 54

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
              +  +     +  ++ +I VL++NAG+  P   +  +    E HF IN +    LT  
Sbjct: 55  RDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRA 114

Query: 177 LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH-SNPAYCNSKLMNYYFGAELYLK 235
           L+            L + G+     LN   G  ++    N  Y  SK         L  +
Sbjct: 115 LLPA----------LREAGSGRVVFLNSLSG--KRVLAGNAGYSASKFALRALAHALRQE 162

Query: 236 YADKGVDVSVVCPGWCYTNLFR 257
             D GV VS VCPG+  T + +
Sbjct: 163 GWDHGVRVSAVCPGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 86.6 bits (215), Expect = 1e-19
 Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 23/203 (11%)

Query: 60  IITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS 118
           +ITGA+ GIG E  ++L      TV+  CR        L  L        I+ +++    
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDP-SAATELAALGASHSRLHILELDVTDEI 60

Query: 119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT-TKEGYEVHFGINHVGHFLLTN-- 175
            +S +  A+ +      + VLINNAG+            E     F +N +G  LLT   
Sbjct: 61  AESAEAVAERL--GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAF 118

Query: 176 --LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL-MNYYFGAEL 232
             LL++  +  +I  SS +  G+I  +   G            +Y  SK  +N      L
Sbjct: 119 LPLLLKGARAKIINISSRV--GSIGDNTSGG----------WYSYRASKAALN-MLTKSL 165

Query: 233 YLKYADKGVDVSVVCPGWCYTNL 255
            ++    G+ V  + PGW  T++
Sbjct: 166 AVELKRDGITVVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 40/215 (18%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV +ITG +SGIG   A  LA     V+   R+     + LE L + + D   VL EL++
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARN----PDKLESLGELLNDNLEVL-ELDV 55

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKE---GYEVH-FGINHVGH 170
              +SIK   K V++++ +I VL+NNAG  +  P+ E+ + +E    +EV+ FG   V  
Sbjct: 56  TDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPL-EETSIEEVRELFEVNVFGPLRVTR 114

Query: 171 FLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
             L  L+ ++   ++V V S       +      G             YC SK       
Sbjct: 115 AFL-PLMRKQGSGRIVNVSSV----AGLVPTPFLG------------PYCASK-----AA 152

Query: 230 AELY---LKY--ADKGVDVSVVCPGWCYTNLFRHA 259
            E     L+   A  G+ V+++ PG   T    +A
Sbjct: 153 LEALSESLRLELAPFGIKVTIIEPGPVRTGFADNA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 40/214 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
            GKV I+TGA+ GIG   A+ LAK  A VV+   +    +EA ++L +E+++  G  + +
Sbjct: 4   MGKVAIVTGASGGIGRAIAELLAKEGAKVVI---AYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGH 170
           + +++S + ++N  + +++++ KI +L+NNAG+S    + +   T E ++    +N  G 
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTD--MTDEEWDRVIDVNLTGV 118

Query: 171 FLLT----NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            LLT      +I+R   V++  SS+   G      L G             Y  SK    
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSI--WG------LIGA-------SCEVLYSASK---- 159

Query: 227 YFGAELYL------KYADKGVDVSVVCPGWCYTN 254
             GA          + A  G+ V+ V PG   T 
Sbjct: 160 --GAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191

Length = 247

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 85.2 bits (211), Expect = 6e-19
 Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 31/226 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE-ALEKLKKEVQDGQIVLM 112
           + GKV IITG++SGIG  TA   A+L A + L  R   R +E     L+  V + +I+L+
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK--EGYEVHFGINHVGH 170
             +L   +         + ++ ++ +L+NNAG  +  K     +  E Y+    +N    
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAG--ILAKGGGEDQDIEEYDKVMNLNLRAV 118

Query: 171 FLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             LT L +  + K    +V V S            + G + F         YC SK    
Sbjct: 119 IYLTKLAVPHLIKTKGEIVNVSS------------VAGGRSF----PGVLYYCISKAALD 162

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI------KFYQK 266
            F     L+ A KGV V+ V PG   T   R   +      KF  +
Sbjct: 163 QFTRCTALELAPKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSR 208

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 8e-19
 Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 41/223 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+V I+TGA SGIG  TAK  A+  A VV+  R     + A          G+    +
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADR---DAEAAERVAAAIAAGGRAFARQ 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            ++ S ++++     V  ++ ++ VL+NNAG         T +  ++    +N  G FL 
Sbjct: 60  GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLW 119

Query: 174 TNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
               I  +Q+     +V   S L          L G +G         AY  SK      
Sbjct: 120 AKYAIPIMQRQGGGSIVNTASQLA---------LAGGRG-------RAAYVASK------ 157

Query: 229 GAELYL------KYADKGVDVSVVCPGWCYTNLF-----RHAD 260
           GA   L       +A  G+ V+ V PG   T  F     RHAD
Sbjct: 158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD 200

Length = 252

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 8e-19
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 11/208 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVL 111
           +EGKV ++TGA+SG+G   A+ LA+  A VVL  R +    E L++L+ E+  + G   +
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV----ERLKELRAEIEAEGGAAHV 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           + L++  + SIK    +   +   I +L+NN+GVS   K    T   ++  F  N  G F
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122

Query: 172 LLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
            +   + +R I +    G++      I+  ++ G +   Q G     YC SK    +   
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG----LYCMSKAAVVHMTR 178

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRH 258
            + L++   G++V+ +CPG+  T +  H
Sbjct: 179 AMALEWGRHGINVNAICPGYIDTEINHH 206

Length = 258

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 84.6 bits (210), Expect = 9e-19
 Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 31/213 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV +ITGA+SGIG  TA+ LA+  A VVL  R     +E LE L  E+  G  + + 
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARR----EERLEALADEIGAGAALALA 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L++    +++   + + +++ +I +L+NNAG+++         + ++     N  G    
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNG 119

Query: 174 TNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH----SNPAYCNSKLMN 225
           T      ++ER    +I   S                     G         Y  +K   
Sbjct: 120 TRAVLPGMVERKSGHIINLGS-------------------IAGRYPYPGGAVYGATKAAV 160

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
             F   L  + A  G+ V+V+ PG   T  F  
Sbjct: 161 RAFSLGLRQELAGTGIRVTVISPGLVETTEFST 193

Length = 246

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 86.4 bits (214), Expect = 3e-18
 Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 28/260 (10%)

Query: 5   ILSFFRDNDKLLLHSLLYTTTI----------TLSALVISRYFKSRSW----SKLKASPF 50
           ++SF +D +   +    Y   I             +L     F    W    +KL+  P 
Sbjct: 349 MISFGKDKETARVAREFYVNAINVMRGAEAVSEYVSLPEQEAFDIEYWPLEEAKLRRMPK 408

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
            K +  +V  +TG   GIG ETA+ LA   A VVL   ++   +    ++  +   G+ V
Sbjct: 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAV 468

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHV 168
            +++++    ++K    +V   Y  + +++NNAG++   P +E  TT + ++++  I   
Sbjct: 469 ALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEE--TTLQEWQLNLDILAT 526

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           G+FL+      R  +   +G +++             K  V  G +  AY  +K    + 
Sbjct: 527 GYFLVAREAF-RQMREQGLGGNIV---------FIASKNAVYAGKNASAYSAAKAAEAHL 576

Query: 229 GAELYLKYADKGVDVSVVCP 248
              L  +    G+ V+ V P
Sbjct: 577 ARCLAAEGGTYGIRVNTVNP 596

Length = 676

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 51/234 (21%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA 117
           + +ITG  SGIG   A E AK  A VV+   +    +E    ++K    G++   + +++
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKA--GGKVHYYKCDVS 58

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLLT-N 175
             + +   AK + K+   + +LINNAGV V  K+ L    E  E  F +N + HF  T  
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 176 LLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA----YCNSKLMNYY 227
            L + +++    +V + S                      G  +PA    YC SK     
Sbjct: 118 FLPDMLERNHGHIVTIASVA--------------------GLISPAGLADYCASK----- 152

Query: 228 FGA---------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPI 272
             A         EL   Y   G+  ++VCP +  T +F+        + ++ PI
Sbjct: 153 AAAVGFHESLRLEL-KAYGKPGIKTTLVCPYFINTGMFQGVKTP---RPLLAPI 202

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 82.4 bits (204), Expect = 9e-18
 Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 53/246 (21%)

Query: 57  KVCIITGANSGIGYETAKELAKLKA-----TVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           KV ++TGANSG+G    + L          T++L CR++ R + A   L     D ++V 
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 112 --MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV----------------PIKEK- 152
             + ++L++  S+   AK + K+YP++  L  NAG+                  P+    
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVT 121

Query: 153 ----LTTKEGYEVH------------FGINHVGHFLLTN----LLIERIQ--KVVIVGSS 190
                   EG                F  N  GH+ L      LL       +++   S 
Sbjct: 122 NPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSL 181

Query: 191 LMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGW 250
                    +++   KG          Y +SK +       L  K+   GV   VV PG 
Sbjct: 182 NASPKYFSLEDIQHLKG-------PAPYSSSKYLVDLLSLALNRKFNKLGVYSYVVHPGI 234

Query: 251 CYTNLF 256
           C TNL 
Sbjct: 235 CTTNLT 240

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 25/199 (12%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV ++TGA+ GIG   A  LA   A V +  RS     E +E++K     G    +E ++
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADV 58

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINHVGHFLL 173
           +  ++++   + V  ++  + +L+NNAG++   ++ L    ++E ++    +N  G F +
Sbjct: 59  SDREAVEALVEKVEAEFGPVDILVNNAGIT---RDNLLMRMSEEDWDAVINVNLTGVFNV 115

Query: 174 TNLLIERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           T        + VI   +++ R +   I+  ++ G  G    G +N  Y  SK     F  
Sbjct: 116 T--------QAVI--RAMIKRRSGRIINISSVVGLIG--NPGQAN--YAASKAGVIGFTK 161

Query: 231 ELYLKYADKGVDVSVVCPG 249
            L  + A +G+ V+ V PG
Sbjct: 162 SLAKELASRGITVNAVAPG 180

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 9/139 (6%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQD--GQIVLME 113
              +ITG   G+G   A+ LA   A  ++   R          +L  E++    ++ +  
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPA--PGAAELVAELEALGAEVTVAA 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
            ++A  D++      +      +  +++NAGV    P++E   T E +E        G +
Sbjct: 59  CDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEE--LTPERFERVLAPKVTGAW 116

Query: 172 LLTNLLIERIQKVVIVGSS 190
            L  L  +      ++ SS
Sbjct: 117 NLHELTRDLDLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 32/223 (14%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
            GKV ++TGA+ GIG   AK LA+  A+VV+   S    + A E++  E++   G+ + +
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYAS---SKAAAEEVVAEIEAAGGKAIAV 58

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGH 170
           + +++    +        K +  + +L+NNAGV +  PI E  T++E ++  F +N  G 
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAE--TSEEEFDRMFTVNTKGA 116

Query: 171 FLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           F +     +R++   +++ + SSL    T ++    G K  V+      A+         
Sbjct: 117 FFVLQEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVE------AFTRV------ 164

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLFR----HADIKFYQK 266
              EL      +G+ V+ V PG   T++F        ++ Y K
Sbjct: 165 LAKEL----GGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAK 203

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 25/202 (12%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME- 113
           GK  +ITG +SGIG   AKEL K  A V++  RS  + +EA+E+++ E    GQ V    
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKE---GYEV-HFGINHV 168
            +L+ ++ ++      +++     +++N AG+S+P   E LT +E   G +V +FG  +V
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK-GHSNPAYCNSKLMNYY 227
            H +L  +  +R   +V V S                   V   G+S  AYC SK     
Sbjct: 121 AHAVLPLMKEQRPGHIVFVSSQA---------------ALVGIYGYS--AYCPSKFALRG 163

Query: 228 FGAELYLKYADKGVDVSVVCPG 249
               L  +     + VSVV P 
Sbjct: 164 LAESLRQELKPYNIRVSVVYPP 185

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 78.3 bits (194), Expect = 1e-16
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA   A VV+   S   G EAL         G+ + ++
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-LGGKALAVQ 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            +++  +S++        ++  + +L+NNAG+
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGI 93

Length = 248

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 33/214 (15%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
           GKV IITGA+ GIG   A  LA+  A +VL  R+    +  L  L +E+ D  G+ +++ 
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARN----ETRLASLAQELADHGGEALVVP 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVG--- 169
            +++  ++ +   +  + ++  I +L+NNAG+++  + ++LT    +E    +N++G   
Sbjct: 57  TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVY 116

Query: 170 --HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSK-LMN 225
             H  L +L   R Q VV+  SSL               G       S   Y  SK  ++
Sbjct: 117 CTHAALPHLKASRGQIVVV--SSL--------------AGLTGVPTRS--GYAASKHALH 158

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
            +F + L ++ AD GV V+VVCPG+  T++ + A
Sbjct: 159 GFFDS-LRIELADDGVAVTVVCPGFVATDIRKRA 191

Length = 263

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 29/197 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G   +ITG  SGIG   A++  +   TV++  R     +E L + KKE+    I  + 
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKEL--PNIHTIV 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI--KEKLTTKEGYEVHFGINHVGHF 171
           L++   +S++  A+ ++ +YP + +LINNAG+  PI  ++  +  +  +     N +G  
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            L    +  ++K     +V V S L                FV    +NP YC +K   +
Sbjct: 117 RLIKAFLPHLKKQPEATIVNVSSGL---------------AFVPMA-ANPVYCATKAALH 160

Query: 227 YFGAELYLKYADKGVDV 243
            +   L  +  D GV+V
Sbjct: 161 SYTLALRHQLKDTGVEV 177

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 77.0 bits (190), Expect = 4e-16
 Identities = 63/267 (23%), Positives = 96/267 (35%), Gaps = 46/267 (17%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV IITG  SGIG  TAK L K  A V +          A  +L+      +   ++ ++
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAIL--DRNENPGAAAELQAINPKVKATFVQCDV 58

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
            S++ +    K  ++++ ++ +LINNAG+       L  K               +  NL
Sbjct: 59  TSWEQLAAAFKKAIEKFGRVDILINNAGI-------LDEKSYLFAGKLPPPWEKTIDVNL 111

Query: 177 LIERIQKVVIVGSSL----MDRGTIDFDNLNGEKGFV---------QKGHSNPAYCNSK- 222
                   VI  + L    MD+      N  G+ G +               P Y  SK 
Sbjct: 112 ------TGVINTTYLALHYMDK------NKGGKGGVIVNIGSVAGLYPAPQFPVYSASKH 159

Query: 223 -LMNYY--FGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMM-VVI 278
            ++ +       L  K    GV V+ +CPG+  T L      K  + +   P     VV 
Sbjct: 160 GVVGFTRSLADLLEYKT---GVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQSPEVVA 216

Query: 279 VGSSLMDRGTIDFDNLNGEKGFVQKGH 305
                +     D D  NG    V  G 
Sbjct: 217 KA---IVYLIED-DEKNGAIWIVDGGK 239

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TGA SGIG E A  LAK  A VV+   +      A E L+K    G+ + + 
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--AGGKAIGVA 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +++   ++I       ++ +  + +L+NNAG+    PI E   T E ++    I   G F
Sbjct: 60  MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPI-EDFPT-EKWKKMIAIMLDGAF 117

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           L T   +  ++      ++ + S            ++G  G   K     AY ++K    
Sbjct: 118 LTTKAALPIMKAQGGGRIINMAS------------VHGLVGSAGKA----AYVSAKHGLI 161

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                + L+ A  GV V+ +CPG+  T L R
Sbjct: 162 GLTKVVALEGATHGVTVNAICPGYVDTPLVR 192

Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 1e-15
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 6/97 (6%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIV 110
           P+ GKV +ITGA+SGIG  TA ++A+  ATV L    + R  EAL++L  E+  + G   
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFL----VARNGEALDELVAEIRAKGGTAH 423

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
               +L    ++ +  K+++ ++  +  L+NNAG S+
Sbjct: 424 AYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSI 460

Length = 657

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 24/90 (26%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 59  CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMELNL 116
            ++TGA+ GIG   A +LAK  A V++  RS    +E  E++ +E++    + + +  ++
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRS---SEEGAEEVVEELKAYGVKALGVVCDV 57

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
           +  + +K   + + ++   I +L+NNAG++
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGIT 87

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 74.8 bits (184), Expect = 2e-15
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           ++ ++TG   GIG    + LAK    V   C       EA  + ++        ++E ++
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQ-EQGALGFDFRVVEGDV 59

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
           +SF+S K     V  +   I VL+NNAG++     K  T E +      N    F +T  
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQP 119

Query: 177 LIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
           +I+           + +RG    I+  ++NG+KG  Q G +N  Y  +K     F   L 
Sbjct: 120 VID----------GMRERGWGRIINISSVNGQKG--QFGQTN--YSAAKAGMIGFTKALA 165

Query: 234 LKYADKGVDVSVVCPGWCYTNL 255
            + A KGV V+ + PG+  T++
Sbjct: 166 QEGATKGVTVNTISPGYIATDM 187

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 76.2 bits (188), Expect = 5e-15
 Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 56/230 (24%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
            P  GK+ ++TGA SGIG ETA   A+  A VV    S I  + A E+  + ++      
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVA---SDID-EAAAERTAELIRAAGAVA 366

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
               ++++  D+++ FA+ V  ++    +++NNAG+ +     +  T+ E ++    +N 
Sbjct: 367 HAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLD--TSAEDWDRVLDVNL 424

Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH-------------- 213
            G               VI G  L  R  +       E+G    GH              
Sbjct: 425 WG---------------VIHGCRLFGRQMV-------ERG--TGGHIVNVASAAAYAPSR 460

Query: 214 SNPAYCNSKLMNYYFG----AELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
           S PAY  SK           AEL    A  G+ V+ +CPG+  TN+    
Sbjct: 461 SLPAYATSKAAVLMLSECLRAEL----AAAGIGVTAICPGFVDTNIVATT 506

Length = 582

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 73.5 bits (181), Expect = 6e-15
 Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 27/218 (12%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL-MEL 114
           GKV ++TGA+ GIG+  A  LA+  A +V+  R+  + +EA + ++KE   G        
Sbjct: 5   GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE---GVEATAFTC 61

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +++  ++IK   + + + + KI +L+NNAG+      +   +  +     +N  G F ++
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVS 121

Query: 175 NLLIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYYFG 229
                       V   ++ +G    I+  +L  E G        PAY  SK  +      
Sbjct: 122 QA----------VARHMIKQGHGKIINICSLLSELGGP----PVPAYAASKGGVAG--LT 165

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQ 265
             L  ++A  G+ V+ + PG+  T +     AD +F  
Sbjct: 166 KALATEWARHGIQVNAIAPGYFATEMTEAVVADPEFND 203

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 73.6 bits (181), Expect = 7e-15
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 23/208 (11%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           GKV ++TG+ SGIG   A+ LA   A +VL G        EA+          +++    
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAE-IEAVRAGLAAKHGVKVLYHGA 60

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHFL 172
           +L+   +I++      +Q+  + +L+NNAG+    PI++  T  E ++    +N    F 
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPT--EKWDAIIALNLSAVFH 118

Query: 173 LTNLLIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            T L +  ++K          +G    I+  +++G      K     AY  +K       
Sbjct: 119 TTRLALPHMKK----------QGWGRIINIASVHGLVASANKS----AYVAAKHGVVGLT 164

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
             + L+ A  GV  + +CPGW  T L  
Sbjct: 165 KVVALETAGTGVTCNAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 73.2 bits (180), Expect = 8e-15
 Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 23/207 (11%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
           GK  ++TGA SGIG   A+ LA   A VV+       G+E  E   K   D  G ++ + 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVND----FGEEGAEAAAKVAGDAGGSVIYLP 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            ++   D I +       ++  + +L+NNAG+    PI+E     E ++    +     F
Sbjct: 57  ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP--EDWDRIIAVMLTSAF 114

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
                      +  +        G I +  + +G      K     AY  +K        
Sbjct: 115 HTI--------RAALPHMKKQGWGRIINIASAHGLVASPFKS----AYVAAKHGLIGLTK 162

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFR 257
            L L+ A+ G+ V+ +CPG+  T L  
Sbjct: 163 VLALEVAEHGITVNAICPGYVRTPLVE 189

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 73.3 bits (180), Expect = 9e-15
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 25/206 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVL 111
           + GK  +ITGA  GIG   A+  A+  A ++L   S       +EKL  E+  +  +   
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDIS-----PEIEKLADELCGRGHRCTA 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           +  ++    S+    K   ++  +I +L+NNAGV         + E  + H  IN  G +
Sbjct: 59  VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVW 118

Query: 172 LLTNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            +T      +I R    +++ SS+   G +  D   GE           AY  +K     
Sbjct: 119 NVTKAVLPEMIARKDGRIVMMSSVT--GDMVAD--PGET----------AYALTKAAIVG 164

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYT 253
               L ++YA  G+ V+ +CPG+  T
Sbjct: 165 LTKSLAVEYAQSGIRVNAICPGYVRT 190

Length = 263

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 72.8 bits (179), Expect = 9e-15
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 33/178 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             G   +ITG  SGIG   AK   +L  TV++  R+     E L + K E  +  I    
Sbjct: 3   TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNE----ERLAEAKAENPE--IHTEV 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI----KEKLTTKEGYEVHFGINHVG 169
            ++A  DS +   + + K+YP ++VLINNAG+         E L      E+    N + 
Sbjct: 57  CDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIA--TNLLA 114

Query: 170 HFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
              LT LL+  + +     ++ V S L                FV    S P YC +K
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGL---------------AFVPMA-STPVYCATK 156

Length = 245

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 72.9 bits (180), Expect = 1e-14
 Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 49/214 (22%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GK  ++TGA+ GIG   A  LA   A VV+   +    +EA E L  E++   G+  +
Sbjct: 3   LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN----EEAAEALAAELRAAGGEARV 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVG 169
           +  +++   +++   +  ++ +  + +L+NNAG++    +  +++ ++   V   +N  G
Sbjct: 59  LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALL-PRMSEEDWDRV-IDVNLTG 116

Query: 170 HFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            F +    +  + K     +V + S            ++G  G   + +    Y  +K  
Sbjct: 117 TFNVVRAALPPMIKARYGRIVNISS------------VSGVTGNPGQTN----YSAAK-- 158

Query: 225 NYYFG---------AELYLKYADKGVDVSVVCPG 249
               G          EL    A +G+ V+ V PG
Sbjct: 159 ---AGVIGFTKALALEL----ASRGITVNAVAPG 185

Length = 246

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           KP+  +V +ITGA++G+G  TA+  A+  A VVL    + RG+E LE L  E++   G+ 
Sbjct: 4   KPIGRQVVVITGASAGVGRATARAFARRGAKVVL----LARGEEGLEALAAEIRAAGGEA 59

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
           + +  ++A  ++++  A    ++   I   +NNA V+V  P ++   T E +     + +
Sbjct: 60  LAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFED--VTPEEFRRVTEVTY 117

Query: 168 VG--HFLLTNL--LIERIQKVVI-VGSSLMDRG 195
           +G  H  L  L  +  R +  +I VGS+L  R 
Sbjct: 118 LGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS 150

Length = 334

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 6/149 (4%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + +EG+V ++TGA  GIG   A  LA   A V++            E +  E   G+   
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV--EAAGGKARA 59

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
            ++++    ++K      ++ + ++ +L+ NAG+           E +E    +N  G F
Sbjct: 60  RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTF 119

Query: 172 LLTNL----LIERIQKVVIVGSSLMDRGT 196
           LLT      LI      +++ SS+     
Sbjct: 120 LLTQAALPALIRAGGGRIVLTSSVAGPRV 148

Length = 251

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 72.0 bits (176), Expect = 2e-14
 Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 20/208 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLM 112
           M  ++  +TG   GIG    + L K    VV GC  +  R  + LE  K    D   +  
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD--FIAS 58

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           E N+  +DS K     V  +  +I VL+NNAG++  +  +  T+E +      N      
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTN------ 112

Query: 173 LTNLLIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           LT+L    + K VI G  +++RG    I+  ++NG+KG  Q G +N  Y  +K   + F 
Sbjct: 113 LTSLF--NVTKQVIDG--MVERGWGRIINISSVNGQKG--QFGQTN--YSTAKAGIHGFT 164

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
             L  + A KGV V+ V PG+  T++ +
Sbjct: 165 MSLAQEVATKGVTVNTVSPGYIGTDMVK 192

Length = 246

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 57/223 (25%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-----QIV 110
           G   ++TGA  GIG   A+ELAK    V+L    + R QE L+ + KE+++      + +
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVIL----ISRTQEKLDAVAKEIEEKYGVETKTI 56

Query: 111 LMELNLAS--FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
             + +     ++ I+   + +      I +L+NN G+S  I E        E        
Sbjct: 57  AADFSAGDDIYERIEKELEGL-----DIGILVNNVGISHSIPEYFLETPEDE-------- 103

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH-----------SNP- 216
                    ++ I  V ++ +  M R  +         G V++               P 
Sbjct: 104 ---------LQDIINVNVMATLKMTRLIL--------PGMVKRKKGAIVNISSFAGLIPT 146

Query: 217 ----AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                Y  SK    +F   LY +Y  +G+DV  + P    T +
Sbjct: 147 PLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 73.3 bits (181), Expect = 4e-14
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 33/245 (13%)

Query: 21  LYTTTIT--LSALVISRY--------FKSRSWS----KLKASPFYKPMEGKVCIITGANS 66
           +Y   I     A  + RY        F    WS    KL+  P  KP+ GKV ++TGA  
Sbjct: 373 IYENAINVMRGAEAVGRYEPLSEQEAFDIEYWSLEQAKLQRMPKPKPLAGKVALVTGAAG 432

Query: 67  GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL-MELNLASFDSIKNF 125
           GIG  TAK LA   A VVL        +EA E    E+      L +  ++    +++  
Sbjct: 433 GIGKATAKRLAAEGACVVLADLD----EEAAEAAAAELGGPDRALGVACDVTDEAAVQAA 488

Query: 126 AKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQK 183
            +     +  + ++++NAG+++  PI+E  T+ E +   F +N  GHFL+      RI K
Sbjct: 489 FEEAALAFGGVDIVVSNAGIAISGPIEE--TSDEDWRRSFDVNATGHFLVAR-EAVRIMK 545

Query: 184 VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDV 243
              +G S++             K  V  G +  AY  +K    +   +L L+    G+ V
Sbjct: 546 AQGLGGSIV---------FIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596

Query: 244 SVVCP 248
           + V P
Sbjct: 597 NGVNP 601

Length = 681

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 66/222 (29%), Positives = 83/222 (37%), Gaps = 55/222 (24%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
            + GKV  ITG   GIG  TA+ LA L A V +G       +E   +L      G +V  
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVGG 55

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            L++    S   F   V      I VL+NNAGV +P                   VG FL
Sbjct: 56  PLDVTDPASFAAFLDAVEADLGPIDVLVNNAGV-MP-------------------VGPFL 95

Query: 173 LTNL-LIERIQKV----VIVGSSLMDRGTIDFDNLNGEKGFVQKGH-SNPA--------- 217
                +  RI  V    VI+GS L     +        +G   +GH  N A         
Sbjct: 96  DEPDAVTRRILDVNVYGVILGSKLAAPRMV-------PRG---RGHVVNVASLAGKIPVP 145

Query: 218 ----YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
               YC SK     F     L+    GV VSVV P +  T L
Sbjct: 146 GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL 187

Length = 273

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 71.1 bits (175), Expect = 4e-14
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV  ITG  +GIG   AK  A+L A+V +  R     + A E++      G+   ++
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA-TGGRAHPIQ 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHF 171
            ++   ++++      +K++ KI +LINNA  +   P  E L+   G++    I+  G F
Sbjct: 60  CDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPA-ESLSPN-GFKTVIDIDLNGTF 117

Query: 172 LLT----NLLIERIQKVVIV 187
             T      LIE      I+
Sbjct: 118 NTTKAVGKRLIEAKHGGSIL 137

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 71.0 bits (174), Expect = 5e-14
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 13/195 (6%)

Query: 61  ITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFD 120
           ITG++ G+G   A+ L      VVL  RS  R  +A    K        VL+  +L+S  
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADA----KAACPGAAGVLIG-DLSSLA 66

Query: 121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER 180
             +  A  V     +   +I+NAG+      + T   G      +N +  ++LT  LI R
Sbjct: 67  ETRKLADQV-NAIGRFDAVIHNAGILSG-PNRKTPDTGIPAMVAVNVLAPYVLTA-LIRR 123

Query: 181 IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKG 240
            ++++ + S +   G    D+++      +  + +PAY +SKL      A +  ++ D  
Sbjct: 124 PKRLIYLSSGMHRGGNASLDDIDWFN---RGENDSPAYSDSKLHVLTLAAAVARRWKD-- 178

Query: 241 VDVSVVCPGWCYTNL 255
           V  + V PGW  T +
Sbjct: 179 VSSNAVHPGWVPTKM 193

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
            + G+V ++TGA  G+G   A  LA+  A VV+  RS    +EA E+L + V+    +  
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRS---DEEAAEELVEAVEALGRRAQ 59

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            ++ ++    +++      ++++ +I +L+NNAG+
Sbjct: 60  AVQADVTDKAALEAAVAAAVERFGRIDILVNNAGI 94

Length = 249

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 68.6 bits (168), Expect = 3e-13
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 29/211 (13%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMELN 115
           V +ITGA+SGIG  TA   A+  A VVL  RS     EAL +L +EV++  G+ + +  +
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARS----AEALHELAREVRELGGEAIAVVAD 57

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           +A    ++  A   ++++ +I   +NNAGV+V  + +  T E +   F +N++GH   T 
Sbjct: 58  VADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTL 117

Query: 176 LLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYYF 228
             +  +++     ++ VGS L  R       L              AY  SK  +  +  
Sbjct: 118 AALPHLRRRGGGALINVGSLLGYRSAP----LQA------------AYSASKHAVRGFTE 161

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                L +    + V++V P    T  F HA
Sbjct: 162 SLRAELAHDGAPISVTLVQPTAMNTPFFGHA 192

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 12/136 (8%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
            + GK  ++TGA+SGIG   A++ A+  ATVV     + R ++ L+ +   +    G  +
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVA----VARREDLLDAVADRITRAGGDAM 92

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHV 168
            +  +L+  D++     +V K+   + +LINNAG S+  P+ E L      E    +N+ 
Sbjct: 93  AVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYY 152

Query: 169 GHFLLTNLL----IER 180
               L   L    +ER
Sbjct: 153 APLRLIRGLAPGMLER 168

Length = 293

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 34/213 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ-IVLM 112
           M  K+ I+TGA+SG G  T  ELAK    V+   R+  + QE L     ++   Q I + 
Sbjct: 1   MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEK-QENLLSQATQLNLQQNIKVQ 59

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGH 170
           +L++   +SI NF   V+K+  +I +L+NNAG +    ++E     E Y   F  N  G 
Sbjct: 60  QLDVTDQNSIHNFQL-VLKEIGRIDLLVNNAGYANGGFVEE--IPVEEYRKQFETNVFGA 116

Query: 171 FLLTNLLI-----ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA---YCNSK 222
             +T  ++     ++  K++ + S            ++G  GF       P    Y +SK
Sbjct: 117 ISVTQAVLPYMRKQKSGKIINISS------------ISGRVGF-------PGLSPYVSSK 157

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                F   L L+    G+DV+++ PG   TN+
Sbjct: 158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 67.8 bits (166), Expect = 6e-13
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 29/205 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GKV ++TGA+SGIG   A  LA   A VV+  RS    ++A E++ +E++   G+ + 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRS---KEDAAEEVVEEIKAVGGKAIA 57

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVG 169
           ++ +++  + +    ++ +K++  + +L+NNAG+       E   T E +     +N  G
Sbjct: 58  VQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHE--MTLEDWNKVIDVNLTG 115

Query: 170 HFL-----LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            FL     +      +I+  +I  SS+ ++                 GH N  Y  SK  
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIINMSSVHEK-------------IPWPGHVN--YAASKGG 160

Query: 225 NYYFGAELYLKYADKGVDVSVVCPG 249
                  L  +YA KG+ V+ + PG
Sbjct: 161 VKMMTKTLAQEYAPKGIRVNAIAPG 185

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 7e-13
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMELNLA 117
           +ITGA+SGIG  TA   AK    + L  RS    Q+ALE L  E++    +     ++L+
Sbjct: 10  LITGASSGIGKATALAFAKAGWDLALVARS----QDALEALAAELRSTGVKAAAYSIDLS 65

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           + ++I      +++Q+    VLINNAG+
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGM 93

Length = 241

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 67.6 bits (165), Expect = 7e-13
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 30/219 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GKV ++TGA+SGIG  TA+ LA   A V +  R      + LE L  E++   G+ ++
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARR----VDRLEALADELEAEGGKALV 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTT--KEGYEVHF-GIN 166
           +EL++     +    +  ++   ++ +L+NNAG+ +  P+++  TT      + +  G+ 
Sbjct: 57  LELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 116

Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           +  H  L + L+     +V + SS+  R                   ++  Y  +K    
Sbjct: 117 YTTHAALPHHLLRNKGTIVNI-SSVAGRVA---------------VRNSAVYNATKFGVN 160

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNL---FRHADIK 262
            F   L  +  ++GV V V+ PG   T L     H   K
Sbjct: 161 AFSEGLRQEVTERGVRVVVIEPGTVDTELRDHITHTITK 199

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 7e-13
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  ++TGA  G+G   A+ LA+  ATV          +E    L+     G+   + 
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA--AGGRAHAIA 62

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            +LA   S++ F          +  L+NNAG+
Sbjct: 63  ADLADPASVQRFFDAAAAALGGLDGLVNNAGI 94

Length = 250

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 8e-13
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
            + GKV ++TG  SGIG+  A+  A   A V L  RS     E + ++  ++  G    +
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-----EDVAEVAAQLLGGNAKGL 66

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             +++   S++     V+  + +I +L+N+AGV++    +  ++E ++    IN  G FL
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFL 126

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQ-KGHSNPAYCNSKLMNYYFGAE 231
           +             VG  ++  G     NL  + G V  + H   AYC SK         
Sbjct: 127 MAQ----------AVGRHMIAAGGGKIVNLASQAGVVALERHV--AYCASKAGVVGMTKV 174

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHA 259
           L L++   G+ V+ + P    T L + A
Sbjct: 175 LALEWGPYGITVNAISPTVVLTELGKKA 202

Length = 255

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 9e-13
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 36/212 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  +ITG  SGIG ETA++     A V +  R       +LE  + E+ +  +V+  
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD----PASLEAARAELGESALVIRA 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG-H 170
            +     + K  A+ + + + ++  +  NAGV+   P+++    +  ++  F  N  G +
Sbjct: 60  -DAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLED--WDEAMFDRSFNTNVKGPY 116

Query: 171 FLLTNLL--IERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL----M 224
           FL+  LL  +     +V+ GS            +N   G       +  Y  SK     +
Sbjct: 117 FLIQALLPLLANPASIVLNGS------------INAHIGMPN----SSVYAASKAALLSL 160

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
                 EL      +G+ V+ V PG   T L+
Sbjct: 161 AKTLSGEL----LPRGIRVNAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 19/196 (9%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL-MEL 114
           GKV ++TG  SGIG   AK LA   A VV+         E  EK+ +  Q G   L ++ 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVV----ADIDPEIAEKVAEAAQGGPRALGVQC 56

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFL 172
           ++ S   +++  +  + ++  + ++++NAG+  S PI E  T+ E +     IN  GHFL
Sbjct: 57  DVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAE--TSLEDWNRSMDINLTGHFL 114

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           ++     RI K   +G +++          N  K  V  G +  AY  +K    +    L
Sbjct: 115 VSREAF-RIMKSQGIGGNIV---------FNASKNAVAPGPNAAAYSAAKAAEAHLARCL 164

Query: 233 YLKYADKGVDVSVVCP 248
            L+  + G+ V+ V P
Sbjct: 165 ALEGGEDGIRVNTVNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 23/203 (11%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIVLME 113
           K  +ITGA+SGIG  TA+  AK  A ++L  R      E L++L  E+      +++ ++
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRR----AERLQELADELGAKFPVKVLPLQ 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV---PIKEKLTTKEGYEVHFGINHVGH 170
           L+++  +SI+   +N+ +++  I +L+NNAG+++   P +E     E +E     N  G 
Sbjct: 57  LDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQE--ADLEDWETMIDTNVKGL 114

Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
             +T L++  +           ++G I   NL    G       N  YC +K     F  
Sbjct: 115 LNVTRLILPIMIAR--------NQGHI--INLGSIAGRYPYAGGN-VYCATKAAVRQFSL 163

Query: 231 ELYLKYADKGVDVSVVCPGWCYT 253
            L       G+ V+ + PG   T
Sbjct: 164 NLRKDLIGTGIRVTNIEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 45/211 (21%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL- 114
           GKV ++T A+SGIG   A+ LA+  A V +  R+    +E LE+   E++ G   ++ + 
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARN----RENLERAASELRAGGAGVLAVV 56

Query: 115 -NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK-----EGYEVHFGINHV 168
            +L   + I    +     + ++ +L+NNAG   P             E +++      +
Sbjct: 57  ADLTDPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKL----L 111

Query: 169 GHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLN----GEKGFVQKGHSNPAYC 219
               +   ++  +++     +V + S  +     +    N    G  G V K  S     
Sbjct: 112 SVIRIVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLV-KTLSR---- 166

Query: 220 NSKLMNYYFGAELYLKYADKGVDVSVVCPGW 250
                          + A  GV V+ V PG+
Sbjct: 167 ---------------ELAPDGVTVNSVLPGY 182

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 67.2 bits (164), Expect = 3e-12
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 31/210 (14%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           + +V ++TGA  GIG    +  A+    VV+  R++ R +E  + L  +        + +
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDH-----HALAM 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVGHFL 172
           +++    I+   + + +++ +I VL+NNAGV+ P       TT E +     IN  G +L
Sbjct: 59  DVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYL 118

Query: 173 LT----NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AYCNSKLMN 225
           +      L+IE+     IV             N+    G V    + P   AY  SK   
Sbjct: 119 VAREALRLMIEQGHGAAIV-------------NVASGAGLV----ALPKRTAYSASKAAV 161

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                 L  ++A KG+ V+ V PG+  T +
Sbjct: 162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 27/202 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV +ITG + GIG+  A+ L      V +  R     +EA  +L      G ++ + 
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN---KGNVLGLA 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            ++     ++     ++  +  + VLI NAGV    P++E LT +E   V    N  G F
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEE-LTPEEWRLV-IDTNLTGAF 118

Query: 172 LLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
                 +  +++    ++ + S            L G   F   G    AY  SK     
Sbjct: 119 YTIKAAVPALKRGGGYIINISS------------LAG-TNFFAGG---AAYNASKFGLVG 162

Query: 228 FGAELYLKYADKGVDVSVVCPG 249
           F     L     G+ VS + PG
Sbjct: 163 FSEAAMLDLRQYGIKVSTIMPG 184

Length = 237

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 65.2 bits (159), Expect = 4e-12
 Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 18/200 (9%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIVLM 112
           G+V ++TGA+ GIG   A+ L +     V+GC    R  + +E L  E Q      +   
Sbjct: 6   GRVALVTGASVGIGAAVARALVQ-HGMKVVGC---ARRVDKIEALAAECQSAGYPTLFPY 61

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           + +L++ + I +    +  Q+  + V INNAG++ P        EG++  F +N +   +
Sbjct: 62  QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSI 121

Query: 173 LTNLLIERIQKVVIVGSSLMDRG-TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF--G 229
            T    + +++  +      D G  I+ ++++G +  V        Y  +K        G
Sbjct: 122 CTREAYQSMKERNV------DDGHIININSMSGHR--VPPVSVFHFYAATKHAVTALTEG 173

Query: 230 AELYLKYADKGVDVSVVCPG 249
               L+ A   +  + + PG
Sbjct: 174 LRQELREAKTHIRATSISPG 193

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 5e-12
 Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQ 108
           Y  +EGKV +ITG ++G+G   A    K KA VV+  RS    +E    + +E++   G+
Sbjct: 2   YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS---DEEEANDVAEEIKKAGGE 58

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
            + ++ ++     + N  +  +K++  + V+INNAG+   +     + E +      N  
Sbjct: 59  AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLT 118

Query: 169 GHFL 172
           G FL
Sbjct: 119 GAFL 122

Length = 261

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 35/220 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++ KV +ITG    +G   A+ LA+  A V      + R QE  +K+ KE+    G+ + 
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAA----LGRNQEKGDKVAKEITALGGRAIA 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP----IKEKLT----------TKE 157
           +  ++    S++   + ++ Q+  + +LIN AG + P      E              +E
Sbjct: 59  LAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEE 118

Query: 158 GYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLM--DRGTIDFDNLNGEKGFVQKGHSN 215
           G+E  F +N  G FL +           + G  ++    G+I   N++    F       
Sbjct: 119 GWEFVFDLNLNGSFLPSQ----------VFGKDMLEQKGGSI--INISSMNAFSPLTKV- 165

Query: 216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           PAY  +K     F   L +++A  GV V+ + PG+  T  
Sbjct: 166 PAYSAAKAAVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 7e-12
 Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 27/200 (13%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVLME 113
           + K  ++TGA+ GIG   A+ LA   A ++L  R+     E LE L   +   G+   + 
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRWVV 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +L S    +       ++   I+VLINNAGV+     +    E  E    +N      L
Sbjct: 60  ADLTSEAGREAVLA-RAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 174 TNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           T  L+  ++      VV VGS+    G+I      G  G+        +YC SK     F
Sbjct: 119 TRALLPLLRAQPSAMVVNVGSTF---GSI------GYPGYA-------SYCASKFALRGF 162

Query: 229 GAELYLKYADKGVDVSVVCP 248
              L  + AD GV V  + P
Sbjct: 163 SEALRRELADTGVRVLYLAP 182

Length = 263

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 17/197 (8%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLME 113
            KV IITGA  GIG   A+ LA     +VL   + +  +EA +   +E+       V + 
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVL---ADLNLEEAAKSTIQEISEAGYNAVAVG 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT-TKEGYEVHFGINHVGHFL 172
            ++   D ++      ++++    V++NNAG+  PI   LT T+E  +  + +N  G   
Sbjct: 59  ADVTDKDDVEALIDQAVEKFGSFDVMVNNAGI-APITPLLTITEEDLKKVYAVNVFGVLF 117

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
                  + +K+   G        I+  ++ G +GF   G     Y  SK          
Sbjct: 118 GIQAAARQFKKLGHGGK------IINASSIAGVQGFPNLGA----YSASKFAVRGLTQTA 167

Query: 233 YLKYADKGVDVSVVCPG 249
             + A KG+ V+   PG
Sbjct: 168 AQELAPKGITVNAYAPG 184

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVL- 111
           +EGK  ++TG   GIGY   +ELA L A V    R+    Q+ L++   E ++ G  V  
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARN----QKELDECLTEWREKGFKVEG 59

Query: 112 MELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
              +++S    +     V   +  K+++L+NNAG ++  + K  T+E Y +    N    
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAA 119

Query: 171 FLLTNL---LIERIQK--VVIVGS 189
           + L+ L   L++      +V + S
Sbjct: 120 YHLSRLAHPLLKASGNGNIVFISS 143

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 30/206 (14%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV I+TG   G+G   A+ L    A VVL       GQ A  +L    +        L+
Sbjct: 5   GKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAAR-----FFHLD 59

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           +   D          + + ++ VL+NNAG+      + TT E +     IN  G FL T 
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 176 LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFG----- 229
            +I  +++           G+I   N++  +G V  G     AY  SK            
Sbjct: 120 AVIPPMKEA--------GGGSI--INMSSIEGLV--GDPALAAYNASK-----GAVRGLT 162

Query: 230 --AELYLKYADKGVDVSVVCPGWCYT 253
             A L       G+ V+ V PG+ YT
Sbjct: 163 KSAALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK+ ++TG + GIG   A+   +  A V++  R      +A E+L      G+ + + 
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELS---AYGECIAIP 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHF 171
            +L+S + I+     V ++  ++ VL+NNAG +   P++     + G++    IN    F
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEA--FPESGWDKVMDINVKSVF 118

Query: 172 LLTNLLIERIQKVVIVG--SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            LT  L+  ++        + +++ G+I         G V  G  N +Y  SK   +   
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGSIA--------GIVVSGLENYSYGASKAAVHQLT 170

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
            +L  + A + + V+ + PG   + +    
Sbjct: 171 RKLAKELAGEHITVNAIAPGRFPSKMTAFL 200

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 32/210 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQ-IVL 111
           ++GKV I+TG N+G+G   A  LAK  A +++            ++ ++ ++  G+ +  
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-----TNWDETRRLIEKEGRKVTF 67

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLT--TKEGYEVHFGINHV 168
           ++++L   +S +   K  ++++ KI +L+NNAG    I+   L     E +     IN  
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGT---IRRAPLLEYKDEDWNAVMDINLN 124

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL----M 224
             + L+            V   +  +G+    N+     F Q G   PAY  SK     +
Sbjct: 125 SVYHLSQA----------VAKVMAKQGSGKIINIASMLSF-QGGKFVPAYTASKHGVAGL 173

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
              F  EL    A   + V+ + PG+  T 
Sbjct: 174 TKAFANEL----AAYNIQVNAIAPGYIKTA 199

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 15/105 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           M+ KV ++TGA+SGIG  TA+ LA    TV    R +       +K++     G   L  
Sbjct: 1   MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV-------DKMEDLASLGVHPL-S 52

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-------VPIKE 151
           L++    SIK     ++ +  +I VL+NNAG         VPI E
Sbjct: 53  LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDE 97

Length = 273

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 36/211 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  ++TG + G+G + A+ L +  A VVL  R     +EA   L+    D   + + 
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDA--LWIA 67

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHF 171
            ++A    I+  A+  ++++  + +L+NNAG +   P ++     E ++    +N  G F
Sbjct: 68  ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPV--EAWDKVMNLNVRGLF 125

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNP-------AYCNS 221
           LL+    + + K      S++ RG    I+  ++ G  G       NP       AY  S
Sbjct: 126 LLS----QAVAKR-----SMIPRGYGRIINVASVAGLGG-------NPPEVMDTIAYNTS 169

Query: 222 K--LMNYYFGAELYLKYADKGVDVSVVCPGW 250
           K  ++N  F   L  ++   G+ V+ + PG+
Sbjct: 170 KGAVIN--FTRALAAEWGPHGIRVNAIAPGF 198

Length = 259

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 18/141 (12%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GK  ++TGA  GIG  T K LAK  A VV    ++ R Q  L+ L +E     I  + ++
Sbjct: 7   GKRALVTGAGKGIGRATVKALAKAGARVV----AVSRTQADLDSLVRE--CPGIEPVCVD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+ +D+ +    +V      + +L+NNA V++  P  E   TKE ++  F +N      +
Sbjct: 61  LSDWDATEEALGSV----GPVDLLVNNAAVAILQPFLE--VTKEAFDRSFDVNVRAVIHV 114

Query: 174 TNL----LIERIQKVVIVGSS 190
           + +    +I R     IV  S
Sbjct: 115 SQIVARGMIARGVPGSIVNVS 135

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 51/219 (23%), Positives = 74/219 (33%), Gaps = 42/219 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           ++ K  ++TGAN GIG    + L    A  V    R       +   L  +  D  +V +
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRD----PGSAAHLVAKYGDK-VVPL 55

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP---IKEKLTTKEGYEVHFGINHVG 169
            L++   +SIK  A     Q   + V+INNAGV  P   ++E     E  +    +N  G
Sbjct: 56  RLDVTDPESIKAAA----AQAKDVDVVINNAGVLKPATLLEEGAL--EALKQEMDVNVFG 109

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQ-------KGHSN-PAYCNS 221
              L       ++                    NG    V        K       Y  S
Sbjct: 110 LLRLAQAFAPVLKA-------------------NGGGAIVNLNSVASLKNFPAMGTYSAS 150

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
           K   Y     L  + A +G  V  V PG   T +   A 
Sbjct: 151 KSAAYSLTQGLRAELAAQGTLVLSVHPGPIDTRMAAGAG 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              KV ++TGA+SGIG  TA++LA+    V    R             +      + L+E
Sbjct: 2   SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSR----------NPARAAPIPGVELLE 51

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
           L++    S++     V+ +  +I VL+NNAGV +
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGL 85

Length = 270

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
            GKV +ITGA SG G   A+  A L   +VL        Q+AL++   E++    +++ +
Sbjct: 5   AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ----QDALDRAVAELRAQGAEVLGV 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             +++    ++  A   ++++  +H+L NNAGV
Sbjct: 61  RTDVSDAAQVEALADAALERFGAVHLLFNNAGV 93

Length = 287

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 4e-11
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 23/195 (11%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           ++ GA+SGIG  TA ELA     V LG R + + +E ++K++ +   G+ V   L++   
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDP 71

Query: 120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE----VHF-GINHVGHFLLT 174
           DS+K+F     +   +I VL++ AG +   K    + E +E    +H  G N +   +L 
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
            ++  R   ++ VGS +  R               Q+ H   AY  +K         L +
Sbjct: 132 GMIERRRGDLIFVGSDVALR---------------QRPHMG-AYGAAKAGLEAMVTNLQM 175

Query: 235 KYADKGVDVSVVCPG 249
           +    GV  S+V PG
Sbjct: 176 ELEGTGVRASIVHPG 190

Length = 274

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 62.1 bits (151), Expect = 5e-11
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 20/201 (9%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALE-KLKKEVQDGQIVLMELN 115
           K+ ++TGA  GIG   A+EL      V+    S      A +   +    + Q+ L EL+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFS--GNDCAKDWFEEYGFTEDQVRLKELD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           +   +        + ++   + +L+NNAG++     K  + + +      N    F +T 
Sbjct: 61  VTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQ 120

Query: 176 LLIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
            L            ++ ++G    I+  ++NG KG          Y  +K     F   L
Sbjct: 121 PLFA----------AMCEQGYGRIINISSVNGLKGQF----GQTNYSAAKAGMIGFTKAL 166

Query: 233 YLKYADKGVDVSVVCPGWCYT 253
             + A  G+ V+ + PG+  T
Sbjct: 167 ASEGARYGITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 62.5 bits (152), Expect = 5e-11
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 26/139 (18%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           K +E KV +ITGA++GIG  +A  LA+  A V+    +     EA+ +   +++   G+ 
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-----EAVSETVDKIKSNGGKA 56

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH------- 162
               ++++    +K+FA  + +Q+ ++ VL NNAGV               +H       
Sbjct: 57  KAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVD---------NAAGRIHEYPVDVF 107

Query: 163 ---FGINHVGHFLLTNLLI 178
                ++  G FL+T +L+
Sbjct: 108 DKIMAVDMRGTFLMTKMLL 126

Length = 272

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 61.0 bits (148), Expect = 9e-11
 Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 24/218 (11%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMELN 115
           V I+TG  +GIG   A  LAK  A+VV+   + ++ + A E +   +Q   GQ + +E N
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVI---ADLKSEGA-EAVAAAIQQAGGQAIGLECN 56

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLLT 174
           + S   ++   K  + Q+  I +L+NNAG   P    +  T+E +E  F +N    F L+
Sbjct: 57  VTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 175 NLLIERIQKV---VIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            L    +QK     I+  S M     +                  AY +SK    +    
Sbjct: 117 QLCAPHMQKAGGGAILNISSMSSENKNVRIA--------------AYGSSKAAVNHMTRN 162

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
           L      KG+ V+ V PG   T+          ++ M+
Sbjct: 163 LAFDLGPKGIRVNAVAPGAVKTDALASVLTPEIERAML 200

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 6/90 (6%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLME 113
            KV IITG +SG+G   AK  A+  A VV+  R+    +E LE+ K E++   GQ++ ++
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT----KEKLEEAKLEIEQFPGQVLTVQ 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNA 143
           +++ + + ++   + + +++ +I  LINNA
Sbjct: 57  MDVRNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 24/94 (25%), Positives = 46/94 (48%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV ++TGA  GIG   A+  A+  A V L        + A   + ++V   +++ + 
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
            ++    S+        + +  + VL+NNAG++V
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV 98

Length = 260

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVL 111
           + GKV IITGA+SGIG   AK  A+  A VV+G     R Q  L++L  E+  + G+ V 
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGA----RRQAELDQLVAEIRAEGGEAVA 59

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +  ++      K      ++++  + +  NNAG 
Sbjct: 60  LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGT 93

Length = 254

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 18/205 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           + GKV I+TG   GIG      LA+  A VV+   S    +EA E L  E+      +  
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYA 60

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           ++ +++  +      +  +  + K+ +L+NNAG++     K   +E +E    +N    F
Sbjct: 61  VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF 120

Query: 172 LLTNLLIERIQKVVIVGSSLMDRG-TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
             T+ ++  I +         + G  I   ++ G+ G    G     Y  +K     F  
Sbjct: 121 NTTSAVLPYITEA--------EEGRIISISSIIGQAG----GFGQTNYSAAKAGMLGFTK 168

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A   V V+ +CPG+  T +
Sbjct: 169 SLALELAKTNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 29/218 (13%)

Query: 48  SPFYKP---MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV 104
              YK    ++GK  +ITG +SGIG   A   A+  A V +        ++  E+ KK +
Sbjct: 15  EKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLP--EEEDDAEETKKLI 72

Query: 105 -QDG-QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYE 160
            ++G + +L+  +L      ++  K V+K++ K+ +L+NNA    P +  E +TT E  E
Sbjct: 73  EEEGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITT-EQLE 131

Query: 161 VHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA--- 217
             F  N    F LT   +  ++K    GSS+     I+  ++   KG       +P    
Sbjct: 132 KTFRTNIFSMFYLTKAALPHLKK----GSSI-----INTTSVTAYKG-------SPHLLD 175

Query: 218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           Y  +K     F   L L+ A+KG+ V+ V PG  +T L
Sbjct: 176 YAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 11/117 (9%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GK  ++TGA+SGIG   A  LA+  A VV    +  R   AL++L  E     + L   +
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVV----AAARNAAALDRLAGETGCEPLRLDVGD 64

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            A+  +        +        L+N AG++        T EG++    +N  G  L
Sbjct: 65  DAAIRAA-------LAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Length = 245

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 47/222 (21%), Positives = 82/222 (36%), Gaps = 28/222 (12%)

Query: 58  VCIITGANSGIGYETAKELAK--LKATVVLGCR--SMIRGQEALEKLKKEVQ--DGQIVL 111
           V I+TGA+ GIG   A ELA       +               +    +        I  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVG 169
           +  + A  D            + ++  L+NNAG++V  +  L   T++ ++    IN  G
Sbjct: 63  LSDHEALLDQAWE-------DFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRG 115

Query: 170 HFLLT----NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            F LT      ++E+  +          R  I   ++N       +G     YC SK   
Sbjct: 116 PFFLTQAVARRMVEQPDR-----FDGPHRSIIFVTSINAYLVSPNRGE----YCISKAGL 166

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV 267
                 L  + AD+G+ V  + PG  +T++      K+ + +
Sbjct: 167 SMATRLLAYRLADEGIAVHEIRPGLIHTDMTAPVKEKYDELI 208

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 39/208 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL-ME 113
           EGKV I+TGA+SGIG   A+  A   A VV+  R+    +EA E++  E+  G   + + 
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN----EEAAERVAAEILAGGRAIAVA 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGH 170
            +++    ++      ++++  + +L+NNAG +    P+ +    +  ++  F +N    
Sbjct: 60  ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLD--VDEAEFDRIFAVNVKSP 117

Query: 171 FLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--- 222
           +L T   +  ++      +V V S+           L    G          Y  SK   
Sbjct: 118 YLWTQAAVPAMRGEGGGAIVNVAST---------AGLRPRPGLG-------WYNASKGAV 161

Query: 223 -LMNYYFGAELYLKYADKGVDVSVVCPG 249
             +     AEL        + V+ V P 
Sbjct: 162 ITLTKALAAEL----GPDKIRVNAVAPV 185

Length = 251

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 40/216 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ KV I+TG  SGIG   +  LA+  A  V+  RS     E  E+L+      + V ++
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAEFVQVD 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
           L        ++  +  + ++ +I  L+NNAGV   V ++     +E +      N + ++
Sbjct: 64  LTDD--AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLE---AGREAFVASLERNLIHYY 118

Query: 172 LLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           ++ +  +  ++     +V + S     G              Q G S   Y  +K     
Sbjct: 119 VMAHYCLPHLKASRGAIVNISSKTALTG--------------QGGTS--GYAAAK----- 157

Query: 228 FGAELYL------KYADKGVDVSVVCPGWCYTNLFR 257
            GA+L L        A  GV V+ V P    T L+ 
Sbjct: 158 -GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE 192

Length = 258

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 35/220 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TGA SGIG   A+      A VV+      R + A  ++           + 
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAI-----AVS 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
           L++   DSI       ++++  I +L NNA +    PI +   +++ Y+  F +N  G F
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILD--ISRDSYDRLFAVNVKGLF 116

Query: 172 LLT----NLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--L 223
            L       ++E+ +  K++ + S    RG          +  V        YC +K  +
Sbjct: 117 FLMQAVARHMVEQGRGGKIINMASQAGRRG----------EALVS------HYCATKAAV 160

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
           ++Y   A L L     G++V+ + PG   T ++   D  F
Sbjct: 161 ISYTQSAALAL--IRHGINVNAIAPGVVDTPMWDQVDALF 198

Length = 257

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 276 VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDV 335
           +V V S     G I+FD+LN EK +    ++  AYC SKL N  F  EL  +    GV V
Sbjct: 132 IVNVSSLAHKAGKINFDDLNSEKSY----NTGFAYCQSKLANVLFTRELARRLQGTGVTV 187

Query: 336 CVVCPGWCYTNLFRHADI-KFYQKVMIFPIAMMYMRSANQ 374
             + PG   T L RH  I   +   ++ P+   ++++  +
Sbjct: 188 NALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPRE 227

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 16/137 (11%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +G V ++TG  SG+G  T + L    A VV+    +       E + K   + + V   +
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVI----LDLPNSPGETVAKLGDNCRFV--PV 54

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH--------FGIN 166
           ++ S   +K        ++ ++ +++N AG++  +  K   K+G + H          +N
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGIA--VAAKTYNKKGQQPHSLELFQRVINVN 112

Query: 167 HVGHFLLTNLLIERIQK 183
            +G F +  L    + K
Sbjct: 113 LIGTFNVIRLAAGAMGK 129

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 11/142 (7%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-QIVLMELNL 116
           V I+TGA+ GIG   A+EL K  +  V+   +  R +E L++LK+E++ G ++  ++ +L
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLA--RSEEPLQELKEELRPGLRVTTVKADL 58

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYEVHFGINHVGHFLLT 174
           +    ++   + + K   +  +LINNAG   P+   E +   E  + +F +N      LT
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDE-LQKYFDLNLTSPVCLT 117

Query: 175 NLLI-----ERIQKVVIVGSSL 191
           + L+       ++K V+  SS 
Sbjct: 118 STLLRAFKKRGLKKTVVNVSSG 139

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 33/211 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVL 111
            + +V ++TGA SGIG   A+ L K     V  C    RG+E L    KE+++   +   
Sbjct: 1   QDSEVALVTGATSGIGLAIARRLGKEGLR-VFVCA---RGEEGLATTVKELREAGVEADG 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNA-----GVSVPIKEKLTTKEGYEVHFGIN 166
              ++ S   I+      + +Y  I VL+NNA     G +  + ++L      +V   + 
Sbjct: 57  RTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELW----LDV---VE 109

Query: 167 HVGHFLLTNLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSK 222
                  TNL  + R+ K V+    +++RGT   I+  +  G++G V   H+ P Y  SK
Sbjct: 110 -------TNLTGVFRVTKEVLKAGGMLERGTGRIINIASTGGKQGVV---HAAP-YSASK 158

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
                F   L L+ A  G+ V+ VCPG+  T
Sbjct: 159 HGVVGFTKALGLELARTGITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE-ALEKLKKEVQD------ 106
           + GKV  +TGA+ GIG   A  LAK  ATVV+  ++   G   + + L   +++      
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 107 ---GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
              GQ + + +++   D ++   +  + Q+ ++ +L+NNAG 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGA 102

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 51/218 (23%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVL- 111
           ++GKV +++G   G+G   A   A+  A VVL  R+     E L+++  E+ D G+  L 
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART----AERLDEVAAEIDDLGRRALA 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTT------KEGYEVHFGI 165
           +  ++   D   N     ++++ ++  L+NNA   VP  + L        +   E+    
Sbjct: 59  VPTDITDEDQCANLVALALERFGRVDALVNNA-FRVPSMKPLADADFAHWRAVIEL---- 113

Query: 166 NHVGHFLLTNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AY 218
           N +G   LT      L E    +V++ S ++                    HS P   AY
Sbjct: 114 NVLGTLRLTQAFTPALAESGGSIVMINSMVLR-------------------HSQPKYGAY 154

Query: 219 CNSK----LMNYYFGAELYLKYADKGVDVSVVCPGWCY 252
             +K      +     EL      +G+ V+ V PG+ +
Sbjct: 155 KMAKGALLAASQSLATEL----GPQGIRVNSVAPGYIW 188

Length = 258

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 57/232 (24%), Positives = 83/232 (35%), Gaps = 63/232 (27%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
            + GKV ++TGA  GIG E A+ L    A + L    +   +  L  L  E+     VL 
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLAL----VDLEEAELAALAAELGGDDRVLT 61

Query: 113 EL----NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP--------------IKEKLT 154
            +    +LA+  +    A+  ++++  I V++ NAG++                I   L 
Sbjct: 62  VVADVTDLAAMQAA---AEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLL 118

Query: 155 TKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGS------SLMDRGTIDFDNLNGEKGF 208
                    G+ H     L   LIER   V+ V S      +                  
Sbjct: 119 ---------GVFHTVRATLPA-LIERRGYVLQVSSLAAFAAAPG--MA------------ 154

Query: 209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
                   AYC SK     F   L L+ A  GV V      W  T+L R AD
Sbjct: 155 --------AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDAD 198

Length = 296

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 24/218 (11%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE--VQDGQIVLME 113
           GKV I+TG + GIG   A+ LA+  A V +   S  R +E  E+L K+  V+       +
Sbjct: 8   GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAY---K 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT-TKEGYEVHFGINHVGHFL 172
            +++S +S++   K + K + KI +LI NAG++V  K  L  T E +     +N  G F 
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH-KPALDYTYEQWNKVIDVNLNGVFN 123

Query: 173 LTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
                  +  ++ +  +I+ +S+   GTI           V +     AY  SK    + 
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASM--SGTI-----------VNRPQPQAAYNASKAAVIHL 170

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK 266
              L +++A   + V+ + PG+  T+L    D +  +K
Sbjct: 171 AKSLAVEWAKYFIRVNSISPGYIDTDLTDFVDKELRKK 208

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 9/123 (7%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATV-VLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
            V ++TG   GIG   A+ LA     + +          E L   ++E++    +++   
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAIND----RPDDEELAATQQELRALGVEVIFFP 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVGHF 171
            ++A   + +         + +I  L+NNAGV V ++  L   T E ++    IN  G F
Sbjct: 59  ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF 118

Query: 172 LLT 174
            LT
Sbjct: 119 FLT 121

Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.9 bits (145), Expect = 9e-10
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 27/203 (13%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
            +V  ITG   GIG   A   A     +++    + R  E  +KL  E    + + ++ +
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLI----IDRDAEGAKKL-AEALGDEHLSVQAD 323

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLLT 174
           +    ++++    +  ++ ++ VL+NNAG++   K  L  + E +   + +N  G F   
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACA 383

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK----LMNYYFGA 230
                 + +    G  +++ G+I             +     AYC SK    +++     
Sbjct: 384 RAAARLMSQ----GGVIVNLGSI-----ASLLALPPRN----AYCASKAAVTMLSRSLAC 430

Query: 231 ELYLKYADKGVDVSVVCPGWCYT 253
           E     A  G+ V+ V PG+  T
Sbjct: 431 EW----APAGIRVNTVAPGYIET 449

Length = 520

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLM 112
           +GKV +ITG    +G   AKELA+  A V +    + R QE  E +  E+    G+ + +
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAI----LDRNQEKAEAVVAEIKAAGGEALAV 64

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           + ++   +S++   + +++ +    +LIN AG + P   K TT    E H  I     F 
Sbjct: 65  KADVLDKESLEQARQQILEDFGPCDILINGAGGNHP---KATTDN--EFHELIEPTKTFF 119

Query: 173 LTNLLIERIQKVV 185
             +L  E  + V 
Sbjct: 120 --DLDEEGFEFVF 130

Length = 278

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 24/211 (11%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV ++TG  +GIG  TA   A+  A VV+  R    G+E +  L +E   G+ + +  
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVA-LIREA-GGEALFVAC 63

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV---PIKEKLTTKEGYEVHFGINHVGHF 171
           ++     +K   +  +  Y ++    NNAG+ +    + E   ++  ++   G+N  G +
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEG--SEAEFDAIMGVNVKGVW 121

Query: 172 LLTNLLIERIQKV---VIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           L     I  +       IV ++          ++ G     +       Y  SK      
Sbjct: 122 LCMKYQIPLMLAQGGGAIVNTA----------SVAGLGAAPKM----SIYAASKHAVIGL 167

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                ++YA KG+ V+ VCP    T++FR A
Sbjct: 168 TKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA 198

Length = 253

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 50/257 (19%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
             EGKV ++TGA  GIG   A+ LA   A V+L  RS +   E L ++          + 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAG--DAAHVH 57

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             +L ++   +   +  ++++ ++ VLINN G ++  K      E YE       +   L
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAK----PYEHYEEEQIEAEIRRSL 113

Query: 173 LTNL---------LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
              L         ++ER Q V++  SS+  RG                 +  P Y  +K 
Sbjct: 114 FPTLWCCRAVLPHMLERQQGVIVNVSSIATRG----------------IYRIP-YSAAKG 156

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR---------HADIKFYQKVMIFPIAM 274
                 A L  ++A  G+ V+ V PG       +           +  +YQ+++      
Sbjct: 157 GVNALTASLAFEHARDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVD----- 211

Query: 275 MVVIVGSSLMDR-GTID 290
               + SSLM R GTID
Sbjct: 212 --QTLDSSLMGRYGTID 226

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV IITG  SGIG  TA+  AK  A VV+       GQ     +  E+ D  I  + 
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQ----AVAAELGDPDISFVH 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVG 169
            ++     ++      + ++ ++ ++ NNAGV       I E  T+ E +E    +N  G
Sbjct: 58  CDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILE--TSLEEFERVLDVNVYG 115

Query: 170 HFLLT 174
            FL T
Sbjct: 116 AFLGT 120

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
            KV I+TG + GIG    +   +  A VV   R    GQ ALE        G    +  +
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQ-ALESELNRAGPGSCKFVPCD 67

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEGYEVHFGINHVGHFLLT 174
           +   + IK      ++++ +I  L+NNAG   P +    T+ + +     +N + +FL +
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 175 NLLIERIQKV---VIVGSSLM 192
              +  ++K    +I  SSL+
Sbjct: 128 KYALPHLRKSQGNIINLSSLV 148

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 34/201 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ME    +ITGA+ GIG   A+ELA    T++LG R      E L++L  E+  G      
Sbjct: 1   MERPTALITGASRGIGAAIARELAP-THTLLLGGRP----AERLDELAAEL-PGATPF-P 53

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           ++L   ++I       ++Q  ++ VL++NAGV+   P+ E  +T + +     +N V   
Sbjct: 54  VDLTDPEAI----AAAVEQLGRLDVLVHNAGVADLGPVAE--STVDEWRATLEVNVVAPA 107

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AYCNSKLMNYYF 228
            LT LL+  ++            G + F  +N   G      +NP   +Y  SK      
Sbjct: 108 ELTRLLLPALRAA---------HGHVVF--INSGAGL----RANPGWGSYAASKFALRAL 152

Query: 229 GAELYLKYADKGVDVSVVCPG 249
              L  +     V V+ V PG
Sbjct: 153 ADALREEEPGN-VRVTSVHPG 172

Length = 227

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 5/142 (3%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G+  +ITGA+ GIG   A+E   L A V++  R      +A ++L +E  + ++  + 
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +++  +  +     V   +  +H+L+NNAG ++       T++ +   F  N    F L
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126

Query: 174 TNLLIERIQ-----KVVIVGSS 190
           +      ++      +V +GS 
Sbjct: 127 SRYAHPLLKQHASSAIVNIGSV 148

Length = 257

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 71/236 (30%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME- 113
           K C +TGA SGIG  TA  LA   A + L  R      + L +   + +   G +     
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRD----ADGLAQTVADARALGGTVPEHRA 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+++ +D++  FA ++   +  + V++N AG+S                +G        +
Sbjct: 57  LDISDYDAVAAFAADIHAAHGSMDVVMNIAGISA---------------WGT-------V 94

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-------QKGH----SNPA----- 217
             L  E+ +++V V  +LM  G I     +  + FV       + GH    S+ A     
Sbjct: 95  DRLTHEQWRRMVDV--NLM--GPI-----HVIETFVPPMVAAGRGGHLVNVSSAAGLVAL 145

Query: 218 -----YCNSKLMNYYFG----AELYLKY--ADKGVDVSVVCPGWCYTNLFRHADIK 262
                Y  SK     FG    +E+ L++  A  G+ VSVV PG   T L    +I 
Sbjct: 146 PWHAAYSASK-----FGLRGLSEV-LRFDLARHGIGVSVVVPGAVKTPLVNTVEIA 195

Length = 272

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 20/128 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK+ I+TG +SGIG    KEL    A VV             +    + Q      + 
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVN-----------ADIHGGDGQHENYQFVP 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP--IKEKLTTKEGYEV-------HFG 164
            +++S + + +    +++++ +I  L+NNAG+++P  + ++      YE+        F 
Sbjct: 56  TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFN 115

Query: 165 INHVGHFL 172
           IN  G FL
Sbjct: 116 INQKGVFL 123

Length = 266

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 276 VVIVGSSLMDRGTIDFDNL--NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGV 333
           +V V S     G IDF++L     K +        AY  SKL N  F  EL  +    GV
Sbjct: 132 IVNVSSIAHRAGPIDFNDLDLENNKEY----SPYKAYGQSKLANILFTRELARRLEGTGV 187

Query: 334 DVCVVCPGWCYTNLFRHADIKF 355
            V  + PG   T L R     F
Sbjct: 188 TVNALHPGVVRTELLRRNGSFF 209

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 26/198 (13%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  ++TGA  GIG   A+        V+     +     AL      + D + V +  +L
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLA----LDIDAAALAAFADALGDARFVPVACDL 58

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL---- 172
               S+     N   +   + VL+ NAG +       TT   +     +N    +L    
Sbjct: 59  TDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEA 118

Query: 173 -LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            L  +L      VV +GS            +NG       GH  PAY  +K    ++   
Sbjct: 119 VLEGMLKRSRGAVVNIGS------------VNGMAAL---GH--PAYSAAKAGLIHYTKL 161

Query: 232 LYLKYADKGVDVSVVCPG 249
           L ++Y   G+  + V PG
Sbjct: 162 LAVEYGRFGIRANAVAPG 179

Length = 257

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 50/212 (23%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           K  +ITG +SG G   AK+L  L  TV+ GC +   G  A ++L++   D ++  ++L++
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKN-GPGA-KELRRVCSD-RLRTLQLDV 57

Query: 117 ASFDSIKNFAKNVMKQYPKIHV-------LINNAGVSVPIK-EKLTTKEGY----EVH-F 163
              + IK  A+ V     K HV       L+NNAG+      E+L   + Y    EV+ F
Sbjct: 58  TKPEQIKRAAQWV-----KEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLF 112

Query: 164 GINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           G   V    L   L+ R + +VV V S              G   F   G    AYC SK
Sbjct: 113 GTVEVTKAFLP--LLRRAKGRVVNVSSMG------------GRVPFPAGG----AYCASK 154

Query: 223 LMNYYFGAELY---LKYADK--GVDVSVVCPG 249
                   E +   L+   +  GV VS++ PG
Sbjct: 155 -----AAVEAFSDSLRRELQPWGVKVSIIEPG 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 31/203 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV I+TGA SG G   A+  A+  A VV+   +        E++  ++ +  I + +
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAADIGEAAIAI-Q 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGH 170
            ++     ++   +  + ++ ++ +L+NNAG++    P+ E    +E ++  F +N    
Sbjct: 58  ADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLE--VDEEEFDRVFAVNVKSI 115

Query: 171 FLLTNLLI---ERIQKVVI--VGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
           +L    L+   E     VI  + S+   R        N  KG+V       A   +K M 
Sbjct: 116 YLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWV-----VTA---TKAMA 167

Query: 226 YYFGAELYLKYADKGVDVSVVCP 248
                   ++ A + + V+ +CP
Sbjct: 168 --------VELAPRNIRVNCLCP 182

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
            P+ G V +ITGA+SGIG  TA+  A+  A +VL      R +EAL+ + +E +    ++
Sbjct: 3   GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAA----RDEEALQAVAEECRALGAEV 58

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +++  ++   D +K  A        +I V +NN GV
Sbjct: 59  LVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 6e-09
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+V +ITG  SGIG  TA+ LA   ATVV+G      G+ A +++      G  V   
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----GGLFV--P 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP 148
            ++   D++        + Y  + +  NNAG+S P
Sbjct: 58  TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPP 92

Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 55.4 bits (134), Expect = 7e-09
 Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 29/204 (14%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLA 117
           +ITGA+SGIG   A+E AK    V L  R      + L++LK E+   +  + +  L++ 
Sbjct: 2   LITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDVT 57

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVGHFLLTNL 176
             +  +     +  +   + ++I NAGV        L+ K   E     N +G   +   
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILEA 116

Query: 177 LIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            + + +      +V++ S            +   +G         AY  SK         
Sbjct: 117 ALPQFRAKGRGHLVLISS------------VAALRGLPGA----AAYSASKAALSSLAES 160

Query: 232 LYLKYADKGVDVSVVCPGWCYTNL 255
           L      +G+ V+V+ PG+  T L
Sbjct: 161 LRYDVKKRGIRVTVINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 7e-09
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 7/132 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GK  IITGA +GIG E A   A   A+VV+   S I   +A   +  E+Q   GQ   
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVV---SDIN-ADAANHVVDEIQQLGGQAFA 64

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
              ++ S   +   A   + +  K+ +L+NNAG   P K        +   + +N    F
Sbjct: 65  CRCDITSEQELSALADFALSKLGKVDILVNNAGGGGP-KPFDMPMADFRRAYELNVFSFF 123

Query: 172 LLTNLLIERIQK 183
            L+ L+   ++K
Sbjct: 124 HLSQLVAPEMEK 135

Length = 255

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 20/143 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             GK   +TGA  GIGY  A    +  A V+             ++     +D       
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVI-----------GFDQAFLTQEDYPFATFV 54

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
           L+++   ++    + ++ +   + VL+N AG+           + E ++  F +N  G F
Sbjct: 55  LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDS--LSDEDWQQTFAVNAGGAF 112

Query: 172 LLTNLLIERIQK-----VVIVGS 189
            L   ++ + ++     +V VGS
Sbjct: 113 NLFRAVMPQFRRQRSGAIVTVGS 135

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 38/213 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVV-LGCRSMIRGQEALEKLKKEVQDGQIVL- 111
           +EGKV ++TGAN+G+G   A  LA+  A +V  G       Q+ +E L      G+  L 
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL------GRRFLS 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK----EKLTTKEGYEVHFGINH 167
           +  +L+  ++IK    + ++++  I +L+NNAG+   I+    E+ + K+  +V   +N 
Sbjct: 57  LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGI---IRRADAEEFSEKDWDDV-MNVNL 112

Query: 168 VGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
              F LT    +         K++ + S L  +G I                  P+Y  S
Sbjct: 113 KSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV----------------PSYTAS 156

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
           K         L  ++A KG++V+ + PG+  TN
Sbjct: 157 KHAVAGLTKLLANEWAAKGINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 276 VVIVGSSLMDR--GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGV 333
           VV V SS   R    I FD+L  E+ + +      AY  SKL N  F  EL  + A  G 
Sbjct: 147 VVTV-SSGGHRIRAAIHFDDLQWERRYNRVA----AYGQSKLANLLFTYELQRRLAAAGA 201

Query: 334 DVCVVC--PGWCYTNLFRHA 351
               V   PG   T L R+ 
Sbjct: 202 TTIAVAAHPGVSNTELARNL 221

Length = 306

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           ++GK  +ITGA  GIG   A  LAK    V L  R+    +E L+ + +EV+    ++V+
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLART----EENLKAVAEEVEAYGVKVVI 60

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
              +++ ++ +    + +  +   I +LINNAG+S
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS 95

Length = 239

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 25/92 (27%), Positives = 49/92 (53%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
            +EG+V ++TG +SGIG  T + L +  A+V +  R   R   A  +L+++    +++  
Sbjct: 5   QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAA 64

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
             ++     +  FA  V  ++  + +L+NNAG
Sbjct: 65  RCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 54.2 bits (130), Expect = 2e-08
 Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 27/216 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  +ITG+  GIG   A+   +  A V +   ++   +    ++           + 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAA-----CAIS 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
           L++    SI      ++ ++  I +L+NNA +    PI +   T+E Y+  F IN  G  
Sbjct: 56  LDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVD--ITRESYDRLFAINVSGTL 113

Query: 172 LLTNLLIERIQKVVIVGSSLMDRG--TIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYY 227
                +++ + + +I       RG   I+  +  G +G    G     YC +K  +++  
Sbjct: 114 ----FMMQAVARAMIAQG----RGGKIINMASQAGRRGEALVGV----YCATKAAVISLT 161

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
             A L L     G++V+ + PG      +   D KF
Sbjct: 162 QSAGLNL--IRHGINVNAIAPGVVDGEHWDGVDAKF 195

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 52  KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVL-----GCRSMIRGQEALEK--LKK 102
            P+  K+ ++TGA+  +GIG    + LA     +         ++M  G    E   LK+
Sbjct: 1   LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKE 60

Query: 103 EVQDGQIVL--MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE 160
           E++   +    ME++L+   +       V ++     +LINNA  S   + +  T E  +
Sbjct: 61  EIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLD 120

Query: 161 VHFGINHVGHFLLTNLLIER 180
            H+ +N     LL++   ++
Sbjct: 121 KHYAVNVRATMLLSSAFAKQ 140

Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 25/92 (27%), Positives = 48/92 (52%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
            + KV +ITG  SG+G  TA  LAK  A + L   +    + A   L +   D +++L++
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            +++    ++ +    ++Q+ +I    NNAG+
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGI 92

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 33/200 (16%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-QIVLMELNLAS 118
           ++TGA  GIGY  A+ LA+  A V          ++ LE +    + G      +L++A 
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVA-AVD--RNFEQLLELVADLRRYGYPFATYKLDVAD 58

Query: 119 FDSIKNFAKNVMKQYPKIHVLINNAGV-SV-PIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
             ++    + + ++Y  I VL+N AG+  +  I     + E ++  F +N  G F ++  
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDS--LSDEDWQATFAVNTFGVFNVSQA 116

Query: 177 LIERIQK-----VVIVGS--SLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           +  R+++     +V VGS  + + R                      AY  SK       
Sbjct: 117 VSPRMKRRRSGAIVTVGSNAANVPR------------------MGMAAYAASKAALTMLT 158

Query: 230 AELYLKYADKGVDVSVVCPG 249
             L L+ A  G+  +VV PG
Sbjct: 159 KCLGLELAPYGIRCNVVSPG 178

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 18/209 (8%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-QIVLMELN 115
           KV ++TG   GIG   A+ LAK    V +   + +  + A E  K+  Q G + V  +L+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAV---ADLNEETAKETAKEINQAGGKAVAYKLD 57

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           ++  D + +      +++    V++NNAGV    PI E   T+E  +  + +N  G    
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILE--ITEEELKKVYNVNVKGVLFG 115

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
                 + +K    G        I+  ++ G +G         AY ++K           
Sbjct: 116 IQAAARQFKKQGHGGK------IINAASIAGHEGNPILS----AYSSTKFAVRGLTQTAA 165

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADIK 262
            + A KG+ V+  CPG   T ++   D +
Sbjct: 166 QELAPKGITVNAYCPGIVKTPMWEEIDEE 194

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 53.8 bits (129), Expect = 3e-08
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 38/208 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLM 112
           + G+  ++TGA+ GIG E A+ L    A V L G R      E LE L  E+ + ++ + 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV-----EKLEALAAELGE-RVKIF 57

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFG-------- 164
             NL+  D +K   +        + +L+NNAG+         TK+G  V           
Sbjct: 58  PANLSDRDEVKALGQKAEADLEGVDILVNNAGI---------TKDGLFVRMSDEDWDSVL 108

Query: 165 -INHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSK 222
            +N    F LT  L             +M R      N+    G     G +N  YC SK
Sbjct: 109 EVNLTATFRLTRELTH----------PMMRRRYGRIINITSVVGVTGNPGQAN--YCASK 156

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGW 250
                F   L  + A + V V+ V PG+
Sbjct: 157 AGMIGFSKSLAQEIATRNVTVNCVAPGF 184

Length = 245

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 53.5 bits (128), Expect = 3e-08
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 28/214 (13%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQI 109
           K ++GKV ++TGA+ GIG   A  LA   A V +      R ++A ++  +E++   G+ 
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAI---HYGRNKQAADETIREIESNGGKA 58

Query: 110 VLMELNLASFDSIKNFAKNVMKQY------PKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
            L+E +L S D +K   + +  +        +I +L+NNAG+      + TT+E ++   
Sbjct: 59  FLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIM 118

Query: 164 GINHVGHFLLTN--LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
            +N    F L    L + R +  VI  SS   R         G  G +  G S  A    
Sbjct: 119 AVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR--------LGFTGSIAYGLSKGALNTM 170

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            L        L     ++G+ V+ + PG+  T++
Sbjct: 171 TL-------PLAKHLGERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVLMELNLAS 118
           ++T ++ GIG+  A+EL K  A VV+  R+    +E LEK  KE+++ G++  ++ +L+ 
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRN----EENLEKALKELKEYGEVYAVKADLSD 59

Query: 119 FDSIKNFAKNVMKQYPKIHVLINNAG 144
            D +KN  K   +    I  L+ NAG
Sbjct: 60  KDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 31/217 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++ K  I+TG   GIG  T +  A+  A V +        +EA EK+  +++   G    
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAV----FDLNREAAEKVAADIRAKGGNAQA 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGIN---- 166
              ++   DS+        +    + VL+NNAG          T+   +E    IN    
Sbjct: 57  FACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGA 115

Query: 167 -HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            H+ H +L  ++     ++V + S     G+      +GE  +        A C   L+ 
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAARVGS------SGEAVY--------AACKGGLVA 161

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
             F   +  ++A  G+ V+VVCPG   T L    DI 
Sbjct: 162 --FSKTMAREHARHGITVNVVCPGPTDTALL--DDIC 194

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 20/149 (13%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQD------GQ 108
           G+V ++TGA  G+G   A   A+  A VV+       +G         +V D      G+
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK 64

Query: 109 IVLMELNLASFDSIKNFAK---NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
            V      A++DS+++  K     +  + ++ +L+NNAG+         ++E +++   +
Sbjct: 65  AV------ANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRV 118

Query: 166 NHVGHFLLTNLLIERIQK----VVIVGSS 190
           +  G F +T      ++K     +I  SS
Sbjct: 119 HLKGSFKVTRAAWPYMRKQKFGRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.9 bits (127), Expect = 6e-08
 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
            +GKV +ITG   GIG   A+   +  A V +   S        E   KE+++  +  ++
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA-------ENEAKELREKGVFTIK 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVG 169
            ++ + D +K   + V K++ ++ VL+NNAG+   +  +   +E Y     IN  G
Sbjct: 58  CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNG 113

Length = 255

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 52.6 bits (126), Expect = 7e-08
 Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 20/206 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  ++TGA SGIG E A ELA+  A V +   +        +++ K    G+ + + 
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK--AGGKAIGVA 62

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +++ + D++      V +++  + +L++NAG+ +  PI+        ++    I+  G F
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFAD--WKKMQAIHVDGAF 120

Query: 172 LLTNLLIERIQKVVIVGSSLMDRG--TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           L T   ++ + K         DRG   I   +++  +    K     AY  +K       
Sbjct: 121 LTTKAALKHMYKD--------DRGGVVIYMGSVHSHEASPLKS----AYVTAKHGLLGLA 168

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNL 255
             L  + A   V   VVCPG+  T L
Sbjct: 169 RVLAKEGAKHNVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 22/161 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           ++ KV +ITG   G+G   A+ LA+  A + L    +   QE LE+   E      ++  
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLAL----IDLNQEKLEEAVAECGALGTEVRG 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-----VPIKE-KLTTKEGYEVHF-- 163
              N+   + ++     + + + +++ LINNAG+      V  K+ K+T+K   E  F  
Sbjct: 59  YAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLE-QFQS 117

Query: 164 --GINHVGHFLLTN----LLIERIQKVVIVG-SSLMDRGTI 197
              +N  G FL        +IE   K VI+  SS+   G +
Sbjct: 118 VIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM 158

Length = 253

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
           + KV I+TGA  GIG   A+ LA+  A+VV+   +     E  E++ K++    G  + +
Sbjct: 5   DDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN----AEGAERVAKQIVADGGTAIAV 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK 150
           +++++  DS K  A   +  +  I  L+NNA +   +K
Sbjct: 61  QVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMK 98

Length = 250

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ---DGQIVL 111
           E K+ +ITGA   IG    K L    A ++L          ALE+LK+E+      +++ 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILA----DINAPALEQLKEELTNLYKNRVIA 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
           +EL++ S +SIK   ++ ++++ +I +LINNA  S 
Sbjct: 57  LELDITSKESIKELIESYLEKFGRIDILINNAYPSP 92

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQD------ 106
           ++G+V I+TGA  GIG   A   A   A VV+      + G  +     + V D      
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           G+ V    ++A +D   N     ++ +  + VL+NNAG+
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 17/197 (8%)

Query: 61  ITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFD 120
           ITGA SG+G   A   A+    + L   +   G+E L+ L++   DG       ++  + 
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQ--RCDVRDYS 62

Query: 121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER 180
            +   A+   +++  I V++NNAGV+     +  + E ++    IN +G           
Sbjct: 63  QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMG----------- 111

Query: 181 IQKVVIVGSSLMDR-GTIDFDNLNGEKGFVQ-KGHSNPAYCNSKLMNYYFGAELYLKYAD 238
           + K       L  R  +    N+    G +Q    S+  Y  +K         L ++ AD
Sbjct: 112 VVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSS--YNVAKAGVVALSETLLVELAD 169

Query: 239 KGVDVSVVCPGWCYTNL 255
             + V VVCP +  TNL
Sbjct: 170 DEIGVHVVCPSFFQTNL 186

Length = 270

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI--VL 111
           ++GK+ +ITGA+ GIG+  AK  AK  AT+V    +    QE ++K     ++  I    
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN----QELVDKGLAAYRELGIEAHG 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVG 169
              ++   D ++     + K+   I +L+NNAG+   +P+ E   + E +     I+   
Sbjct: 64  YVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLE--MSAEDFRQVIDIDLNA 121

Query: 170 HFLLTNL----LIERIQKVVIVGSSLM 192
            F+++      +I++    +I   S+M
Sbjct: 122 PFIVSKAVIPSMIKKGHGKIINICSMM 148

Length = 265

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 11/143 (7%)

Query: 52  KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGC-----RSMIRGQEALE--KLKK 102
             ++ KV ++TG +   GIG    KELA+  A +         + M  G +  E  +L++
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 103 EV-QDGQIV-LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE 160
           E+ ++G  V  MEL+L   D+ K     V +Q    H+L+NNA  S        T E  +
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELD 121

Query: 161 VHFGINHVGHFLLTNLLIERIQK 183
            H+ +N     LL++       K
Sbjct: 122 KHYMVNVRATTLLSSQFARGFDK 144

Length = 256

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 51/196 (26%), Positives = 76/196 (38%), Gaps = 29/196 (14%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             K  +ITGA SGIG   A+      A V             ++K  K    G    ++L
Sbjct: 4   MTKTVLITGAASGIGLAQARAFLAQGAQVY-----------GVDKQDKPDLSGNFHFLQL 52

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGHFLL 173
           +L+  D ++     V    P + +L N AG+    K  L T    ++  F  N    FLL
Sbjct: 53  DLS--DDLEPLFDWV----PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLL 106

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
           T   + +          +++R +    N+     FV  G    AY  SK     F  +L 
Sbjct: 107 TRAYLPQ----------MLERKSGIIINMCSIASFVAGG-GGAAYTASKHALAGFTKQLA 155

Query: 234 LKYADKGVDVSVVCPG 249
           L YA  G+ V  + PG
Sbjct: 156 LDYAKDGIQVFGIAPG 171

Length = 235

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 40/222 (18%)

Query: 49  PFYK---PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV- 104
           P YK    ++GKV +ITG +SGIG   A   AK  A + +     +   E   + K+ V 
Sbjct: 36  PNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAI---VYLDEHEDANETKQRVE 92

Query: 105 QDG-QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT--TKEGYEV 161
           ++G + +L+  +++     K+  +  +++  ++ +L+NNA    P ++ L   T E  + 
Sbjct: 93  KEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYP-QQSLEDITAEQLDK 151

Query: 162 HFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
            F  N   +F +T   +  +++    GS++++ G+I      G +G            N 
Sbjct: 152 TFKTNIYSYFHMTKAALPHLKQ----GSAIINTGSI-----TGYEG------------NE 190

Query: 222 KLMNYY--------FGAELYLKYADKGVDVSVVCPGWCYTNL 255
            L++Y         F   L      KG+ V+ V PG  +T L
Sbjct: 191 TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 44  KLKASPFYKP----MEGKVCIITGA-NSGIGYETAKELAKLKATVVLGCRSMIRGQEALE 98
            L  +P Y P    + GKV ++T A  +GIG  TA+   +  A VV+      R  E  +
Sbjct: 1   NLSTAPKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD 60

Query: 99  KLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           +L  E+  G++  +  ++ S   +       +++  ++ VL+NNAG
Sbjct: 61  ELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAG 106

Length = 262

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++ KV ++TG+  GIG   A  LAK  + VV+  +   +  E + +  K V++  G+ + 
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK---KRAEEMNETLKMVKENGGEGIG 60

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +  ++++ +  +  AK  + +Y    +L+NNAG+
Sbjct: 61  VLADVSTREGCETLAKATIDRYGVADILVNNAGL 94

Length = 252

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
              GKV ++TG++ GIG   A  LA+    + +   +  R ++A E+  +E++    + +
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAV---NYARSRKAAEETAEEIEALGRKAL 57

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNA--GVSVPIKE 151
            ++ N+   + IK     + +++ ++ V +NNA  GV  P  E
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAME 100

Length = 250

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 56  GKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           GK  +ITG   +  I +  AK L +  A +    +     +  +EKL + + +  +VL  
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKR-VEKLAERLGESALVL-P 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLI 140
            ++++ + IK     V K + K+  L+
Sbjct: 59  CDVSNDEEIKELFAEVKKDWGKLDGLV 85

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 50.5 bits (120), Expect = 5e-07
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 30/213 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GKV ++TGA+ GIG   AK LA   A V +   +  R +EA E+   E+Q   G    
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN--RKEEA-EETVYEIQSNGGSAFS 58

Query: 112 MELNLASFDSIKNFAKNVMKQY------PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
           +  NL S   ++    ++  +        K  +LINNAG+      + TT++ ++    +
Sbjct: 59  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSV 118

Query: 166 NHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           N    F +    + R++   +++ + S+       DF   +  KG +             
Sbjct: 119 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINT----------- 167

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            M +    +L      +G+ V+ + PG+  T++
Sbjct: 168 -MTFTLAKQL----GARGITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI--VLMEL 114
            V ++TGA   IG   A+ LA     VV+      R +   ++LK E+   +   VL++ 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYN---RSEAEAQRLKDELNALRNSAVLVQA 57

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +L+ F +  +      + + +  VL+NNA    P      +++ +   FGIN    +LL 
Sbjct: 58  DLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI 117

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 49.5 bits (119), Expect = 7e-07
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 11/98 (11%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEV-QDGQ--- 108
           ++ ++ ++TGA  GIG E A   A+  ATV+L G     R +E LE +  E+   G    
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLG-----RTEEKLEAVYDEIEAAGGPQP 64

Query: 109 -IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            I+ ++L  A+  + +  A  + +Q+ ++  +++NAG+
Sbjct: 65  AIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGL 102

Length = 247

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 49.5 bits (118), Expect = 7e-07
 Identities = 24/101 (23%), Positives = 54/101 (53%), Gaps = 9/101 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-----GQ 108
           +  ++ ++TGA+ GIG E A   A+  ATV+L    + R +E L ++   + +      Q
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVIL----LGRNEEKLRQVADHINEEGGRQPQ 57

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI 149
             +++L   + ++ +  A+ +   YP++  +++NAG+   +
Sbjct: 58  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDV 98

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 49.4 bits (118), Expect = 7e-07
 Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 25/197 (12%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GKV +IT A  GIG   A   A+  A V+    + I      EKLK+  +   I    L
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIA---TDINE----EKLKELERGPGITTRVL 53

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGHFLL 173
           ++   + +   AK       +I VL N AG  V     L  ++  ++    +N    +L+
Sbjct: 54  DVTDKEQVAALAKEE----GRIDVLFNCAGF-VHHGSILDCEDDDWDFAMNLNVRSMYLM 108

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP-AYCNSKLMNYYFGAEL 232
              ++ +          ++ R      N++     + KG  N   Y  +K         +
Sbjct: 109 IKAVLPK----------MLARKDGSIINMSSVASSI-KGVPNRFVYSTTKAAVIGLTKSV 157

Query: 233 YLKYADKGVDVSVVCPG 249
              +A +G+  + +CPG
Sbjct: 158 AADFAQQGIRCNAICPG 174

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           KP++G   ++TG  SGIG   A+  A+  A V +   S    + AL      +   ++  
Sbjct: 7   KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAKVTA 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYEVHFGINHVG 169
              ++A    ++      ++++  + VL+NNAG++ P    +++ T E +E    +N  G
Sbjct: 63  TVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEI-TPEQWEQTLAVNLNG 121

Query: 170 HFLLTN----LLIERIQKVVIVGSS 190
            F        LL       VI+  S
Sbjct: 122 QFYFARAAVPLLKASGHGGVIIALS 146

Length = 264

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 49.7 bits (119), Expect = 8e-07
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 24/201 (11%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             KV ++TGA  GIG+  AK L +    V +   +    Q A +KL K+   G+ + ++ 
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKA 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFL 172
           +++  D +    + V+  +  ++V++NNAGV  + PI+    T+E ++  + IN  G   
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIET--ITEEQFDKVYNINVGG--- 113

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH-SNPA---YCNSKLMNYYF 228
               +I  IQ        L   G I    +N      Q G   NP    Y ++K      
Sbjct: 114 ----VIWGIQAAQEAFKKLGHGGKI----INATS---QAGVVGNPELAVYSSTKFAVRGL 162

Query: 229 GAELYLKYADKGVDVSVVCPG 249
                   A +G+ V+   PG
Sbjct: 163 TQTAARDLASEGITVNAYAPG 183

Length = 256

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           + GK+ ++TGA+ GIG   AK LA+  A V++  R +    +  + +   +    G+   
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL----DGCQAVADAIVAAGGKAEA 61

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           +  ++   + I     ++ +++ ++ +L+NNA 
Sbjct: 62  LACHIGEMEQIDALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 49.5 bits (118), Expect = 9e-07
 Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 10/145 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
            P+  KV ++T +  GIG   A+ LA+  A VV+  R       A+  L+ E     +  
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE--GLSVTG 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVG 169
              ++   +  +      +  +  + +L++NA V+ P    +  +T+E ++    +N   
Sbjct: 64  TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVN-PFFGNILDSTEEVWDKILDVNVKA 122

Query: 170 HFLLTNLLIERIQK-----VVIVGS 189
             L+T  ++  ++K     VVIV S
Sbjct: 123 TALMTKAVVPEMEKRGGGSVVIVSS 147

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 20/175 (11%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQ 108
                KV +ITG    IG   A+ L      V +      R     + L  E+     G 
Sbjct: 2   MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYH---RSAAEADALAAELNALRPGS 58

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
              ++ +L   D++       +  + ++  L+NNA    P      T+  ++  F  N  
Sbjct: 59  AAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLK 118

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSK 222
             F L+     +++K          RG I +  +++ E+    KG+  P YC +K
Sbjct: 119 APFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPL--KGY--PVYCAAK 160

Length = 249

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 25/201 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV  ITG   G+G  TA  LA   A V L    + RG   L +    V    + +  
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVAL----IGRGAAPLSQTLPGVPADALRIGG 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF-- 171
           ++L    + +     V +Q+ ++  L+N AG  V         + ++  +G+N       
Sbjct: 61  IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120

Query: 172 ---LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
               L  L      ++V +G+                   ++ G    AY  +K      
Sbjct: 121 SKAALPALTASGGGRIVNIGAG----------------AALKAGPGMGAYAAAKAGVARL 164

Query: 229 GAELYLKYADKGVDVSVVCPG 249
              L  +  D+G+ V+ V P 
Sbjct: 165 TEALAAELLDRGITVNAVLPS 185

Length = 239

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 26/90 (28%), Positives = 44/90 (48%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  +ITGA   IG    K + +    V+          E LE L KE +  ++ L+E
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNA 143
           L++   +S++ F     ++Y KI   +N A
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           +P+ GKV ++TGA  GIG   A+ LA+  A VV  C  +    EAL  +   V  G    
Sbjct: 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAVANRV-GG--TA 260

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           + L++ + D+    A+++ +++  + ++++NAG+
Sbjct: 261 LALDITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ---DGQIVLM 112
           GK  +ITGA+ GIG   A+  A     + L  R      +ALE L  +++      + + 
Sbjct: 7   GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD----ADALEALAADLRAAHGVDVAVH 62

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
            L+L+S ++ +  A     +   I +L+NNAG
Sbjct: 63  ALDLSSPEAREQLA----AEAGDIDILVNNAG 90

Length = 259

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
            +  KV I+TGA+ GIG   A+ LA     V +         + L   + E   G+ + +
Sbjct: 2   TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVA-EIEAAGGRAIAV 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           + ++A   ++          + +I VL+NNAGV           E ++     N  G F+
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFV 120

Length = 245

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 22/201 (10%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             +V ++ G    +G      LA+    V +   +  +     +++  E  +G       
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFL 172
           +  S  S+   ++ V + + ++ +L+ NAG+  +  I +       ++    +N VG+FL
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITD--FQLGDFDRSLQVNLVGYFL 118

Query: 173 ----LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
                + L+I    +  I+              +N + G V   H N  Y  +K      
Sbjct: 119 CAREFSRLMIRDGIQGRII-------------QINSKSGKVGSKH-NSGYSAAKFGGVGL 164

Query: 229 GAELYLKYADKGVDVSVVCPG 249
              L L  A+ G+ V  +  G
Sbjct: 165 TQSLALDLAEYGITVHSLMLG 185

Length = 259

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 48/220 (21%), Positives = 79/220 (35%), Gaps = 49/220 (22%)

Query: 49  PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ 108
            F+  + GK  ++TG   GIG  T   L +  A VV   RS             +     
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR-----------PDDLPEG 50

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP-------IKEKLTTKEGYEV 161
           +  +  +L + +     A+ V+++   + +L++  G S         + ++    E    
Sbjct: 51  VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDE---- 106

Query: 162 HFGINHVGHFLLTNLL----IERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
              +N +    L   L    I R   V+I  +S+  R  +                S  A
Sbjct: 107 -LNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL--------------PESTTA 151

Query: 218 YCNSK--LMNYYFG--AELYLKYADKGVDVSVVCPGWCYT 253
           Y  +K  L  Y      E+    A KGV V+ V PGW  T
Sbjct: 152 YAAAKAALSTYSKSLSKEV----APKGVRVNTVSPGWIET 187

Length = 260

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 5e-06
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 20/153 (13%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQ-- 108
             +  K  ++TGA+ G+G + AK  A   ATV+L    + R Q+ LEK+    V+ G   
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVIL----VARHQKKLEKVYDAIVEAGHPE 57

Query: 109 --IVLMELNLASFDSIKNFAKNVMKQYP-KIHVLINNAG---VSVPIKEKLTTKEGYEVH 162
              +  +L  A     + FA  + +    K+  +++ AG      P+  +  T   +   
Sbjct: 58  PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQ--TVAEWVNQ 115

Query: 163 FGINHVGHFLLTNLLIERIQK-----VVIVGSS 190
           + IN V    LT  L   +++     V+ VG S
Sbjct: 116 YRINTVAPMGLTRALFPLLKQSPDASVIFVGES 148

Length = 239

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
            GKV ++TGA  GIG   A   A   A VVL  RS     E + ++  E++   G+ + +
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-----ELVHEVAAELRAAGGEALAL 61

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
             +L ++   +      ++ + +I VLINN G
Sbjct: 62  TADLETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 46.8 bits (112), Expect = 5e-06
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 66  SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNF 125
           + I +  AK  A+  A VVL          A+++L KE+     V + L++ S + I   
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKEL--PADV-IPLDVTSDEDIDEL 62

Query: 126 AKNVMKQYPKIHVLINNAGVSVPIK 150
            + V +   KI  L+++  +S  I+
Sbjct: 63  FEKVKEDGGKIDFLVHSIAMSPEIR 87

Length = 239

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
           GK  ++TG++ GIG +TAK LA   A VV+  R          K+  E++   G+   + 
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ---KAPRANKVVAEIEAAGGRASAVG 62

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNA 143
            +L   +S+        +++  +  L+ NA
Sbjct: 63  ADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 7e-06
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLM 112
           M  KV  ITGA+SGIG   A+E A+  AT+ L  R   R  +AL+     +    ++ + 
Sbjct: 1   MPLKV-FITGASSGIGQALAREYARQGATLGLVAR---RT-DALQAFAARLPKAARVSVY 55

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
             ++   D++   A + +  +    V+I NAG+SV
Sbjct: 56  AADVRDADALAAAAADFIAAHGLPDVVIANAGISV 90

Length = 257

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 26/176 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVL 111
           ++ +V ++TGA  G+G   A   A+  A V++  R+    +  L+++ ++++    +  +
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART----ESQLDEVAEQIRAAGRRAHV 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           +  +LA  ++    A   ++ + ++ +++NN G ++P     T+ +     F  N     
Sbjct: 64  VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123

Query: 172 LLTN----LLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
            LT     L++E      VI  SS M R       L G +GF        AY  +K
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGR-------LAG-RGFA-------AYGTAK 164

Length = 263

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 46.4 bits (110), Expect = 8e-06
 Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 32/210 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVV-LGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           + GKV IITG N+G+G   A  LAK  A +V +G       Q  +E L ++        +
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFH-----FI 60

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT--TKEGYEVHFGINHVGH 170
             +L     I +     ++    I +LINNAG+    ++ L     + ++    IN    
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIR--RQDLLEFGNKDWDDVININQKTV 118

Query: 171 FLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           F L+  + ++        K++ + S L  +G I                  P+Y  SK  
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV----------------PSYTASKSA 162

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
                  L  + +   ++V+ + PG+  T+
Sbjct: 163 VMGLTRALATELSQYNINVNAIAPGYMATD 192

Length = 251

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 8e-06
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  +ITG+  GIG+  A  LA+  A +++   +  R + A+ KL++E    +     
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAP 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            N+     ++   +++ K    I VLINNAG+
Sbjct: 65  FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.4 bits (111), Expect = 9e-06
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              K  +ITG +SG G   A+        VV   RS    +   E L       + +   
Sbjct: 2   SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS-EAARADFEALHP----DRALARL 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           L++  FD+I     +    +  I VL+NNAG
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAG 87

Length = 277

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 46.3 bits (110), Expect = 9e-06
 Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 20/198 (10%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           I+TGA  GIG   A+ L +  ATV+          + L  +        + L  L++A  
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVI--------ALD-LPFVLLLEYGDPLRLTPLDVADA 52

Query: 120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIE 179
            +++     ++ ++  I  L+N AGV  P      + E +E  F +N  G F   NLL  
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVF---NLL-- 107

Query: 180 RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADK 239
             Q V      + DR T     +      V +  S  AY  SK         L L+ A  
Sbjct: 108 --QAVA---PHMKDRRTGAIVTVASNAAHVPRI-SMAAYGASKAALASLSKCLGLELAPY 161

Query: 240 GVDVSVVCPGWCYTNLFR 257
           GV  +VV PG   T + R
Sbjct: 162 GVRCNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 30/201 (14%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV I+TG   GIG +   +  +    VV       RG +  E     +       +  +
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNL-----FFVHGD 55

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +A    +K     ++++  +I VL+NNA   S  I   L  +E ++    +N  G + L+
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEE-WDRILSVNLTGPYELS 114

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
               + + K         ++G I   N+   + F Q    + AY  SK      G  + L
Sbjct: 115 RYCRDELIK---------NKGRI--INIASTRAF-QSEPDSEAYAASK------GGLVAL 156

Query: 235 KYA---DKGVDVSVVC--PGW 250
            +A     G D+ V C  PGW
Sbjct: 157 THALAMSLGPDIRVNCISPGW 177

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 24/108 (22%)

Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK---- 102
              F   + G+V ++TG+  G+G+E A+ LA   A V++  R+    + A+  L+     
Sbjct: 4   LQRF--SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA 61

Query: 103 ------EVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
                 ++ D + V      A+F  I         ++ ++ +L+NN G
Sbjct: 62  AEALAFDIADEEAV-----AAAFARI-------DAEHGRLDILVNNVG 97

Length = 256

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 18/128 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCR--SMIRGQEALEKLKKEVQDGQIVL 111
           + G+V +ITG  SGIG       A ++  +  G R   + R  E L  L++   D  +++
Sbjct: 4   LHGQVALITGGGSGIG------RALVERFLAEGARVAVLERSAEKLASLRQRFGDH-VLV 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIK----EKLTTKEGYEVHFG 164
           +E ++ S+   +      +  + K+   + NAG+   +  +     E L     ++  F 
Sbjct: 57  VEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLD--TAFDEIFN 114

Query: 165 INHVGHFL 172
           +N  G+ L
Sbjct: 115 VNVKGYLL 122

Length = 263

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV I+TGA +GIG   A  LA+  A VV+        Q  + ++      G  + + 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI-----AGGALALR 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINHVGH 170
           +++     +    +  ++++  + +L+NNAG    +  I +  T    ++    IN  G 
Sbjct: 56  VDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIID--TDLAVWDQTMAINLRGT 113

Query: 171 FLLTNLLIERI 181
           FL       R+
Sbjct: 114 FLCCRHAAPRM 124

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 58  VCIITGANSGIGYETAKELAK-LKA---TVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           VC++TGA+ G G   A+ELAK LK+    +VL  R+    ++   ++  E    ++V + 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 114 LNLASFDSIKNFAKNVM-----KQYPKIHVLINNAG 144
           L+L +   ++   K +      K   ++ +LINNAG
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAG 96

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 47/212 (22%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--ME 113
            K  +ITGA SG G E A  LA+    V+ G +  I  Q  +  L+ E     + L   +
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQ--IAPQ--VTALRAEAARRGLALRVEK 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-------VPIKEKLTTKEGYEVHFGIN 166
           L+L         A     ++  + VL+NNAG+        +P++     +E +E     N
Sbjct: 58  LDLTDAIDRAQAA-----EW-DVDVLLNNAGIGEAGAVVDIPVE---LVRELFET----N 104

Query: 167 HVGHFLLTNLLIERI-----QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G   LT   + ++      KVV   SS+    T  F                 AYC S
Sbjct: 105 VFGPLELTQGFVRKMVARGKGKVVFT-SSMAGLITGPFTG---------------AYCAS 148

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
           K         ++ +    G+ V+ V PG   T
Sbjct: 149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  ++TG++ GIGY  A+ LA+  A V+L  R   +   A E LK +      +  +
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           +     D+++        +   I +L+NNAG
Sbjct: 68  VTDH--DAVRAAIDAFEAEIGPIDILVNNAG 96

Length = 255

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 30/200 (15%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           K  ++TGA+ GIG  TA+ L      V +  R   R   A  +         ++ +  ++
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQEL-----EGVLGLAGDV 55

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLT 174
                ++     + + +  +  L+NNAGV V  P++E   T E + +    N  G F   
Sbjct: 56  RDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEE--LTPEEWRLVLDTNLTGAFYCI 113

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           +     + +     +V VGS            L G+  F  KG +  AY  SK       
Sbjct: 114 HKAAPALLRRGGGTIVNVGS------------LAGKNAF--KGGA--AYNASKFGLLGLS 157

Query: 230 AELYLKYADKGVDVSVVCPG 249
               L   +  + V  V PG
Sbjct: 158 EAAMLDLREANIRVVNVMPG 177

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 34/201 (16%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           K  +ITG +SGIG E A EL +    V+  CR      + + ++      G    + L+L
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRK----PDDVARMNSLGFTG----ILLDL 54

Query: 117 ASFDSIKNFAKNVMK-QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
              +S++  A  V+     +++ L NNAG  V       +++  E  F  N  G   LT 
Sbjct: 55  DDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTM 114

Query: 176 LLIERI----QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AYCNSKLMNYYF 228
           LL+  +    +  +++ SS+M  G I                S P   AY  SK     +
Sbjct: 115 LLLPAMLPHGEGRIVMTSSVM--GLI----------------STPGRGAYAASKYALEAW 156

Query: 229 GAELYLKYADKGVDVSVVCPG 249
              L ++    G+ VS++ PG
Sbjct: 157 SDALRMELRHSGIKVSLIEPG 177

Length = 256

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVLM 112
           +GKV ++TG   G+G   A+  A+  A  ++ C    R  E  E    E++    + V +
Sbjct: 5   DGKVALVTGGTQGLGAAIARAFAERGAAGLVICG---RNAEKGEAQAAELEALGAKAVFV 61

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGH 170
           + +L+  +  +       + + ++  L+N AG++    I +  T+ E ++ HF +N    
Sbjct: 62  QADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILD--TSPELFDRHFAVNVRAP 119

Query: 171 FLL 173
           F L
Sbjct: 120 FFL 122

Length = 260

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
           KV IITGA+ GIG  TA  LA  +   V  C + +R ++A E + + ++   G+ + +  
Sbjct: 3   KVMIITGASRGIGAATAL-LAAERGYAV--CLNYLRNRDAAEAVVQAIRRQGGEALAVAA 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH--FGINHVGHFL 172
           ++A    +    + V ++  ++  L+NNAG+ +  + +L   +   +   F  N VG FL
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGI-LEAQMRLEQMDAARLTRIFATNVVGSFL 118

Query: 173 LTNLLIERI 181
                ++R+
Sbjct: 119 CAREAVKRM 127

Length = 248

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVL 111
            + GKV ++TGA +G+G   A  LA+L ATVV+    S +   + L++++        V 
Sbjct: 9   DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 112 MEL-NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINH 167
            ++   A+ D +   A         + +++NNAG+    ++++    + E ++    ++ 
Sbjct: 69  GDISQRATADELVATAVG----LGGLDIVVNNAGI---TRDRMLFNMSDEEWDAVIAVHL 121

Query: 168 VGHFLLT 174
            GHFLLT
Sbjct: 122 RGHFLLT 128

Length = 306

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 30/209 (14%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLA 117
           ++TG + GIG   A  LA+  A VV+  R   + ++A  ++  E+    G+ V++  +++
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYR---KSKDAAAEVAAEIEELGGKAVVVRADVS 58

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNA--GVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
               ++     V +++ ++ VL++NA  G   P+ E LT    ++     N         
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSE-LTPAH-WDAKMNTNLKALVHCAQ 116

Query: 176 ----LLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
               L+ ER   ++V + S    R   ++  +   K  ++      A         Y   
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALE------ALVR------YLAV 164

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
           EL      +G+ V+ V PG   T+   H 
Sbjct: 165 EL----GPRGIRVNAVSPGVIDTDALAHF 189

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 46  KASPFYKPMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMI--RGQEALEKLKK 102
            AS   KP  G V ++TG   GIG   A+ LA+   A +VL  RS +    +   + L  
Sbjct: 197 AASAPLKP--GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAA 254

Query: 103 -EVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            E    +++ +  ++    +++   + V ++Y  I  +I+ AGV
Sbjct: 255 LEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 14/93 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKE-LAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           ++GKV ++TGAN GIG    ++ LA+  A V    R         E +       ++V +
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------PESVTD--LGPRVVPL 54

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +L++    S+   A    +    + +L+NNAG+
Sbjct: 55  QLDVTDPASVAAAA----EAASDVTILVNNAGI 83

Length = 238

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 24/209 (11%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           + GK  +ITGA++GIG   A    +  A V +  R +    +ALEKL  E+    G++V 
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL----DALEKLADEIGTSGGKVVP 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG-VSVPIKEKLTTKEGYEVHFGINHVGH 170
           +  +++    + +    V  +   I + + NAG ++V     +  +E   +    N  G 
Sbjct: 63  VCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQ-NTNVTGV 121

Query: 171 FLLTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           FL        ++++ Q  VI+ ++ M    I+           Q  H    YC SK    
Sbjct: 122 FLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ--------QVSH----YCASKAAVI 169

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           +    + ++ A   + V+ V PG+  T L
Sbjct: 170 HLTKAMAVELAPHKIRVNSVSPGYILTEL 198

Length = 253

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           + GK+ ++TGA+ GIG   A +L +  ATV +  R++      L    +E++   G+ + 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTI---LPQLPGTAEEIEARGGKCIP 57

Query: 112 MELNLASFDSIKN-FAKNVMKQYPKIHVLINNA 143
           +  + +  D ++  F +   +Q  ++ +L+NNA
Sbjct: 58  VRCDHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 43.4 bits (102), Expect = 9e-05
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           G+  +ITG  SGIG  T  E A+  A VVLG       ++A+  L+ E  D   V+ ++ 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKE 151
               + + + A    +    + V+ +NAG+ V  PI E
Sbjct: 66  --HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVE 101

Length = 275

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-QIVLM 112
           +EGKV ++TG ++G+G   A  LA+    +V      I   E  E +++    G + + +
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIV-----GINIVEPTETIEQVTALGRRFLSL 62

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             +L   D I    +  + ++  I +L+NNAG+
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +V ++TGA+ G+G   A+  A+  A VV+      R  E+ E +  E    + + ++ ++
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYY---RSTESAEAVAAEAG-ERAIAIQADV 56

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNA 143
              D ++   +     +  +  ++NNA
Sbjct: 57  RDRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 23/119 (19%)

Query: 54  MEGKVCIITG--ANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD----- 106
           +EGK  +I G   N  I +  AK LA+  A +    +         E+L+K V++     
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQG--------ERLEKRVEELAEEL 55

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL------TTKEGY 159
           G  +++  ++ + +SI      + K++ K+  L+++   + P KE+L      T++EG+
Sbjct: 56  GSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFA-P-KEELKGDYLDTSREGF 112

Length = 259

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 35/204 (17%), Positives = 61/204 (29%), Gaps = 16/204 (7%)

Query: 60  IITGANSG-IGYETAKELAKLKATVVLGCRSMIRGQE---ALEKLKKEVQDGQIVLMELN 115
           +ITGA  G IG E  + L    A V +      R                   ++++  N
Sbjct: 2   LITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVLIVVPFN 61

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
             S    ++     +  Y  ++ L  +  +  P      T          + V H ++  
Sbjct: 62  QGS---KQDVEALAIGIYDTVNGLGWDLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLT 118

Query: 176 LLIERIQKVVIVGSSLMDRGTIDFDNL----NGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            L+ R + +V +   L  + T     +         F      + AY  SKL        
Sbjct: 119 NLL-RPKGLVKIQKQLRGQETRPAQVILPFSPNHGTF----GDDGAYSESKLHLETLFNR 173

Query: 232 LYLKYADKGVDVSVVCPGWCYTNL 255
              +     + V     GW    L
Sbjct: 174 WASESWGNDLTVCGAHIGWTRGTL 197

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 26/208 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++G+V  +TGA SGIG   A  LA+  A V L      R  + L +  + ++    + + 
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAETAEHIEAAGRRAIQ 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVG 169
           +  ++ S   ++        +   + + +N AG+  + P +E    +E ++    IN  G
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEE--MEEEQWQTVMDINLTG 120

Query: 170 HFLL----TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            FL        ++E      IV  + M  G I           V +G     Y  SK   
Sbjct: 121 VFLSCQAEARAMLEN-GGGSIVNIASMS-GII-----------VNRGLLQAHYNASKAGV 167

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYT 253
            +    L +++  +G+ V+ + PG+  T
Sbjct: 168 IHLSKSLAMEWVGRGIRVNSISPGYTAT 195

Length = 254

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVLM 112
           ++GK   I G + G+GY  A    K  A V +  R+    +  L+++KK +   G I  +
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN----ENKLKRMKKTLSKYGNIHYV 58

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
             +++S +S +N  +   K    I  L+   G
Sbjct: 59  VGDVSSTESARNVIEKAAKVLNAIDGLVVTVG 90

Length = 238

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
             + GKV I+TG  + IG   A+ L    A V +       G      L       +   
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARF 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNA 143
           +  ++    +I+     V+ ++ ++ +L+N A
Sbjct: 57  IATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 29/206 (14%)

Query: 57  KVCIITGANSGIGYETAKELA---KLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
            V +ITG +SGIG   A  LA     +  V    R + + +  L +    +  G +  ++
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKK-KGRLWEAAGALAGGTLETLQ 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           L++    S+   A   + +   + VL+ NAGV +  P+ E L+      V F +N  G  
Sbjct: 60  LDVCDSKSVAA-AVERVTE-RHVDVLVCNAGVGLLGPL-EALSEDAMASV-FDVNVFGTV 115

Query: 172 LLTNLLI----ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            +    +     R    ++V SS+     + F               N  YC SK     
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGLQGLPF---------------NDVYCASKFALEG 160

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYT 253
               L ++     V +S++  G  +T
Sbjct: 161 LCESLAVQLLPFNVHLSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 33/175 (18%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           IITG + G+G   A +L +    V+    S+ R +        E  +  +    L+L   
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVI----SISRTENKELTKLAEQYNSNLTFHSLDLQDV 60

Query: 120 DSIKNFAKNVMKQ-----YPKIHVLINNAGVSVPIK--EKLTTKEGYEVHFGINHVGHFL 172
             ++     ++          IH LINNAG+  PIK  EK  ++E    +  +N +   +
Sbjct: 61  HELETNFNEILSSIQEDNVSSIH-LINNAGMVAPIKPIEKAESEELIT-NVHLNLLAPMI 118

Query: 173 LTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           LT+  ++  +     K VI  SS             G       G S  AYC+SK
Sbjct: 119 LTSTFMKHTKDWKVDKRVINISS-------------GAAKNPYFGWS--AYCSSK 158

Length = 251

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 15/138 (10%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK-------KEVQD-- 106
           GK   ITGA+ GIG   A + A+  A VV+  ++     E   KL        +E++   
Sbjct: 3   GKTLFITGASRGIGKAIALKAARDGANVVIAAKT----AEPHPKLPGTIYTAAEEIEAAG 58

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNA-GVSVPIKEKLTTKEGYEVHFGI 165
           G+ +   +++   D ++   +  ++++  I +L+NNA  +S+        K  Y++  G+
Sbjct: 59  GKALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKR-YDLMMGV 117

Query: 166 NHVGHFLLTNLLIERIQK 183
           N  G +L +   +  ++K
Sbjct: 118 NTRGTYLCSKACLPYLKK 135

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 38/215 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVL 111
           ++ +  ++TG +SGIG   A   A+  A V +    +   +E  + +KK +++   + VL
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAIS--YLPVEEEDAQDVKKIIEECGRKAVL 104

Query: 112 MELNLASFDSIKNFAKNVMKQYPK------IHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
           +  +L    S + FA++++ +  K      I  L+    V++P    LT+ E ++  F I
Sbjct: 105 LPGDL----SDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTS-EQFQKTFAI 159

Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP-----AYCN 220
           N    F LT   I  + K    G+S++   +I            Q    +P     A   
Sbjct: 160 NVFALFWLTQEAIPLLPK----GASIITTSSI------------QAYQPSPHLLDYAATK 203

Query: 221 SKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           + ++NY  G  L  + A+KG+ V++V PG  +T L
Sbjct: 204 AAILNYSRG--LAKQVAEKGIRVNIVAPGPIWTAL 236

Length = 294

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQ-IVLMEL 114
           +V I+T ++SGIG   A  LA+    + +   S    +E  ++  +EV+  G    + +L
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHS---DEEGAKETAEEVRSHGVRAEIRQL 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +L+           ++++  +I VL+NNAG 
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGA 90

Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 13/95 (13%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
              ++ KV I+TG + GIG      L +  + V+                 KE     + 
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI-------------KEPSYNDVD 47

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             ++++++ + +      V+ +Y +I +L+NNAG+
Sbjct: 48  YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI 82

Length = 258

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 45/220 (20%), Positives = 84/220 (38%), Gaps = 47/220 (21%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSMIR-------GQEALEKLKK-- 102
           +EGKV  ITGA  G G   A  LA   A ++    C  +          +E L++  +  
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 103 EVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYE 160
           E    +++  + ++     ++   ++ ++Q+ ++ V++ NAGV       E   ++E ++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWE--LSEEQWD 118

Query: 161 VHFGINHVGHFLLTN----LLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS 214
               IN  G +         +IER     ++I  S              G K      H 
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSV------------AGLKALPGLAH- 165

Query: 215 NPAYCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPG 249
              Y  +K     L        L  + A+ G+ V+ + P 
Sbjct: 166 ---YAAAKHGLVGLTK-----TLANELAEYGIRVNSIHPY 197

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA 117
           V  + GA  G+G   A+  A    +V L  R      EAL         G    +  +  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARR-EAKLEALLVDIIRDAGGSAKAVPTDAR 59

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
             D +      + ++   + VL+ NAG +V  PI E  TT   +E  + +   G FL
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILE--TTPRVFEKVWEMAAFGGFL 114

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 61  ITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFD 120
           ITGA SGIG  TA   A     V     +    +  L  L  E+  G      L++    
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDIN----EAGLAALAAELGAGNAWTGALDVTDRA 61

Query: 121 S----IKNFAKNVMKQYPKIHVLINNAGV 145
           +    + +FA        ++ VL NNAG+
Sbjct: 62  AWDAALADFAAATGG---RLDVLFNNAGI 87

Length = 260

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G+V +ITG  SG+G    +      A V +    + R  E + +L+ +  D  +V +E
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAV----LDRSAEKVAELRADFGD-AVVGVE 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--------SVPIKEKLTTKEGYEVHFGI 165
            ++ S    +      ++++ K+   I NAG+         +P +EKL   E ++  F I
Sbjct: 57  GDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIP-EEKLD--EAFDELFHI 113

Query: 166 NHVGHFL 172
           N  G+ L
Sbjct: 114 NVKGYIL 120

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 8/127 (6%)

Query: 240 GVDVSVVCPGWC-YTNLFRHADIKFYQKVM---IFPIAMMVVIVGSSLMDRGTIDFDNLN 295
            +D+ V   G             + + +V+   +    ++       +  +  ++  ++ 
Sbjct: 86  RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVA 145

Query: 296 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKF 355
           G  G         AY  SK         L L+ A +G+ V  V PG+  T +    +   
Sbjct: 146 GLGG----PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE 201

Query: 356 YQKVMIF 362
            + +   
Sbjct: 202 LEALKRL 208

Length = 251

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 15/133 (11%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK-------KEV 104
             + GK   ITGA+ GIG   A   A+  A +V+  ++     E   KL        +E+
Sbjct: 2   MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT----AEPHPKLPGTIHTAAEEI 57

Query: 105 QD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG-VSVPIKEKLTTKEGYEV 161
           +   GQ + +  ++   D +       ++++  I + +NNA  +++   E    K  +++
Sbjct: 58  EAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKR-FDL 116

Query: 162 HFGINHVGHFLLT 174
              IN  G FL++
Sbjct: 117 MQQINVRGTFLVS 129

Length = 273

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 12/90 (13%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV-LMEL 114
           G+V ++TG   GIG   A+      ATVV+  R              E  DG+       
Sbjct: 6   GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR-----------APETVDGRPAEFHAA 54

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           ++   D +      +++++ ++ VL+NNAG
Sbjct: 55  DVRDPDQVAALVDAIVERHGRLDVLVNNAG 84

Length = 252

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 38/204 (18%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           +ITGA SGIG + A + AK    V+  C    R Q  L++L    Q   I  +  ++   
Sbjct: 5   LITGATSGIGKQLALDYAKQGWQVI-ACG---RNQSVLDEL--HTQSANIFTLAFDVTDH 58

Query: 120 DSIKNFAKNVMKQYPKI-HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLI 178
                  K  + Q P I  + I NAG    + +           F +N +G   + N  I
Sbjct: 59  PG----TKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLG---VAN-CI 110

Query: 179 ERIQ-------KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           E IQ       +VVIVGS            +  E    +      AY  SK    YF   
Sbjct: 111 EGIQPHLSCGHRVVIVGS------------IASELALPRA----EAYGASKAAVAYFART 154

Query: 232 LYLKYADKGVDVSVVCPGWCYTNL 255
           L L    KG++V  V PG+  T L
Sbjct: 155 LQLDLRPKGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
           KV +ITGA+ GIG  TA   A    +V +      R   A E+    V+   G+  ++  
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYA---RDAAAAEETADAVRAAGGRACVVAG 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP 148
           ++A+   +      V   + ++  L+NNAG+  P
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAGIVAP 93

Length = 248

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 48/222 (21%), Positives = 74/222 (33%), Gaps = 61/222 (27%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           +ITGA SGIG  TA+ L     TV+                  ++++  +     +L++ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI----------------GIDLREADV---IADLSTP 43

Query: 120 DSIKN-FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLI 178
           +      A  + +    +  L+N AGV       L  K  Y   FG+       L   L+
Sbjct: 44  EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLKVNY---FGLRA-----LMEALL 95

Query: 179 ERIQK-----VVIVGSSLMDRGTIDFDNL-----NGEKGFV-----QKGH-SNPAYCNSK 222
            R++K      V+V S        D   L      G +          G     AY  SK
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 223 LMNYYFGAELYLKYADK---------GVDVSVVCPGWCYTNL 255
                   E    +  +         GV V+ V PG   T +
Sbjct: 156 --------EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPI 189

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCY 344
           E     +      Y  SKL+         L+ A +G+DV +V P   +
Sbjct: 125 ETTPWNERPFPNDYYRSKLL----AELEVLEAAAEGLDVVIVNPSAVF 168

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 39/219 (17%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELN 115
            + ++TG + GIG  TA  LA+   TV +   +++   QE +  +      G+  +++ +
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI--TQAGGKAFVLQAD 59

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           ++  + +      + +    +  L+NNAG+  +    E LT +    V    N  G+FL 
Sbjct: 60  ISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRV-LSTNVTGYFLC 118

Query: 174 TNLLIERIQK--------VVIVGSSLMDRGT----IDFDNLNGEKGFVQKGHSNPAYCNS 221
               ++R+          +V V S+    G     +D+    G    +  G         
Sbjct: 119 CREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTG--------- 169

Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
                     L L+ A +G+ V+ V PG+ YT +  HA 
Sbjct: 170 ----------LSLEVAAQGIRVNCVRPGFIYTEM--HAS 196

Length = 247

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 56/224 (25%), Positives = 86/224 (38%), Gaps = 47/224 (20%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  +ITG +SGIG   A+ L      V   CR       ALE       +G +   +L+ 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRK-EEDVAALE------AEG-LEAFQLDY 56

Query: 117 ASFDSIKNFAKNVMKQYP-KIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVG-HFLL 173
           A  +SI      V++    ++  L NN     P   E L T E     F  N  G H L 
Sbjct: 57  AEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPT-EALRAQFEANFFGWHDLT 115

Query: 174 TNLL-IERIQKV--VIVGSSLMDRGTIDFDNLNGEKGFVQ---KGHSNPAYCNSKLMNYY 227
             ++ + R Q    ++  SS++              G V    +G    AY  SK     
Sbjct: 116 RRVIPVMRKQGQGRIVQCSSIL--------------GLVPMKYRG----AYNASK----- 152

Query: 228 FGAE-----LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK 266
           F  E     L ++    G+ VS++ PG   T  FR   +  +++
Sbjct: 153 FAIEGLSLTLRMELQGSGIHVSLIEPGPIETR-FRANALAAFKR 195

Length = 277

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 5/90 (5%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA 117
           + ++TGA +G G    +   +    V+    +  R QE L++LK E+ D  + + +L++ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVI----ATGRRQERLQELKDELGD-NLYIAQLDVR 56

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
           +  +I+    ++  ++  I VL+NNAG+++
Sbjct: 57  NRAAIEEMLASLPAEWRNIDVLVNNAGLAL 86

Length = 248

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 46/216 (21%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           M  +  ++TGA  GIG   +  LA       LG + +   + A++    E       L  
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLAN------LGHQVIGIARSAIDDFPGE-------LFA 47

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGIN-----H 167
            +LA  +        + + +P +  ++NN G+++P    K+      +V + +N      
Sbjct: 48  CDLADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKIDLAALQDV-YDLNVRAAVQ 105

Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL---- 223
           V    L  + +    ++V +  S    G +D                  +Y  +K     
Sbjct: 106 VTQAFLEGMKLREQGRIVNI-CSRAIFGALD----------------RTSYSAAKSALVG 148

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
               +  EL    A+ G+ V+ V PG   T LFR  
Sbjct: 149 CTRTWALEL----AEYGITVNAVAPGPIETELFRQT 180

Length = 234

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 24/128 (18%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIV 110
            ++ +  +ITG + G+G   A  LA   A V++     +RG+   + +   +    G+ +
Sbjct: 3   SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL 62

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
            +  ++  F + +      ++++ ++ +L+NNAG++        + E ++    +N  G 
Sbjct: 63  GLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGF 122

Query: 171 FLLTNLLI 178
           F +T   +
Sbjct: 123 FNVTQAAL 130

Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205|consensus	282		100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201|consensus	300		100.0
KOG1200|consensus	256		100.0
KOG1208|consensus	314		100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725|consensus	270		100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
KOG4169|consensus	261		100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
KOG1610|consensus	322		100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1014|consensus	312		100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
KOG1207|consensus	245		100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	99.98
PRK05855	582	short chain dehydrogenase; Validated	99.98
PRK06940	275	short chain dehydrogenase; Provisional	99.98
PRK07024	257	short chain dehydrogenase; Provisional	99.98
PRK06182	273	short chain dehydrogenase; Validated	99.98
PRK06125	259	short chain dehydrogenase; Provisional	99.98
KOG1611|consensus	249		99.98
PRK06194	287	hypothetical protein; Provisional	99.98
KOG1209|consensus	289		99.98
PRK06949	258	short chain dehydrogenase; Provisional	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
PRK07856	252	short chain dehydrogenase; Provisional	99.98
PRK05650	270	short chain dehydrogenase; Provisional	99.98
PRK05717	255	oxidoreductase; Validated	99.98
PRK12744	257	short chain dehydrogenase; Provisional	99.98
PRK06500	249	short chain dehydrogenase; Provisional	99.98
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PRK06841	255	short chain dehydrogenase; Provisional	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK08226	263	short chain dehydrogenase; Provisional	99.97
PRK08628	258	short chain dehydrogenase; Provisional	99.97
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08703	239	short chain dehydrogenase; Provisional	99.97
PRK07576	264	short chain dehydrogenase; Provisional	99.97
PRK06523	260	short chain dehydrogenase; Provisional	99.97
PRK07890	258	short chain dehydrogenase; Provisional	99.97
PRK12937	245	short chain dehydrogenase; Provisional	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK07814	263	short chain dehydrogenase; Provisional	99.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.97
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK12939	250	short chain dehydrogenase; Provisional	99.97
PRK06138	252	short chain dehydrogenase; Provisional	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK06701	290	short chain dehydrogenase; Provisional	99.97
PRK06483	236	dihydromonapterin reductase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.97
PRK07454	241	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12742	237	oxidoreductase; Provisional	99.97
KOG1199|consensus	260		99.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.97
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.97
PRK07774	250	short chain dehydrogenase; Provisional	99.97
PRK06057	255	short chain dehydrogenase; Provisional	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK07069	251	short chain dehydrogenase; Validated	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
KOG1210|consensus	331		99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.96
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.96
PRK07102	243	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK10538	248	malonic semialdehyde reductase; Provisional	99.96
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12827	249	short chain dehydrogenase; Provisional	99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK07326	237	short chain dehydrogenase; Provisional	99.96
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.95
PRK06924	251	short chain dehydrogenase; Provisional	99.95
PRK07577	234	short chain dehydrogenase; Provisional	99.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.95
PRK09135	249	pteridine reductase; Provisional	99.95
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07060	245	short chain dehydrogenase; Provisional	99.95
PRK07023	243	short chain dehydrogenase; Provisional	99.95
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12828	239	short chain dehydrogenase; Provisional	99.95
PRK08324	681	short chain dehydrogenase; Validated	99.95
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.95
PRK07806	248	short chain dehydrogenase; Provisional	99.95
PRK07041	230	short chain dehydrogenase; Provisional	99.95
PRK12829	264	short chain dehydrogenase; Provisional	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.94
PRK12367	245	short chain dehydrogenase; Provisional	99.94
PRK08017	256	oxidoreductase; Provisional	99.94
PRK06953	222	short chain dehydrogenase; Provisional	99.93
KOG1478|consensus	341		99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
KOG1204|consensus	253		99.92
PRK08219	227	short chain dehydrogenase; Provisional	99.92
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN03209	576	translocon at the inner envelope of chloroplast su	99.83
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.83
PRK06720	169	hypothetical protein; Provisional	99.81
PLN02653	340	GDP-mannose 4,6-dehydratase	99.79
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PLN02650	351	dihydroflavonol-4-reductase	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.76
PLN02214	342	cinnamoyl-CoA reductase	99.76
PLN02583	297	cinnamoyl-CoA reductase	99.76
PLN02240	352	UDP-glucose 4-epimerase	99.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.76
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.76
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.73
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.73
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.72
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.7
PLN02686	367	cinnamoyl-CoA reductase	99.7
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.69
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.69
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.68
KOG1502|consensus	327		99.67
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.67
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.66
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.66
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.65
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.65
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.64
PLN02427	386	UDP-apiose/xylose synthase	99.63
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.6
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.58
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.58
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.57
KOG1371|consensus	343		99.57
PLN02206	442	UDP-glucuronate decarboxylase	99.56
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.56
PLN02260	668	probable rhamnose biosynthetic enzyme	99.55
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.55
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.54
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.53
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.52
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.51
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.51
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.42
PLN02996	491	fatty acyl-CoA reductase	99.38
KOG1430|consensus	361		99.36
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.36
PRK07201	657	short chain dehydrogenase; Provisional	99.35
CHL00194	317	ycf39 Ycf39; Provisional	99.35
KOG1429|consensus	350		99.35
PLN02778	298	3,5-epimerase/4-reductase	99.32
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.31
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.3
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.24
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.24
PLN02503	605	fatty acyl-CoA reductase 2	99.22
PRK05865	854	hypothetical protein; Provisional	99.18
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.17
PLN02260	668	probable rhamnose biosynthetic enzyme	99.14
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.14
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.13
PRK08309	177	short chain dehydrogenase; Provisional	99.08
KOG0747|consensus	331		99.06
KOG4022|consensus	236		99.02
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.97
KOG1208|consensus	314		98.94
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.86
PRK12320	699	hypothetical protein; Provisional	98.81
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.76
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
PLN00016	378	RNA-binding protein; Provisional	98.74
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.7
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.68
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.56
KOG1221|consensus	467		98.52
KOG1202|consensus	2376		98.52
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.32
KOG2865|consensus	391		98.3
KOG1203|consensus	411		98.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.19
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.17
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.17
KOG1372|consensus	376		98.17
PRK05854	313	short chain dehydrogenase; Provisional	98.15
KOG1431|consensus	315		98.14
KOG2733|consensus	423		98.07
KOG1200|consensus	256		98.03
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.01
KOG2774|consensus	366		97.99
PRK09620	229	hypothetical protein; Provisional	97.98
PRK06197	306	short chain dehydrogenase; Provisional	97.87
PLN00106	323	malate dehydrogenase	97.87
PRK14982	340	acyl-ACP reductase; Provisional	97.82
COG2910	211	Putative NADH-flavin reductase [General function p	97.81
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.76
KOG1611|consensus	249		97.73
PTZ00325	321	malate dehydrogenase; Provisional	97.73
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.69
PLN00015	308	protochlorophyllide reductase	97.67
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.64
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.63
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
KOG4039|consensus	238		97.63
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.6
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.6
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.6
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.58
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.57
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.57
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.57
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.56
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.51
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.5
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.49
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.48
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.44
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.43
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.41
PRK12747	252	short chain dehydrogenase; Provisional	97.4
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.37
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.33
PRK05599	246	hypothetical protein; Provisional	97.33
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.32
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.29
PRK06940	275	short chain dehydrogenase; Provisional	97.29
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.28
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.28
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.24
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.22
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.22
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.19
PRK08589	272	short chain dehydrogenase; Validated	97.15
PRK06196	315	oxidoreductase; Provisional	97.14
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.13
PRK06849	389	hypothetical protein; Provisional	97.12
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.1
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.09
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.08
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.07
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.05
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.04
PRK07478	254	short chain dehydrogenase; Provisional	97.03
PRK08339	263	short chain dehydrogenase; Provisional	97.03
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.02
COG3268	382	Uncharacterized conserved protein [Function unknow	97.01
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.01
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	97.01
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.99
PRK08303	305	short chain dehydrogenase; Provisional	96.98
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.97
PRK05884	223	short chain dehydrogenase; Provisional	96.97
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.95
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.95
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.94
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.94
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.93
PRK07063	260	short chain dehydrogenase; Provisional	96.92
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.91
PLN02780	320	ketoreductase/ oxidoreductase	96.91
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.86
PRK07035	252	short chain dehydrogenase; Provisional	96.86
KOG0725|consensus	270		96.85
KOG4169|consensus	261		96.84
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.84
PRK05086	312	malate dehydrogenase; Provisional	96.84
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.83
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.81
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.81
PRK12743	256	oxidoreductase; Provisional	96.8
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.79
PRK08265	261	short chain dehydrogenase; Provisional	96.79
PRK07062	265	short chain dehydrogenase; Provisional	96.78
PRK08177	225	short chain dehydrogenase; Provisional	96.78
PRK05867	253	short chain dehydrogenase; Provisional	96.77
PRK06128	300	oxidoreductase; Provisional	96.76
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.76
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.74
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.72
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.72
PRK05872	296	short chain dehydrogenase; Provisional	96.72
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.71
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.71
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.71
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.7
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.7
PRK05855	582	short chain dehydrogenase; Validated	96.7
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.7
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.7
PRK08643	256	acetoin reductase; Validated	96.69
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.68
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.67
PRK07791	286	short chain dehydrogenase; Provisional	96.67
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.65
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.63
PRK09242	257	tropinone reductase; Provisional	96.62
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.62
PRK07985	294	oxidoreductase; Provisional	96.61
PRK05993	277	short chain dehydrogenase; Provisional	96.59
COG1028	251	FabG Dehydrogenases with different specificities (	96.59
PRK06398	258	aldose dehydrogenase; Validated	96.59
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.55
KOG1198|consensus	347		96.54
PRK06172	253	short chain dehydrogenase; Provisional	96.53
PLN02253	280	xanthoxin dehydrogenase	96.48
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.48
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.47
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.47
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.46
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.46
PRK06841	255	short chain dehydrogenase; Provisional	96.46
PRK08862	227	short chain dehydrogenase; Provisional	96.45
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.44
PRK12742	237	oxidoreductase; Provisional	96.44
PRK07825	273	short chain dehydrogenase; Provisional	96.44
PRK06139	330	short chain dehydrogenase; Provisional	96.42
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.42
PRK07831	262	short chain dehydrogenase; Provisional	96.41
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.41
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.4
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.38
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.36
PRK05650	270	short chain dehydrogenase; Provisional	96.34
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.34
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.34
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.33
PRK06523	260	short chain dehydrogenase; Provisional	96.32
PRK08226	263	short chain dehydrogenase; Provisional	96.29
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.29
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.29
PRK12937	245	short chain dehydrogenase; Provisional	96.27
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.26
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.25
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.22
PRK08223	287	hypothetical protein; Validated	96.22
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.21
PRK07067	257	sorbitol dehydrogenase; Provisional	96.2
PRK08628	258	short chain dehydrogenase; Provisional	96.19
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.19
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.19
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.18
PRK05876	275	short chain dehydrogenase; Provisional	96.18
PRK06125	259	short chain dehydrogenase; Provisional	96.17
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.15
PRK06114	254	short chain dehydrogenase; Provisional	96.14
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.13
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.13
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.12
PRK14968	188	putative methyltransferase; Provisional	96.12
PRK08703	239	short chain dehydrogenase; Provisional	96.11
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.1
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.1
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.09
PRK12744	257	short chain dehydrogenase; Provisional	96.07
PRK05693	274	short chain dehydrogenase; Provisional	96.07
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.07
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.06
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.06
PRK08328	231	hypothetical protein; Provisional	96.04
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.03
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.02
PRK07904	253	short chain dehydrogenase; Provisional	96.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.0
PRK07069	251	short chain dehydrogenase; Validated	95.99
PRK06701	290	short chain dehydrogenase; Provisional	95.93
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.92
PRK07578	199	short chain dehydrogenase; Provisional	95.91
PRK09009	235	C factor cell-cell signaling protein; Provisional	95.91
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.9
PRK06483	236	dihydromonapterin reductase; Provisional	95.89
PRK06949	258	short chain dehydrogenase; Provisional	95.87
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.87
PLN00203	519	glutamyl-tRNA reductase	95.85
PRK12746	254	short chain dehydrogenase; Provisional	95.85

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.9e-41  Score=297.41  Aligned_cols=189  Identities=25%  Similarity=0.332  Sum_probs=180.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..+++++++|||||+|||+++|++|+++|++|++++|+.+++++..+++...+ +.++.++++|++++++++++.+++.+
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHh
Confidence            35788999999999999999999999999999999999999999999998876 57889999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ..+.||+||||||++..+++.+.+.++.++++++|+.+...++++++|.|.     .|||++|.++..+.|         
T Consensus        81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p---------  151 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP---------  151 (265)
T ss_pred             cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc---------
Confidence            989999999999999999999999999999999999999999999999995     599999999988876         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             ..+.|++||+++.+|+++|+.|++++||+|.+|+||+|+|++++
T Consensus       152 -------~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         152 -------YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence                   78899999999999999999999999999999999999999986

>KOG1205|consensus

Probab=100.00  E-value=6e-41  Score=300.31  Aligned_cols=190  Identities=28%  Similarity=0.334  Sum_probs=175.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++.||+|+|||||+|||+++|.+|+++|++++++.|..++++...+++++..+..+++.++||++|.++++++++++.+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999989998876555699999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+.......+.+.++++.+|++|++|+..++++++|+|+     +||++||.++..+.|         
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P---------  158 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP---------  158 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC---------
Confidence            999999999999998866777788999999999999999999999999997     699999999998876         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKG--VDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~  258 (384)
                             ..+.|++||+|+.+|+++|+.|+.+.+  |++ +|+||+|+|++...
T Consensus       159 -------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  159 -------FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             -------cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence                   566899999999999999999999877  566 99999999997643

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2e-40  Score=286.22  Aligned_cols=187  Identities=25%  Similarity=0.355  Sum_probs=173.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++|+++|||||||||.++|++|++.|++|++++|+.+++++..+++.+    +++..+..|++|.++++++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999998888887777643    57889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||.....++.+.+.++|++++++|+.|.++.+++++|.|.     .|||+||.++..+.+          
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~----------  148 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYP----------  148 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCC----------
Confidence            99999999999998778888999999999999999999999999999996     599999999988776          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +.+.|++||+++.+|++.|++|+..++|||.+|+||.|.|..+...
T Consensus       149 ------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v  194 (246)
T COG4221         149 ------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV  194 (246)
T ss_pred             ------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccc
Confidence                  7789999999999999999999999999999999999977665443

>KOG1201|consensus

Probab=100.00  E-value=2.1e-39  Score=287.18  Aligned_cols=188  Identities=27%  Similarity=0.423  Sum_probs=178.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+|++|+||||++|||+++|.+|+++|+++++.+.|.+..++..+++++.   ++++.+.||+||.+++.+.++++++
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999988765   4899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +.|++|+||||||+....++.+.+.+++++++++|+.|+++.+++++|.|.     +||+++|.+|..+.+         
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~---------  181 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA---------  181 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc---------
Confidence            999999999999998888999999999999999999999999999999996     699999999998877         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYA---DKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...||+||+|+.+|.++|..|+.   ..||+...|+|++++|.|.+.
T Consensus       182 -------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  182 -------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             -------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence                   778999999999999999999986   467999999999999999885

>KOG1200|consensus

Probab=100.00  E-value=1.2e-39  Score=268.12  Aligned_cols=218  Identities=23%  Similarity=0.276  Sum_probs=188.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++.|+++||||++|||+++++.|+++|++|++++++....++....+..   .+....+.||+++.++++..+++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHh
Confidence            46678999999999999999999999999999999997766666665532   146677999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +|++++||||||+.....+..+..++|+..+.+|+.|.|+++|++.+.|.       +|||+||..+..+..        
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~--------  159 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF--------  159 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc--------
Confidence            99999999999998888888889999999999999999999999998842       799999999988876        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH-HH------------H
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI-FP------------I  272 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~------------~  272 (384)
                              ++..|++||+++.+|+++.++|++.+|||||.|+||++.|||.+..+++...+... .|            +
T Consensus       160 --------GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~  231 (256)
T KOG1200|consen  160 --------GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANL  231 (256)
T ss_pred             --------cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHH
Confidence                    88899999999999999999999999999999999999999999999877666421 11            2


Q ss_pred             HHHHHhhcccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTI  289 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i  289 (384)
                      ..|+.+..++++++.++
T Consensus       232 V~fLAS~~ssYiTG~t~  248 (256)
T KOG1200|consen  232 VLFLASDASSYITGTTL  248 (256)
T ss_pred             HHHHhccccccccceeE
Confidence            25556666666666543

>KOG1208|consensus

Probab=100.00  E-value=3.2e-37  Score=284.34  Aligned_cols=265  Identities=34%  Similarity=0.486  Sum_probs=209.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.|++++||||++|||+++|++|+++|++|++.+|+.++.+++.+++++..+..++.+++||++|.++|+++++++.+
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            56889999999999999999999999999999999999999999999999877778899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|+||||||+..+..  ..+.|++|.+|.+|++|++.+++.++|.++     |||++||..+ ....++.++++..
T Consensus       111 ~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~  187 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEK  187 (314)
T ss_pred             cCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchh
Confidence            9999999999999966544  558899999999999999999999999997     8999999988 4445666666654


Q ss_pred             C--cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHHHHHHHHHHhhccccc
Q psy2854         207 G--FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLM  284 (384)
Q Consensus       207 ~--~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~  284 (384)
                      .  +.    ...+|+.||.++..+++.|++.+.+ ||.+++++||.+.|+...+  ..++.+.+..++..++..++...+
T Consensus       188 ~~~~~----~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~ks~~~ga  260 (314)
T KOG1208|consen  188 AKLYS----SDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLTKSPEQGA  260 (314)
T ss_pred             ccCcc----chhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec--chHHHHHHHHHHHHHhccCHHHHh
Confidence            3  33    5557999999999999999999987 9999999999999994433  233444455666666665555443


Q ss_pred             ccccc--cccccCCCcc-ccccCCCCccccccccccccchHHHHHHhhcCC
Q psy2854         285 DRGTI--DFDNLNGEKG-FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKG  332 (384)
Q Consensus       285 ~~~~i--~f~~l~g~~~-~~~~g~~~~~Y~~sKl~~~~~~~ela~~l~~~~  332 (384)
                      ....+  .=+++.+..+ |..++.      ...........++++++|+..
T Consensus       261 ~t~~~~a~~p~~~~~sg~y~~d~~------~~~~~~~a~d~~~~~~lw~~s  305 (314)
T KOG1208|consen  261 ATTCYAALSPELEGVSGKYFEDCA------IAEPSEEALDEELAEKLWKFS  305 (314)
T ss_pred             hheehhccCccccCcccccccccc------ccccccccCCHHHHHHHHHHH
Confidence            22111  1122333332 222221      122334577888999998853

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-36  Score=280.21  Aligned_cols=202  Identities=35%  Similarity=0.572  Sum_probs=176.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++.++.+++||++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999888888887765556789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +++++|+||||||+... +..+.+.++++.++++|+.|++.+++.++|.|+    +||++||.++..+..++.++....+
T Consensus        90 ~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~  168 (313)
T PRK05854         90 EGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERS  168 (313)
T ss_pred             hCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccccc
Confidence            99999999999998543 344568899999999999999999999999885    7999999988776655555554433


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKY--ADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +.    +...|+.||+|+..|+++|++++  .+.||+|++++||+++|++.+.
T Consensus       169 ~~----~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        169 YA----GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             Cc----chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence            32    67899999999999999999864  4678999999999999999754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-36  Score=277.93  Aligned_cols=186  Identities=18%  Similarity=0.170  Sum_probs=161.6

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.++.+ .. ..++||++|.++++++++++.
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHH
Confidence            3679999999997  8999999999999999999999985 33444555544432 23 678999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|+||||||+...    .++.+.+.++|++++++|+.|++++++.++|.|+   +||++||.++..+.+      
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------  152 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP------  152 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC------
Confidence            999999999999998542    4667789999999999999999999999999996   799999987655443      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                .+..|++||+|+.+|+++++.|++++||+||+|+||+|+|++.+
T Consensus       153 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        153 ----------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS  196 (274)
T ss_pred             ----------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence                      56789999999999999999999999999999999999998754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=274.50  Aligned_cols=186  Identities=18%  Similarity=0.181  Sum_probs=163.1

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|+ ++.++..+++.    ..++.+++||++|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLV----DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence            35789999999999  899999999999999999999998 34444444332    346788999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+..+    .++.+.+.++|++++++|+.+++.+++.++|+|+   +||++||..+..+.+     
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~-----  152 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP-----  152 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC-----
Confidence            9999999999999998643    5667789999999999999999999999999985   699999987765544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 .+.+|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       153 -----------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        153 -----------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             -----------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence                       667899999999999999999999999999999999999998654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-36  Score=274.74  Aligned_cols=187  Identities=16%  Similarity=0.157  Sum_probs=161.1

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+.+. .+..+++.+..  +....+++|++|+++++++++++.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~--g~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESL--GSDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhc--CCceEEeCCCCCHHHHHHHHHHHH
Confidence            36899999999996  99999999999999999999997543 33344444332  223578999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|+||||||+...    .++.+.+.++|++++++|+.++++++++++|+|+   +||++||..+..+.+      
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~------  154 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP------  154 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC------
Confidence            999999999999998543    3566789999999999999999999999999996   699999987765544      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                .+.+|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.
T Consensus       155 ----------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~  199 (271)
T PRK06505        155 ----------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG  199 (271)
T ss_pred             ----------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc
Confidence                      667899999999999999999999999999999999999998643

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-36  Score=273.60  Aligned_cols=187  Identities=19%  Similarity=0.213  Sum_probs=168.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++++. +
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            5789999999999999999999999999999999999888877777765432 3578899999999999999999985 5


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|+     +||++||.++..+.+          
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~----------  152 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP----------  152 (263)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC----------
Confidence            89999999999987767778889999999999999999999999999984     699999998765544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            ....|+++|+|+++|+++++.|++++|||||+|+||+++|++.+
T Consensus       153 ------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  196 (263)
T PRK08339        153 ------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVI  196 (263)
T ss_pred             ------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHH
Confidence                  66789999999999999999999999999999999999999854

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=271.40  Aligned_cols=188  Identities=14%  Similarity=0.131  Sum_probs=163.4

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.++..+.++..+++|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999997  8999999999999999999998863 223444555544434678889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSV----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|++|||||+..    ..++.+.+.++|++++++|+.+++.+++.++|+|.   +||++||..+..+.+      
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------  156 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ------  156 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC------
Confidence            99999999999999853    24566778999999999999999999999999996   699999988765544      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                .+.+|++||+|+++|+++++.|++++||+||+|+||+++|++.+
T Consensus       157 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  200 (257)
T PRK08594        157 ----------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK  200 (257)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence                      56789999999999999999999999999999999999999754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.2e-35  Score=271.34  Aligned_cols=187  Identities=14%  Similarity=0.102  Sum_probs=163.1

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+.  ..+..++++|++|++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHH
Confidence            4789999999986  89999999999999999999877643  345556666543  23567889999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~  201 (384)
                      +.+++|++|+||||||+...    .++.+.+.++|++++++|+.+++.+++.++|.|+   +||++||..+..+.+    
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----  156 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIP----  156 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCc----
Confidence            99999999999999998542    4677789999999999999999999999999996   799999987765544    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                  .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       157 ------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        157 ------------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS  200 (258)
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence                        66789999999999999999999999999999999999999864

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-35  Score=271.10  Aligned_cols=186  Identities=15%  Similarity=0.111  Sum_probs=161.9

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++||+++||||++  |||+++|++|+++|++|++++|+ ++.++..+++.++.+  ....++||++|+++++++++++.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~-~~~~~~~~~l~~~~g--~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS-EVLEKRVKPLAEEIG--CNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc-hHHHHHHHHHHHhcC--CceEEEccCCCHHHHHHHHHHHH
Confidence            57899999999997  99999999999999999999987 444555666655432  23467899999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|+||||||+...    .++.+.+.++|++++++|+.+++.+++.+.|.|+   +||++||..+..+.+      
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------  155 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP------  155 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC------
Confidence            999999999999998542    4566789999999999999999999999999986   799999987665443      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                .+..|++||+|+.+|+++++.|++++||+||+|+||.++|++.+
T Consensus       156 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        156 ----------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS  199 (260)
T ss_pred             ----------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence                      56789999999999999999999999999999999999999854

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.1e-35  Score=267.79  Aligned_cols=188  Identities=13%  Similarity=0.176  Sum_probs=161.9

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+. .+..+++.++.  ....+++||++|+++++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence            45789999999998  599999999999999999999998543 33344554443  23567899999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|++++++|+.+++++++.++|.|+   +||++||..+..+.+     
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~-----  157 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE-----  157 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc-----
Confidence            9999999999999998542    4566789999999999999999999999999996   699999876654433     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.
T Consensus       158 -----------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        158 -----------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             -----------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence                       567899999999999999999999999999999999999998654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=268.44  Aligned_cols=186  Identities=24%  Similarity=0.317  Sum_probs=164.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+.  +.++.++++|++|+++++++++++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999988642  2333333322  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|.      +||++||..+..+.+         
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------  151 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI---------  151 (251)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC---------
Confidence            99999999999997777777889999999999999999999999999873      699999998776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ..+.|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       152 -------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~  196 (251)
T PRK12481        152 -------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAA  196 (251)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhh
Confidence                   556899999999999999999999999999999999999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-35  Score=268.74  Aligned_cols=185  Identities=16%  Similarity=0.196  Sum_probs=160.1

Q ss_pred             CCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ ++.++..+++....  .....++||++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6799999999986  99999999999999999999987 45556666665542  3467789999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCC-----CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIK-----EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++|++|+||||||+....+     +.+.+.++|++++++|+.+++.+++.+.|.++   +||++||..+..+.+      
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~------  154 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------  154 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC------
Confidence            9999999999999854322     44568899999999999999999999998764   699999887655443      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                .+.+|++||+|+++|+++++.|++++||+||+|+||+++|++.+
T Consensus       155 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        155 ----------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  198 (262)
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence                      56789999999999999999999999999999999999998754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.9e-35  Score=266.67  Aligned_cols=187  Identities=16%  Similarity=0.107  Sum_probs=160.8

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+ ++.++..+++.+..  +....++||++|+++++++++++.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVV-DKLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-HHHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHH
Confidence            478999999997  6799999999999999999998886 45555566665443  234578999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCC----C-CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCC
Q psy2854         131 KQYPKIHVLINNAGVSVPI----K-EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~  201 (384)
                      +++|++|+||||||+....    + +.+.+.++|++++++|+.+++++++.++|.|+    +||++||..+..+.+    
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~----  155 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP----  155 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC----
Confidence            9999999999999986432    2 34567889999999999999999999999885    699999987765544    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                  ++..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.
T Consensus       156 ------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        156 ------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             ------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence                        667899999999999999999999999999999999999998654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3e-35  Score=272.20  Aligned_cols=190  Identities=15%  Similarity=0.140  Sum_probs=161.8

Q ss_pred             CCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH-------hcCC----cEEEEEeec--
Q psy2854          52 KPMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-------VQDG----QIVLMELNL--  116 (384)
Q Consensus        52 ~~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-------~~~~----~~~~~~~Dv--  116 (384)
                      .+++||+++||||  ++|||+++|++|+++|++|++ +|+.+++++...++.+.       ...+    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 78888887777666431       0111    146788999  


Q ss_pred             CC------------------HHHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHH
Q psy2854         117 AS------------------FDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNL  176 (384)
Q Consensus       117 s~------------------~~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  176 (384)
                      ++                  +++++++++++.+++|++|+||||||+..  ..++.+.+.++|++++++|+.+++.+++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            43                  44899999999999999999999998643  35778889999999999999999999999


Q ss_pred             HHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcc
Q psy2854         177 LIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWC  251 (384)
Q Consensus       177 ~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v  251 (384)
                      ++|.|+   +||++||..+..+.+                .. ..|++||+|+++|+++|+.|+++ +|||||+|+||++
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p----------------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v  227 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIP----------------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL  227 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCC----------------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc
Confidence            999996   699999988765543                33 47999999999999999999986 7999999999999


Q ss_pred             cCCcccc
Q psy2854         252 YTNLFRH  258 (384)
Q Consensus       252 ~T~~~~~  258 (384)
                      +|+|.+.
T Consensus       228 ~T~~~~~  234 (303)
T PLN02730        228 GSRAAKA  234 (303)
T ss_pred             cCchhhc
Confidence            9999764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-35  Score=267.76  Aligned_cols=187  Identities=15%  Similarity=0.121  Sum_probs=161.5

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..+++|+++||||+  +|||+++|++|+++|++|++++|+ ++..+..+++.++.  +....+++|++|+++++++++++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~-~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQG-DALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-hHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHH
Confidence            34789999999997  899999999999999999999886 33444555555443  23567899999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|++++++|+.+++.+++.++|.|+   +||++||..+..+.+     
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p-----  157 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP-----  157 (272)
T ss_pred             HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC-----
Confidence            9999999999999998542    4566789999999999999999999999999986   699999876654443     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                 .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       158 -----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        158 -----------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             -----------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence                       66789999999999999999999999999999999999999764

>KOG0725|consensus

Probab=100.00  E-value=6.4e-35  Score=265.41  Aligned_cols=188  Identities=26%  Similarity=0.295  Sum_probs=166.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++.||+++||||++|||+++|++|++.|++|++++|+.+++++..+++..... +.++..+.||+++.+++++++++..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999888888766432 4578999999999999999999999


Q ss_pred             Hh-CCCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhH-HHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQ-YPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVG-HFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~-~g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~-~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++ +|++|+||||||..... +..+.++++|++++++|+.| .+.+.+.+.++++     .|+++||..+..+.+     
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~-----  158 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP-----  158 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC-----
Confidence            99 79999999999997665 68889999999999999995 6666777777765     477788777665543     


Q ss_pred             CcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         203 NGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       203 ~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                                 +. .+|++||+|+++|+|+++.|++++|||||+|+||.+.|++
T Consensus       159 -----------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  159 -----------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             -----------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence                       22 6899999999999999999999999999999999999998

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=266.67  Aligned_cols=189  Identities=22%  Similarity=0.303  Sum_probs=170.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.....+.++.+++||++|+++++++++++.++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998888887777765333567889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.++|++++++|+.+++.++++++|.|+     +||++||..+..+.+          
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  153 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----------  153 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC----------
Confidence            99999999999986666666778999999999999999999999999884     699999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+|+++++++++.|++++||+||+|+||+++|++.+
T Consensus       154 ------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~  197 (260)
T PRK07063        154 ------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTE  197 (260)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhh
Confidence                  66789999999999999999999999999999999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.8e-34  Score=269.49  Aligned_cols=186  Identities=23%  Similarity=0.287  Sum_probs=158.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ..|++++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++..+.+|+++  ++.+.++++.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            36899999999999999999999999999999999999998888888766544678889999985  2333444444444


Q ss_pred             C--CccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc-C-CcCcCCC
Q psy2854         134 P--KIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR-G-TIDFDNL  202 (384)
Q Consensus       134 g--~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~-~-~~~~~~~  202 (384)
                      +  ++|+||||||+...  .++.+.+.+++++++++|+.|++.+++.++|.|.     +||++||.++.. + .+     
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p-----  203 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDP-----  203 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCc-----
Confidence            4  46799999998643  3567789999999999999999999999999884     699999987753 2 22     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                 ..+.|++||+++++|+++|+.|++++||+|++|+||+|+|+|.+
T Consensus       204 -----------~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        204 -----------LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence                       56789999999999999999999999999999999999999976

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=266.29  Aligned_cols=189  Identities=22%  Similarity=0.268  Sum_probs=172.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..++.++..+++|++|+++++++++++.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999888888887776654567889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|+     +||++||..+..+.+          
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  154 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------  154 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------
Confidence            99999999999997667778889999999999999999999999999985     699999988766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            ....|+++|+|+.+++++++.|++++||+|++|+||+++|++.+
T Consensus       155 ------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        155 ------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWR  198 (265)
T ss_pred             ------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhh
Confidence                  56789999999999999999999999999999999999999854

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=268.96  Aligned_cols=186  Identities=21%  Similarity=0.305  Sum_probs=166.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM---------IRGQEALEKLKKEVQDGQIVLMELNLASFDSIK  123 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~  123 (384)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.         +++++..+++.+.  +.++.++.+|++|+++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            36799999999999999999999999999999998876         5566666666543  457888999999999999


Q ss_pred             HHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCccc
Q psy2854         124 NFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLM  192 (384)
Q Consensus       124 ~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~  192 (384)
                      ++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.           +||++||.++
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999999997767778889999999999999999999999998873           6999999888


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ..+.+                ++..|++||+|+++|+++++.|++++||+||+|+|| ++|++..
T Consensus       161 ~~~~~----------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        161 LQGSV----------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             CcCCC----------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch
Confidence            76655                677899999999999999999999999999999999 8999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-34  Score=264.90  Aligned_cols=187  Identities=15%  Similarity=0.131  Sum_probs=158.1

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|. ++.++..+++.++.+  ....++||++|+++++++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc-hHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHH
Confidence            467999999996  6899999999999999999998765 333444455544432  23468999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCC----C-CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVSVPI----K-EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      +++|++|+||||||+....    + ..+.+.++|++.+++|+.++++++++++|+|+   +||++||..+..+.+     
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~-----  154 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP-----  154 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC-----
Confidence            9999999999999985432    2 34568899999999999999999999999995   699999987755443     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 .+.+|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.
T Consensus       155 -----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~  199 (260)
T PRK06997        155 -----------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG  199 (260)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc
Confidence                       566899999999999999999999999999999999999987643

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-35  Score=264.52  Aligned_cols=191  Identities=19%  Similarity=0.276  Sum_probs=168.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++..+++|++|+++++++++++.+.
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877777776543  357888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.      +||++||..+......        
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  155 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP--------  155 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC--------
Confidence            99999999999987777777889999999999999999999999999873      4888888765432210        


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            .....|++||+|+++++++++.|++++||+||+|+||+++|++.+..
T Consensus       156 ------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~  202 (253)
T PRK05867        156 ------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY  202 (253)
T ss_pred             ------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc
Confidence                  03468999999999999999999999999999999999999997654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=261.88  Aligned_cols=190  Identities=25%  Similarity=0.303  Sum_probs=168.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++.||++|+++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999999988887777776553  45788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc-CCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR-GTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~-~~~~~~~~~~  204 (384)
                      +++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.++     +||++||..+.. +.+       
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~-------  152 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFP-------  152 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCC-------
Confidence            9999999999999853 35667778999999999999999999999999884     599999987652 332       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|++||+|+++++++++.|+.++||+|++|+||+++|++.+..
T Consensus       153 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        153 ---------GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence                     6678999999999999999999999999999999999999987643

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-34  Score=265.55  Aligned_cols=187  Identities=24%  Similarity=0.379  Sum_probs=167.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++..++||++++++++++++++.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999 7777777777543  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+... .+..+.+.+.|++++++|+.+++.+++.++|.++    +||++||..+..+.+          
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------  149 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------
Confidence            9999999999998643 4666778999999999999999999999999984    699999988766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            ....|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       150 ------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        150 ------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDK  194 (272)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhh
Confidence                  556899999999999999999999999999999999999998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=268.72  Aligned_cols=191  Identities=18%  Similarity=0.240  Sum_probs=160.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc----------hhHHHHHHHHHHHhcCCcEEEEEeecCCHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM----------IRGQEALEKLKKEVQDGQIVLMELNLASFDS  121 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~  121 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.          ++.++..+++...  +.++.+++||++|+++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence            568899999999999999999999999999999999984          3444444555332  4567889999999999


Q ss_pred             HHHHHHHHHHhCCCccEEEECC-CCCC----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcc
Q psy2854         122 IKNFAKNVMKQYPKIHVLINNA-GVSV----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSL  191 (384)
Q Consensus       122 v~~~~~~i~~~~g~id~lvnnA-G~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~  191 (384)
                      ++++++++.+++|++|+||||| |...    ..++.+.+.++|++++++|+.+++.++++++|+|.     +||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 8531    24566778899999999999999999999999984     699999965


Q ss_pred             cccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         192 MDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +......             ......|++||+|+.+|+++|+.|++++||+||+|+||+++|+|..
T Consensus       162 ~~~~~~~-------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        162 AEYNATH-------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             ccccCcC-------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            5322110             0145679999999999999999999999999999999999999853

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=269.75  Aligned_cols=189  Identities=26%  Similarity=0.277  Sum_probs=171.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++.  +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999998888887777653  46788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .+|++|++|||||+....++.+.+.+++++++++|+.|++++++.++|+|+     +||+++|..+..+.+         
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p---------  151 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP---------  151 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC---------
Confidence            999999999999998778888889999999999999999999999999885     589999988776654         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCC-CcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADK-GVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~-gI~v~~v~PG~v~T~~~~~  258 (384)
                             ....|++||+|+.+|+++|+.|+.+. ||+|++|+||.++|++.+.
T Consensus       152 -------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        152 -------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence                   66789999999999999999999874 9999999999999998653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-34  Score=261.49  Aligned_cols=187  Identities=16%  Similarity=0.133  Sum_probs=156.6

Q ss_pred             CCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .++++|+++||||  ++|||+++|++|+++|++|++++|+..  ++..+++.+.. +.++.++++|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            3478999999999  899999999999999999999998641  12223333332 235778999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|++++++|+.+++.+++.++|+|+   +||+++|.. ..+.+     
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~-----  153 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWP-----  153 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCC-----
Confidence            9999999999999998543    3456678899999999999999999999999996   688887643 22222     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.
T Consensus       154 -----------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  198 (256)
T PRK07889        154 -----------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA  198 (256)
T ss_pred             -----------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc
Confidence                       556799999999999999999999999999999999999998654

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-34  Score=262.81  Aligned_cols=188  Identities=23%  Similarity=0.275  Sum_probs=170.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777776543  456888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|.|.      +||++||..+..+.+         
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~---------  151 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA---------  151 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC---------
Confidence            99999999999997777888889999999999999999999999999873      499999988776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++.+|+++|+.|++++||+|++|+||.++|++..+
T Consensus       152 -------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        152 -------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence                   667899999999999999999999999999999999999998654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=257.27  Aligned_cols=191  Identities=20%  Similarity=0.245  Sum_probs=167.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+ ..++..+++...  +.++..+++|++|+++++++++++.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999764 345555555443  4578889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +.++++|++|||||+....+..+.+.++|++++++|+.+++.++++++|.|.     +||++||..+..+.+..      
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  155 (254)
T PRK06114         82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL------  155 (254)
T ss_pred             HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC------
Confidence            9999999999999997767777889999999999999999999999999874     69999998876554310      


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              ..+.|++||+|+++++++++.|+.++||+||+|+||+++|++.+.
T Consensus       156 --------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~  200 (254)
T PRK06114        156 --------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR  200 (254)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc
Confidence                    356899999999999999999999999999999999999998753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.3e-34  Score=239.39  Aligned_cols=180  Identities=28%  Similarity=0.355  Sum_probs=162.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.|.+++||||++|||+++|++|.+.|-+|++++|++++++++.++      ...++...||+.|.+++++++++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHhh
Confidence            56899999999999999999999999999999999998777776554      356788999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCC--CCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEK--LTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++.+++||||||+.....+.  +...++.++.+++|+.++++++++++|++.     .||+|||..+..+..        
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~--------  147 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA--------  147 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc--------
Confidence            99999999999997655443  335677888999999999999999999986     499999999887765        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                              ..+.||++|+|+..++.+|+..++..+|.|.-+.|..|+|+
T Consensus       148 --------~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         148 --------STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --------ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                    66789999999999999999999999999999999999997

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-34  Score=259.40  Aligned_cols=191  Identities=16%  Similarity=0.161  Sum_probs=165.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.++.++..+++.... +.++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999998865 4555565556654432 4578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC------CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSV------PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~  199 (384)
                      ++++++|+||||||+..      ..++.+.+.+++++.+++|+.+++.+++.++|.|+     +||++||..+..+.+  
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  160 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE--  160 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC--
Confidence            99999999999999742      24556678899999999999999999999999985     699999987655443  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                    .+..|++||+|+++++++|+.|++++||+|++|+||+++|++.+..
T Consensus       161 --------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~  206 (260)
T PRK08416        161 --------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF  206 (260)
T ss_pred             --------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc
Confidence                          5668999999999999999999999999999999999999986543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=283.09  Aligned_cols=183  Identities=25%  Similarity=0.351  Sum_probs=163.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999977766555443     3567889999999999999999999999


Q ss_pred             CCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         134 PKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       134 g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      |++|+||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+|+      +||++||..+..+.+        
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~--------  149 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP--------  149 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC--------
Confidence            99999999999843  24566779999999999999999999999999982      699999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              ....|++||+|+++|+++++.|+.++||+|++|+||+++|++..
T Consensus       150 --------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~  193 (520)
T PRK06484        150 --------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVA  193 (520)
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhh
Confidence                    66789999999999999999999999999999999999999864

>KOG4169|consensus

Probab=100.00  E-value=3.8e-35  Score=248.05  Aligned_cols=183  Identities=25%  Similarity=0.353  Sum_probs=165.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||.|++||+.||||++++++|+++|.++.++..+.+. .+...++++..+..++.+++|||++..+++++++++.+.
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998888777666 556677888888899999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCc--------EEEEcCcccccCCcCcCCCCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQK--------VVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~--------iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +|.+|++|||||+.        ++.+|++++++|+.|.++-+...+|+|.+        |||+||..+..+.+       
T Consensus        81 fg~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p-------  145 (261)
T KOG4169|consen   81 FGTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP-------  145 (261)
T ss_pred             hCceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc-------
Confidence            99999999999995        56779999999999999999999999972        89999999988776       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCccccCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLK--YADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                               ..+.|++||+++.+|+|+++..  |.+.||++++||||+++|++.++.+
T Consensus       146 ---------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~  194 (261)
T KOG4169|consen  146 ---------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENID  194 (261)
T ss_pred             ---------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHH
Confidence                     6789999999999999999876  4567999999999999999987663

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=251.36  Aligned_cols=182  Identities=19%  Similarity=0.155  Sum_probs=161.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..++||++|+++++++++++.++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888887777553  456788999999999999999999999


Q ss_pred             CC-CccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         133 YP-KIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       133 ~g-~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +| ++|++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.      +||++||..+.   +       
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~-------  149 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---Q-------  149 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---C-------
Confidence            99 9999999998643 34677788999999999999999999999999874      58899886432   2       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                               ++..|++||+|+.+|+++++.|++++||+||+|+||+++|+.
T Consensus       150 ---------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        150 ---------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                     456799999999999999999999999999999999999994

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=262.47  Aligned_cols=189  Identities=24%  Similarity=0.322  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++..   +.++..++||++|+++++++++++.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999998777666655531   34677788999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++|++|++|||||+....++.+.+.++|++++++|+.|++++++.++|.|.    +||++||..+..+.+          
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  151 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP----------  151 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----------
Confidence            999999999999997777888889999999999999999999999999874    599999988776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +...|++||+++++|+++++.|++++||+|++++||+++|++.+..
T Consensus       152 ------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        152 ------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence                  6778999999999999999999999999999999999999997654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.7e-33  Score=253.47  Aligned_cols=188  Identities=21%  Similarity=0.323  Sum_probs=164.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++++.  .++..+++.+.  +.++..+++|++|.++++++++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999887753  23444444432  45688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|++|||||+....+..+.+.++|++++++|+.+++.++++++|.|.      +||++||..+..+.+        
T Consensus        82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  153 (253)
T PRK08993         82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI--------  153 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC--------
Confidence            999999999999987666777889999999999999999999999999873      599999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              ....|++||+|+++++++++.|+.++||+|++|+||+++|++.+..
T Consensus       154 --------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~  199 (253)
T PRK08993        154 --------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL  199 (253)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh
Confidence                    5568999999999999999999999999999999999999987543

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-33  Score=258.65  Aligned_cols=204  Identities=40%  Similarity=0.616  Sum_probs=170.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++.++.++++|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888777777655445678899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc-CCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR-GTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~-~~~~~~~~~~  204 (384)
                      ++++++|+||||||+..+.  ...+.++++.++++|+.|++.+++.++|.++     +||++||..+.. +..++.+...
T Consensus        91 ~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  168 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQW  168 (306)
T ss_pred             hhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCc
Confidence            9999999999999985432  3457788999999999999999999999875     799999987654 2222222222


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEE--ecCcccCCccccCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVV--CPGWCYTNLFRHAD  260 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v--~PG~v~T~~~~~~~  260 (384)
                      ..++    ++...|++||++++.+++++++++++.|++++++  +||+|+|++.++.+
T Consensus       169 ~~~~----~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~  222 (306)
T PRK06197        169 ERRY----NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP  222 (306)
T ss_pred             ccCC----CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc
Confidence            2222    2667899999999999999999998888777665  69999999987664

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=253.43  Aligned_cols=187  Identities=22%  Similarity=0.335  Sum_probs=162.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++|+++||||++|||+++|++|+++|++|++.+ |+.++.++..+++...  +.++..+++|+++.++++.+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 5556666666666543  456778999999999999999888763


Q ss_pred             ----CC--CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         133 ----YP--KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ----~g--~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                          ++  ++|+||||||+....+..+.+.++|++++++|+.+++.++++++|.|+   +||++||..+..+.+      
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------  153 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP------  153 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC------
Confidence                34  899999999986556677788999999999999999999999999986   799999998776554      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                +...|++||+|+++++++++.|++++||+||+|+||+|+|++.++
T Consensus       154 ----------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        154 ----------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh
Confidence                      567899999999999999999999999999999999999998654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-33  Score=253.55  Aligned_cols=189  Identities=22%  Similarity=0.312  Sum_probs=169.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++..+.+|++|+++++++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988887777777543  35678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.+.+.     +||++||..+..+.+         
T Consensus        83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  153 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD---------  153 (254)
T ss_pred             hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC---------
Confidence            999999999999987666777889999999999999999999999999873     699999987665543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +.+.|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       154 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        154 -------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhh
Confidence                   566899999999999999999999999999999999999998754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=253.62  Aligned_cols=188  Identities=24%  Similarity=0.337  Sum_probs=166.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+ ++.++..+.+.+.  +.++.+++||+++.++++++++++.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998 5555554444332  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .+|++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.     +||++||..+..+.+         
T Consensus        88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  158 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK---------  158 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC---------
Confidence            999999999999987667777778999999999999999999999999874     699999988766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ..+.|++||+|++++++++++|+.++||+||+|+||+++|++.+.
T Consensus       159 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        159 -------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence                   567899999999999999999999999999999999999998653

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-33  Score=253.71  Aligned_cols=184  Identities=18%  Similarity=0.268  Sum_probs=163.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.+++||++|+++++++++++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999976665554443     356888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++++|++|||||....... +.+.++|++.+++|+.+++.+++.++|.|+    +||++||..+..+.+           
T Consensus        78 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------  145 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------  145 (261)
T ss_pred             hCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------
Confidence            9999999999998544333 458899999999999999999999999983    799999988776654           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       146 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        146 -----GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh
Confidence                 567899999999999999999999999999999999999998653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=250.57  Aligned_cols=191  Identities=21%  Similarity=0.260  Sum_probs=169.2

Q ss_pred             CCCCCEEEEeCCCC-chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANS-GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~-GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++|+++||||+| |||++++++|+++|++|++++|+.++.++..+++++..+..++..+++|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999985 99999999999999999999999888877777776644445788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .+|++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|.      +|++++|..+..+.+        
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------  165 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH--------  165 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------
Confidence            999999999999987667778889999999999999999999999999874      588888877655443        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++++++++.|++++||+|++|+||+++|++.+..
T Consensus       166 --------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~  211 (262)
T PRK07831        166 --------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV  211 (262)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc
Confidence                    6678999999999999999999999999999999999999987543

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3e-32  Score=254.33  Aligned_cols=188  Identities=24%  Similarity=0.314  Sum_probs=163.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++++.+  ..++..+.+...  +.++.+++||++|.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            477899999999999999999999999999999887643  233344444332  4578889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +.++++|+||||||... ..++.+.+.++|++++++|+.|++++++.++|.|+   +||++||..+..+.+         
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  200 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP---------  200 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC---------
Confidence            99999999999999853 34577789999999999999999999999999885   799999988766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|+.++||+||+|+||+++|++...
T Consensus       201 -------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~  245 (300)
T PRK06128        201 -------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS  245 (300)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc
Confidence                   667899999999999999999999999999999999999998643

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.4e-33  Score=251.98  Aligned_cols=184  Identities=16%  Similarity=0.156  Sum_probs=162.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||+++|++|+ +|++|++++|+.+++++..+++++. +..++.+++||++|+++++++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR-GATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 5999999999998888888877654 22357889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||+....+..+.+.+.+++++++|+.+++.+++.++|.|.      +||++||.++..+.+             
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-------------  145 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR-------------  145 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-------------
Confidence            9999999986555555667778889999999999999999988873      599999998876554             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         +...|++||+|+++|+++++.|+.++||+|++|+||+++|++...
T Consensus       146 ---~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~  190 (246)
T PRK05599        146 ---ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG  190 (246)
T ss_pred             ---CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC
Confidence               667899999999999999999999999999999999999998654

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=248.12  Aligned_cols=190  Identities=24%  Similarity=0.392  Sum_probs=169.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|.++++++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777666543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .+|++|++|||||.... .++.+.+.+++++++++|+.+++.++++++|.+.     ++|++||..+..+.+        
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------  152 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP--------  152 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC--------
Confidence            99999999999998543 3466778999999999999999999999999873     699999988776654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++++++++.|+.++||+|++|+||.++|++.+..
T Consensus       153 --------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        153 --------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence                    6778999999999999999999999999999999999999997654

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=6e-33  Score=253.49  Aligned_cols=177  Identities=21%  Similarity=0.292  Sum_probs=159.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+.             ..++.+++||++|+++++++++++.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998532             12577899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|+|+     +||++||..+..+.+         
T Consensus        69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  139 (258)
T PRK06398         69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR---------  139 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC---------
Confidence            999999999999997767788889999999999999999999999999983     699999987765544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++++++++.|+.+. |+||+|+||+++|++.+.
T Consensus       140 -------~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        140 -------NAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             -------CCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence                   66789999999999999999999875 999999999999998643

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-32  Score=248.60  Aligned_cols=187  Identities=25%  Similarity=0.304  Sum_probs=161.7

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCc-----------hhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSM-----------IRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.           ++..+..+++.+.  +.++.++++|++|.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5789999999999  5999999999999999999986431           2222333333322  46788999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR  194 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~  194 (384)
                      ++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|+     +||++||..+..
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            999999999999999999999999987667778889999999999999999999999999985     699999987765


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +.+                ++..|++||+++++|+++++.|+.++||+|++|+||+++|++..
T Consensus       161 ~~~----------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~  207 (256)
T PRK12859        161 PMV----------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT  207 (256)
T ss_pred             CCC----------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC
Confidence            443                67799999999999999999999999999999999999999753

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.2e-32  Score=255.11  Aligned_cols=196  Identities=35%  Similarity=0.511  Sum_probs=164.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.      ++.++++|++|.++++++++++.+.
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999877766655542      3678999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||+... + .+.+.++|+.++++|+.|++.+++.++|.++     +||++||..+..+...+.+.....+
T Consensus        97 ~~~iD~li~nAg~~~~-~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         97 GRRIDILINNAGVMAC-P-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCCCEEEECCCCCCC-C-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            9999999999998543 2 3457788999999999999999999999874     6999999866544333322221112


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      +    ++...|++||++++.+++.++.++.++||+|++|+||++.|++.+...
T Consensus       175 ~----~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~  223 (315)
T PRK06196        175 Y----DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLP  223 (315)
T ss_pred             C----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCC
Confidence            2    256789999999999999999999999999999999999999976543

>KOG1610|consensus

Probab=100.00  E-value=2.5e-32  Score=243.01  Aligned_cols=186  Identities=28%  Similarity=0.366  Sum_probs=166.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+..+|.|+|||+.+|.|+.+|++|.++|++|++.|-+++..++...+.    ..++...++.|||++++++++.+.+++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~----~s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET----KSPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh----cCCcceeEeeccCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999997765544444333    257888999999999999999999988


Q ss_pred             hCC--CccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYP--KIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g--~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ..+  .+..||||||+. ..++.+..+.+++++++++|++|++.+++.++|.++    |||++||..+..+.+       
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p-------  173 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP-------  173 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc-------
Confidence            654  599999999975 456788889999999999999999999999999997    799999999987766       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               ...+|++||+|++.|+.++++|+.+.||+|..|.||..+|++..
T Consensus       174 ---------~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  174 ---------ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ---------ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                     67789999999999999999999999999999999999999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=250.57  Aligned_cols=181  Identities=24%  Similarity=0.229  Sum_probs=160.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   +++.++++|++|+++++++++++.++++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999988887777777542   3678899999999999999999999999999


Q ss_pred             EEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         138 VLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       138 ~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +||||||...  +.++.+.+.++|.+.+++|+.+++.+++.++|.+.      +||++||..+..+.+            
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~------------  146 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP------------  146 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC------------
Confidence            9999999853  23466778899999999999999999999988763      599999987765544            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          +...|++||+|+.+++++++.|++++||+|++|+||+++|++.+
T Consensus       147 ----~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        147 ----PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHH
Confidence                66789999999999999999999999999999999999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-33  Score=257.51  Aligned_cols=190  Identities=18%  Similarity=0.174  Sum_probs=148.1

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH--------HHhcCC-----cEEEEEeec
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK--------KEVQDG-----QIVLMELNL  116 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~--------~~~~~~-----~~~~~~~Dv  116 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++.++.+ ++....+...        ....+.     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            36789999999996  9999999999999999999977542 1111100000        000000     111122333


Q ss_pred             CCH------------------HHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHH
Q psy2854         117 ASF------------------DSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNL  176 (384)
Q Consensus       117 s~~------------------~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  176 (384)
                      ++.                  ++++++++++.+++|++|+||||||...  ..++.+.+.++|++++++|+.|+++++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            333                  4689999999999999999999999753  45777889999999999999999999999


Q ss_pred             HHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcc
Q psy2854         177 LIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWC  251 (384)
Q Consensus       177 ~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v  251 (384)
                      ++|.|+   +|++++|..+..+.+                .. ..|++||+|+++|+++|+.|+++ +|||||+|+||++
T Consensus       163 ~~p~m~~~G~ii~iss~~~~~~~p----------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v  226 (299)
T PRK06300        163 FGPIMNPGGSTISLTYLASMRAVP----------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL  226 (299)
T ss_pred             HHHHhhcCCeEEEEeehhhcCcCC----------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc
Confidence            999996   699999987765544                33 37999999999999999999987 5999999999999


Q ss_pred             cCCcccc
Q psy2854         252 YTNLFRH  258 (384)
Q Consensus       252 ~T~~~~~  258 (384)
                      +|++.+.
T Consensus       227 ~T~~~~~  233 (299)
T PRK06300        227 ASRAGKA  233 (299)
T ss_pred             cChhhhc
Confidence            9998753

>KOG1014|consensus

Probab=100.00  E-value=2.1e-32  Score=243.53  Aligned_cols=186  Identities=24%  Similarity=0.303  Sum_probs=165.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-  133 (384)
                      .|++++||||+.|||++.|++||++|.+|++++|+++|+++..+|+.+.++ .++.++.+|.++.+.+-   +++.+.. 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~y---e~i~~~l~  123 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVY---EKLLEKLA  123 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhH---HHHHHHhc
Confidence            359999999999999999999999999999999999999999999998875 78999999999888633   3333332 


Q ss_pred             -CCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         134 -PKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       134 -g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                       .++.+||||+|...  |..+.+.+.+.+++.+++|..+...+++.++|.|.     -||++||.++..+.+        
T Consensus       124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p--------  195 (312)
T KOG1014|consen  124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTP--------  195 (312)
T ss_pred             CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccCh--------
Confidence             36788999999976  55667777779999999999999999999999996     399999999988887        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                              .++.|++||+.+..|+++|+.|++.+||.|.++.|+.|.|+|.....
T Consensus       196 --------~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  196 --------LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence                    88999999999999999999999999999999999999999987654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=250.12  Aligned_cols=188  Identities=21%  Similarity=0.301  Sum_probs=169.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++.+|+.+++++..+++...  +.++.+++||++|+++++++++++.+.
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999988877776666543  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||+....+..+.+.+++++++++|+.+++.+++.++|.|+     +||++||..+..+.+          
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  154 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE----------  154 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC----------
Confidence            99999999999997777777889999999999999999999999999884     699999987765543          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++++++++++.|+.++||+|++|+||.++|++...
T Consensus       155 ------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        155 ------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence                  667899999999999999999999999999999999999998654

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-32  Score=253.48  Aligned_cols=187  Identities=21%  Similarity=0.267  Sum_probs=161.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+.+  ..++..+.+.+.  +.++.++++|++|.++++++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999887532  333333333221  4568889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +.+|++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+   +||++||..+..+.+         
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~---------  194 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP---------  194 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC---------
Confidence            99999999999999743 34567778999999999999999999999999875   699999988776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             ...+|++||+|+++++++++.|++++||+||+|+||+++|++..
T Consensus       195 -------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~  238 (294)
T PRK07985        195 -------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI  238 (294)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccc
Confidence                   56789999999999999999999999999999999999999853

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.1e-32  Score=248.64  Aligned_cols=191  Identities=23%  Similarity=0.309  Sum_probs=172.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++....++.++.++++|++++++++++++++.+.
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998888877777766554568899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++.+++|+.+++.++++++|.|+     ++|++||..+..+.+          
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------  155 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR----------  155 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC----------
Confidence            99999999999986666677779999999999999999999999999874     699999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +.+.|++||++++.++++++.|++++||+|++|+||+++|++.+..
T Consensus       156 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~  201 (257)
T PRK09242        156 ------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP  201 (257)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc
Confidence                  5678999999999999999999999999999999999999997643

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=8.4e-32  Score=245.51  Aligned_cols=189  Identities=22%  Similarity=0.341  Sum_probs=168.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777776666543  45788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||...+.+. +.+.+++++.+++|+.++++++++++|.|.     ++|++||..+..+.+         
T Consensus        85 ~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  154 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI---------  154 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---------
Confidence            99999999999998655544 568899999999999999999999999885     799999988765544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||+|+++++++++.|+.+.||+||+|+||+++|++.+..
T Consensus       155 -------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~  200 (255)
T PRK06113        155 -------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc
Confidence                   6678999999999999999999999999999999999999987653

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=256.88  Aligned_cols=188  Identities=25%  Similarity=0.295  Sum_probs=170.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888777777643  46788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|++|||||.....++.+.+.+++++++++|+.|++++++.++|+|+     +||++||..+..+.+         
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~---------  152 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP---------  152 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC---------
Confidence            999999999999987777788889999999999999999999999999985     499999998876654         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD--KGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~--~gI~v~~v~PG~v~T~~~~  257 (384)
                             ....|++||+++++|+++++.|+..  .+|+|++|+||.++|++.+
T Consensus       153 -------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        153 -------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence                   6678999999999999999999974  4799999999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=244.66  Aligned_cols=188  Identities=26%  Similarity=0.349  Sum_probs=164.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+. +..++..+++...  +.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999988854 3444455555433  4578889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++++++|++|||||...+.+..+.+.++|++++++|+.+++.+++.++|.|.      +||++||..+..+.+       
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~-------  153 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP-------  153 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC-------
Confidence            9999999999999987777777789999999999999999999999998873      689999976655443       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               +..+|++||+|+++++++++.|+.++||+|++|+||+++|++.+
T Consensus       154 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        154 ---------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence                     66789999999999999999999999999999999999999865

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-32  Score=245.78  Aligned_cols=189  Identities=20%  Similarity=0.231  Sum_probs=167.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.+..++++|+++.++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999988777777766543  35678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .++++|++|||||... ..+..+.+.+++++++++|+.+++.++++++|+++     +++++||..+..+.+        
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  153 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD--------  153 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC--------
Confidence            9999999999999743 34566778999999999999999999999999974     599999987765543        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +.+.|++||+++++++++++.|+.++||+|++|+||.++|++.+.
T Consensus       154 --------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~  198 (252)
T PRK07035        154 --------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA  198 (252)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc
Confidence                    667899999999999999999999999999999999999998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-32  Score=249.76  Aligned_cols=185  Identities=31%  Similarity=0.321  Sum_probs=166.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++      .++.+++||++|+++++++++++.+.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------ccceEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987766554443      14778899999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||+....++.+.+.+++++++++|+.|++.+++.++|.|.     +||++||..+..+.+          
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  145 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP----------  145 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC----------
Confidence            99999999999997777778889999999999999999999999999885     599999998776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +...|++||+++.+|+++++.|+.+.||++++|+||+++|++....
T Consensus       146 ------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        146 ------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence                  6778999999999999999999999999999999999999986543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.3e-32  Score=248.43  Aligned_cols=184  Identities=24%  Similarity=0.227  Sum_probs=156.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..    +.. +.++..+++|++|.++++++++++.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE----AAH-GDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hhc-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999876554432    221 356888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCCh----hhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTK----EGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~----~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++++|+||||||+... .++.+.+.    ++|++++++|+.+++.++++++|.|.    ++|+++|..+..+.+      
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  150 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG------  150 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC------
Confidence            9999999999997432 23333333    57999999999999999999999884    599999987765443      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                +...|++||+|+++|+++++.|++++ |+||+|+||+++|+|...
T Consensus       151 ----------~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~  194 (262)
T TIGR03325       151 ----------GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGP  194 (262)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccc
Confidence                      56689999999999999999999886 999999999999998653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=6e-32  Score=249.64  Aligned_cols=188  Identities=24%  Similarity=0.385  Sum_probs=166.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987777776666543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC---------------CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcc
Q psy2854         132 QYPKIHVLINNAGVSVPI---------------KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSL  191 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~---------------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~  191 (384)
                      +++++|++|||||...+.               ++.+.+.++|++.+++|+.+++.+++.++|.|.     +||++||..
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~  163 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN  163 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence            999999999999975432               345678899999999999999999999999874     599999998


Q ss_pred             cccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         192 MDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +..+.+                +...|++||+|+++++++++.|++++||+||+|+||+++|++.+
T Consensus       164 ~~~~~~----------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~  213 (278)
T PRK08277        164 AFTPLT----------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNR  213 (278)
T ss_pred             hcCCCC----------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchh
Confidence            876554                66789999999999999999999999999999999999999754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=6.2e-32  Score=246.49  Aligned_cols=185  Identities=23%  Similarity=0.317  Sum_probs=166.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++...++.+.  +.++.++++|++|+++++++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988777777666543  457888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|++|||||+....+..+.+.+++++++++|+.+++.+++.+++.++      +||++||..+..+.+            
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  147 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP------------  147 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC------------
Confidence            99999999987666777788999999999999999999999998763      689999988766554            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          +...|++||++++.+++.++.|+.++||+|++|+||+++|++...
T Consensus       148 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        148 ----ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence                566899999999999999999999999999999999999998653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-32  Score=247.90  Aligned_cols=183  Identities=20%  Similarity=0.236  Sum_probs=158.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++|+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999976655544332     346788999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhh----HHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEG----YEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~----~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++++|+||||||+... .++.+.+.++    |++++++|+.+++.+++.++|.|+    +||+++|..+..+.+      
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  151 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG------  151 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC------
Confidence            9999999999998542 3444555554    899999999999999999999885    599999988765543      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                +...|++||+|+++++++++.|+++ +|+||+|+||+++|++..
T Consensus       152 ----------~~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        152 ----------GGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcC
Confidence                      5668999999999999999999987 499999999999999864

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.2e-32  Score=249.82  Aligned_cols=187  Identities=21%  Similarity=0.270  Sum_probs=163.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++++.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998766555554442   135688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||....  .++.+.+.+++++++++|+.|+++++++++|.|.     +|++++|..+..+.+       
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------  163 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-------  163 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-------
Confidence            99999999999998543  3466778999999999999999999999999873     689999988765543       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               +...|++||+|+++++++++.|++++||+|++++||.++|++..
T Consensus       164 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        164 ---------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence                     45689999999999999999999999999999999999999854

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-31  Score=251.21  Aligned_cols=186  Identities=21%  Similarity=0.318  Sum_probs=163.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++||+++||||++|||+++|++|+++|++|++.+++. +..++..++++..  +.++.++++|++|.++++++++++.
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999998753 4555666666543  5678899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------------cEEEEcCcccccCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------------KVVIVGSSLMDRGTID  198 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------------~iv~vsS~~~~~~~~~  198 (384)
                      + +|++|+||||||+.....+.+.+.++|++++++|+.+++++++++.|+|+            +||++||..+..+.+ 
T Consensus        86 ~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  163 (306)
T PRK07792         86 G-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV-  163 (306)
T ss_pred             H-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC-
Confidence            8 99999999999997777777789999999999999999999999988763            689999987765544 


Q ss_pred             cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         199 FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                     +.+.|++||+|+++|+++++.|+.++||+||+|+|| ..|+|..
T Consensus       164 ---------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~  206 (306)
T PRK07792        164 ---------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTA  206 (306)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhh
Confidence                           667899999999999999999999999999999999 4888754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.8e-32  Score=247.82  Aligned_cols=211  Identities=26%  Similarity=0.364  Sum_probs=176.8

Q ss_pred             CCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCccEE
Q psy2854          63 GAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVL  139 (384)
Q Consensus        63 Gas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g~id~l  139 (384)
                      |++  +|||+++|++|+++|++|++++|+.++.++..+++.++.+ .+  +++||++++++++++++++.+.+ |++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  9999999999999999999999999988888888887754 33  59999999999999999999999 999999


Q ss_pred             EECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         140 INNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       140 vnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      |||+|....    .++.+.+.++|++.+++|+.+++.+++++.|.|+   +||++||..+..+.+               
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~---------------  142 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP---------------  142 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST---------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc---------------
Confidence            999998665    5677788999999999999999999999999886   799999998776654               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCccccCc--hHHHHHHH-------------HHHHHHHH
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM-------------IFPIAMMV  276 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~-------------~~~~~~~~  276 (384)
                       ++..|+++|+|+++++++++.|+++ +|||||+|+||+++|++.+...  +++.+...             +.....||
T Consensus       143 -~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL  221 (241)
T PF13561_consen  143 -GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFL  221 (241)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHH
T ss_pred             -cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHH
Confidence             6679999999999999999999999 9999999999999999865432  22222211             11133556


Q ss_pred             Hhhccccccccccccc
Q psy2854         277 VIVGSSLMDRGTIDFD  292 (384)
Q Consensus       277 ~~s~s~~~~~~~i~f~  292 (384)
                      +...+.++++..+..|
T Consensus       222 ~s~~a~~itG~~i~vD  237 (241)
T PF13561_consen  222 ASDAASYITGQVIPVD  237 (241)
T ss_dssp             HSGGGTTGTSEEEEES
T ss_pred             hCccccCccCCeEEEC
Confidence            6666677777766554

...

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=249.48  Aligned_cols=189  Identities=21%  Similarity=0.236  Sum_probs=163.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988877777766543  45688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCC--ChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLT--TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+|++|++|||||+....+..+.  +.++++.++++|+.|++.+++.++|.|+     +||++||.++..+..       
T Consensus       114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  186 (293)
T PRK05866        114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS-------  186 (293)
T ss_pred             HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-------
Confidence            99999999999998766555442  4578899999999999999999999874     699999865432211       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              ++...|++||+|+++|+++++.|++++||+|++|+||.++|++.+
T Consensus       187 --------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~  231 (293)
T PRK05866        187 --------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA  231 (293)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence                    155689999999999999999999999999999999999999864

>KOG1207|consensus

Probab=100.00  E-value=2.6e-33  Score=226.78  Aligned_cols=183  Identities=24%  Similarity=0.310  Sum_probs=160.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.|+++++||+..|||+++++.|++.|++|+.+.|+++.+....++.     ...+..++.|+++.+.+.+++.    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----   73 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----   73 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----
Confidence            4688999999999999999999999999999999999987766665543     3458889999999776665543    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHH----HHHhcC--cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL----LIERIQ--KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~----~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ..+++|.||||||+....++.+.+.+.+++.|++|+.++++..|.    ++++..  .||++||.++.++..        
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~--------  145 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLD--------  145 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccC--------
Confidence            447899999999999999999999999999999999999999998    444444  699999999877654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              ....||++|+|+.+++++++.|+.+++||||+|+|-.|-|+|.+..
T Consensus       146 --------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dn  191 (245)
T KOG1207|consen  146 --------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDN  191 (245)
T ss_pred             --------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccc
Confidence                    6779999999999999999999999999999999999999998753

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.3e-32  Score=271.01  Aligned_cols=185  Identities=21%  Similarity=0.288  Sum_probs=165.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ...||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.+...+++|++|+++++++++++.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999977666554433     346778999999999999999999999


Q ss_pred             CCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|.   +||++||.++..+.+           
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  409 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP-----------  409 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC-----------
Confidence            999999999999853 34667779999999999999999999999999985   699999998876654           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+++++|+++++.|+.++||+||+|+||+|+|++.+.
T Consensus       410 -----~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        410 -----PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh
Confidence                 667899999999999999999999999999999999999998654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.4e-32  Score=245.51  Aligned_cols=185  Identities=23%  Similarity=0.327  Sum_probs=159.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++++.+..   .+++..    .++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE----KGVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh----CCCeEEEecCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999887764322   233322    2477899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||+....++.+.+.++|++++++|+.+++.+++.++|.|+     +||++||..+.....         
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~---------  146 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA---------  146 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC---------
Confidence            999999999999986666777789999999999999999999999999885     699999987653221         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            .+.+.|++||+|+++++++++.|+.+.||+|++|+||+++|++...
T Consensus       147 ------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        147 ------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             ------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence                  1556899999999999999999999999999999999999998643

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=244.63  Aligned_cols=189  Identities=20%  Similarity=0.291  Sum_probs=169.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++.+|++++.++..+++...  +.++..+++|++|+++++++++++.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777766666543  35688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.+.|.     +||++||..+..+.+         
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  154 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP---------  154 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC---------
Confidence            999999999999997777788889999999999999999999999999873     699999987655443         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|+++|+++++++++++.|++++||+|++|+||+++|++.+.
T Consensus       155 -------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  199 (255)
T PRK07523        155 -------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAA  199 (255)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhh
Confidence                   667899999999999999999999999999999999999998653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.2e-31  Score=243.28  Aligned_cols=186  Identities=26%  Similarity=0.405  Sum_probs=162.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+..  .+..+.+.+.  +.++.++++|++++++++++++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999752  3333333332  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....+..+.+.++|++++++|+.+++.+++.++|.|.      ++|++||..+..+.+         
T Consensus        78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  148 (248)
T TIGR01832        78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI---------  148 (248)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC---------
Confidence            99999999999997766777778999999999999999999999998763      689999987765543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ..+.|++||+++++++++++.|+.++||+|++|+||+++|++.+.
T Consensus       149 -------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       149 -------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA  193 (248)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence                   556899999999999999999999999999999999999998654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.4e-31  Score=240.11  Aligned_cols=190  Identities=26%  Similarity=0.327  Sum_probs=164.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |++|+++||||++|||+++|++|+++|++|++. +++..+.++..+++...  +.++..+.+|++|.++++++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999998875 44555555555555432  456888899999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.++|++++++|+.+++.+++.++|.+.     ++|++||..+..+.+          
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  148 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF----------  148 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC----------
Confidence            99999999999987666777789999999999999999999999999874     699999987665544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                            +...|+++|+++++++++++.|+.+.||++++|+||+++|++.+...+
T Consensus       149 ------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~  196 (246)
T PRK12938        149 ------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP  196 (246)
T ss_pred             ------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh
Confidence                  667899999999999999999999999999999999999998765443

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=242.93  Aligned_cols=181  Identities=20%  Similarity=0.264  Sum_probs=159.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999987777766666543  357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|++|||||.....+..+.+.++|++++++|+.++++++++++|+|.      +||++||..+..+.+            
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------  146 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP------------  146 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC------------
Confidence            99999999976556777889999999999999999999999998753      599999987655433            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCYTN  254 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~T~  254 (384)
                          ....|++||+|+++|+++|+.|+.+ +||+|++|+||+++|+
T Consensus       147 ----~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        147 ----GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence                5568999999999999999999974 6999999999999964

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=5.7e-31  Score=240.21  Aligned_cols=186  Identities=19%  Similarity=0.243  Sum_probs=163.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +|+++||||++|||++++++|+++|++|+++++ +.+..++..+++...  +.+++++++|++|+++++++++++.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            679999999999999999999999999988865 445555555555443  46788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++|++|||||.....+..+.+.+++++++++|+.+++.+++++.+.|.      ++|++||..+..+.+           
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-----------  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-----------  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-----------
Confidence            999999999987666677779999999999999999999999999873      699999987665544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|+++|+++++++++++.++.++||+|++|+||.++|++.+..
T Consensus       149 -----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~  194 (256)
T PRK12743        149 -----GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD  194 (256)
T ss_pred             -----CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc
Confidence                 6678999999999999999999999999999999999999987643

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=246.22  Aligned_cols=191  Identities=20%  Similarity=0.270  Sum_probs=162.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-------GQEALEKLKKEVQDGQIVLMELNLASFDSIKN  124 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~  124 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++++|+++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence            35788999999999999999999999999999999998653       23333444332  4578899999999999999


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCc
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~  199 (384)
                      +++++.+.++++|++|||||.....+..+.+.+++++++++|+.+++.++++++|.|+     +|+++||..+..+..  
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--  157 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW--  157 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc--
Confidence            9999999999999999999987777777889999999999999999999999999884     588888876543320  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPG-WCYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~  258 (384)
                                  .++++.|++||+++++++++++.|+.++||+|++|+|| .++|++.++
T Consensus       158 ------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~  205 (273)
T PRK08278        158 ------------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN  205 (273)
T ss_pred             ------------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh
Confidence                        01667899999999999999999999999999999999 689986553

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=248.02  Aligned_cols=181  Identities=24%  Similarity=0.259  Sum_probs=160.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-  133 (384)
                      .+|+++||||+||||+++|++|+++|++|++++|+.+++++    +.+    ..+.++.+|++|.++++++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~----l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA----LEA----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHH----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999999765443    222    247788999999999999999997766 


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      |++|++|||||+....++.+.+.++++.++++|+.|++.+++.++|.|+     +||++||..+..+.+           
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMK-----------  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCC-----------
Confidence            6899999999998878888889999999999999999999999999885     699999987765543           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +.+.|++||+++++++++++.|++++||+|++|+||+++|++.++.
T Consensus       144 -----~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~  189 (277)
T PRK05993        144 -----YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANA  189 (277)
T ss_pred             -----ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHH
Confidence                 5678999999999999999999999999999999999999987643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=243.49  Aligned_cols=184  Identities=24%  Similarity=0.292  Sum_probs=158.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+. ..++..+++...  +.++.++++|++|.++++++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999984 334444444332  45688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+     +||++||..+.. .         
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~---------  150 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-I---------  150 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-C---------
Confidence            9999999999999643 45677789999999999999999999999999884     699999976531 1         


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                              ....|++||+|+++|+++++.|++++||+|++|+||.++|++.
T Consensus       151 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (260)
T PRK12823        151 --------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPR  193 (260)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcch
Confidence                    3347999999999999999999999999999999999999863

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.2e-31  Score=244.67  Aligned_cols=185  Identities=23%  Similarity=0.251  Sum_probs=159.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          58 VCIITGANSGIGYETAKELAK----LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++||||++|||+++|++|++    .|++|++++|+.+++++..++++...++.++.++++|++|+++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998888888877654334578899999999999999999998887


Q ss_pred             CCc----cEEEECCCCCCCC--CCCC-CChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCc
Q psy2854         134 PKI----HVLINNAGVSVPI--KEKL-TTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       134 g~i----d~lvnnAG~~~~~--~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~  199 (384)
                      |.+    |+||||||.....  ...+ .+.++|++++++|+.|++.+++.++|.|+       +||++||..+..+.+  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~--  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK--  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC--
Confidence            653    6999999974332  2222 25789999999999999999999999874       599999987765544  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                    ++..|++||+|+++|+++++.|++++||+|++|+||+++|+|.+.
T Consensus       160 --------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       160 --------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH
Confidence                          677899999999999999999999999999999999999998653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-31  Score=240.24  Aligned_cols=189  Identities=18%  Similarity=0.291  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++++.  +.++.++.||++|++++.++++++.+
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777776666543  45688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|.     ++|++||..+..+.+         
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---------  155 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA---------  155 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC---------
Confidence            999999999999987767777889999999999999999999999999874     699999988766554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.|+.++||+|++|+||.++|++.+.
T Consensus       156 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        156 -------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA  200 (256)
T ss_pred             -------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh
Confidence                   667899999999999999999999999999999999999998543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=7.9e-31  Score=246.08  Aligned_cols=203  Identities=33%  Similarity=0.573  Sum_probs=162.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.++..+++..  .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999 9999999998877766666532  24567889999999999999999999889


Q ss_pred             CCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCc--------
Q psy2854         134 PKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTI--------  197 (384)
Q Consensus       134 g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~--------  197 (384)
                      +++|+||||||+..+. +..+.+.++|++++++|+.|++.+++.++|.|+       +||++||..+.....        
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            9999999999985432 234568899999999999999999999999873       799999998753210        


Q ss_pred             CcCCCCcC-cCc--------ccCCCChhhhhhcHHHHHHHHHHHHHHhC-CCCcEEEEEecCcc-cCCccccC
Q psy2854         198 DFDNLNGE-KGF--------VQKGHSNPAYCNSKLMNYYFGAELYLKYA-DKGVDVSVVCPGWC-YTNLFRHA  259 (384)
Q Consensus       198 ~~~~~~~~-~~~--------~~~~~~~~~Y~aSK~a~~~~~~~la~e~~-~~gI~v~~v~PG~v-~T~~~~~~  259 (384)
                      ++.++... .++        .....++.+|++||+|+..+++++++++. ++||+|++|+||.| +|+|.++.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence            11111100 000        01123667899999999999999999985 46999999999999 69997653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.98  E-value=3.2e-31  Score=241.93  Aligned_cols=185  Identities=24%  Similarity=0.371  Sum_probs=164.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     ..++.++++|++|+++++++++++.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999977666554433     346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....++.+.+.+++++++++|+.+++.+++++++.+.      +||++||..+..+.+         
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  148 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA---------  148 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC---------
Confidence            99999999999987667777788999999999999999999999999872      599999987665544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.|+.++||+|++|+||+++|++.+.
T Consensus       149 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        149 -------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             -------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence                   667899999999999999999999999999999999999998654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.98  E-value=2.4e-31  Score=270.23  Aligned_cols=190  Identities=26%  Similarity=0.348  Sum_probs=172.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..+++++++||||+||||+++|++|+++|++|++++|+.+++++..+++++.  +.++.+++||++|+++++++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999988887777776543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.+++++++++|+.|++++++.++|.|.      +||++||.++..+.+        
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------  460 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR--------  460 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC--------
Confidence            999999999999998777888889999999999999999999999999973      699999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++++++++.|++++||+|++|+||+|+|+|.+..
T Consensus       461 --------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        461 --------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             --------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence                    6678999999999999999999999999999999999999987653

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.9e-31  Score=243.74  Aligned_cols=190  Identities=22%  Similarity=0.268  Sum_probs=152.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++|||| +|||+++|++|+ +|++|++++|+.+++++..+++...  +.++.+++||++|+++++++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            579999998 699999999996 8999999999988777776666542  457889999999999999999998 56899


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCc-------CcCCCCcC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTI-------DFDNLNGE  205 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~-------~~~~~~~~  205 (384)
                      +|+||||||+..       +.++|++++++|+.|++++++.+.|.|+   ++|+++|.++..+..       ....++..
T Consensus        77 id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         77 VTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             CCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccc
Confidence            999999999742       3467999999999999999999999985   688999987764320       00000000


Q ss_pred             c----CcccC---CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 K----GFVQK---GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~----~~~~~---~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .    .+...   .+++..|++||+|+.+++++++.|++++||+||+|+||+++|++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~  208 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ  208 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence            0    00000   0145789999999999999999999999999999999999999864

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.9e-31  Score=242.28  Aligned_cols=183  Identities=25%  Similarity=0.258  Sum_probs=160.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++..   ..++.++++|++|+++++++++++.+++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK---AARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc---CCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999998776655554432   127889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCC-CCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEK-LTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|++|||||........ +.+.++++.++++|+.|++.+++.++|.|+     +||++||..+..+.+            
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~------------  146 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP------------  146 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC------------
Confidence            99999999986543333 267899999999999999999999999884     699999988876654            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          ....|++||++++.++++++.|++++||+|++|+||+++|++.+
T Consensus       147 ----~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  190 (257)
T PRK07024        147 ----GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA  190 (257)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh
Confidence                56689999999999999999999999999999999999999754

>PRK06182 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.7e-31  Score=243.70  Aligned_cols=180  Identities=27%  Similarity=0.286  Sum_probs=159.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||+||||++++++|+++|++|++++|+.+++++.    ..    ..+.++++|++|+++++++++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS----LGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh----CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999997654432    21    247789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|++|||||+....++.+.+.++++.++++|+.+++.+++.++|.|+     +||++||..+..+.+           
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------  141 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP-----------  141 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC-----------
Confidence            9999999999997777888889999999999999999999999999984     699999987655443           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           ....|++||+++++++++++.|+++.||+|++|+||+++|++.+
T Consensus       142 -----~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  185 (273)
T PRK06182        142 -----LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD  185 (273)
T ss_pred             -----CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccch
Confidence                 45679999999999999999999999999999999999999854

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.6e-31  Score=241.18  Aligned_cols=184  Identities=23%  Similarity=0.214  Sum_probs=162.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|++++++++++    
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----
Confidence            4789999999999999999999999999999999999888777777765543 35688899999999999888764    


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|.     +||++||..+..+.+          
T Consensus        79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------  148 (259)
T PRK06125         79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA----------  148 (259)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC----------
Confidence            57999999999987667788889999999999999999999999999985     599999887655433          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            .+..|++||+|+++++++++.|+.++||+||+|+||+++|++..
T Consensus       149 ------~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  192 (259)
T PRK06125        149 ------DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML  192 (259)
T ss_pred             ------CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH
Confidence                  56789999999999999999999999999999999999999743

>KOG1611|consensus

Probab=99.98  E-value=4.2e-31  Score=223.71  Aligned_cols=189  Identities=27%  Similarity=0.370  Sum_probs=155.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEE-EEecCchhHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKL-KATVV-LGCRSMIRGQEALEKLKKE-VQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi-~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..|.++||||++|||..++++|.+. |.+++ .++|++++.   .+++... ....+++.+++|+++.++++++++++.+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence            3467999999999999999999975 66654 566767765   2333222 1257999999999999999999999998


Q ss_pred             h--CCCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----------------cEEEEcCccc
Q psy2854         132 Q--YPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----------------KVVIVGSSLM  192 (384)
Q Consensus       132 ~--~g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----------------~iv~vsS~~~  192 (384)
                      -  ...+|+||||||+...- ...+.+.+.|-+++++|..|++.++|+++|+++                .|||+||.++
T Consensus        79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            7  45899999999996543 334456788999999999999999999999986                3888999887


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                      ..+...             ..++.+|.+||+|+++|+|+++.|+++.+|-|..+|||||+|+|....
T Consensus       159 s~~~~~-------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  159 SIGGFR-------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             ccCCCC-------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence            633210             117789999999999999999999999999999999999999998743

>PRK06194 hypothetical protein; Provisional

Probab=99.98  E-value=6.8e-31  Score=243.71  Aligned_cols=189  Identities=22%  Similarity=0.275  Sum_probs=167.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777776666543  457888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCCcCcCC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~~~~~~  201 (384)
                      +|++|+||||||.....+..+.+.++|+.++++|+.|++.++++++|.|.           ++|++||..+..+.+    
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  156 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP----  156 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence            99999999999997777777789999999999999999999999999863           589999988776544    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccccC
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                  +.+.|++||+++++++++++.|+.  ..+|++++++||+++|++.+..
T Consensus       157 ------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~  204 (287)
T PRK06194        157 ------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE  204 (287)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence                        567899999999999999999987  4579999999999999987543

>KOG1209|consensus

Probab=99.98  E-value=6.3e-32  Score=225.70  Aligned_cols=180  Identities=24%  Similarity=0.223  Sum_probs=162.0

Q ss_pred             CCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH-hC
Q psy2854          56 GKVCIITGAN-SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK-QY  133 (384)
Q Consensus        56 ~k~vlITGas-~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~-~~  133 (384)
                      .|.|+|||++ ||||.++|++|++.|+.|+.++|+.+...+...+       ..+...++|+++++++.++..++++ .+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            5788898886 7999999999999999999999997766554432       3478899999999999999999998 78


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      |.+|+|+||||..-..|..+.+.++.+++|++|++|+++++|++...+.    .||+++|..+..+.+            
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp------------  147 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP------------  147 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc------------
Confidence            9999999999998778889999999999999999999999999985554    699999999887766            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          ..++|++||+|+.++++.|+.|+++.||+|..+.||.|+|++...
T Consensus       148 ----f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  148 ----FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ----hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                678999999999999999999999999999999999999999765

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=236.91  Aligned_cols=189  Identities=29%  Similarity=0.449  Sum_probs=167.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  ..++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988877776666443  35688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-------------CcEEEEcCcccccCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-------------QKVVIVGSSLMDRGTID  198 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-------------~~iv~vsS~~~~~~~~~  198 (384)
                      .++++|++|||||.....++.+.+.++++.++++|+.+++.++++++|.+             .++|++||..+..+.+ 
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-  161 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP-  161 (258)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC-
Confidence            99999999999998766667777889999999999999999999999876             2688999887655433 


Q ss_pred             cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         199 FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                     ....|+++|++++.++++++.++.++||+|++|+||+++|++.+.
T Consensus       162 ---------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        162 ---------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH  206 (258)
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence                           567899999999999999999999999999999999999998754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=7.6e-31  Score=238.52  Aligned_cols=190  Identities=27%  Similarity=0.417  Sum_probs=165.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHHHhcC-CcEEEEEeecCC-HHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR--GQEALEKLKKEVQD-GQIVLMELNLAS-FDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~Dvs~-~~~v~~~~~~  128 (384)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.  .+...+...  ..+ ..+.+..+|+++ .++++.++++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999888887664  233333322  112 367888899998 9999999999


Q ss_pred             HHHhCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcC
Q psy2854         129 VMKQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +.+.+|++|++|||||+... .++.+.+.++|++++++|+.|++.+++.+.|.++  +||++||..+. +.+        
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~--------  150 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGP--------  150 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCC--------
Confidence            99999999999999999766 4788889999999999999999999998899999  99999999887 544        


Q ss_pred             cCcccCCCC-hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         206 KGFVQKGHS-NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       206 ~~~~~~~~~-~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                              + ..+|++||+|+.+|+++++.|+.++||+|++|+||+++|++.+....
T Consensus       151 --------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~  199 (251)
T COG1028         151 --------PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALES  199 (251)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhh
Confidence                    4 47899999999999999999999999999999999999999876543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.9e-31  Score=239.06  Aligned_cols=179  Identities=23%  Similarity=0.261  Sum_probs=159.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++      +    ..+.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T----VDGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h----hcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998643      0    1145688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .++++|++|||||+....+..+.+.++|++++++|+.+++.+++.+.|.|.      +||++||..+..+.+        
T Consensus        72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------  143 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP--------  143 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC--------
Confidence            999999999999987666677788999999999999999999999998763      699999988766554        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+++++|+++++.|+.++ |+|++|+||.++|++..
T Consensus       144 --------~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~  186 (252)
T PRK07856        144 --------GTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSE  186 (252)
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHh
Confidence                    66789999999999999999999887 99999999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.2e-31  Score=241.05  Aligned_cols=185  Identities=23%  Similarity=0.292  Sum_probs=167.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+||||++++++|+++|++|++++|+.+++++..++++..  +.++.+++||++|+++++++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999988888877777654  4578889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      |+||||||.....++.+.+.+++++++++|+.+++.+++.++|.++     +||++||..+..+.+              
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--------------  144 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP--------------  144 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC--------------
Confidence            9999999997777788889999999999999999999999999874     699999988766544              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                        +.+.|++||+++++++++++.|+.+.||++++|+||+++|++.+..
T Consensus       145 --~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        145 --AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             --CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence              6778999999999999999999999999999999999999987654

>PRK05717 oxidoreductase; Validated

Probab=99.98  E-value=8.8e-31  Score=238.79  Aligned_cols=184  Identities=21%  Similarity=0.279  Sum_probs=160.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|+++.++++++++++.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876555443322     35688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++++.|.|.    +||++||..+..+.+        
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~--------  152 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP--------  152 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC--------
Confidence            99999999999998643  4566678999999999999999999999999873    699999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              ....|++||+++++++++++.++.+ +|+|++++||.++|++..
T Consensus       153 --------~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~  195 (255)
T PRK05717        153 --------DTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS  195 (255)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence                    5568999999999999999999976 599999999999999754

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.4e-31  Score=238.88  Aligned_cols=186  Identities=21%  Similarity=0.281  Sum_probs=156.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI----RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++++..    ..++..+++...  +.++.++++|++|++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            467899999999999999999999999999777765433    333333444332  35788899999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEE-cCcccccCCcCcCCCCc
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIV-GSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~v-sS~~~~~~~~~~~~~~~  204 (384)
                      +.+.++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.|+|+   +++++ ||..+. ..+       
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-~~~-------  154 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-FTP-------  154 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-cCC-------
Confidence            999999999999999987767777788999999999999999999999999985   57766 444332 222       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               .+..|++||+|+++|+++++.|+.++||+|++++||+++|++..
T Consensus       155 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        155 ---------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             ---------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence                     55689999999999999999999999999999999999999753

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.8e-31  Score=238.06  Aligned_cols=185  Identities=23%  Similarity=0.336  Sum_probs=163.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++++|++|.+++.++++++.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999866555444333     356888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|.|.   ++|+++|..+..+.+            
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------  145 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------  145 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------
Confidence            99999999999987666677779999999999999999999999999874   688888877665544            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          ....|++||+++++++++++.|++++||++++++||.++|++.+.
T Consensus       146 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        146 ----NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence                567899999999999999999999999999999999999998653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=236.41  Aligned_cols=189  Identities=21%  Similarity=0.237  Sum_probs=168.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++....++.+++++++|++|+++++++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999998888877777766555568899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||+....+..+.+.+.+++++++|+.+++.+++.++|.++     ++|++||..+..+.+.            
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG------------  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC------------
Confidence            99999999997776777778899999999999999999999998864     6999999877665431            


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                         ....|++||+++++++++++.++.+.||+|++|+||+++|++.+..
T Consensus       150 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        150 ---VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc
Confidence               3568999999999999999999998999999999999999987543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-30  Score=235.94  Aligned_cols=185  Identities=26%  Similarity=0.337  Sum_probs=162.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+. .+..+++    .+.++..+++|++++++++++++++.+.
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998653 2222222    2356778999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++++++|+.+++++++.+.|.|.     ++|++||..+..+.+          
T Consensus        87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  156 (255)
T PRK06841         87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------  156 (255)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------
Confidence            99999999999987666777778999999999999999999999999863     699999987766554          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            ....|++||+++++++++++.|++++||+|++|+||+++|++.+.
T Consensus       157 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        157 ------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK  201 (255)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence                  567899999999999999999999999999999999999998654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-31  Score=238.57  Aligned_cols=186  Identities=21%  Similarity=0.180  Sum_probs=157.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.++ +++..+++.+. +..+++++++|++|+++++++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHh-
Confidence            57899999999999999999999995 899999999876 77777777653 234788999999999999999999886 


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||+|..........+.++.++++++|+.+++.+++.++|.|.     +||++||..+..+.+          
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~----------  154 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRR----------  154 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCC----------
Confidence            58999999999985432222224555667899999999999999999986     699999987654433          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++.+|+++++.|+.++||+|++|+||+++|++...
T Consensus       155 ------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~  199 (253)
T PRK07904        155 ------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH  199 (253)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc
Confidence                  556799999999999999999999999999999999999998654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=238.56  Aligned_cols=187  Identities=24%  Similarity=0.313  Sum_probs=162.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++...  +.++.++++|++++++++++++++.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999864 33444444332  457888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc-cCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD-RGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~-~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....+..+.+.+++++.+++|+.+++.+++.++|.+.     ++|++||..+. .+.+         
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  150 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP---------  150 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC---------
Confidence            99999999999987767777888999999999999999999999999873     69999987653 2222         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ++..|++||+++++++++++.|+.++||+|++|+||.++|++.+.
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        151 -------GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES  195 (263)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHh
Confidence                   566899999999999999999999999999999999999998653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=238.56  Aligned_cols=186  Identities=23%  Similarity=0.314  Sum_probs=163.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++. +..+++.+.  +.++.++++|++++++++++++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999988765 555555443  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      .++++|++|||||........+ +.++|++.+++|+.+++.+++.+.|.++    +++++||..+..+.+          
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------  148 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVGLEA-GREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG----------  148 (258)
T ss_pred             hcCCCCEEEECCcccCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC----------
Confidence            9999999999999855445544 4499999999999999999999999875    599999988765543          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|+.++||+|++|+||.++|++.+
T Consensus       149 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~  192 (258)
T PRK08628        149 ------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE  192 (258)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH
Confidence                  66789999999999999999999999999999999999999754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.2e-30  Score=234.55  Aligned_cols=184  Identities=16%  Similarity=0.266  Sum_probs=154.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++|+++||||++|||+++|++|+++|++|++++++ .++.++    +.... +.++.++++|++|+++++++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEA----LADEL-GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHH----HHHHh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999887654 333332    22222 35788899999999999999999999


Q ss_pred             hCCC-ccEEEECCCCCC------CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCc
Q psy2854         132 QYPK-IHVLINNAGVSV------PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       132 ~~g~-id~lvnnAG~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~  199 (384)
                      .+++ +|++|||||...      ..++.+.+.+++++++++|+.+++.+++.++|.|.     +||++||..+..+..  
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--  154 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVV--  154 (253)
T ss_pred             HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC--
Confidence            9887 999999999732      23456678899999999999999999999999874     699999875543322  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                    +...|++||+|++++++++++|+.++||+||+|+||+++|+...
T Consensus       155 --------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        155 --------------PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             --------------CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence                          45689999999999999999999999999999999999998654

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=233.23  Aligned_cols=190  Identities=20%  Similarity=0.238  Sum_probs=163.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS--FDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i  129 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. .+....++++|+++  .+++.++.+++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc-CCCCcceEEeeecccchHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777766543 23456788999986  56899999999


Q ss_pred             HHhC-CCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQY-PKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~-g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+.+ +++|++|||||.... .++.+.+.+++++++++|+.|++.+++.++|.+.     ++++++|..+..+.+     
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----  155 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA-----  155 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC-----
Confidence            9888 899999999997533 4667788999999999999999999999999874     699999977655443     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCC-CcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADK-GVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~-gI~v~~v~PG~v~T~~~~~  258 (384)
                                 ....|++||++++.++++++.|+.+. +|+|++|+||+++|++...
T Consensus       156 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        156 -----------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK  201 (239)
T ss_pred             -----------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc
Confidence                       55689999999999999999999876 6999999999999998653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=238.36  Aligned_cols=186  Identities=17%  Similarity=0.278  Sum_probs=164.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987776666666543  34678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      .++++|++|||||.....++.+.+.++|++++++|+.|++.++++++|.++    +|+++||..+..+.+          
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~----------  152 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP----------  152 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC----------
Confidence            999999999999976666777788999999999999999999999999875    799999987655443          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY-TNL  255 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~-T~~  255 (384)
                            +...|++||+++++|+++++.|+.++||+|++|+||.++ |+.
T Consensus       153 ------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~  195 (264)
T PRK07576        153 ------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG  195 (264)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence                  677899999999999999999999999999999999997 553

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=238.28  Aligned_cols=181  Identities=23%  Similarity=0.286  Sum_probs=158.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+..           ...++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999985421           134678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +++++|++|||||...  ..++.+.+.++|++++++|+.+++.+++.++|+|+     +||++||..+..+.+.      
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------  147 (260)
T PRK06523         74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE------  147 (260)
T ss_pred             HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC------
Confidence            9999999999999743  34566678999999999999999999999999885     5999999876544221      


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||+++++++++++.|+.++||+|++|+||+++|++...
T Consensus       148 ---------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~  192 (260)
T PRK06523        148 ---------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA  192 (260)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH
Confidence                     456899999999999999999999999999999999999998643

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-30  Score=236.98  Aligned_cols=186  Identities=19%  Similarity=0.301  Sum_probs=165.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|+++++++++++.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999987777766666543  4578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|++|||||.... .++.+.+.+++++++++|+.+++.+++++.+.+.    +||++||..+..+.+           
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------  149 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-----------  149 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC-----------
Confidence            999999999998543 5566778999999999999999999999999874    599999987765443           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           +...|+++|++++.++++++.|++++||++++++||.+.|++..
T Consensus       150 -----~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  193 (258)
T PRK07890        150 -----KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK  193 (258)
T ss_pred             -----CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH
Confidence                 66789999999999999999999999999999999999998743

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=232.40  Aligned_cols=187  Identities=22%  Similarity=0.297  Sum_probs=163.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++..+++...  +.++.++++|++|.++++++++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999988877643 334444444432  46789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.+.   ++|++||..+..+.+           
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------  148 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP-----------  148 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC-----------
Confidence            999999999999986666677778999999999999999999999999886   799999887655544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           +...|++||++++.++++++.|+.+.||++++++||+++|++..
T Consensus       149 -----~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~  192 (245)
T PRK12937        149 -----GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF  192 (245)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence                 66789999999999999999999999999999999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-30  Score=239.52  Aligned_cols=182  Identities=23%  Similarity=0.222  Sum_probs=161.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+|+++||||+||||++++++|+++|++|++++|+.++.++.    .+.. +.++..+++|++|++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l----~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF----EALH-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHH----Hhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999987654433    2221 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|++|||||.....+..+.+.+++++++++|+.|++++++.++|+++     ++|++||..+..+.+            
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~------------  145 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP------------  145 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC------------
Confidence            999999999997777778889999999999999999999999999874     699999988776554            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          +...|++||+++++++++++.|+++.|++|++++||.++|++..
T Consensus       146 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        146 ----GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             ----CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence                67789999999999999999999999999999999999999754

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-30  Score=236.97  Aligned_cols=187  Identities=19%  Similarity=0.274  Sum_probs=166.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777766666543  457888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....+..+.+.++++.++++|+.+++.+++++.|+|.      ++|++||..+..+.+         
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  155 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR---------  155 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC---------
Confidence            99999999999986666677789999999999999999999999999873      599999987765543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.|+.+ +|+|++|+||+++|++.+.
T Consensus       156 -------~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~  199 (263)
T PRK07814        156 -------GFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEV  199 (263)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhh
Confidence                   6678999999999999999999977 6999999999999998653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-30  Score=235.83  Aligned_cols=186  Identities=17%  Similarity=0.248  Sum_probs=163.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++....+..++.++.||++|.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998877777666655433356889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|++|||||.....++.+.+.++|++++++|+.+++++++.+.+.|.      ++|++||..+..+.+            
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC------------
Confidence            99999999987777778889999999999999999999999999762      688899877655433            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC-YTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v-~T~~~~  257 (384)
                          ....|++||+|+++++++++.|++++||+|++|+||.+ .|++..
T Consensus       150 ----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        150 ----HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh
Confidence                55689999999999999999999999999999999964 677654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.2e-30  Score=235.35  Aligned_cols=187  Identities=21%  Similarity=0.257  Sum_probs=165.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |.+|+++||||++|||++++++|+++|++|++ .+|+.++.++..++++..  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999876 578877777666666543  467888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||.....+..+.+.++++.++++|+.+++.++++++|.++     +||++||..+..+.+          
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  149 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE----------  149 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC----------
Confidence            99999999999987777788889999999999999999999999999874     699999976654433          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++++++++++.|+.+.||++++|+||+++|++...
T Consensus       150 ------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        150 ------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence                  567899999999999999999999999999999999999998654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=7.8e-30  Score=233.04  Aligned_cols=195  Identities=24%  Similarity=0.345  Sum_probs=167.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.++.+...+++...  +.++.+++||++|+++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987777666665442  45788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .++++|++|||||.....+..+.+.+.|++++++|+.+++.+++++.+. +.     ++|++||..+..+.+..      
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------  159 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------  159 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc------
Confidence            9999999999999866666677789999999999999999999999887 42     69999998766544310      


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                            ..+...|++||+++++++++++.++.++||+++.|+||+++|++.+...
T Consensus       160 ------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~  208 (259)
T PRK08213        160 ------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL  208 (259)
T ss_pred             ------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh
Confidence                  0144689999999999999999999999999999999999999865543

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-30  Score=237.38  Aligned_cols=185  Identities=25%  Similarity=0.279  Sum_probs=163.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.....++++|++|+++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999988777777776544 22335567999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||.....+..+.+.++++..+++|+.+++.+++.++|.|.      +||++||..+..+.+             
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-------------  146 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP-------------  146 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC-------------
Confidence            9999999987667777889999999999999999999999999882      699999987655543             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         ....|++||+++.+++++++.|+.++||+|++|+||.++|++.++
T Consensus       147 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        147 ---WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence               566899999999999999999999999999999999999998754

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-30  Score=238.65  Aligned_cols=179  Identities=26%  Similarity=0.318  Sum_probs=160.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+++||||+||||++++++|+++|++|++++|+.++.+.          ..+++++++|++|+++++++++++.+++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998644321          23578899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|+||||||+....+..+.+.+++++++++|+.|++.+++.++|.|+     +||++||..+..+.+            
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  140 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP------------  140 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC------------
Confidence            999999999997777777889999999999999999999999999874     699999987766544            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                          ....|++||+++++++++++.|++++||++++|+||+++|++..+.
T Consensus       141 ----~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        141 ----YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence                5678999999999999999999999999999999999999987643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.4e-30  Score=234.32  Aligned_cols=187  Identities=22%  Similarity=0.254  Sum_probs=160.2

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCc-----------hhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          53 PMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSM-----------IRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        53 ~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      ++++|+++||||++  |||.++|++|+++|++|++++|++           .......+++...  +.+++++++|++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            46789999999994  999999999999999999999872           1112222333221  45789999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR  194 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~  194 (384)
                      ++++++++++.++++++|++|||||+....+..+.+.+++++.+++|+.+++.+++++.+.|.     ++|++||..+..
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            999999999999999999999999987666777788999999999999999999999998864     699999987655


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +.+                +...|++||+++++++++++.|+.+.||+|++++||.++|++..
T Consensus       160 ~~~----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        160 PMP----------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             CCC----------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            443                56789999999999999999999999999999999999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=230.35  Aligned_cols=190  Identities=22%  Similarity=0.295  Sum_probs=169.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..++++..  +.++.++++|++|+++++++++++.+.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999988877777766543  357889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.|.+.     ++|++||..+..+.+          
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  151 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP----------  151 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC----------
Confidence            99999999999987777777778999999999999999999999999864     699999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                            ....|+++|++++.++++++.++.+.+|++++|+||.++|++.+...
T Consensus       152 ------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~  198 (250)
T PRK12939        152 ------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP  198 (250)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC
Confidence                  55689999999999999999999999999999999999999976544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=233.70  Aligned_cols=187  Identities=28%  Similarity=0.367  Sum_probs=167.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+..++..+++.   .+.++..++||++|+++++++++++.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999877766666554   2467889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+++.++     +++++||..+..+.+          
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------  148 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR----------  148 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC----------
Confidence            99999999999987766777778999999999999999999999998874     599999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +.+.|+++|++++.++++++.|+.++||++++++||.+.|++.++
T Consensus       149 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        149 ------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence                  567899999999999999999999999999999999999998653

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-30  Score=237.13  Aligned_cols=182  Identities=19%  Similarity=0.220  Sum_probs=162.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+|+++||||+||||++++++|+++|++|++++|+.+++++..+.+     +.++.++++|++|+++++++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999976655443322     34678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.++     ++|++||..+..+.+            
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------  144 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP------------  144 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC------------
Confidence            999999999998777888889999999999999999999999998874     699999988776654            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          +...|++||+++++++++++.|+++.||+|++++||.++|++..
T Consensus       145 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        145 ----MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence                56789999999999999999999999999999999999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-30  Score=237.58  Aligned_cols=189  Identities=24%  Similarity=0.314  Sum_probs=164.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+. .++..+.+...  +.++.++.+|++|.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999998643 33333333321  4578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +.++++|++|||||.... .++.+.+.++|++++++|+.+++.+++++++.|+   ++|++||..+..+.+         
T Consensus       120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~---------  190 (290)
T PRK06701        120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE---------  190 (290)
T ss_pred             HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC---------
Confidence            999999999999998543 4566778999999999999999999999999874   799999988776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ....|++||+|+++++++++.++.++||+|++|+||.++|++.+.
T Consensus       191 -------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        191 -------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence                   556899999999999999999999999999999999999998654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.97  E-value=3.1e-30  Score=232.43  Aligned_cols=176  Identities=18%  Similarity=0.224  Sum_probs=151.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||+++|++|+++|++|++++|+.+...   +++..    ..+.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            579999999999999999999999999999999875432   23322    13677899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +|++|||||........+.+.++|++++++|+.+++.+++.++|.|+       +||++||..+..+.+           
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----------  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD-----------  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC-----------
Confidence            99999999986555556668999999999999999999999999874       589998887655443           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                           +...|++||+++++|+++++.|+++ +|+||+|+||++.|+.
T Consensus       144 -----~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~  184 (236)
T PRK06483        144 -----KHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNE  184 (236)
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCC
Confidence                 5678999999999999999999987 5999999999998864

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-30  Score=236.92  Aligned_cols=179  Identities=26%  Similarity=0.225  Sum_probs=158.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+||||++++++|+++|++|++++|+.++.++    +..    ..+.++.+|++|.++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAA----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999998655433    222    246778999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      |++|||||.....+..+.+.+++++++++|+.|++.+++.++|.++    +||++||..+..+.+               
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------  138 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP---------------  138 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC---------------
Confidence            9999999987767777789999999999999999999999999875    589999987765544               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                       ....|++||++++.++++++.|++++||+|++|+||.|+|++.+..
T Consensus       139 -~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~  184 (274)
T PRK05693        139 -FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNA  184 (274)
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccccc
Confidence             5668999999999999999999999999999999999999987654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=236.89  Aligned_cols=180  Identities=24%  Similarity=0.359  Sum_probs=157.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.++..           ..++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999865422           2367789999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCC---------CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCC
Q psy2854         131 KQYPKIHVLINNAGVSVPIK---------EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGT  196 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~---------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~  196 (384)
                      +.++++|++|||||......         ..+.+.++|++++++|+.+++.+++++.++|.     +||++||..+..+.
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS  152 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC
Confidence            99999999999999754322         23568899999999999999999999999885     59999998876654


Q ss_pred             cCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCccc
Q psy2854         197 IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY-TNLFR  257 (384)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~-T~~~~  257 (384)
                      +                +...|++||+++++++++++.|++++||+||+|+||+++ |++..
T Consensus       153 ~----------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~  198 (266)
T PRK06171        153 E----------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRT  198 (266)
T ss_pred             C----------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcC
Confidence            4                667899999999999999999999999999999999997 66643

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.4e-30  Score=231.55  Aligned_cols=185  Identities=23%  Similarity=0.214  Sum_probs=164.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|++++.++++++.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987776666665432  45788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|++|||||.....+..+.+.+++++++++|+.+++.+++.++|.+.     ++|++||..+..+.+            
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  150 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP------------  150 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC------------
Confidence            999999999987666677778999999999999999999999999874     599999987765543            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          +...|++||++++.++++++.|+++.||++++|+||+++|++.+
T Consensus       151 ----~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        151 ----QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence                56789999999999999999999999999999999999999864

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=3.2e-30  Score=241.46  Aligned_cols=198  Identities=35%  Similarity=0.590  Sum_probs=158.5

Q ss_pred             EEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          60 IITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        60 lITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      +||||++|||+++|++|+++| ++|++++|+.++.++..+++..  .+.++.++++|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM--PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            599999999999999999999 9999999998777766666532  1356888999999999999999999988899999


Q ss_pred             EEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCc--------CcCCC
Q psy2854         139 LINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTI--------DFDNL  202 (384)
Q Consensus       139 lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~--------~~~~~  202 (384)
                      ||||||+... .+..+.+.++|++++++|+.|++.+++.++|.|+       +||++||..+..+..        ++.++
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            9999998543 2455678999999999999999999999999872       699999987653210        01111


Q ss_pred             CcC-cCc----------ccCCCChhhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcc-cCCccccC
Q psy2854         203 NGE-KGF----------VQKGHSNPAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWC-YTNLFRHA  259 (384)
Q Consensus       203 ~~~-~~~----------~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v-~T~~~~~~  259 (384)
                      ... .+.          ....+++.+|++||+|+..+++.+++++.+ .||+|++|+||+| +|+|.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~  228 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREH  228 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccc
Confidence            000 000          001126678999999999999999999975 6999999999999 79997653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=8e-30  Score=240.39  Aligned_cols=206  Identities=35%  Similarity=0.579  Sum_probs=164.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++..  .+.++.++++|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998887777766642  2457888999999999999999998888


Q ss_pred             CCCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCC----c---
Q psy2854         133 YPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGT----I---  197 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~----~---  197 (384)
                      ++++|+||||||+.... +..+.+.++++.++++|+.|++.+++.++|.|+       +||++||..+..+.    .   
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            88999999999985432 234568899999999999999999999999873       79999998764321    0   


Q ss_pred             ---CcCCCCc-CcCc--------ccCCCChhhhhhcHHHHHHHHHHHHHHhC-CCCcEEEEEecCcc-cCCccccCc
Q psy2854         198 ---DFDNLNG-EKGF--------VQKGHSNPAYCNSKLMNYYFGAELYLKYA-DKGVDVSVVCPGWC-YTNLFRHAD  260 (384)
Q Consensus       198 ---~~~~~~~-~~~~--------~~~~~~~~~Y~aSK~a~~~~~~~la~e~~-~~gI~v~~v~PG~v-~T~~~~~~~  260 (384)
                         ++.++.. ..++        .....+..+|+.||+++..+++.+++++. ..||+|++++||.| .|++.++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence               1111100 0000        01122567899999999999999999985 46999999999999 599877654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-30  Score=233.70  Aligned_cols=184  Identities=28%  Similarity=0.296  Sum_probs=163.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++++++||||++|||++++++|+++|++|++++|+.++.++...++ .  .+.++.++++|++|+++++++++.+.+ 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~--~~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P--YPGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h--cCCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            467899999999999999999999999999999999987777666655 2  145788999999999999999999876 


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++++++|+.|++.+++.++|++.     ++|++||..+..+.+          
T Consensus        78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  147 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP----------  147 (263)
T ss_pred             cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC----------
Confidence            78999999999987666777789999999999999999999999999874     589999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                            +...|++||+++.+++++++.|+.+.||+|++|+||+++|++.
T Consensus       148 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~  190 (263)
T PRK09072        148 ------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMN  190 (263)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccch
Confidence                  5678999999999999999999999999999999999999874

>TIGR02415 23BDH acetoin reductases

Probab=99.97  E-value=6.8e-30  Score=232.61  Aligned_cols=184  Identities=22%  Similarity=0.312  Sum_probs=164.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+||||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|++++.++++++.++++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999977777666666543  4578899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||.....+..+.+.+++++++++|+.+++.+++.+++.|+      ++|++||..+..+.+             
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  145 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP-------------  145 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-------------
Confidence            9999999987667777889999999999999999999999998763      689999987776654             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         ....|++||+++++++++++.|+.+.||+|++|+||+++|++.+.
T Consensus       146 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~  190 (254)
T TIGR02415       146 ---ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE  190 (254)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh
Confidence               667899999999999999999999999999999999999998654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8e-30  Score=233.10  Aligned_cols=182  Identities=21%  Similarity=0.142  Sum_probs=162.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh-CCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ-YPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-~g~  135 (384)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..+++    .+.++.++++|++|.++++++++.+.++ +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL----GAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999977655554433    2457889999999999999999998877 789


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|+||||||.....++.+.+.+++++++++|+.+++.+++.+.+.|+     +||++||..+..+..             
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------  144 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP-------------  144 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC-------------
Confidence            99999999997777777889999999999999999999999999874     699999988776654             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         ....|++||+++++++++++.|+.++||++++|+||+++|++.+.
T Consensus       145 ---~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        145 ---GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence               567899999999999999999999999999999999999998764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-30  Score=230.01  Aligned_cols=203  Identities=11%  Similarity=0.076  Sum_probs=155.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++||||++|||++++++|+++|++|++++|+.+++++..+++       ++..+++|++|+++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999976665544332       356789999999999999887753   699


Q ss_pred             EEEECCCCCCC--C----CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         138 VLINNAGVSVP--I----KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       138 ~lvnnAG~~~~--~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++|||||....  .    ++.+ +.++|++++++|+.+++++++.++|.|+   +||++||..    .+           
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~-----------  135 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PP-----------  135 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CC-----------
Confidence            99999985321  1    2333 5789999999999999999999999986   699999864    11           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch-HHHHHHHHHHHHHHHHhhcccccccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI-KFYQKVMIFPIAMMVVIVGSSLMDRG  287 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~s~s~~~~~~  287 (384)
                           ....|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.... +.....-+.....+++...++..++.
T Consensus       136 -----~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~~p~~~~~~ia~~~~~l~s~~~~~v~G~  210 (223)
T PRK05884        136 -----AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSRTPPPVAAEIARLALFLTTPAARHITGQ  210 (223)
T ss_pred             -----CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccCCCCCCHHHHHHHHHHHcCchhhccCCc
Confidence                 446899999999999999999999999999999999999997543210 00000112233345555556666655


Q ss_pred             cccc
Q psy2854         288 TIDF  291 (384)
Q Consensus       288 ~i~f  291 (384)
                      .+..
T Consensus       211 ~i~v  214 (223)
T PRK05884        211 TLHV  214 (223)
T ss_pred             EEEe
Confidence            5433

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=229.12  Aligned_cols=188  Identities=22%  Similarity=0.298  Sum_probs=167.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++++++++++++++.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988777776666432  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.|.+.     ++|++||..+..+.+         
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---------  151 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA---------  151 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC---------
Confidence            999999999999987666677778999999999999999999999998763     599999988766644         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+++..++++++.|+.+.||++++|+||.++|++..
T Consensus       152 -------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~  195 (239)
T PRK07666        152 -------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAV  195 (239)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchh
Confidence                   56689999999999999999999999999999999999999754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=1.6e-29  Score=229.21  Aligned_cols=190  Identities=24%  Similarity=0.405  Sum_probs=163.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||.++|++|+++|++|++..+ +.+..++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999987654 445555555555432  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|++|||||........+.+.+++++++++|+.+++.+++.++|.+.     ++|++||..+..+.+         
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  151 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF---------  151 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC---------
Confidence            999999999999997666667778899999999999999999999999873     699999987765543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             ++..|++||+++++++++++.|+.+.||+++.++||.++|++....+
T Consensus       152 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~  198 (247)
T PRK12935        152 -------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP  198 (247)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc
Confidence                   66789999999999999999999999999999999999999865443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.8e-30  Score=235.40  Aligned_cols=188  Identities=28%  Similarity=0.344  Sum_probs=165.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||||+||||++++++|+++|++|++++|+.++.++..+++.....+.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            45789999999999999999999999999999999987777766555443223578899999999999999 99999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|++|||||...+....+.+.+++++++++|+.+++.+++.++|.|+     ++|++||..+..+.+           
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------  148 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP-----------  148 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC-----------
Confidence            9999999999987777777788999999999999999999999999874     689999987766544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+++++++++++.|+.++||++++++||.++|++.+.
T Consensus       149 -----~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        149 -----GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             -----CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence                 667899999999999999999999999999999999999998653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.8e-29  Score=228.05  Aligned_cols=188  Identities=22%  Similarity=0.266  Sum_probs=165.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.++...++..   +.++.+++||++|+++++++++++.++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998777666655543   356889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.+.     ++|++||..+..+.+         
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  149 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP---------  149 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC---------
Confidence            9999999999998443 4466778999999999999999999999999874     599999987766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|+.||++++.++++++.++++.||++++++||+++|++....
T Consensus       150 -------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~  195 (251)
T PRK07231        150 -------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF  195 (251)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh
Confidence                   6678999999999999999999998899999999999999986653

>PRK12742 oxidoreductase; Provisional

Probab=99.97  E-value=2.1e-29  Score=226.95  Aligned_cols=179  Identities=20%  Similarity=0.268  Sum_probs=149.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+ .++.+    ++.+..   ....+.+|++|.+++.++++    
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~----~l~~~~---~~~~~~~D~~~~~~~~~~~~----   71 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAE----RLAQET---GATAVQTDSADRDAVIDVVR----   71 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHH----HHHHHh---CCeEEecCCCCHHHHHHHHH----
Confidence            4779999999999999999999999999999887764 33333    332221   35678899999998877664    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCccccc-CCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDR-GTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~-~~~~~~~~~~~~~  207 (384)
                      +++++|++|||||.....+..+.+.++|++++++|+.+++.+++.+.+.++   ++|++||..+.. +.+          
T Consensus        72 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  141 (237)
T PRK12742         72 KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVA----------  141 (237)
T ss_pred             HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCC----------
Confidence            357899999999986666666778999999999999999999999999875   799999976532 222          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||++++.++++++.|+.++||+|++|+||+++|++...
T Consensus       142 ------~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        142 ------GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA  186 (237)
T ss_pred             ------CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc
Confidence                  567899999999999999999999999999999999999998654

>KOG1199|consensus

Probab=99.97  E-value=1.7e-31  Score=215.99  Aligned_cols=190  Identities=23%  Similarity=0.333  Sum_probs=171.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+|-+++||||.||+|++.|++|+++|+.|++.+--..+.++..+++     ++++.+.+.|++++++++.++...+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh
Confidence            3567889999999999999999999999999999999888888888777     78899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC------CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCccccc
Q psy2854         132 QYPKIHVLINNAGVSVPI------KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDR  194 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~  194 (384)
                      +||++|.+|||||+....      .-...+.|++++.+++|++|+|+.+++....|.           -||+..|.+++.
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            999999999999985432      223468899999999999999999998887775           288999999888


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                      +..                ++++|++||.++.+++--++++++..|||+++|.||..+||+....+++
T Consensus       160 gq~----------------gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek  211 (260)
T KOG1199|consen  160 GQT----------------GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK  211 (260)
T ss_pred             Ccc----------------chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH
Confidence            776                8899999999999999999999999999999999999999999877653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=232.32  Aligned_cols=188  Identities=24%  Similarity=0.354  Sum_probs=167.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++.+.  +.++.++++|++|.++++++++++.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            577999999999999999999999999999999999988887777777543  457888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-C-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-Q-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....+..+.+.++++..+++|+.+++.+++.+++.+ +     ++|++||..+..+.+         
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~---------  152 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP---------  152 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC---------
Confidence            9999999999998766666677889999999999999999999999998 3     699999976655433         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.++.+.||++++++||.++|++.+.
T Consensus       153 -------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        153 -------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence                   556899999999999999999999899999999999999998643

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.97  E-value=1.1e-29  Score=229.09  Aligned_cols=184  Identities=16%  Similarity=0.235  Sum_probs=159.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      ++||||++|||+++|++|+++|++|++++|+. ++.++..+++++.  +.++.++++|++|.++++++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999988754 4455555555443  45789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHH-HhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLI-ERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      ++|||||.....++.+.+.++|+.++++|+.+++++++.++ |.++     ++|++||..+..+.+              
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--------------  144 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR--------------  144 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC--------------
Confidence            99999998766666777899999999999999999999875 4432     699999988776654              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                        +...|++||+++++++++++.|+.++||+|++|+||+++|++.+...
T Consensus       145 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  191 (239)
T TIGR01831       145 --GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE  191 (239)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh
Confidence              66789999999999999999999999999999999999999987543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-29  Score=228.33  Aligned_cols=188  Identities=21%  Similarity=0.237  Sum_probs=162.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++..+.+|++|.++++++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999977666665555433  34678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC---CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSV---PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .++++|+||||||+..   ..++.+.+.+++++++++|+.+++.+++.++|.+.     ++|++||..+..         
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------  150 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---------  150 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---------
Confidence            9999999999999853   23455668899999999999999999999999873     699999976542         


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                +.+.|++||++++.+++++++++.+.||+++.++||.++|++.+...
T Consensus       151 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~  197 (250)
T PRK07774        151 ----------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT  197 (250)
T ss_pred             ----------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC
Confidence                      34579999999999999999999999999999999999999876543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=229.00  Aligned_cols=184  Identities=26%  Similarity=0.381  Sum_probs=157.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++||+++||||++|||++++++|+++|++|++++|+.++.++..+++       ...++++|++|+++++++++++.+.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-------GGLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-------CCcEEEeeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876555444332       1257899999999999999999999


Q ss_pred             CCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         133 YPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++++|++|||||...+  .++.+.+.+++++++++|+.+++.+++.++|.++     ++|++||..+..+.+.       
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-------  149 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------  149 (255)
T ss_pred             cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-------
Confidence            9999999999998543  3455678899999999999999999999999874     5899999766554321       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+++++++++++.++.++||+|++|+||.++|++...
T Consensus       150 --------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~  194 (255)
T PRK06057        150 --------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE  194 (255)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhh
Confidence                    456799999999999999999999999999999999999998654

>PRK09186 flagellin modification protein A; Provisional

Probab=99.97  E-value=1.7e-29  Score=230.21  Aligned_cols=196  Identities=21%  Similarity=0.245  Sum_probs=162.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++....+...+.+++||++|+++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999988888777777554434456778999999999999999999999


Q ss_pred             CCccEEEECCCCCC---CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         134 PKIHVLINNAGVSV---PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       134 g~id~lvnnAG~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++|++|||||...   ..++.+.+.++++..+++|+.+++.+++.++|.|+     +||++||..+..+.. ..... .
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~-~  159 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYE-G  159 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhcc-c
Confidence            99999999998632   23566778999999999999999999999999884     799999977654321 10000 0


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ...    .....|++||+++++++++++.|+.+.||+|++++||.+.|+.
T Consensus       160 ~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        160 TSM----TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             ccc----CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence            000    1234799999999999999999999999999999999998764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=1.1e-29  Score=233.08  Aligned_cols=181  Identities=19%  Similarity=0.226  Sum_probs=147.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH----HHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSI----KNFAKNVMK  131 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v----~~~~~~i~~  131 (384)
                      ++++||||++|||++++++|+++|++|++++|+ .+++++..+++.... +.++.++.+|++|++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            589999999999999999999999999987654 456666656554322 34677899999999865    556666667


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCCh-----------hhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTK-----------EGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGS  189 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS  189 (384)
                      .+|++|+||||||...+.+..+.+.           +++++++++|+.+++.+++++.|+++           +|++++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            7899999999999866555443333           35889999999999999999999873           3777877


Q ss_pred             cccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         190 SLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      ..+..+.+                +..+|++||+|+++++++++.|++++||+|++|+||+++|+
T Consensus       161 ~~~~~~~~----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       161 AMTDQPLL----------------GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             hhccCCCc----------------ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            76654433                66789999999999999999999999999999999999876

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=2.6e-29  Score=227.37  Aligned_cols=187  Identities=23%  Similarity=0.336  Sum_probs=164.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|+.|++.+|+.+++++...++     +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            577899999999999999999999999999999999876665544332     346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++++++|+.+++++++.+.+.+.     ++|++||..+..+.+          
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  147 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------  147 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC----------
Confidence            99999999999987666677778899999999999999999999987653     599999987776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                            ....|+++|+++.++++.++.++.+.|+++++++||+++|++.+...
T Consensus       148 ------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~  194 (245)
T PRK12936        148 ------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN  194 (245)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC
Confidence                  55689999999999999999999999999999999999999875543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=230.43  Aligned_cols=189  Identities=27%  Similarity=0.350  Sum_probs=165.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.+|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567789999999999999999999999999999999877766655555432  35788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||.....+..+.+.+++++++++|+.+++++++.++|.+.     ++|++||..+..+.+         
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~---------  154 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP---------  154 (274)
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------
Confidence            999999999999987666667778899999999999999999999998764     499999987665543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.++.+.||++++++||.++|++...
T Consensus       155 -------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~  199 (274)
T PRK07775        155 -------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWS  199 (274)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCccccc
Confidence                   556899999999999999999999899999999999999997544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=229.03  Aligned_cols=189  Identities=26%  Similarity=0.409  Sum_probs=163.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++++|+++||||+||||.++|++|+++|++|++. .|+.++.++..+++...  +.++.++++|++|++++.++++++.
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~   79 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLK   79 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHH
Confidence            35778999999999999999999999999998774 68776666655555432  3568889999999999999999998


Q ss_pred             HhC------CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCC
Q psy2854         131 KQY------PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       131 ~~~------g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~  201 (384)
                      +++      +++|++|||||.....+..+.+.+.|+.++++|+.+++++++.+++.+.   ++|++||..+..+.+    
T Consensus        80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~----  155 (254)
T PRK12746         80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT----  155 (254)
T ss_pred             HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC----
Confidence            877      4799999999987666777778999999999999999999999999875   699999987765543    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                  +...|++||++++.++++++.++.+.|+++++++||+++|++.+.
T Consensus       156 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        156 ------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             ------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence                        667899999999999999999999999999999999999998654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.5e-29  Score=228.45  Aligned_cols=184  Identities=19%  Similarity=0.200  Sum_probs=160.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      ++||||++|||+++++.|+++|++|++++|+ .+++++..+++........+..+++|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666666665554432223456789999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ++|||||.....+..+.+.+++++++++|+.+++.+++.++|.++     +||++||..+..+.+               
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~---------------  146 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP---------------  146 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC---------------
Confidence            999999987777777889999999999999999999999999885     699999988776554               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCcccc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKG--VDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~  258 (384)
                       +.+.|+++|++++.++++++.|+.+++  |+|+.|+||+++|++.+.
T Consensus       147 -~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        147 -DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence             667899999999999999999997664  999999999999998653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=229.15  Aligned_cols=186  Identities=27%  Similarity=0.373  Sum_probs=167.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.+++.+.||++|+++++++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988877776666543  4678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|++|||||.....+..+.+.++++.++++|+.+++.+++.+++.++     ++|++||..+..+.+           
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------  148 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA-----------  148 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------
Confidence            9999999999987777777778999999999999999999999999874     699999987776544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           +.+.|+++|++++.+++.++.|+.+.||++++++||.++|++..
T Consensus       149 -----~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        149 -----GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR  192 (258)
T ss_pred             -----CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence                 67789999999999999999999999999999999999999854

>KOG1210|consensus

Probab=99.97  E-value=3e-29  Score=222.78  Aligned_cols=188  Identities=23%  Similarity=0.260  Sum_probs=175.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      +.++|||+|+|||+++|.++..+|++|.++.|+.+++.++..++.-...-..+.+..+|++|.+++..+++++++.++++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999888766544457789999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |.+|||||...++.+.+.++++++.++++|++|+++.+++.++.|+      +|+.+||.++..+..             
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~-------------  180 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY-------------  180 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc-------------
Confidence            9999999999999999999999999999999999999999999997      689999999888776             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                         ++++|++||+|+.+++.++++|+.++||+|....|+.+.||.+...+
T Consensus       181 ---GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En  227 (331)
T KOG1210|consen  181 ---GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN  227 (331)
T ss_pred             ---cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc
Confidence               88899999999999999999999999999999999999999876654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=2.5e-29  Score=228.24  Aligned_cols=187  Identities=22%  Similarity=0.287  Sum_probs=166.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|.++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999987777666666443  4578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+.+.|+     ++|++||..+..+.+           
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----------  147 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----------  147 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------
Confidence            9999999999986666677778899999999999999999999998874     699999988766554           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+|+++++++++.++.+.||+++.++||.++|++...
T Consensus       148 -----~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~  192 (250)
T TIGR03206       148 -----GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDD  192 (250)
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHh
Confidence                 567899999999999999999998889999999999999997643

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=1.1e-28  Score=222.99  Aligned_cols=187  Identities=25%  Similarity=0.323  Sum_probs=162.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+++||||++|||++++++|+++|++|++++| +.++.++..+++...  +.++.++.+|++|+++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 544444444444322  457889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+.+.+++++++++|+.+++.+++.++|.++     ++|++||..+..+.+             
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-------------  145 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQF-------------  145 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-------------
Confidence            99999999987666677778999999999999999999999999874     599999987665543             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                         +...|+++|++++.++++++.|+.+.||+++.++||+++|++.+...+
T Consensus       146 ---~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~  193 (242)
T TIGR01829       146 ---GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE  193 (242)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch
Confidence               667899999999999999999999999999999999999998765443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-29  Score=230.09  Aligned_cols=190  Identities=17%  Similarity=0.136  Sum_probs=165.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.......++.++++|++|+++++++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998777666666554322357888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.... .+..+.+.++++.++++|+.+++.+++.+++.+.     +++++||..+..+.+         
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  154 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR---------  154 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC---------
Confidence            9999999999997433 4566678899999999999999999999998874     699999987765443         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||++++.++++++.++...||++++|+||+++|++...
T Consensus       155 -------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        155 -------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence                   567899999999999999999999999999999999999998643

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-29  Score=226.56  Aligned_cols=185  Identities=17%  Similarity=0.162  Sum_probs=156.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+..+|+++||||++|||++++++|+++|++|++++++ .++.++..+++...  +.++.+++||++|.++++++++++.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999887664 44455555555432  4578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +.++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.+.+.     ++|+++|..+..+.+        
T Consensus        83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p--------  154 (258)
T PRK09134         83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP--------  154 (258)
T ss_pred             HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC--------
Confidence            9999999999999987666777789999999999999999999999999874     577777765443332        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                              .+..|++||+++++++++++.++.+. |+|++++||++.|+.
T Consensus       155 --------~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~  195 (258)
T PRK09134        155 --------DFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSG  195 (258)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence                    45689999999999999999999765 999999999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=7.6e-29  Score=224.35  Aligned_cols=187  Identities=21%  Similarity=0.269  Sum_probs=160.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+++||||++|||+++|++|+++|++|++++|+... ..+..+....  .+.++.++++|++|.++++++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998541 1111111111  1356889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+.+.+++++++++|+.+++++++.++|.++     ++|++||..+..+.+             
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-------------  147 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-------------  147 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-------------
Confidence            99999999987666777789999999999999999999999999874     699999987765544             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                         +.+.|++||+|+++++++++.|+.+.||++++++||.++|++.+...+
T Consensus       148 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~  195 (245)
T PRK12824        148 ---GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP  195 (245)
T ss_pred             ---CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH
Confidence               667899999999999999999999999999999999999998765543

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-29  Score=227.70  Aligned_cols=187  Identities=22%  Similarity=0.331  Sum_probs=165.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..+++|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+.  +.++.++.+|+++++++.++++.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999 999999977776666666432  4578889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++++++|++|||||.....+..+.+.++++.++++|+.+++.+++.+++.+.      ++|++||..+..+.+       
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-------  152 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-------  152 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-------
Confidence            9999999999999987666667779999999999999999999999999874      499999987765543       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                               ....|+++|+++++++++++.|+...||+|+.++||+++|++.
T Consensus       153 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        153 ---------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence                     5678999999999999999999999999999999999999974

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-29  Score=226.29  Aligned_cols=186  Identities=24%  Similarity=0.298  Sum_probs=158.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|+++||||++|||.++++.|+++|++|+++. |+.++.++..+++...  +.++.+++||++|+++++++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999998764 5656666655555432  45788999999999999999999999999


Q ss_pred             CccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         135 KIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       135 ~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|||||.... .+..+.+.++++.++++|+.+++.+++.+++.+.        ++|++||..+..+.+.       
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------  152 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN-------  152 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-------
Confidence            99999999998544 3566778999999999999999999999998863        3999999877655431       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              .+..|++||+++++++++++.++.+.||+|+.|+||+++|++...
T Consensus       153 --------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  197 (248)
T PRK06947        153 --------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS  197 (248)
T ss_pred             --------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc
Confidence                    245799999999999999999999999999999999999998653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=257.29  Aligned_cols=189  Identities=25%  Similarity=0.290  Sum_probs=166.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988888777776543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCC--ChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLT--TKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+|++|++|||||........+.  +.+++++++++|+.|++.+++.++|.|+     +||++||.++..+.+       
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  517 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP-------  517 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------
Confidence            99999999999998544443322  2578999999999999999999999885     699999988766544       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +.+.|++||+++++|+++++.|++++||+|++|+||+++|++.+.
T Consensus       518 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        518 ---------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence                     567899999999999999999999999999999999999999754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=226.15  Aligned_cols=177  Identities=25%  Similarity=0.274  Sum_probs=151.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||++|||++++++|+++|++|++++|+.+++++.    .+.  ..++.+++||++|.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL----HTQ--SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHh--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            6899999999999999999999999999999987654433    222  24678899999999999999887642   47


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      |++|||||.....+..+.+.+++++++++|+.|++++++.+.|+|.   ++|++||..+..+.+                
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----------------  136 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP----------------  136 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC----------------
Confidence            9999999975444444568899999999999999999999999875   599999987766544                


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +...|++||+++++++++++.|+.++||++++|+||+++|++.+.
T Consensus       137 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        137 RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence            566899999999999999999999999999999999999998654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.3e-28  Score=223.86  Aligned_cols=191  Identities=19%  Similarity=0.224  Sum_probs=163.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++++++||||++|||.++++.|+++|++|++++|+.+++++..+++...  +.++..+++|+++.++++++++.+.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777666543  457888999999999999999999998


Q ss_pred             CCCccEEEECCCCCCCCCC---------CCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCc
Q psy2854         133 YPKIHVLINNAGVSVPIKE---------KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTI  197 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~  197 (384)
                      ++++|++|||||.......         .+.+.++++.++++|+.+++.+++.+.|.+.      +++++||... .+.+
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~  158 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNM  158 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCC
Confidence            8999999999997543221         4567899999999999999999999998873      4777777543 3332


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                                      +...|++||+|+++++++++.|+.++||++++++||.++|++.+...+.
T Consensus       159 ----------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~  207 (253)
T PRK08217        159 ----------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE  207 (253)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH
Confidence                            5678999999999999999999999999999999999999998665443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-29  Score=228.81  Aligned_cols=182  Identities=18%  Similarity=0.195  Sum_probs=159.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .|+++||||+||||++++++|+++|++|++++|+.+..++..    +.. +.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLK----ARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999865544332    222 346888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|+||||||.....+..+.+.+++++.+++|+.+++.+++.++|.++     ++|++||..+..+.+             
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  143 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP-------------  143 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC-------------
Confidence            99999999997777777778899999999999999999999999864     699999977654433             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         +.+.|++||++++.++++++.++.+.||+++.++||.+.|++...
T Consensus       144 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        144 ---GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence               567899999999999999999999999999999999999998643

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8e-29  Score=224.76  Aligned_cols=185  Identities=25%  Similarity=0.321  Sum_probs=157.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +|+++||||++|||.+++++|+++|++|+++++ ++++.++..+++...  +.++.+++||++|.++++++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999988764 444444444444332  35678899999999999999999999999


Q ss_pred             CccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         135 KIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       135 ~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|||||.... .+..+.+.++|++++++|+.+++.+++.+++.+.        ++|++||..+..+.+.       
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  152 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------  152 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-------
Confidence            99999999998643 3566778899999999999999999999999873        4899999877665431       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              ....|++||+++++++++++.|+.++||+|++++||.+.|++..
T Consensus       153 --------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        153 --------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             --------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence                    23469999999999999999999999999999999999999754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=6.4e-29  Score=254.12  Aligned_cols=188  Identities=22%  Similarity=0.325  Sum_probs=167.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++....+..++..+++|++|+++++++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988777776666654444567889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +.+|++|++|||||+....+..+.+.++|+..+++|+.+++.+++.+++.|+      +||++||..+..+.+       
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~-------  561 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK-------  561 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC-------
Confidence            9999999999999987667777888999999999999999999999998874      599999987766544       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                               +..+|++||+++++++++++.|+.+.||+||+|+||.|.|+
T Consensus       562 ---------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~  602 (676)
T TIGR02632       562 ---------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQG  602 (676)
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecC
Confidence                     66799999999999999999999999999999999998653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=7.3e-29  Score=225.55  Aligned_cols=179  Identities=25%  Similarity=0.340  Sum_probs=159.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.         +..  .+.++.++++|++|+++++++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ--EDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999975         111  145788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.|.|+     +||++||..+..+..         
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------  143 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI---------  143 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC---------
Confidence            999999999999987767777788999999999999999999999999874     599999987654433         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+++++++++++.|++++||+|++++||.++|++..
T Consensus       144 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~  187 (252)
T PRK08220        144 -------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQR  187 (252)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhh
Confidence                   56789999999999999999999999999999999999999854

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=225.09  Aligned_cols=185  Identities=28%  Similarity=0.422  Sum_probs=164.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++++||||+||||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|+++++++++++.+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999987777666666543  457888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCC-ChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLT-TKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+. +.+++++.+++|+.+++.+++.+.|.+.    ++|++||..+..+.+             
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  145 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP-------------  145 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-------------
Confidence            9999999998776667777 8899999999999999999999998774    689999987765544             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         +...|++||+++++++++++.++.+.||++++++||++.|++.+.
T Consensus       146 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  190 (263)
T PRK06181        146 ---TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR  190 (263)
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh
Confidence               667899999999999999999999999999999999999998653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2e-28  Score=222.09  Aligned_cols=189  Identities=22%  Similarity=0.296  Sum_probs=163.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC--CHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA--SFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs--~~~~v~~~~~~i  129 (384)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+. ...++.++.+|++  +.++++++++.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA-GGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEecccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777776766543 2346677788886  789999999999


Q ss_pred             HHhCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .+.++++|++|||||.... .+..+.+.+++++.+++|+.+++.+++.++|.|.     ++|++||..+..+.+      
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------  160 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA------  160 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC------
Confidence            9999999999999998543 3556678899999999999999999999998874     589999987765544      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                ++..|++||+++++++++++.++...||++++++||.++|++..
T Consensus       161 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        161 ----------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA  204 (247)
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh
Confidence                      56689999999999999999999999999999999999999753

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=222.47  Aligned_cols=182  Identities=24%  Similarity=0.229  Sum_probs=159.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..+++... .+.++.++++|++|+++++++++++.+   ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999988777766666543 346789999999999999999998765   46


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      |++|||||.....+..+.+.+++++.+++|+.+++.+++.+.|.|.     ++|++||..+..+.+              
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  143 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA--------------  143 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC--------------
Confidence            9999999987666677778999999999999999999999999875     599999987665543              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                        +...|++||+++++++++++.|+.+.||+|++|+||.++|++.+.
T Consensus       144 --~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~  188 (243)
T PRK07102        144 --SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG  188 (243)
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc
Confidence              556799999999999999999999999999999999999987543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=7.2e-29  Score=211.29  Aligned_cols=162  Identities=33%  Similarity=0.416  Sum_probs=146.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC--chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-TVVLGCRS--MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |+++||||++|||++++++|+++|. +|++++|+  .++.++..+++...  +.++.+++||++++++++++++++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 68889998  66677777777643  5789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      +++|++|||||.....++.+.+.++|++++++|+.+++.+.+.++|. ..+||++||..+..+.+               
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------  143 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSP---------------  143 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSST---------------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCC---------------
Confidence            99999999999988888888899999999999999999999999992 22799999999988776               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHh
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKY  236 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~  236 (384)
                       ++..|++||+|+++|+++++.|+
T Consensus       144 -~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  144 -GMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHhc
Confidence             88899999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.96  E-value=2.6e-28  Score=221.62  Aligned_cols=179  Identities=20%  Similarity=0.309  Sum_probs=155.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||+||||++++++|+++|++|++++|+.++.++..+++     +.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999977655443332     3468889999999999999999999999999


Q ss_pred             cEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||... ..+..+.+.+++++++++|+.|++.+++.++|.+.     ++|++||..+..+.+             
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------  142 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA-------------  142 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC-------------
Confidence            99999999853 34566678999999999999999999999999873     699999987654433             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                         +...|++||++++++++.++.|+.++||++++|+||.+.|++.
T Consensus       143 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        143 ---GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence               5668999999999999999999999999999999999985543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.9e-28  Score=222.17  Aligned_cols=187  Identities=23%  Similarity=0.295  Sum_probs=160.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|+++||||++|||+++|++|+++|++|++++|+.. ..++..++++..  +.++.++++|++|++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999998743 334444444332  35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCCcCcCC
Q psy2854         135 KIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       135 ~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~~~~~~  201 (384)
                      ++|++|||||....  .++.+.+.+++++++++|+.+++.+++.+.+.|.           ++|++||..+..+..    
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  155 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----  155 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence            99999999998543  3566778899999999999999999999998863           389999988766544    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                  +...|++||+++++++++++.|+.++||++++++||.++|++.....
T Consensus       156 ------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~  202 (256)
T PRK12745        156 ------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT  202 (256)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc
Confidence                        55689999999999999999999989999999999999999865543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.8e-28  Score=220.75  Aligned_cols=186  Identities=22%  Similarity=0.280  Sum_probs=160.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||++++++|+++|++|++..|+ .+...+..+.+.+.  +.++..+.+|++++++++++++++.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999887754 33444444444332  35678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      .++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++.+.|.++   ++|++||..+..+.+           
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  149 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY-----------  149 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC-----------
Confidence            999999999999987777777778889999999999999999999999886   499999988765544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           +...|++||+++++++++++.|+.+ +|+++.++||+++|++..
T Consensus       150 -----~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        150 -----GLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHH
Confidence                 6778999999999999999999987 999999999999999753

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.9e-28  Score=219.87  Aligned_cols=191  Identities=29%  Similarity=0.374  Sum_probs=168.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+|+++||||++|||++++++|+++|++|+++ +|+.++.++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 99877776666665542  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+.|.+.     ++|++||..+..+.+         
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------  150 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------  150 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC---------
Confidence            999999999999987555666778999999999999999999999999874     489999987766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                             ....|++||++++.++++++.++.+.||++++++||+++|++.+...+
T Consensus       151 -------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~  198 (247)
T PRK05565        151 -------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE  198 (247)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh
Confidence                   566899999999999999999999999999999999999998776553

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-28  Score=219.27  Aligned_cols=191  Identities=21%  Similarity=0.324  Sum_probs=161.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|...+.++..+++.++.  .+.++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3668899999999999999999999999999997764333333333322221  14578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHH-HhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLI-ERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+. +.++     ++|++||..+..+.+       
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  155 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR-------  155 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC-------
Confidence            999999999999999776777778899999999999999999999999 4443     699999988776544       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|+.||++++.++++++.++++.||++++++||+++|++....
T Consensus       156 ---------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  201 (249)
T PRK12827        156 ---------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA  201 (249)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc
Confidence                     6678999999999999999999998999999999999999987654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-28  Score=214.58  Aligned_cols=158  Identities=18%  Similarity=0.187  Sum_probs=141.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||++|||++++++|+++ ++|++++|+.+                   .++||++|++++++++++    .+++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998742                   368999999999988765    47899


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      ++|||||.....++.+.+.++|++.+++|+.+++++++.+.|.|+   +|+++||..+..+.+                +
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~----------------~  121 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP----------------G  121 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC----------------C
Confidence            999999987667777789999999999999999999999999885   589999887765544                6


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...|++||+++++|+++++.|+ ++||+|++|+||+++|++.
T Consensus       122 ~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        122 GASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             chHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence            7789999999999999999999 8899999999999999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.9e-28  Score=216.39  Aligned_cols=188  Identities=23%  Similarity=0.323  Sum_probs=165.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.+++++||||+|+||++++++|+++|++|++++|++++.++..+++.+.   .+++++++|++|.++++++++++.+.
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987777766666432   56888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++++|++|||||.....++.+.+.+++++++++|+.+++.+++++++.++    ++|++||..+..+..           
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------  148 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA-----------  148 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC-----------
Confidence            99999999999987666777789999999999999999999999998874    489999887654432           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|++||+++.++++.++.|+++.|+++++|+||.+.|++....
T Consensus       149 -----~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~  194 (237)
T PRK07326        149 -----GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT  194 (237)
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc
Confidence                 5567999999999999999999999999999999999999986543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.8e-28  Score=218.61  Aligned_cols=172  Identities=26%  Similarity=0.280  Sum_probs=147.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+....      .     ..++..+.+|++++      ++++.+.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHh
Confidence            47889999999999999999999999999999999975321      0     24678899999987      4455556


Q ss_pred             CCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||... ..+..+.+.+++++++++|+.++++++++++|.+.     ++|++||..+..+.+         
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  135 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG---------  135 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---------
Confidence            789999999999753 24566778999999999999999999999999874     599999988766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|+++|+++++++++++.|+.++||+|++|+||+++|++..
T Consensus       136 -------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        136 -------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence                   56789999999999999999999999999999999999999864

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=213.87  Aligned_cols=181  Identities=19%  Similarity=0.253  Sum_probs=150.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||++++++|+++|++|++++|+.++.++. ++      ..++.++.+|++|+++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QA------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hh------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            6899999999999999999999999999999997664432 11      13567788999999999999998854  489


Q ss_pred             cEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||+..+  .+..+.+.+++++++++|+.+++.+++.++|.++    .++++||..+..+...            
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~------------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD------------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC------------
Confidence            999999998643  3456778899999999999999999999999885    4778887655433210            


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                       ..++..|++||++++.++++++.|+.++||+|++|+||+++|++.+..
T Consensus       141 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~  188 (225)
T PRK08177        141 -GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN  188 (225)
T ss_pred             -CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence             014567999999999999999999999999999999999999997654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.9e-27  Score=234.25  Aligned_cols=188  Identities=23%  Similarity=0.294  Sum_probs=161.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..+++|+++||||++|||++++++|+++|++|++++|...  .+..+++.++.   ....+++|++|+++++++++.+.+
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~--~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA--GEALAAVANRV---GGTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc--HHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999988532  22233333332   235789999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-----CcEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-----QKVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-----~~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||+.....+.+.+.++|+.++++|+.+++++++.+.+.+     .+||++||..+..+.+         
T Consensus       281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~---------  351 (450)
T PRK08261        281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR---------  351 (450)
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---------
Confidence            99999999999999777777788999999999999999999999999954     2799999988766554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             ++..|+++|+++++|+++++.|++++||++++|+||.++|++.+..+
T Consensus       352 -------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~  398 (450)
T PRK08261        352 -------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIP  398 (450)
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccc
Confidence                   66789999999999999999999999999999999999999876543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.96  E-value=2.4e-27  Score=215.21  Aligned_cols=190  Identities=23%  Similarity=0.280  Sum_probs=166.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.++..+..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777766666543  346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc-cCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD-RGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~-~~~~~~~~~~~~~  206 (384)
                      ++++|++|||||.....+..+.+.+++++.+++|+.+++.+++.++|.+.     ++|++||..+. .+.+         
T Consensus        81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~---------  151 (251)
T PRK12826         81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYP---------  151 (251)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCC---------
Confidence            99999999999987776777778999999999999999999999998764     58999998765 3322         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||++++.++++++.++.+.|++++.++||.+.|+..+...
T Consensus       152 -------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~  198 (251)
T PRK12826        152 -------GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG  198 (251)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC
Confidence                   56789999999999999999999889999999999999999865543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=4.7e-27  Score=212.75  Aligned_cols=190  Identities=23%  Similarity=0.349  Sum_probs=164.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||+||||++++++|+++|++|+++.|+.++ .++..+++...  +.++..+.+|+++++++.++++++.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888887653 34444444332  46788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||.....+..+.+.+++++++++|+.+++.+.+.+.+.+.     ++|++||..+..+.+         
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~---------  150 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP---------  150 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC---------
Confidence            999999999999987766666778899999999999999999999999864     599999987666554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|+++|++++.++++++.++...||++++++||+++|++.+...
T Consensus       151 -------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~  197 (248)
T PRK05557        151 -------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP  197 (248)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC
Confidence                   56789999999999999999999989999999999999999876554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=216.85  Aligned_cols=181  Identities=22%  Similarity=0.269  Sum_probs=158.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++    .+.++.++++|++|.+++.++++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999999987766655544    2357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+.+.++|++.+++|+.+++.+.+.+++.+.     ++|++||..+... .             
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~-------------  143 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-L-------------  143 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-C-------------
Confidence            99999999987666677778999999999999999999999988764     5899988654321 1             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         +.+.|++||++++.++++++.|+.++||+|++++||+++|++..
T Consensus       144 ---~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        144 ---GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence               44579999999999999999999999999999999999999854

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.96  E-value=2.4e-27  Score=214.76  Aligned_cols=185  Identities=23%  Similarity=0.322  Sum_probs=158.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+++||||+||||++++++|+++|++|++ ..|+.++.++...++...  +.++..+++|++|+++++++++++.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999976 467766666666665442  456888999999999999999999999999


Q ss_pred             ccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         136 IHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       136 id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|||||... ..+..+.+.++++.++++|+.+++.+++.+++.+.        ++|++||..+..+.+.        
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------  151 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------  151 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC--------
Confidence            999999999753 34566778899999999999999999999999874        3999999877655431        


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ....|+++|++++.++++++.|+.++||++++++||.++|++...
T Consensus       152 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~  196 (247)
T PRK09730        152 -------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS  196 (247)
T ss_pred             -------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccccc
Confidence                   234699999999999999999999999999999999999998543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-27  Score=215.62  Aligned_cols=179  Identities=25%  Similarity=0.223  Sum_probs=153.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||+||||++++++|+++|++|++++|+.++.++..+.....  +.++.++++|++|+++++++.+      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999876665554443332  3468889999999998877643      47


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+.+.++++..+++|+.+++.+++.+++.+.     +||++||..+..+.+             
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-------------  140 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGP-------------  140 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCC-------------
Confidence            99999999997777788889999999999999999999999998764     699999987655443             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         +...|++||++++.++++++.++.+.||++++|+||++.|++...
T Consensus       141 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~  185 (257)
T PRK09291        141 ---FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT  185 (257)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence               566899999999999999999999999999999999999988643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=215.92  Aligned_cols=181  Identities=22%  Similarity=0.331  Sum_probs=151.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC-
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK-  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~-  135 (384)
                      |+++||||++|||+++|++|+++|++|++++|+..+   ..+++.+.. +.+++++++|++|+++++++++++.+.++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH---HHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            689999999999999999999999999999998632   122222221 357888999999999999999999877653 


Q ss_pred             -cc--EEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         136 -IH--VLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       136 -id--~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                       ++  ++|||||...+ .++.+.+.++|++.+++|+.+++.+++.++|.++      +||++||..+..+.+        
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  149 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF--------  149 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC--------
Confidence             22  89999998543 4567789999999999999999999999999873      589999987654443        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+|++++++.++.|++  +.||+|++|+||+++|++..
T Consensus       150 --------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        150 --------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             --------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence                    677899999999999999999975  56899999999999999854

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.8e-27  Score=212.75  Aligned_cols=174  Identities=23%  Similarity=0.325  Sum_probs=151.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.      .       ....++++|++|.++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D-------FPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c-------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999998643      0       012467899999999999999998876


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                       ++|++|||||.....++.+.+.+++++++++|+.+++.+.+.++|.++     ++|++||... .+.+           
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~-----------  134 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGAL-----------  134 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCC-----------
Confidence             689999999997777777778999999999999999999999999874     6999998753 2322           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           ....|++||+++++++++++.|+++.||++++|+||+++|++.+.
T Consensus       135 -----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        135 -----DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence                 556899999999999999999999999999999999999998754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.95  E-value=1.7e-27  Score=214.32  Aligned_cols=175  Identities=20%  Similarity=0.232  Sum_probs=141.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++++||||++|||+++|++|+++|  ..|++..|+...  +        ....++.+++||+++.++++++.    ++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLS----EQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence            479999999999999999999985  567666665421  1        12357888999999999888753    4568


Q ss_pred             CccEEEECCCCCCC------CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         135 KIHVLINNAGVSVP------IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       135 ~id~lvnnAG~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++|++|||||....      .++.+.+.+.|++.+++|+.+++.+++.++|.|+     +++++||..+.....      
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~------  140 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN------  140 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC------
Confidence            99999999998642      2455678899999999999999999999999885     588888765432110      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD--KGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ..+++..|++||+++++|+++|+.|+.+  .||+|++|+||+++|++.+.
T Consensus       141 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~  190 (235)
T PRK09009        141 -------RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP  190 (235)
T ss_pred             -------CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc
Confidence                   0115668999999999999999999986  69999999999999999754

>PRK09135 pteridine reductase; Provisional

Probab=99.95  E-value=1.6e-26  Score=209.50  Aligned_cols=186  Identities=20%  Similarity=0.269  Sum_probs=154.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++++++||||+||||++++++|+++|++|++++|+. +..++..+++... .+..+.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL-RPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999864 3344444444332 2346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++++|++|||||.....+..+.+.++++.++++|+.|++.+++++.|.+.    .+++++|..+..+.+           
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  151 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLK-----------  151 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCC-----------
Confidence            99999999999987666666678889999999999999999999999875    356665543332221           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           +...|++||++++.++++++.++.+ ++++++++||++.|++.+
T Consensus       152 -----~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        152 -----GYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence                 6678999999999999999999865 799999999999999854

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=1.3e-26  Score=209.69  Aligned_cols=188  Identities=21%  Similarity=0.349  Sum_probs=165.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.++.+...+++...  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999988777666665543  467889999999999999999999998


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++.++.|+.+++.+++.+.|.+.     ++|++||..+..+..          
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~----------  149 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP----------  149 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC----------
Confidence            99999999999986666666778999999999999999999999998763     799999876654432          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|+.+|++++.+++++++++.+.|+++++++||.+.|++...
T Consensus       150 ------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~  194 (246)
T PRK05653        150 ------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG  194 (246)
T ss_pred             ------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence                  567899999999999999999998899999999999999998654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.5e-27  Score=212.25  Aligned_cols=179  Identities=25%  Similarity=0.265  Sum_probs=153.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.++.++..+    .   ....++.+|+++.++++++++.   
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~---~~~~~~~~D~~~~~~v~~~~~~---   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----E---TGCEPLRLDVGDDAAIRAALAA---   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----H---hCCeEEEecCCCHHHHHHHHHH---
Confidence            45789999999999999999999999999999999998765443322    2   1355788999999988887665   


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc------CcEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l------~~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                       .+++|++|||||.....+..+.+.+++++.+++|+.+++.+++++.+.+      .++|++||..+..+.+        
T Consensus        75 -~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  145 (245)
T PRK07060         75 -AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP--------  145 (245)
T ss_pred             -hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------
Confidence             5789999999998766666677889999999999999999999999876      3699999987766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||++++.++++++.++.+.||++++++||.++|++.+
T Consensus       146 --------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        146 --------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             --------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence                    56689999999999999999999989999999999999999854

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.6e-27  Score=212.70  Aligned_cols=176  Identities=19%  Similarity=0.269  Sum_probs=149.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-HHHhC---
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN-VMKQY---  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-i~~~~---  133 (384)
                      +++||||+||||++++++|+++|++|++++|+.++.  .    ... .+.++.++++|++|.+++++++++ +.+.+   
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            799999999999999999999999999999986531  1    111 245788899999999999998776 55544   


Q ss_pred             CCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         134 PKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       134 g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +++|++|||||.... .+..+.+.+++++.+++|+.+++.+++.+.+.+.     +||++||..+..+.+          
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  145 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA----------  145 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC----------
Confidence            479999999998654 4566678999999999999999999999999874     699999987765544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            ++..|++||++++++++.++.+ .+.||++++|+||+++|++..
T Consensus       146 ------~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        146 ------GWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence                  6778999999999999999999 788999999999999999753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4e-26  Score=206.67  Aligned_cols=189  Identities=21%  Similarity=0.299  Sum_probs=161.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH-HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE-ALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.|+++||||+|+||++++++|+++|++|++..|+.++..+ ..+.+...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999998887776544333 33333322  45688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+.+.++     ++|++||..+..+..         
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~---------  151 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP---------  151 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC---------
Confidence            999999999999987666777778999999999999999999999988764     699999987765543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|+.+|++++++++.++.++.+.|++++.++||.+.|++....
T Consensus       152 -------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (249)
T PRK12825        152 -------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT  197 (249)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence                   5678999999999999999999988899999999999999987654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.5e-27  Score=209.97  Aligned_cols=185  Identities=22%  Similarity=0.249  Sum_probs=162.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||+++||++++++|+++|++|++++|+.++..+..+++..    .....+.+|++|.++++++++++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998776666655543    24567889999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|++|||||.....+..+.+.+++++.+++|+.+++.+++.+.|.++     ++|++||..+..+.+          
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  149 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP----------  149 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC----------
Confidence            99999999999986655666678999999999999999999999998763     699999987765543          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|+++|++++.++++++.++.+.||+++.++||.+.|++.+
T Consensus       150 ------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~  193 (239)
T PRK12828        150 ------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR  193 (239)
T ss_pred             ------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchh
Confidence                  56789999999999999999999888999999999999998654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=7.1e-27  Score=240.26  Aligned_cols=189  Identities=23%  Similarity=0.329  Sum_probs=168.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..++.||+++||||+||||++++++|+++|++|++++|+.++.++..+++...   .++.++.+|++|+++++++++++.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~  493 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAA  493 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999987776666555432   468899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +.+|++|++|||||+....++.+.+.++|+.++++|+.|++.+++.+.+.++      ++|++||..+..+.+       
T Consensus       494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~-------  566 (681)
T PRK08324        494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP-------  566 (681)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC-------
Confidence            9999999999999998777888889999999999999999999999998764      599999987765544       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc--cCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC--YTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v--~T~~~~~  258 (384)
                               +...|++||+++++++++++.|+.+.||+|++|+||.+  .|++...
T Consensus       567 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~  613 (681)
T PRK08324        567 ---------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG  613 (681)
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc
Confidence                     66789999999999999999999999999999999999  8887643

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.95  E-value=9.6e-27  Score=211.88  Aligned_cols=183  Identities=22%  Similarity=0.326  Sum_probs=160.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||+++||++++++|+++|++|++++|+.++.++..+++...  +.++..+++|++|.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999987766666555432  357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|||||.....+..+.+.+++++++++|+.|++.+++.+++.++     ++|++||..+..+.+             
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-------------  145 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-------------  145 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-------------
Confidence            99999999987666666678899999999999999999999998763     699999876655543             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                         ....|+++|+++++++++++.++.+.||+++.++||.+.|++.
T Consensus       146 ---~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~  188 (255)
T TIGR01963       146 ---FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV  188 (255)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence               5678999999999999999999988899999999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.7e-27  Score=211.81  Aligned_cols=186  Identities=20%  Similarity=0.221  Sum_probs=150.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ ..+...+++...  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999753 344444445432  45688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      .++++|++|||||.....      ..+++..+++|+.+++++++.+.|.|.   ++|++||..+..... .      .. 
T Consensus        81 ~~~~~d~vi~~ag~~~~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-~------~~-  146 (248)
T PRK07806         81 EFGGLDALVLNASGGMES------GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-V------KT-  146 (248)
T ss_pred             hCCCCcEEEECCCCCCCC------CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-c------cC-
Confidence            999999999999874221      123456899999999999999999875   699999864321100 0      00 


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         .+.+..|++||++++.++++++.|+++.||+|++|+||.+.|++..
T Consensus       147 ---~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        147 ---MPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             ---CccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh
Confidence               0135689999999999999999999999999999999999998643

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8e-27  Score=209.25  Aligned_cols=172  Identities=19%  Similarity=0.192  Sum_probs=147.9

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccEE
Q psy2854          60 IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVL  139 (384)
Q Consensus        60 lITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~l  139 (384)
                      +||||++|||++++++|+++|++|++++|+.++.++..+++..   +.+++++.+|++|++++++++++    .+++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence            5999999999999999999999999999997776665555431   45788899999999999888775    4789999


Q ss_pred             EECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         140 INNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       140 vnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      |||||.....++.+.+.+++++++++|+.+++.+++  .+.+.   +||++||..+..+.+                +.+
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~----------------~~~  135 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSA----------------SGV  135 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCC----------------cch
Confidence            999998777777777899999999999999999999  34443   799999988766544                667


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .|++||+++++++++++.|+.+  |+|++++||+++|++...
T Consensus       136 ~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        136 LQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence            8999999999999999999864  999999999999998643

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=211.04  Aligned_cols=186  Identities=21%  Similarity=0.297  Sum_probs=158.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||+||||++++++|+++|++|++++|+.+..++..++.    +..++.++.+|++|+++++++++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL----PGAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999876555443333    223678899999999999999999999


Q ss_pred             hCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .++++|++|||||.. ...+....+.+++++++++|+.+++.+++.+++.+.      +++++||..+..+.+       
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~-------  155 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP-------  155 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC-------
Confidence            999999999999986 344556678899999999999999999999988762      477788776655543       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               +...|+.+|++++.++++++.++...++++++++||+++|++.+
T Consensus       156 ---------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~  199 (264)
T PRK12829        156 ---------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR  199 (264)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence                     55679999999999999999999888999999999999999854

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.5e-26  Score=207.14  Aligned_cols=178  Identities=22%  Similarity=0.250  Sum_probs=154.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+|+++||||+||||+++|++|+++|+ +|++++|+.++.++         .+.++.++.+|++|.++++++++.   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            46789999999999999999999999999 99999998755433         145788999999999998887764   


Q ss_pred             hCCCccEEEECCCC-CCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                       .+++|++|||||. ....++.+.+.+++++.+++|+.+++.+++++.|.++     +++++||..+..+.+        
T Consensus        71 -~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~--------  141 (238)
T PRK08264         71 -ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP--------  141 (238)
T ss_pred             -cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC--------
Confidence             4689999999998 5556677779999999999999999999999998874     489999987765544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|+++|++++.+++.++.++.+.|+++++++||.++|++....
T Consensus       142 --------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~  187 (238)
T PRK08264        142 --------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL  187 (238)
T ss_pred             --------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC
Confidence                    6678999999999999999999999999999999999999986543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4.3e-26  Score=205.55  Aligned_cols=184  Identities=20%  Similarity=0.154  Sum_probs=155.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||.++++.|+++|++|++++|+.++.++..+++..   ..+++++++|++++++++++++++.+.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998766655444433   246888999999999999999999888


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++++|.+|+|+|.....+..  +.++++.++++|+.+++.+.+.++|.++   ++|++||..+..+..            
T Consensus        79 ~~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  144 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS------------  144 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC------------
Confidence            89999999999975433332  3488999999999999999999999876   588888876532111            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                         +....|++||++++.++++++.++.+.||++++|+||+++|++.
T Consensus       145 ---~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        145 ---PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence               15568999999999999999999999999999999999999874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.94  E-value=1.1e-25  Score=202.75  Aligned_cols=184  Identities=24%  Similarity=0.336  Sum_probs=158.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      ++|||++++||.+++++|+++|++|++++|+. +..++..+++...  +.+++++++|++|+++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 3444444444332  45688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ++|||||.....+..+.+.+++++.+++|+.+++.+++.+.+.+.     +++++||..+..+.+               
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---------------  143 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---------------  143 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC---------------
Confidence            999999986655666678899999999999999999999998763     699999987776654               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                       +...|+++|++++.++++++.++...|++++.++||.++|++....+
T Consensus       144 -~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~  190 (239)
T TIGR01830       144 -GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS  190 (239)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC
Confidence             56789999999999999999999989999999999999998765443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.4e-26  Score=205.46  Aligned_cols=171  Identities=21%  Similarity=0.173  Sum_probs=130.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.....   +.. .   ......+++|++|.+++++       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~---~~~-~---~~~~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS---ESN-D---ESPNEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh---hhh-c---cCCCeEEEeeCCCHHHHHH-------
Confidence            4578999999999999999999999999999999999862211   111 1   1122568999999987753       


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------c-EEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------K-VVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~-iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .++++|+||||||+...   .+.+.+++++++++|+.|++++++.++|.|.       + +++.+|.++..+ +      
T Consensus        76 ~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~------  145 (245)
T PRK12367         76 QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-A------  145 (245)
T ss_pred             hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-C------
Confidence            45789999999998432   3457899999999999999999999999883       2 444444433221 1      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHH---HHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFG---AELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~---~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                                ..+.|++||+|+..+.   ++++.|+.+.|++|+.++||.++|++.
T Consensus       146 ----------~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~  191 (245)
T PRK12367        146 ----------LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN  191 (245)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence                      3457999999986543   455556678899999999999999873

>PRK08017 oxidoreductase; Provisional

Probab=99.94  E-value=1e-25  Score=205.40  Aligned_cols=179  Identities=27%  Similarity=0.317  Sum_probs=154.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g~  135 (384)
                      |+++||||+||||++++++|+++|++|++++|+.++.+..    .+    ..+..++||++|.++++++++++.+.. ++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987654432    21    236778999999999999999887754 68


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|.+|||||.....+..+.+.+++++++++|+.|++.+++.+++.+.     ++|++||..+..+.+             
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------------  141 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP-------------  141 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC-------------
Confidence            99999999987666777789999999999999999999999998774     599999987665443             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                         ....|++||++++.++++++.++.+.|+++++++||.+.|++.+..
T Consensus       142 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  187 (256)
T PRK08017        142 ---GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV  187 (256)
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc
Confidence               5678999999999999999999999999999999999999876543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.9e-25  Score=195.00  Aligned_cols=178  Identities=20%  Similarity=0.212  Sum_probs=145.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||++++++|+++|++|++++|+.++.++    +..    ..+.++++|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQA----LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHh----ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            589999999999999999999999999999998655433    222    1356789999999999998877642  479


Q ss_pred             cEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |++|||||....  .+..+.+.+++++++++|+.+++.+++.+.|.+.    ++++++|..+..+....           
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  140 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG-----------  140 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC-----------
Confidence            999999998532  3455668999999999999999999999999874    58899888765543210           


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                        .....|+++|++++++++.++.++  .+++|++|+||+++|++.++.
T Consensus       141 --~~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~  185 (222)
T PRK06953        141 --TTGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ  185 (222)
T ss_pred             --CCccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC
Confidence              022369999999999999999886  479999999999999997653

>KOG1478|consensus

Probab=99.93  E-value=9.5e-25  Score=187.29  Aligned_cols=201  Identities=23%  Similarity=0.347  Sum_probs=171.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK-----ATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G-----~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      ..|+++|||++||||.+++++|.+..     .+++++||+.++.+++...+++.++  ..++.++.+|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            45899999999999999999999763     3588999999999999999999887  4578899999999999999999


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCC---------------------------CCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKE---------------------------KLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~---------------------------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      ++.++|.++|.+..|||+.....+                           ...+.|++..+|++|++|++.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            999999999999999998531110                           12467888999999999999999999998


Q ss_pred             cC-----cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         181 IQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       181 l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +-     .+|++||..+....-+++++.-.+       +...|..||.+...+.-++.+.+.+.|+.-++|+||..-|.+
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~k-------g~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSK-------GKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhc-------CCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence            85     599999998887766666554443       455799999999999999999999999999999999999998


Q ss_pred             cccCchH
Q psy2854         256 FRHADIK  262 (384)
Q Consensus       256 ~~~~~~~  262 (384)
                      ....-..
T Consensus       235 ~~~~l~~  241 (341)
T KOG1478|consen  235 FSEYLNP  241 (341)
T ss_pred             hhhhhhh
Confidence            7655433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=6.2e-24  Score=238.18  Aligned_cols=182  Identities=20%  Similarity=0.187  Sum_probs=157.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCch------------------------------------------
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMI------------------------------------------   91 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~------------------------------------------   91 (384)
                      +|+++|||||++|||+++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchh
Q psy2854          92 -----RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN  166 (384)
Q Consensus        92 -----~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN  166 (384)
                           ...+..+++.+  .+.++.++.||++|.++++++++++.+. ++||+||||||+.....+.+.+.++|++++++|
T Consensus      2076 ~~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 00111122221  2467889999999999999999999887 689999999999877888889999999999999


Q ss_pred             hhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEE
Q psy2854         167 HVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSV  245 (384)
Q Consensus       167 ~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~  245 (384)
                      +.|.+++++.+.+.+ ++||++||..+..+.+                ++..|+++|++++.+++.++.++.  +++|++
T Consensus      2153 v~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~----------------gqs~YaaAkaaL~~la~~la~~~~--~irV~s 2214 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENIKLLALFSSAAGFYGNT----------------GQSDYAMSNDILNKAALQLKALNP--SAKVMS 2214 (2582)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEechhhcCCCC----------------CcHHHHHHHHHHHHHHHHHHHHcC--CcEEEE
Confidence            999999999998876 4799999999887765                778999999999999999999874  599999


Q ss_pred             EecCcccCCccc
Q psy2854         246 VCPGWCYTNLFR  257 (384)
Q Consensus       246 v~PG~v~T~~~~  257 (384)
                      |+||.++|+|..
T Consensus      2215 I~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2215 FNWGPWDGGMVN 2226 (2582)
T ss_pred             EECCeecCCccc
Confidence            999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1204|consensus

Probab=99.92  E-value=3.3e-25  Score=187.93  Aligned_cols=184  Identities=21%  Similarity=0.201  Sum_probs=147.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+|++++||+|+|||..++..+.+++-.....+++....+  .+.++...+ +.......|++...-..++.+..+.++|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4789999999999999999988888766444444322222  222222222 3344456778877778888999999999


Q ss_pred             CccEEEECCCCCCCC---CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         135 KIHVLINNAGVSVPI---KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       135 ~id~lvnnAG~~~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ..|++|||||...+.   ..+..+.++|++.+++|+++.+.+.+.++|.++      .+||+||.++..+..        
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~--------  153 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS--------  153 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc--------
Confidence            999999999986653   223568899999999999999999999999886      389999999888766        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +|++||++|+|.++|.+.|+.|.. .+|+|.++.||.+||+|...
T Consensus       154 --------~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~  197 (253)
T KOG1204|consen  154 --------SWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVC  197 (253)
T ss_pred             --------HHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHH
Confidence                    899999999999999999999965 79999999999999999754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-23  Score=187.00  Aligned_cols=173  Identities=27%  Similarity=0.323  Sum_probs=145.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .|+++||||+|+||++++++|+++ ++|++++|+.++.++..+    ..  ..+.++++|++|+++++++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA----EL--PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH----Hh--ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            579999999999999999999999 999999998665443322    21  24778899999999988877653    58


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      +|++||+||.....+..+.+.+++++++++|+.+++.+++.+++.++    ++|++||..+..+.+              
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~--------------  137 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP--------------  137 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC--------------
Confidence            99999999987666666778999999999999999999999988764    699999987765443              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                        +...|+.+|++++.+++.++.++... |++++++||.++|++.
T Consensus       138 --~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~  179 (227)
T PRK08219        138 --GWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQ  179 (227)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHh
Confidence              56689999999999999999988766 9999999999988754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=1.1e-22  Score=194.70  Aligned_cols=169  Identities=21%  Similarity=0.194  Sum_probs=129.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||+||||++++++|+++|++|++++|+.++.++..   ...  ...+..+.+|++|++++.+.       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~-------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAEL-------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHH-------
Confidence            357899999999999999999999999999999999876543322   111  23467789999999877653       


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------c--EEEEcCcccccCCcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------K--VVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~--iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++++|++|||||+...   .+.+.+++++++++|+.|++.+++.++|.|+       +  +|++|| +. ...+      
T Consensus       243 l~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~------  311 (406)
T PRK07424        243 LEKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPA------  311 (406)
T ss_pred             hCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCC------
Confidence            3589999999998533   2458899999999999999999999999884       1  344433 22 1111      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                ..+.|++||+|+.+++. ++++.  .++.+..++||.++|++..
T Consensus       312 ----------~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~  352 (406)
T PRK07424        312 ----------FSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP  352 (406)
T ss_pred             ----------CchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc
Confidence                      34679999999999974 55443  4677778899999998853

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.91  E-value=1.7e-22  Score=171.76  Aligned_cols=187  Identities=17%  Similarity=0.173  Sum_probs=160.9

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .|+||+++|+|-.  +.|+..+|+.|.++|+++..+..++ ++++..+++.+..+  ...+++||+++.++++++++++.
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence            5899999999975  7999999999999999999998875 78888888877643  35678999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSV----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|.|||+-|...    .+.+.+++.|+|...+++..++...+.+++.|.|.   +++.++=..+....|      
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vP------  153 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVP------  153 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecC------
Confidence            99999999999999854    24667789999999999999999999999999997   566665444444333      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                .+...+.+|+++++-+|.|+.++.++|||||.|+-|+++|=-...
T Consensus       154 ----------nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasg  198 (259)
T COG0623         154 ----------NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASG  198 (259)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhc
Confidence                      455789999999999999999999999999999999999955443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.2e-22  Score=173.90  Aligned_cols=174  Identities=20%  Similarity=0.164  Sum_probs=144.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHH---HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEA---LEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |+++||||++|||++++++|+++|+ .|++.+|+.+..+..   .+++++.  +.++.++.+|++++++++++++++.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876554332   2333322  457888999999999999999999998


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      ++++|.+|||||.....+..+.+.+++++++++|+.+++.+.+.+.+.- .+++++||..+..+.+              
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~--------------  144 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP--------------  144 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC--------------
Confidence            9999999999998666666777899999999999999999999986643 4789999987765544              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY  252 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~  252 (384)
                        +...|+++|++++.+++.++.    .|+++..++||+++
T Consensus       145 --~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      145 --GQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             --CchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence              567899999999999877654    48999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.89  E-value=8e-23  Score=184.75  Aligned_cols=163  Identities=22%  Similarity=0.193  Sum_probs=126.9

Q ss_pred             HHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCC
Q psy2854          72 TAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE  151 (384)
Q Consensus        72 ~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~  151 (384)
                      +|++|+++|++|++++|+.++.+     .        ..++++|++|.++++++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876531     1        1347899999999999988774   68999999999742    


Q ss_pred             CCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCC---------CCcCcCc--ccCCCChhh
Q psy2854         152 KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDN---------LNGEKGF--VQKGHSNPA  217 (384)
Q Consensus       152 ~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~  217 (384)
                          .+.+++++++|+.+++.+++.++|.|+   +||++||.++.........         ......+  ..+.++...
T Consensus        61 ----~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (241)
T PRK12428         61 ----TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATG  136 (241)
T ss_pred             ----CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccH
Confidence                135789999999999999999999875   7999999987642111000         0000000  011226678


Q ss_pred             hhhcHHHHHHHHHHHH-HHhCCCCcEEEEEecCcccCCcccc
Q psy2854         218 YCNSKLMNYYFGAELY-LKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la-~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      |++||+|+++++++++ .|++++||+||+|+||.++|+|.++
T Consensus       137 Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence            9999999999999999 9999999999999999999999764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.86  E-value=2.5e-20  Score=175.74  Aligned_cols=168  Identities=14%  Similarity=0.111  Sum_probs=133.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++||+++||||+|+||++++++|+++|  ++|++.+|+..+..+    +.......++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~----~~~~~~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE----MQQKFPAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH----HHHHhCCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999986  789999887554332    2222223468889999999998887664    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                         ++|++||+||.... +..+   .+.++.+++|+.|+.++++++.+.- +++|++||.....                
T Consensus        74 ---~iD~Vih~Ag~~~~-~~~~---~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~----------------  130 (324)
T TIGR03589        74 ---GVDYVVHAAALKQV-PAAE---YNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN----------------  130 (324)
T ss_pred             ---cCCEEEECcccCCC-chhh---cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC----------------
Confidence               58999999997432 2222   2234689999999999999999864 4799999864221                


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                         +...|++||++.+.++++++.+.+..|+++++++||.+..+-
T Consensus       131 ---p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~  172 (324)
T TIGR03589       131 ---PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSR  172 (324)
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCC
Confidence               345799999999999999988888889999999999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.85  E-value=4e-20  Score=176.34  Aligned_cols=186  Identities=16%  Similarity=0.035  Sum_probs=140.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++||+++||||+|+||.+++++|+++|++|++++|+..........+..   ..++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            3578999999999999999999999999999999987654333222211   235778899999999998888754    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                       ++|++||+||....    ..+.+++...+++|+.++.++++++.+.-  +++|++||...+........+.+...    
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~----  145 (349)
T TIGR02622        75 -KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDP----  145 (349)
T ss_pred             -CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCC----
Confidence             68999999996322    22556677889999999999999987642  47999999765532110011111111    


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCC----CCcEEEEEecCcccCCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYAD----KGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~----~gI~v~~v~PG~v~T~~  255 (384)
                      ..+...|+.||.+.+.+++.++.++.+    +|+++++++|+.+..|.
T Consensus       146 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       146 LGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            124568999999999999999988754    48999999999999874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=4.3e-20  Score=159.19  Aligned_cols=173  Identities=17%  Similarity=0.214  Sum_probs=135.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-TVVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++||||.+|||..+++.|+++|. +|++++|+.   ...++..+++++.  +.++.+++||++|+++++++++++.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            789999999999999999999976 699999993   2344566666654  6789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ++||.+||+||.....++.+.++++++.++...+.|..++.+.+.+. +..+|.+||.++..|.+               
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~---------------  144 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP---------------  144 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T---------------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc---------------
Confidence            99999999999988888889999999999999999999999988653 45789999999988877               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY  252 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~  252 (384)
                       +...|+++.+.++.|++..+..    |.++.+|+-|..+
T Consensus       145 -gq~~YaaAN~~lda~a~~~~~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  145 -GQSAYAAANAFLDALARQRRSR----GLPAVSINWGAWD  179 (181)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred             -chHhHHHHHHHHHHHHHHHHhC----CCCEEEEEccccC
Confidence             8899999999999998876553    7788888877543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2.4e-19  Score=169.21  Aligned_cols=189  Identities=14%  Similarity=0.044  Sum_probs=138.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+++||||+|+||++++++|+++|++|++++|+.++.++............++.++.+|++|.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            3789999999999999999999999999999988876544332211111112468889999999998887765       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcC----cCCCCcCcCc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTID----FDNLNGEKGF  208 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~----~~~~~~~~~~  208 (384)
                      ++|++|||||....    ..+.+.+...+++|+.+++++++++.+.+  +++|++||..+..+...    ...+++....
T Consensus        77 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~  152 (325)
T PLN02989         77 GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFT  152 (325)
T ss_pred             CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCC
Confidence            58999999996421    22445678899999999999999998865  48999999876654321    1112222111


Q ss_pred             cc--CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQ--KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~--~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ..  .......|+.||.+.+.+++.+++++   |++++.++|+.+..|...
T Consensus       153 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        153 NPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             chhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCC
Confidence            00  00013569999999999998887664   899999999999998754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.83  E-value=3.5e-19  Score=174.52  Aligned_cols=175  Identities=18%  Similarity=0.148  Sum_probs=135.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-------cCCcEEEEEeecCCHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-------QDGQIVLMELNLASFDSIKN  124 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~Dvs~~~~v~~  124 (384)
                      ....||+++||||+||||++++++|+++|++|++++|+.++++...+++.+..       ...++.++.+|++|.+++++
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            34578999999999999999999999999999999999888776665553310       01358899999999988765


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccc-cCCcCcCCC
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMD-RGTIDFDNL  202 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~-~~~~~~~~~  202 (384)
                      .       ++++|+||||||....      ...++...+++|+.|..++++++.+.- ++||++||..+. .+..     
T Consensus       156 a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p-----  217 (576)
T PLN03209        156 A-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFP-----  217 (576)
T ss_pred             H-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCcc-----
Confidence            3       4689999999997421      122467789999999999999988764 589999998653 1111     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                 . ..|. +|+++..+.+.+..++...||++++|+||++.|++.+
T Consensus       218 -----------~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        218 -----------A-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             -----------c-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence                       1 1243 6777877888888888889999999999999987643

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.83  E-value=8.8e-19  Score=163.41  Aligned_cols=189  Identities=14%  Similarity=-0.003  Sum_probs=136.0

Q ss_pred             CCCCEEEEeCCCCchhHH--HHHHHHHCCCEEEEEecCchhHH-----------HHHHHHHHHhcCCcEEEEEeecCCHH
Q psy2854          54 MEGKVCIITGANSGIGYE--TAKELAKLKATVVLGCRSMIRGQ-----------EALEKLKKEVQDGQIVLMELNLASFD  120 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a--~a~~l~~~G~~Vi~~~r~~~~~~-----------~~~~~l~~~~~~~~~~~~~~Dvs~~~  120 (384)
                      -.+|++||||+++|||.+  +|++| ++|++|+++++..+..+           +..++..+.. +..+..+.||+++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHH
Confidence            357999999999999999  89999 99999888886432221           1222222222 345778999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCCCCCC-----------------C----C-------------CCChhhHHHHhchh
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIK-----------------E----K-------------LTTKEGYEVHFGIN  166 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~~~~~-----------------~----~-------------~~~~~~~~~~~~vN  166 (384)
                      +++++++++.+++|++|+||||+|......                 +    .             ..+.++++.++  +
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~  194 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--K  194 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--H
Confidence            999999999999999999999999863211                 1    0             12344444443  3


Q ss_pred             hhHH---HHH--HHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCC
Q psy2854         167 HVGH---FLL--TNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD  238 (384)
Q Consensus       167 ~~~~---~~l--~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~  238 (384)
                      ++|.   ...  .....+.|.   ++|.+|........+.+              ....-+.+|++++.-++.|+.++++
T Consensus       195 vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y--------------~~g~mG~AKa~LE~~~r~La~~L~~  260 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIY--------------WDGTIGKAKKDLDRTALALNEKLAA  260 (398)
T ss_pred             hhccchHHHHHHHHHhcccccCCcEEEEEecCCcceeeccc--------------CCchHHHHHHHHHHHHHHHHHHhhh
Confidence            3443   122  233344453   67877776655444321              1235689999999999999999999


Q ss_pred             CCcEEEEEecCcccCCccccCc
Q psy2854         239 KGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       239 ~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      .|||+|++.+|.+.|.-....+
T Consensus       261 ~giran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        261 KGGDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             cCCEEEEEecCcccchhhhcCC
Confidence            9999999999999998776654

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=8.2e-19  Score=148.87  Aligned_cols=126  Identities=21%  Similarity=0.269  Sum_probs=103.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.+..++++|+++.++++++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987776666666532  35677889999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC
Q psy2854         132 QYPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ  182 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~  182 (384)
                      .+|++|++|||||+.... ++.+.++++ ++  .+|+.+++..++.+.+++.
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~  138 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFM  138 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHH
Confidence            999999999999986644 343434444 44  6677777888888887764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=3e-18  Score=162.88  Aligned_cols=169  Identities=19%  Similarity=0.125  Sum_probs=124.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHH--hcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKE--VQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~--~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +.++|+++||||+|+||.+++++|+++|++|++++|+.+.. ....+.+...  ..+.++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            56789999999999999999999999999999998875431 1122222111  01245888999999999999888765


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                           .+|+|||+||......    ..+..+..+++|+.|+.++++++.+...      ++|++||...+.....  .+.
T Consensus        83 -----~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~--~~~  151 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP--PQS  151 (340)
T ss_pred             -----CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC--CCC
Confidence                 5899999999743321    2344567789999999999999998874      6788887755433221  222


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHh
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKY  236 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~  236 (384)
                      +....    .+...|+.||.+.+.++++++.++
T Consensus       152 E~~~~----~p~~~Y~~sK~~~e~~~~~~~~~~  180 (340)
T PLN02653        152 ETTPF----HPRSPYAVAKVAAHWYTVNYREAY  180 (340)
T ss_pred             CCCCC----CCCChhHHHHHHHHHHHHHHHHHc
Confidence            22221    255689999999999999998876

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1.8e-17  Score=162.23  Aligned_cols=197  Identities=14%  Similarity=0.053  Sum_probs=139.5

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH----------------HHHHHHHHHHhcCCcEEEEE
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG----------------QEALEKLKKEVQDGQIVLME  113 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~  113 (384)
                      ....+++|+++||||+|+||++++++|+++|++|++++|...+.                .+..+.+... .+.++.++.
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~  119 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYV  119 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEE
Confidence            33567899999999999999999999999999999987532110                0111111111 134688999


Q ss_pred             eecCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcc
Q psy2854         114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSL  191 (384)
Q Consensus       114 ~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~  191 (384)
                      +|++|.+++++++++.     ++|++||+|+... .+....++++++..+++|+.|+.++++++...-  .++|++||..
T Consensus       120 ~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~  193 (442)
T PLN02572        120 GDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG  193 (442)
T ss_pred             CCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce
Confidence            9999999998888764     6899999997632 333334556677889999999999999998764  2789999987


Q ss_pred             cccCCcC-c--CCCCc-----CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         192 MDRGTID-F--DNLNG-----EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       192 ~~~~~~~-~--~~~~~-----~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+..... .  ..+..     +.....+..+...|+.||.+.+.+++.++..   .|+++..++|+.+..|..
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            6543210 0  00100     0000011224567999999999998887765   489999999999988864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=1.3e-17  Score=157.34  Aligned_cols=188  Identities=18%  Similarity=0.124  Sum_probs=134.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      -.||+++||||+|+||.+++++|+++|++|+++.|+.++.+... ++... ....++.++.+|++|+++++++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTE-HLLALDGAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHH-HHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence            35789999999999999999999999999999999876544322 22111 112468889999999998887765     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCccccc-CCcCc---CCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDR-GTIDF---DNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~-~~~~~---~~~~~~~  206 (384)
                        .+|++||+||.....     ..+..++.+++|+.|+.++++++...  .+++|++||.+... +.+..   ..+++..
T Consensus        77 --~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~  149 (322)
T PLN02986         77 --GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETF  149 (322)
T ss_pred             --CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCccc
Confidence              489999999973221     11223567899999999999998764  45899999987542 22111   1112211


Q ss_pred             Cc-cc-CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GF-VQ-KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~-~~-~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .. +. ...+...|+.||.+.+.+++.+.++.   |+++++++|+.+.+|...
T Consensus       150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             CCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCC
Confidence            00 00 00123579999999999988887764   899999999999998754

>PLN02650 dihydroflavonol-4-reductase

Probab=99.78  E-value=1.5e-17  Score=158.72  Aligned_cols=188  Identities=14%  Similarity=0.042  Sum_probs=134.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ..|+++||||+|.||.+++++|+++|++|++++|+.+................++.++.+|++|.++++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4578999999999999999999999999999999865544332211110001357889999999988887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCC-CCcCcC-cc-
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDN-LNGEKG-FV-  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~-~~~~~~-~~-  209 (384)
                      .+|++||+|+....   .  ..+..+..+++|+.|+.++++++.+..  +++|++||.....+...... +.+... .. 
T Consensus        77 ~~d~ViH~A~~~~~---~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~  151 (351)
T PLN02650         77 GCTGVFHVATPMDF---E--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLD  151 (351)
T ss_pred             CCCEEEEeCCCCCC---C--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchh
Confidence            47999999986321   1  112235678999999999999998865  48999999855443221111 121110 00 


Q ss_pred             ---cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 ---QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ---~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         ....+...|+.||.+.+.+++.++.+   +|++++.++|+.+.+|...
T Consensus       152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~  199 (351)
T PLN02650        152 FCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFIS  199 (351)
T ss_pred             hhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCC
Confidence               00112347999999999999988876   4899999999999998754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.77  E-value=3.9e-17  Score=156.02  Aligned_cols=191  Identities=17%  Similarity=0.079  Sum_probs=137.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      -.+++++||||+|+||.+++++|+++|++|++++|+.++.+....++.   ...++.++.+|++|.+++.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK---EGDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc---cCCeEEEEECCCCCHHHHHHHHc------
Confidence            457899999999999999999999999999999998655444333332   13568889999999998877664      


Q ss_pred             CCccEEEECCCCCCCCC-CCCCChhhH--HHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcC---c-CCCCc
Q psy2854         134 PKIHVLINNAGVSVPIK-EKLTTKEGY--EVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTID---F-DNLNG  204 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~-~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~---~-~~~~~  204 (384)
                       .+|++||+||...... ....+++.+  ..++++|+.|+.++++++.+..  +++|++||.+.+...+.   . ..+++
T Consensus        79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E  157 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDE  157 (353)
T ss_pred             -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCc
Confidence             4899999999754322 112233333  4567888899999999998764  48999999876643221   0 11222


Q ss_pred             Cc-Ccc----cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EK-GFV----QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~-~~~----~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .. ...    ...++...|+.||.+.+.+++.+++++   |+++.+++|+.+..|...
T Consensus       158 ~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        158 TCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             ccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcC
Confidence            21 000    011133479999999999999887764   899999999999998654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.76  E-value=3.2e-17  Score=155.63  Aligned_cols=189  Identities=12%  Similarity=0.037  Sum_probs=134.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++++++||||+|+||++++++|+++|++|++++|+.+...... .+.......++.++.+|++|.+++.++++    
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   79 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIA----   79 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHh----
Confidence            3567899999999999999999999999999998888865433221 11111011357889999999988877654    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcC---cCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTID---FDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~---~~~~~~~~  206 (384)
                         ++|++||+|+...   ..  ..+..+..+++|+.++.++++++.+.  .+++|++||.+.+.....   -..+.+..
T Consensus        80 ---~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~  151 (338)
T PLN00198         80 ---GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKN  151 (338)
T ss_pred             ---cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceecccc
Confidence               5899999998521   11  12334557899999999999998875  358999999876543210   00111110


Q ss_pred             -C----cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 -G----FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 -~----~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                       .    .....++...|+.||.+.+.+++.++.+   .|+++..++|+.+..|..
T Consensus       152 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        152 WTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             CCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCc
Confidence             0    0011124567999999999999988776   389999999999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=99.76  E-value=4.6e-17  Score=154.71  Aligned_cols=184  Identities=18%  Similarity=0.117  Sum_probs=135.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA-LEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.++.... ..++..  ...++.++.+|++|.+++.++++    
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID----   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh----
Confidence            35688999999999999999999999999999999986543221 222211  12357889999999998887765    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCc---CCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDF---DNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~---~~~~~~~~  207 (384)
                         ++|++||+||...         ++.+..+++|+.|+.++++++.+.. +++|++||..+..+.+..   ..+++...
T Consensus        81 ---~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~  148 (342)
T PLN02214         81 ---GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCW  148 (342)
T ss_pred             ---cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccC
Confidence               5899999999631         2356789999999999999998764 489999997655432211   11222210


Q ss_pred             -c-ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 -F-VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 -~-~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                       . .....+...|+.||.+.+.+++.++.+.   |+++..++|+.+..|...
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence             0 0011144579999999999998887764   899999999999988643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.76  E-value=4.8e-17  Score=151.57  Aligned_cols=185  Identities=12%  Similarity=0.027  Sum_probs=129.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG--QEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++|+++||||+|+||++++++|+++|++|+++.|+.++.  .+...++..  .+.++.++++|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC--EEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc--CCCceEEEEecCCCHHHHHHHHc-----
Confidence            468999999999999999999999999999999864321  122222211  12468889999999988865543     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCC-c---CcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGT-I---DFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~-~---~~~~~~~~~  206 (384)
                        ..|.++|.++....      ..+.++.++++|+.|++++++++.+.+  ++||++||..+.... .   ....+++..
T Consensus        78 --~~d~v~~~~~~~~~------~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~  149 (297)
T PLN02583         78 --GCSGLFCCFDPPSD------YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERS  149 (297)
T ss_pred             --CCCEEEEeCccCCc------ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCccc
Confidence              57888887654211      112467899999999999999999864  589999998765321 1   111122211


Q ss_pred             Ccc-c-CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFV-Q-KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~-~-~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ... . .......|+.||...+.++..++++   .|+++++++|+.|.+|...
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             CCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCC
Confidence            000 0 0001126999999999998887765   3899999999999988653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.76  E-value=7.4e-17  Score=153.96  Aligned_cols=185  Identities=17%  Similarity=0.158  Sum_probs=133.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++|+++||||+|+||.+++++|+++|++|++++|......+..+.+....  ...++.++.+|++|++++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            4678999999999999999999999999999999876433333222332221  1246788999999999998887652 


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                          ++|++||+||.....    .+.++.+..+++|+.++.++++++...- +++|++||...+ +......+.+.... 
T Consensus        81 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vy-g~~~~~~~~E~~~~-  150 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVY-GQPEEVPCTEEFPL-  150 (352)
T ss_pred             ----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHh-CCCCCCCCCCCCCC-
Confidence                799999999974321    1335667899999999999999887643 579999986544 32221223333222 


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                         .+...|+.||.+.+.+++.++.+  ..++++..++|+.+..
T Consensus       151 ---~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G  189 (352)
T PLN02240        151 ---SATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVG  189 (352)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCC
Confidence               14568999999999999988765  2467888888765544

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=5.3e-17  Score=154.46  Aligned_cols=166  Identities=17%  Similarity=0.108  Sum_probs=119.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKEV---QDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.. .+..+.+.+..   .+.++.++++|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            5899999999999999999999999999999976421 11122221110   1245888999999999998888764   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                        ++|++||+|+......    ..+.-...+++|+.|+.++++++.+. ++   ++|++||...+.... ...+.+....
T Consensus        78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~-~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQ-EIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCC-CCCCCCCCCC
Confidence              5899999999754321    22233567789999999999999875 32   688888886554322 1223333222


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHh
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKY  236 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~  236 (384)
                          .+.+.|+.||.+.+.+++.++.++
T Consensus       151 ----~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       151 ----YPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHh
Confidence                255689999999999999998875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.76  E-value=3.6e-17  Score=156.31  Aligned_cols=182  Identities=13%  Similarity=0.105  Sum_probs=129.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEE-EEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVV-LGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+++||||+|+||++++++|.++|++++ +.+|.... .. ...+.......++.++.+|++|.+++++++++     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence            5799999999999999999999998755 44443221 11 11111111124677889999999998888765     26


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh----------cCcEEEEcCcccccCCcC-cCCCCc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER----------IQKVVIVGSSLMDRGTID-FDNLNG  204 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~----------l~~iv~vsS~~~~~~~~~-~~~~~~  204 (384)
                      +|++||+||....    ..+.++++..+++|+.++.++++++.+.          .+++|++||.+.+..... -..+.+
T Consensus        75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            9999999997432    2244567889999999999999999874          237888988765432111 111222


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ....    .+.+.|+.||.+.+.+++.+++++   ++++..++|+.+..|..
T Consensus       151 ~~~~----~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        151 TTPY----APSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYH  195 (355)
T ss_pred             CCCC----CCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCC
Confidence            2211    145689999999999999988775   78899999999988753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=1.9e-16  Score=148.51  Aligned_cols=180  Identities=13%  Similarity=0.112  Sum_probs=130.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLK--ATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +++||||+|+||.+++++|++.|  .+|++.+|... ...+..+.+.   ...++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  78888776421 1112222221   1246788899999999998887653     


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ++|++||+||.....    .+.+..+..+++|+.++..+++++.+.+.  ++|++||...+..........+....    
T Consensus        73 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~----  144 (317)
T TIGR01181        73 QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL----  144 (317)
T ss_pred             CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC----
Confidence            589999999974321    23456677899999999999999988643  78999987654432211112222111    


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+...|+.+|.+.+.+++.++.+.   ++++.+++|+.+..+..
T Consensus       145 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~  185 (317)
T TIGR01181       145 APSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQ  185 (317)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCC
Confidence            144579999999999999987764   79999999999987753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=2.2e-16  Score=148.82  Aligned_cols=187  Identities=18%  Similarity=0.074  Sum_probs=131.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..... ..+.... ...++.++++|++|++++.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            468999999999999999999999999999999986543322 2221111 12468889999999988777664      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccc-c-CCcC--cCCCCcCcC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMD-R-GTID--FDNLNGEKG  207 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~-~-~~~~--~~~~~~~~~  207 (384)
                       ++|++||+|+.....     ..+..+..+++|+.|+.++++++...  .+++|++||.++. . +.+.  -..+++...
T Consensus        76 -~~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~  149 (322)
T PLN02662         76 -GCEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWF  149 (322)
T ss_pred             -CCCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccC
Confidence             579999999864211     11122468899999999999998765  3589999997642 2 2111  011222211


Q ss_pred             ccc--CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQ--KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~--~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ...  .......|+.||.+.+.+++.+.++   .|++++.++|+.+.+|...
T Consensus       150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             CChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCC
Confidence            100  0001247999999999988887665   3899999999999998754

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.72  E-value=4.3e-16  Score=148.43  Aligned_cols=185  Identities=15%  Similarity=0.087  Sum_probs=133.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV---QDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++|+++||||+|-||.+++++|.++|++|++++|................   ...++.++.+|++|.+++.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            3567899999999999999999999999999999986543333222222111   11357889999999887776654  


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                           .+|++||.|+......    ..++....+++|+.|+.++++.+... .+++|++||...+...... ...++...
T Consensus        90 -----~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~-~~~e~~~~  159 (348)
T PRK15181         90 -----NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDL-PKIEERIG  159 (348)
T ss_pred             -----CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCC-CCCCCCCC
Confidence                 4899999999743221    22334457899999999999988766 3589999988655432211 11121111


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                          .+...|+.||.+.+.+++.++.+   .|+++..++|+.+..|..
T Consensus       160 ----~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~  200 (348)
T PRK15181        160 ----RPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQ  200 (348)
T ss_pred             ----CCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCC
Confidence                14457999999999998887665   389999999999988764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.70  E-value=6.7e-16  Score=148.31  Aligned_cols=172  Identities=15%  Similarity=0.150  Sum_probs=146.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++||+++||||+|.||.++++++++.+. ++++.+|++-+......++...++..++.++-+|+.|.+.++++++..   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            6899999999999999999999999987 489999999888888888888777788999999999999999888754   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                        ++|+++|.|+.-+. |..+   ....+.+.+|++|+.++.+++...- +++|.+|+--+..                 
T Consensus       325 --kvd~VfHAAA~KHV-Pl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~-----------------  381 (588)
T COG1086         325 --KVDIVFHAAALKHV-PLVE---YNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVN-----------------  381 (588)
T ss_pred             --CCceEEEhhhhccC-cchh---cCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccC-----------------
Confidence              69999999998443 3322   3445578899999999999998875 4899999876654                 


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                        +...|++||...+.++.+++.+....+-++.+|+-|.|-.
T Consensus       382 --PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         382 --PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             --CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence              4458999999999999999987766678999999998854

>PLN02686 cinnamoyl-CoA reductase

Probab=99.70  E-value=8.9e-16  Score=147.16  Aligned_cols=191  Identities=14%  Similarity=0.079  Sum_probs=132.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV----QDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      .+.++|+++||||+|+||.+++++|+++|++|+++.|+.++.+.. +++....    ....+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            357899999999999999999999999999999888886544332 2221110    01257889999999998888775


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCccc-ccCC--c-Cc-C
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLM-DRGT--I-DF-D  200 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~-~~~~--~-~~-~  200 (384)
                             .+|.++|.|+.........    ..+...++|+.++.++++++...  .+++|++||..+ ..+.  + .. .
T Consensus       128 -------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~  196 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPP  196 (367)
T ss_pred             -------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCc
Confidence                   3688999988743322111    11234678999999999998753  568999999642 2211  1 10 0


Q ss_pred             CCCcCcC--cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         201 NLNGEKG--FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .+++...  ......+...|+.||.+.+.+++.++.+   .|+++++++|+.+.+|...
T Consensus       197 ~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~  252 (367)
T PLN02686        197 VIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFF  252 (367)
T ss_pred             ccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCC
Confidence            1111110  0011123457999999999999888776   4899999999999999643

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1.1e-15  Score=135.89  Aligned_cols=168  Identities=20%  Similarity=0.126  Sum_probs=135.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      +++|||||+|-||.+++.+|++.|++|++.+.-.....+.+...       ...+++.|+.|.+.+++++++.     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            36999999999999999999999999999988655444444322       1578999999999888888764     89


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      |.+||.||....+.    +.+.-.+.++-|+.|+..|++++...-.+-+++||+++..|.+...++.++....    +..
T Consensus        69 daViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~----p~N  140 (329)
T COG1087          69 DAVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLA----PIN  140 (329)
T ss_pred             CEEEECccccccch----hhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCC----CCC
Confidence            99999999854433    6666777899999999999999998887777778888888888777777765443    566


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVC  247 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~  247 (384)
                      .|+.||.+.+.+.+.+++..   +.++.+++
T Consensus       141 PYG~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence            79999999999999988875   45555554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.69  E-value=1.2e-15  Score=145.56  Aligned_cols=179  Identities=13%  Similarity=0.098  Sum_probs=126.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKAT-VVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++||||+|+||.+++++|+++|.+ |+.+++... ...+   .+....++.++.++.+|++|.+++++++++.     +
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLE---SLADVSDSERYVFEHADICDRAELDRIFAQH-----Q   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHH---HHHhcccCCceEEEEecCCCHHHHHHHHHhc-----C
Confidence            5899999999999999999999986 444444321 1111   1111111346778999999999998888752     7


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----------CcEEEEcCcccccCCcCc------
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----------QKVVIVGSSLMDRGTIDF------  199 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----------~~iv~vsS~~~~~~~~~~------  199 (384)
                      +|++||+||......    +.+..+..+++|+.|+.++++++.+.+          +++|++||...+.....-      
T Consensus        74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            999999999743211    223446789999999999999998763          378999887655321100      


Q ss_pred             ---CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         200 ---DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       200 ---~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                         ..+.+....    .+...|+.||.+.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       150 ~~~~~~~E~~~~----~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        150 EELPLFTETTAY----APSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY  201 (352)
T ss_pred             ccCCCccccCCC----CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence               011122111    245689999999999999988775   7788889999888775

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=2.7e-15  Score=132.79  Aligned_cols=181  Identities=13%  Similarity=0.094  Sum_probs=135.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKAT--VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +.+|||||+|.||.++++.+.++...  |+.++.-.  -....+.+.......+..+++.|++|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT--YAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT--YAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc--ccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            46899999999999999999988653  56554321  1111223333333568999999999999888888754     


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcC-CCCcCcCcccC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFD-NLNGEKGFVQK  211 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~-~~~~~~~~~~~  211 (384)
                      .+|++||-|+-.+..    -+.++-+.-+++|++|++.+++++..+..  |.+.||+-..++....-+ .+.+..++.  
T Consensus        74 ~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~--  147 (340)
T COG1088          74 QPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN--  147 (340)
T ss_pred             CCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC--
Confidence            799999999875532    24455556789999999999999999985  899999887665443221 233444444  


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                        +.+.|+||||+-..|++++.+.+   |+.++..++.--..|-
T Consensus       148 --PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPy  186 (340)
T COG1088         148 --PSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPY  186 (340)
T ss_pred             --CCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCC
Confidence              77889999999999999999986   8999999887666654

>KOG1502|consensus

Probab=99.67  E-value=2.9e-15  Score=136.67  Aligned_cols=187  Identities=19%  Similarity=0.120  Sum_probs=137.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE--ALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++|+||||||.||..++++|+++|++|..+.|++++.+.  .+.++...  ..+...+..|++|+++..++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            67899999999999999999999999999999999877333  23333321  3468899999999999998886     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCC-cCcCC--CCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGT-IDFDN--LNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~-~~~~~--~~~~~~  207 (384)
                        +.|+++|.|........   +  .-.+.++.++.|+.++++++...-  +|||+.||.++.... +...+  .-.+..
T Consensus        78 --gcdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             --CCCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCccccccc
Confidence              58999999976432211   1  123689999999999999998776  699999999988765 22111  111111


Q ss_pred             cccCC---CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKG---HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~---~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +.+.-   .....|+.||...+.-+..++.|   .|+...+|+||.|-.|....
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCccc
Confidence            11000   01135888888766666666665   37999999999999998876

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.67  E-value=3.3e-16  Score=141.61  Aligned_cols=167  Identities=14%  Similarity=0.111  Sum_probs=123.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEE----EEEeecCCHHHHHHHHHHHHHhC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIV----LMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |+||||+|.||.+++++|++.+. ++++.+|++.++-+...++.+..++.++.    .+.+|+.|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            68999999999999999999985 69999999888888888886655444443    4578999999888887654    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                       ++|+++|.|+.-+....+    +...+.+++|+.|+.++++++..+- +++|++||--+..                  
T Consensus        77 -~pdiVfHaAA~KhVpl~E----~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~------------------  133 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLME----DNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN------------------  133 (293)
T ss_dssp             -T-SEEEE------HHHHC----CCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS------------------
T ss_pred             -CCCEEEEChhcCCCChHH----hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC------------------
Confidence             799999999984433222    2345689999999999999999874 4899999876544                  


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                       +.+.|++||...+.+..+.+....+.+.++.+|+-|.|-.
T Consensus       134 -PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlg  173 (293)
T PF02719_consen  134 -PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLG  173 (293)
T ss_dssp             ---SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred             -CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence             4468999999999999999888777789999999998753

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.66  E-value=7e-15  Score=139.53  Aligned_cols=181  Identities=14%  Similarity=0.076  Sum_probs=127.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|...........+.+ ..+.++.++.+|++|.+++.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            589999999999999999999999999987654333332222222 1234577889999999988887653     3699


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++||+||......    ..+.....+++|+.++.++++++...- +++|++||...+... ....+++....   ..+..
T Consensus        76 ~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~-~~~~~~E~~~~---~~p~~  147 (338)
T PRK10675         76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQ-PKIPYVESFPT---GTPQS  147 (338)
T ss_pred             EEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCC-CCCccccccCC---CCCCC
Confidence            9999999753322    223345678999999999999887653 479998887544322 11122222211   01456


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .|+.||.+.+.+++.++++.  .++++..++|+.+..+
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~  183 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCC
Confidence            89999999999999987653  3678888887766554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.66  E-value=3.9e-15  Score=140.50  Aligned_cols=175  Identities=18%  Similarity=0.073  Sum_probs=129.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||+|+||.+++++|+++|++|++++|+.+....    +    ....+.++.+|++|.++++++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----L----EGLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----c----ccCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            368999999999999999999999999999998654321    1    12357889999999998877664       57


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++||+|+....      ..++.+..+++|+.++.++++++.... +++|++||...+........+.+..... +....
T Consensus        66 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~-~~~~~  138 (328)
T TIGR03466        66 RALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSS-LDDMI  138 (328)
T ss_pred             CEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCC-ccccc
Confidence            999999985321      223456788999999999999988764 4899999987654322111222221111 11123


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ..|+.+|.+.+.+++.++.+   .|+++..++|+.+..+..
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~  176 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRD  176 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCC
Confidence            47999999999999988765   389999999999877653

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.65  E-value=4.2e-15  Score=136.81  Aligned_cols=182  Identities=15%  Similarity=0.086  Sum_probs=130.5

Q ss_pred             EEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          60 IITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        60 lITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      |||||+|.||.+++++|+++|  .+|.+.++......  ...+..   .....++++|++|++++.++++       +.|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  78888887654322  111111   1233389999999999998876       679


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCc---CcCCCCcCcCcccCCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTI---DFDNLNGEKGFVQKGH  213 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~---~~~~~~~~~~~~~~~~  213 (384)
                      ++||.|+......     ....++++++|+.|+-++++++...- +++|++||........   ++.+.++...+.  ..
T Consensus        69 ~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~--~~  141 (280)
T PF01073_consen   69 VVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP--SS  141 (280)
T ss_pred             eEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccc--cc
Confidence            9999999743322     34457799999999999999998753 4899999998776522   222222333332  22


Q ss_pred             ChhhhhhcHHHHHHHHHHHHH-HhC-CCCcEEEEEecCcccCCccccCc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYL-KYA-DKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~-e~~-~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      ....|+.||+..+.++..... ++. ...++..+++|..|..|.-....
T Consensus       142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~  190 (280)
T PF01073_consen  142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV  190 (280)
T ss_pred             ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc
Confidence            556899999999988876554 121 12599999999999988654443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.65  E-value=7.1e-15  Score=138.52  Aligned_cols=179  Identities=17%  Similarity=0.123  Sum_probs=128.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++.+|......+...++.+   ..++..+.+|+++.++++++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            378999999999999999999999999887643332222222211   12577889999999999887763     4799


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++|||||.....+    +.+...+.+++|+.++..+++++...- +++|++||...+. ......+.+....    .+..
T Consensus        73 ~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g-~~~~~~~~e~~~~----~~~~  143 (328)
T TIGR01179        73 AVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYG-EPSSIPISEDSPL----GPIN  143 (328)
T ss_pred             EEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcC-CCCCCCccccCCC----CCCC
Confidence            9999999753322    233445678999999999999887653 4788888865443 2211122222211    1446


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .|+.+|++.+.+.+.++.+  ..++++..++|+.+..+.
T Consensus       144 ~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       144 PYGRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGAD  180 (328)
T ss_pred             chHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCCC
Confidence            7999999999999998765  247999999999888764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.64  E-value=1.4e-14  Score=131.69  Aligned_cols=170  Identities=17%  Similarity=0.293  Sum_probs=112.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF-DSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~~  131 (384)
                      ...+++++||||+|+||++++++|+++|++|++..|+.++..+..    ..  +.++.++++|++|. +++   .+.+. 
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~~~l---~~~~~-   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGSDKL---VEAIG-   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCHHHH---HHHhh-
Confidence            456789999999999999999999999999999999876543221    11  23688899999983 322   22221 


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                        .++|++|+|+|......    .    ...+++|..++.++++++... .+++|++||...+......         . 
T Consensus        84 --~~~d~vi~~~g~~~~~~----~----~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~---------~-  143 (251)
T PLN00141         84 --DDSDAVICATGFRRSFD----P----FAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQ---------I-  143 (251)
T ss_pred             --cCCCEEEECCCCCcCCC----C----CCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCccc---------c-
Confidence              26999999999742211    1    113578999999999998764 3489999998643221100         0 


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLK--YADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e--~~~~gI~v~~v~PG~v~T~~  255 (384)
                         ....|...|.....+...+..|  +...|++++.|+||++.++.
T Consensus       144 ---~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        144 ---LNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             ---cCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence               1223555554333322222222  45679999999999988764

>PLN02427 UDP-apiose/xylose synthase

Probab=99.63  E-value=6.6e-15  Score=142.33  Aligned_cols=188  Identities=15%  Similarity=0.092  Sum_probs=127.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +.+.++|+||||+|.||++++++|+++ |++|++++|+.++........... ...++.++.+|++|.++++++++    
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh----
Confidence            456678999999999999999999998 589999998765433221110000 02368899999999988877664    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcC----
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKG----  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~----  207 (384)
                         .+|++||+|+...+.....    +-...+..|+.+..++++++...-+++|++||...+..... ..+.....    
T Consensus        86 ---~~d~ViHlAa~~~~~~~~~----~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~-~~~~e~~p~~~~  157 (386)
T PLN02427         86 ---MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG-SFLPKDHPLRQD  157 (386)
T ss_pred             ---cCCEEEEcccccChhhhhh----ChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcC-CCCCcccccccc
Confidence               4799999999754322111    11234567999999999988766678999999765432210 00110000    


Q ss_pred             --------------cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 --------------FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 --------------~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                                    +.....+...|+.||.+.+.++..++..   .|+++..++|+.+..|..
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~  217 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRM  217 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCC
Confidence                          0000012346999999999998876544   489999999999998753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.60  E-value=5e-14  Score=126.41  Aligned_cols=173  Identities=20%  Similarity=0.168  Sum_probs=134.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      |+||||+|-||.+++++|.++|..|+...|+.........+       .++.++.+|++|.++++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            68999999999999999999999988888876543332221       26889999999999999998876     7999


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      +||+||.....    .+.+.....++.|+.+...+++++...-. ++|++||...+... .-..+.+.....    +...
T Consensus        69 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~-~~~~~~e~~~~~----~~~~  139 (236)
T PF01370_consen   69 VIHLAAFSSNP----ESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP-DGEPIDEDSPIN----PLSP  139 (236)
T ss_dssp             EEEEBSSSSHH----HHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS-SSSSBETTSGCC----HSSH
T ss_pred             EEEeecccccc----cccccccccccccccccccccccccccccccccccccccccccc-cccccccccccc----cccc
Confidence            99999974311    12356677889999999999999987765 89999996544333 222223332221    4556


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |+.+|...+.+.+.+..+.   ++++..++|+.+..+.
T Consensus       140 Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  140 YGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccc---cccccccccccccccc
Confidence            9999999999999988875   8999999999999888

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.58  E-value=5.3e-14  Score=144.82  Aligned_cols=186  Identities=12%  Similarity=0.057  Sum_probs=130.9

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHH
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDS-IKNFA  126 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~-v~~~~  126 (384)
                      |...-.++++|+||||+|.||.+++++|+++ |++|+.++|+......    .   ....++.++.+|++|.++ +++++
T Consensus       308 ~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~---~~~~~~~~~~gDl~d~~~~l~~~l  380 (660)
T PRK08125        308 PACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----F---LGHPRFHFVEGDISIHSEWIEYHI  380 (660)
T ss_pred             chhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----h---cCCCceEEEeccccCcHHHHHHHh
Confidence            3333456789999999999999999999986 7999999997543221    1   112468889999998654 33333


Q ss_pred             HHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCc
Q psy2854         127 KNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       127 ~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                             .++|++||.|+...+....    +..+..+++|+.++.++++++...-+++|++||...+... .-..+.+..
T Consensus       381 -------~~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~-~~~~~~E~~  448 (660)
T PRK08125        381 -------KKCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMC-TDKYFDEDT  448 (660)
T ss_pred             -------cCCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCC-CCCCcCccc
Confidence                   2589999999975432211    2234578899999999999998876789999998654321 111222222


Q ss_pred             Ccc--cC-CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 GFV--QK-GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ~~~--~~-~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...  .+ ..+...|+.||.+.+.+++.+++++   |+++..++|+.+..|..
T Consensus       449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRL  498 (660)
T ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCc
Confidence            110  01 1134579999999999999887664   89999999999988753

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.58  E-value=7.3e-14  Score=133.11  Aligned_cols=178  Identities=15%  Similarity=0.100  Sum_probs=125.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA-SFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~i~~~~g  134 (384)
                      ++++||||+|.||.+++++|+++ |++|++++|+.++..    .+   .+...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DL---VNHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hh---ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            46999999999999999999986 699999988653222    11   12346888999998 6665554432       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcc---cC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV---QK  211 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~---~~  211 (384)
                      ++|++||+|+...+...    .++.+..+++|+.++.++++++...-+++|++||...+..... ..+.++....   ..
T Consensus        68 ~~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~-~~~~ee~~~~~~~~~  142 (347)
T PRK11908         68 KCDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPD-EEFDPEASPLVYGPI  142 (347)
T ss_pred             CCCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCC-cCcCccccccccCcC
Confidence            58999999997543221    2233567899999999999998876678999999865532211 1122221100   00


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ..+...|+.||.+.+...+.++.+   .|+++..++|+.+..|..
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        143 NKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGL  184 (347)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCc
Confidence            113447999999999998887765   488999999998887753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.58  E-value=4.8e-14  Score=132.06  Aligned_cols=172  Identities=17%  Similarity=0.157  Sum_probs=120.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH--hCCCc
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK--QYPKI  136 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~--~~g~i  136 (384)
                      ++||||+|.||++++++|+++|++++++.|+....... .           ....+|++|..+.+.+++++.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999776666654322110 0           1134677776666666665543  34579


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      |++||+||......   .+.   +..++.|+.++.++++++...-.++|++||...+..... ....+...    ..+..
T Consensus        70 d~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~-~~~~E~~~----~~p~~  138 (308)
T PRK11150         70 EAIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTD-DFIEEREY----EKPLN  138 (308)
T ss_pred             cEEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCC-CCCccCCC----CCCCC
Confidence            99999998643221   122   346899999999999999877668999998866543211 11222111    11456


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .|+.||.+.+.+++.++.+   .++++..++|+.+..+..
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~  175 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPRE  175 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCC
Confidence            7999999999998887655   379999999999988753

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.57  E-value=7e-14  Score=133.78  Aligned_cols=182  Identities=16%  Similarity=0.117  Sum_probs=120.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHH---HHHHHHHHHhc-----C-CcEEEEEeecCCHHH--HHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQ---EALEKLKKEVQ-----D-GQIVLMELNLASFDS--IKN  124 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~---~~~~~l~~~~~-----~-~~~~~~~~Dvs~~~~--v~~  124 (384)
                      +++||||+|+||++++++|+++|  ++|++..|+.+...   ...+.+.....     . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  78999999865321   11111211100     1 478899999986531  001


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCC
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ..+.+   ...+|++||||+....       ...++...++|+.++..+++.+..... +++++||......... ....
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~-------~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~-~~~~  149 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNW-------VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDL-STVT  149 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEecc-------CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCC-CCcc
Confidence            11122   1369999999997432       123456778999999999998877644 5999999876543211 1111


Q ss_pred             cCcCc-ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         204 GEKGF-VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       204 ~~~~~-~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      ..... .........|+.||.+.+.+.+.++.    .|++++.++||.+.++
T Consensus       150 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       150 EDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             ccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            11110 00011234799999999988876544    3899999999999876

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1371|consensus

Probab=99.57  E-value=9.6e-14  Score=124.88  Aligned_cols=170  Identities=18%  Similarity=0.157  Sum_probs=132.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +++||||||+|-||.+++.+|.++|+.|++++.-..........+++... +.++.+++.|++|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57999999999999999999999999999988755555555555554432 468999999999999999998876     


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      .+|.++|-|+....++    +.+...+.++.|+.|++.++..+..+-.+-++.||++...+.+...+++++.....   +
T Consensus        77 ~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~---p  149 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQ---P  149 (343)
T ss_pred             CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCC---C
Confidence            5999999999855443    44444778999999999999998877664444455556667776666666543321   5


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhC
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYA  237 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~  237 (384)
                      .+.|+.+|.+++...+.+..-+.
T Consensus       150 ~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  150 TNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCcchhhhHHHHHHHHhhhcccc
Confidence            67899999999999998887653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.56  E-value=2.2e-13  Score=133.21  Aligned_cols=179  Identities=13%  Similarity=0.079  Sum_probs=124.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++++|+||||+|.||.+++++|.++|++|++++|......+.   +.......++.++..|+.+..     +       .
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l-------~  182 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L-------L  182 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h-------c
Confidence            568999999999999999999999999999988754322211   111122346777888987653     1       2


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCc-CcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEK-GFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~-~~~~~~~  213 (384)
                      .+|++||.|+...+...    .++.+..+++|+.++.++++++...-.++|++||...+..... ....+.. ....+..
T Consensus       183 ~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~-~p~~E~~~~~~~P~~  257 (442)
T PLN02206        183 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ-HPQVETYWGNVNPIG  257 (442)
T ss_pred             CCCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCC-CCCCccccccCCCCC
Confidence            58999999987543221    1233568899999999999999876668999999876543211 1111110 1111222


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      +...|+.||.+.+.+++.+.++.   |+++..++|+.+..|..
T Consensus       258 ~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~  297 (442)
T PLN02206        258 VRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRM  297 (442)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCC
Confidence            35689999999999988876653   79999999998887753

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.56  E-value=9.5e-14  Score=134.00  Aligned_cols=162  Identities=15%  Similarity=0.064  Sum_probs=119.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE--ALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  ..++....  ..++.++++|++|+++++++++..  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence            567899999999999999999999999999999998754321  11122111  246788999999999999887753  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                       .+++|++|||+|.....     .    ...+++|+.+..++++++...- +++|++||.....                
T Consensus       134 -~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~----------------  187 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK----------------  187 (390)
T ss_pred             -CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC----------------
Confidence             12699999999852211     1    1245678889999999887653 4799999875431                


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                         +...|..+|...+...+.     ...|+++..++|+.+..
T Consensus       188 ---p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        188 ---PLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             ---cchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhc
Confidence               334588889888776543     24689999999987653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.55  E-value=1.9e-13  Score=141.29  Aligned_cols=184  Identities=16%  Similarity=0.092  Sum_probs=128.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++|+|+||||+|.||++++++|+++  |++|+..+|.... .. ...+.......++.++.+|++|.+.+..++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~-~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SN-LKNLNPSKSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-ch-hhhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence            45689999999999999999999998  6789888874211 11 11121111134688899999998877665432   


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcCCC--CcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFDNL--NGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~~~--~~~~~  207 (384)
                        .++|++||+|+......    ..++....+++|+.++..+++++...  .+++|++||...+.........  .+...
T Consensus        79 --~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~  152 (668)
T PLN02260         79 --EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQ  152 (668)
T ss_pred             --cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCC
Confidence              37999999999743221    22233457789999999999998765  4589999998655432110000  11111


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .    .+...|+.||.+.+.+.+.+..++   ++++.+++|+.+..+-
T Consensus       153 ~----~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~  193 (668)
T PLN02260        153 L----LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN  193 (668)
T ss_pred             C----CCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcC
Confidence            1    144579999999999999887664   7999999999998775

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.55  E-value=1.4e-13  Score=128.44  Aligned_cols=157  Identities=15%  Similarity=0.109  Sum_probs=115.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|.||.+++++|.++| +|+.++|...                   .+..|++|.++++++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888777521                   2357999999888877643     589


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+|+......    ..++-+..+++|+.++.++.+++...-.++|++||...+.+... .++.+...    ..+...
T Consensus        57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~-~p~~E~~~----~~P~~~  127 (299)
T PRK09987         57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGD-IPWQETDA----TAPLNV  127 (299)
T ss_pred             EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCC-CCcCCCCC----CCCCCH
Confidence            9999999754321    22233566789999999999999877678999988776543321 12222221    125568


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |+.||.+.+.+++.+..       +...++|+++..|-
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            99999999988765432       34788898888764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.54  E-value=1.9e-13  Score=126.63  Aligned_cols=153  Identities=19%  Similarity=0.226  Sum_probs=115.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      ++||||+|.||.+++++|.++|++|++++|+                       .+|+.+.++++++++..     ++|+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~   53 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDA   53 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence            7999999999999999999999999998874                       47999999988887653     6899


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAY  218 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  218 (384)
                      +||+||......    .....+..+++|+.++..+.+++...-.++|++||...+.+.. ...+.+....    .+...|
T Consensus        54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-~~~~~E~~~~----~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEG-KRPYREDDAT----NPLNVY  124 (287)
T ss_pred             EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCC-CCCCCCCCCC----CCcchh
Confidence            999999743211    2233456789999999999999876555899999976543321 1112222111    145679


Q ss_pred             hhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         219 CNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       219 ~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +.+|.+.+.+++.+       +.++..++|+.+..+.
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            99999998887654       4578999999998776

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.53  E-value=3.6e-13  Score=129.33  Aligned_cols=178  Identities=13%  Similarity=0.031  Sum_probs=124.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+++||||+|.||++++++|.++|++|++++|.....   ..   ..  .....++.+|++|.+++.++++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~~---~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---MS---ED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---cc---cc--cccceEEECCCCCHHHHHHHHh-------
Confidence            678999999999999999999999999999999864211   00   00  1124667899999887666543       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcC---CCCcCcCccc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFD---NLNGEKGFVQ  210 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~---~~~~~~~~~~  210 (384)
                      ++|++||.|+.........   ......+..|+.++.++++++...- +++|++||...+.......   .+.+....  
T Consensus        85 ~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~--  159 (370)
T PLN02695         85 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAW--  159 (370)
T ss_pred             CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCC--
Confidence            5799999998643222111   1223456789999999999887653 4899999976543221100   11111111  


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +..+...|+.+|.+.+.+++.++..   .|+++..++|+.+..|-
T Consensus       160 p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        160 PAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF  201 (370)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence            1125568999999999999887665   38999999999999875

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.52  E-value=3.5e-13  Score=126.32  Aligned_cols=177  Identities=18%  Similarity=0.080  Sum_probs=125.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++||||+|.||.+++++|.++|++|+.++|.........         ..+.++.+|+++.+...+..+..     . |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence            3999999999999999999999999999999765433222         25677899999985555444321     1 9


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHH-hcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIE-RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~-~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      .+||+|+......... +  ..+..+.+|+.++.++++++.. ..+++|+.||.....+...-..+.+..   .+..+..
T Consensus        67 ~vih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~---~~~~p~~  140 (314)
T COG0451          67 AVIHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL---GPPRPLN  140 (314)
T ss_pred             EEEEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc---CCCCCCC
Confidence            9999999854322211 1  3456889999999999999998 455888855545444331111223321   1111333


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .|+.||.+.+..+.....   ..|+.+..++|+.+..|....
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~  179 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKP  179 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCC
Confidence            799999999999998888   458999999999888776543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.51  E-value=9.2e-13  Score=128.62  Aligned_cols=179  Identities=13%  Similarity=0.097  Sum_probs=123.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +.++++||||+|.||.+++++|+++|++|++++|......+....+   ....++.++..|+.+..            ..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~------------~~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI------------LL  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc------------cc
Confidence            3468999999999999999999999999999988643222211111   11235777888886542            12


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCc-CcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEK-GFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~-~~~~~~~  213 (384)
                      ++|++||.|+........    .+-+..+++|+.++.++++++...-.++|++||...+..... ....+.. ....+..
T Consensus       184 ~~D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~-~p~~E~~~~~~~p~~  258 (436)
T PLN02166        184 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLE-HPQKETYWGNVNPIG  258 (436)
T ss_pred             CCCEEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCC-CCCCccccccCCCCC
Confidence            589999999874432211    223568899999999999999877668999988765543211 1122211 0011222


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      +...|+.||.+.+.+++.+.+.   .|+++..++|+.+..+..
T Consensus       259 p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~  298 (436)
T PLN02166        259 ERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRM  298 (436)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCC
Confidence            4567999999999999887665   379999999998888753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.51  E-value=6.8e-13  Score=124.46  Aligned_cols=173  Identities=14%  Similarity=0.049  Sum_probs=119.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          59 CIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      ++||||+|.||.+++++|.++|+ .|++++|.....  ...++.       ...+..|+++.+.++.+.+.   .++++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~~-------~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNLA-------DLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhhh-------heeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999998 688877654321  111111       12456788887766655442   346899


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+|+....      +.++.+..+++|+.++..+++.+...-.++|++||...+....  ..+.++...   ..+...
T Consensus        69 ~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~--~~~~e~~~~---~~p~~~  137 (314)
T TIGR02197        69 AIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE--AGFREGREL---ERPLNV  137 (314)
T ss_pred             EEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC--CCcccccCc---CCCCCH
Confidence            99999997321      2334567889999999999999987666899999976543221  112222111   114567


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |+.||.+.+.+++....+. ..++++..++|+.+..+.
T Consensus       138 Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       138 YGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             HHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence            9999999999987644332 235789999999888765

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=2.6e-12  Score=116.57  Aligned_cols=173  Identities=20%  Similarity=0.213  Sum_probs=101.2

Q ss_pred             EeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHH---------h---cCCcEEEEEeecCCHH------
Q psy2854          61 ITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKE---------V---QDGQIVLMELNLASFD------  120 (384)
Q Consensus        61 ITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~~Dvs~~~------  120 (384)
                      ||||||.||.++.++|++.+.  +|++..|..+. ++..+.+.+.         .   ...+++++..|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999976  89999997633 2222222111         0   1578999999999854      


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHH-hcCcEEEEcCcccccCCcCc
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIE-RIQKVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~-~l~~iv~vsS~~~~~~~~~~  199 (384)
                      +.+.+.+       .+|++||||+......       .++...++|+.|+..+++.+.. ..++++++|| +...+... 
T Consensus        80 ~~~~L~~-------~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~-  143 (249)
T PF07993_consen   80 DYQELAE-------EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRP-  143 (249)
T ss_dssp             HHHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-T-
T ss_pred             Hhhcccc-------ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCC-
Confidence            3333332       5899999998754321       3344778999999999999883 3348999999 32222211 


Q ss_pred             CCCC------cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         200 DNLN------GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       200 ~~~~------~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                      ..+.      ..............|..||...|.+.+..+.+.   |+.+..++||.+-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            1110      000011111234589999999999998887763   89999999998876

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.42  E-value=2.5e-12  Score=120.22  Aligned_cols=162  Identities=16%  Similarity=0.098  Sum_probs=115.3

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccEE
Q psy2854          60 IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVL  139 (384)
Q Consensus        60 lITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~l  139 (384)
                      +||||+|.||.+++++|.++|.+|+++.+.                      ..+|++|.++++++++..     ++|++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            599999999999999999999988765332                      148999999888876652     68999


Q ss_pred             EECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC-CChhh
Q psy2854         140 INNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG-HSNPA  217 (384)
Q Consensus       140 vnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  217 (384)
                      ||+|+.......   ..+..+..+++|+.++..+++++...- +++|++||...+.+. ....+++......+. +....
T Consensus        54 ih~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~-~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         54 ILAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKF-APQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             EEeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCC-CCCCCCHHHhccCCCCCCcch
Confidence            999997432111   112234568899999999999998764 479999997654322 112222221100011 12235


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |+.||.+.+.+.+.+.++.   ++++..++|+.+..+.
T Consensus       130 Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH  164 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            9999999999888877664   7999999999998875

>PLN02996 fatty acyl-CoA reductase

Probab=99.38  E-value=1.5e-11  Score=121.97  Aligned_cols=187  Identities=14%  Similarity=0.200  Sum_probs=122.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchh--HHHHH-HHH---------HHHhc-------CCcEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIR--GQEAL-EKL---------KKEVQ-------DGQIV  110 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~---~Vi~~~r~~~~--~~~~~-~~l---------~~~~~-------~~~~~  110 (384)
                      -++||+++||||||.||+.++++|++.+.   +|++..|..+.  ..+.. .++         .+..+       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            36799999999999999999999998643   58888886531  11111 111         11111       15789


Q ss_pred             EEEeecCCH-------HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--c
Q psy2854         111 LMELNLASF-------DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--I  181 (384)
Q Consensus       111 ~~~~Dvs~~-------~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l  181 (384)
                      ++..|++++       +.++++++       .+|++||+|+....       .+..+..+++|+.|+..+++++...  .
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~  153 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-------DERYDVALGINTLGALNVLNFAKKCVKV  153 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-------cCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999843       33344332       58999999997532       1245668899999999999988753  4


Q ss_pred             CcEEEEcCcccccCCcC---cCCCCcCc-----------------------------------------Cccc--CCCCh
Q psy2854         182 QKVVIVGSSLMDRGTID---FDNLNGEK-----------------------------------------GFVQ--KGHSN  215 (384)
Q Consensus       182 ~~iv~vsS~~~~~~~~~---~~~~~~~~-----------------------------------------~~~~--~~~~~  215 (384)
                      +++|++||...+.....   -..++...                                         +...  .....
T Consensus       154 k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (491)
T PLN02996        154 KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWP  233 (491)
T ss_pred             CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCC
Confidence            57899888776543210   00000000                                         0000  01122


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..|+.||++.+.+++..+     .|+++..++|+.|..+....
T Consensus       234 n~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p  271 (491)
T PLN02996        234 NTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEP  271 (491)
T ss_pred             CchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCC
Confidence            469999999999886542     38999999999998876433

>KOG1430|consensus

Probab=99.36  E-value=1.9e-11  Score=114.00  Aligned_cols=188  Identities=14%  Similarity=0.082  Sum_probs=137.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.+++||||+|.+|++++++|.++|  .+|.+.+..+....-..++...  ...++.++++|+.|..++.+.++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc-----
Confidence            46799999999999999999999998  6788888876422111111111  25688899999999888877654     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                        +. .+||+|....+..    -..+-+..+++|+.|+.++++.+...-. +.|++||.....+..+..+-++..+++  
T Consensus        76 --~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p--  146 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYP--  146 (361)
T ss_pred             --Cc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCc--
Confidence              45 6777766544332    2225667899999999999999988765 788999988777665544555555555  


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                      ......|+.||+-.+.+.+..+.   ..+....+++|-.|..|.-+..-+
T Consensus       147 ~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~  193 (361)
T KOG1430|consen  147 LKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLP  193 (361)
T ss_pred             cccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccH
Confidence            22446899999988887766543   346899999999999887655543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.36  E-value=7.8e-12  Score=115.70  Aligned_cols=153  Identities=20%  Similarity=0.207  Sum_probs=108.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|-||.+++++|.++|++|+.++|+                       .+|++|.+++.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            68999999999999999999999999988765                       58999999999998876     699


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+||+.....    .+++-+..+.+|+.++..+.+.+...-.++|++||...+.|.... ...+...    ..+...
T Consensus        54 ~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~-~y~E~d~----~~P~~~  124 (286)
T PF04321_consen   54 VVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGG-PYTEDDP----PNPLNV  124 (286)
T ss_dssp             EEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSS-SB-TTS--------SSH
T ss_pred             eEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCccc-ccccCCC----CCCCCH
Confidence            9999999853211    334556789999999999999999887899999998776554211 1122211    125679


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      |+.+|...+...+..   . +   +...++++++..+
T Consensus       125 YG~~K~~~E~~v~~~---~-~---~~~IlR~~~~~g~  154 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAA---C-P---NALILRTSWVYGP  154 (286)
T ss_dssp             HHHHHHHHHHHHHHH-----S---SEEEEEE-SEESS
T ss_pred             HHHHHHHHHHHHHHh---c-C---CEEEEecceeccc
Confidence            999999988877651   1 2   6788899998877

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.35  E-value=2.5e-11  Score=125.50  Aligned_cols=175  Identities=17%  Similarity=0.078  Sum_probs=118.1

Q ss_pred             EEEEeCCCCchhHHHHHHHH--HCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH--HHHHHHHHHhC
Q psy2854          58 VCIITGANSGIGYETAKELA--KLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSI--KNFAKNVMKQY  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~--~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v--~~~~~~i~~~~  133 (384)
                      +++||||+|.||++++++|+  ++|.+|++++|+...  ...+.+.......++.++.+|++|++..  ....+++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589999999996432  2222222222225688999999985310  1112222    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      .++|++||+||.....       ...+...++|+.++.++++++... .+++|++||...+.....  ...+.. .....
T Consensus        76 ~~~D~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~--~~~e~~-~~~~~  145 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG--VFREDD-FDEGQ  145 (657)
T ss_pred             cCCCEEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC--cccccc-chhhc
Confidence            4799999999974321       123456789999999999988765 458999998866532211  111111 01111


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .....|+.||...+.+.+.      ..|+++..++|+.+..+
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             CCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            1335699999999987753      24899999999999765

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.35  E-value=2.1e-11  Score=114.69  Aligned_cols=146  Identities=12%  Similarity=0.062  Sum_probs=106.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||||.||++++++|+++|++|.+.+|+.++..    .+.    ...+.++.+|++|++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLK----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            6999999999999999999999999999999864322    111    1357889999999998876654       589


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++||+++...         .+.....++|+.++.++.+++... .+++|++||..... .                 +..
T Consensus        67 ~Vi~~~~~~~---------~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-~-----------------~~~  119 (317)
T CHL00194         67 AIIDASTSRP---------SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-Y-----------------PYI  119 (317)
T ss_pred             EEEECCCCCC---------CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-c-----------------CCC
Confidence            9999876421         112235668899999999988765 35888888753211 0                 223


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY  252 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~  252 (384)
                      .|..+|...+.+.+       ..|+++..++|+.+.
T Consensus       120 ~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194        120 PLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             hHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence            57788887766543       348999999998543

>KOG1429|consensus

Probab=99.35  E-value=4.7e-11  Score=105.29  Aligned_cols=196  Identities=15%  Similarity=0.123  Sum_probs=144.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+..+++++||||+|.||.+++++|..+|..|++.+.-...-....+   .......+..+.-|+..+     ++.    
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~---~~~~~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLE---HWIGHPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcc---hhccCcceeEEEeechhH-----HHH----
Confidence            34677999999999999999999999999999998875433333222   222345667777787655     333    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                         .+|.++|-|....+..+..-+    .+++.+|+.++.+++..+.+..+|++..|++..+.-.-.........++..+
T Consensus        91 ---evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnp  163 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNP  163 (350)
T ss_pred             ---HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCc
Confidence               468889999886665443322    3478999999999999999888898888887766543333333444666667


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI  269 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~  269 (384)
                      ....++|...|.+.+.|+..+.++   .||.|...++--+..|...-.+.+....+..
T Consensus       164 igpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~  218 (350)
T KOG1429|consen  164 IGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIA  218 (350)
T ss_pred             CCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHH
Confidence            778899999999999999988776   4999999999988888776555554444333

>PLN02778 3,5-epimerase/4-reductase

Probab=99.32  E-value=4.9e-11  Score=111.14  Aligned_cols=143  Identities=16%  Similarity=0.015  Sum_probs=95.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .++++||||+|.||.+++++|.++|++|+...                          .|++|.+.+...++.     .+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~-----~~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDA-----VK   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHh-----cC
Confidence            36799999999999999999999999987421                          234455555444432     26


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcC-----cCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTID-----FDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~-----~~~~~~~~~~~~  210 (384)
                      +|++||+||....... +...++-...+++|+.++.++++++...-.+.+++||...+.....     ...+.++..   
T Consensus        58 ~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~---  133 (298)
T PLN02778         58 PTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDT---  133 (298)
T ss_pred             CCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCC---
Confidence            8999999998543211 1122345678999999999999999876546667776543322110     001222211   


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHH
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELY  233 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la  233 (384)
                      +.+....|+.||.+.+.+++.++
T Consensus       134 p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        134 PNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCchHHHHHHHHHHHHHhh
Confidence            11133579999999999988765

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=8.4e-11  Score=106.02  Aligned_cols=153  Identities=20%  Similarity=0.211  Sum_probs=117.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      ++|||++|-+|.++++.|. .+.+|+.++|..                       +|++|++.+.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 778999887752                       8999999999999877     8999


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAY  218 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  218 (384)
                      +||+|++.....    .+.+-+..+.+|..|+.++.+++...-.++|.+||-..+-|...- +..+.    +...+...|
T Consensus        54 VIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~-~Y~E~----D~~~P~nvY  124 (281)
T COG1091          54 VINAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGG-PYKET----DTPNPLNVY  124 (281)
T ss_pred             EEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCC-CCCCC----CCCCChhhh
Confidence            999999854322    344567789999999999999999988899999998776554311 01111    112367799


Q ss_pred             hhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         219 CNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       219 ~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      +.||.+-+..+++..       -+...++..++...-.
T Consensus       125 G~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g  155 (281)
T COG1091         125 GRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYG  155 (281)
T ss_pred             hHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCC
Confidence            999999988876543       3455566667666544

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.30  E-value=1.3e-10  Score=105.77  Aligned_cols=179  Identities=13%  Similarity=0.057  Sum_probs=137.8

Q ss_pred             CCEEEEeCC-CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGA-NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGa-s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .++|+|-|. +.-|++.+|..|-++|+-|++++.+.+..+.    ++++. ...+.....|..++.++...++++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~----ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKY----VESED-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHH----HHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468999996 7999999999999999999999988544332    22222 34577788888888888887777776554


Q ss_pred             --------------CccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEc-Ccc
Q psy2854         135 --------------KIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVG-SSL  191 (384)
Q Consensus       135 --------------~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vs-S~~  191 (384)
                                    ++..+|...... ..+|++.++.+.|.+.++.|+..++..++.++|+++       +||.+. |..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence                          344555544433 356888999999999999999999999999999986       355544 333


Q ss_pred             cccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         192 MDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .....+                ..+.-+....++.+|.++|++|+.+.||+|..++.|.++-..
T Consensus       158 ssl~~P----------------fhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~  205 (299)
T PF08643_consen  158 SSLNPP----------------FHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN  205 (299)
T ss_pred             hccCCC----------------ccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence            333333                445677888999999999999999999999999999887663

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.24  E-value=4.4e-10  Score=96.89  Aligned_cols=149  Identities=21%  Similarity=0.217  Sum_probs=104.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      |+|+||||.+|+.++++|.++|++|++..|++++.++          ..+++++++|+.|++++.++++       +.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999876665          3579999999999988887665       6899


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      +|+++|....        +         ....-.+++++...- +++|++||...........       .....+....
T Consensus        64 vi~~~~~~~~--------~---------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~-------~~~~~~~~~~  119 (183)
T PF13460_consen   64 VIHAAGPPPK--------D---------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLF-------SDEDKPIFPE  119 (183)
T ss_dssp             EEECCHSTTT--------H---------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEE-------EGGTCGGGHH
T ss_pred             hhhhhhhhcc--------c---------ccccccccccccccccccceeeeccccCCCCCccc-------ccccccchhh
Confidence            9999976321        1         333334555554433 3788888876554322100       0000002245


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |...|...+.+.       ...+++...++||.+..+.
T Consensus       120 ~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  120 YARDKREAEEAL-------RESGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTT
T ss_pred             hHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCC
Confidence            666676554433       1348999999999987764

...

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.24  E-value=6.8e-10  Score=102.66  Aligned_cols=180  Identities=19%  Similarity=0.194  Sum_probs=121.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHH---------hcCCcEEEEEeecCCH------H
Q psy2854          57 KVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKE---------VQDGQIVLMELNLASF------D  120 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~~Dvs~~------~  120 (384)
                      +++++|||||.+|..+.++|..+ .++|++..|-.+ .+.+.+.+++.         ....++..+..|++.+      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            47999999999999999998866 569999888533 22233333222         2257899999999843      3


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCc
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~  199 (384)
                      ..+++++       .+|.++|||+....       ...+.+....|+.|+..+++.+...- +.+.+|||.+..... ..
T Consensus        80 ~~~~La~-------~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~-~~  144 (382)
T COG3320          80 TWQELAE-------NVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETE-YY  144 (382)
T ss_pred             HHHHHhh-------hcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeecccc-cc
Confidence            4444443       58999999986432       22345677899999999999887654 458899988654322 11


Q ss_pred             CCCCcCcC-----cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         200 DNLNGEKG-----FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       200 ~~~~~~~~-----~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+......     ..........|+.||.+.+.+++....    .|+++..++||++-.+-.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         145 SNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             CCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence            11111100     001111345799999999888776544    499999999999965543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.22  E-value=6e-10  Score=111.83  Aligned_cols=186  Identities=17%  Similarity=0.203  Sum_probs=121.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchh--HHHHH-HHH---------HHHhc-------CCcEEE
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIR--GQEAL-EKL---------KKEVQ-------DGQIVL  111 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~---~Vi~~~r~~~~--~~~~~-~~l---------~~~~~-------~~~~~~  111 (384)
                      ++||+++||||+|.||+.++++|++.+.   +|++..|..+.  ..+.. +++         ++..+       ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998753   68888885432  22222 121         22211       247889


Q ss_pred             EEeecCCHH------HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCc
Q psy2854         112 MELNLASFD------SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQK  183 (384)
Q Consensus       112 ~~~Dvs~~~------~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~  183 (384)
                      +..|+++++      ..+.+.    +   .+|++||+|+....       .+..+..+++|+.|+.++++.+...  +++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~----~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~~~lk~  262 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA----K---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKCKKLKL  262 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH----h---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHcCCCCe
Confidence            999999872      333322    2   58999999997531       1346678999999999999988654  457


Q ss_pred             EEEEcCcccccCCc---CcCCCC--c--------------------------------CcCcc----------------c
Q psy2854         184 VVIVGSSLMDRGTI---DFDNLN--G--------------------------------EKGFV----------------Q  210 (384)
Q Consensus       184 iv~vsS~~~~~~~~---~~~~~~--~--------------------------------~~~~~----------------~  210 (384)
                      +|++||...+....   .-..+.  .                                ..+..                .
T Consensus       263 fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~  342 (605)
T PLN02503        263 FLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAK  342 (605)
T ss_pred             EEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhh
Confidence            88888876543221   000010  0                                00000                0


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .......|..||+..|.+.+..+     .++.+..++|+.|.+...+.
T Consensus       343 ~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP  385 (605)
T PLN02503        343 LYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDP  385 (605)
T ss_pred             hCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCC
Confidence            01122479999998888876322     37999999999996654433

>PRK05865 hypothetical protein; Provisional

Probab=99.18  E-value=5.1e-10  Score=115.99  Aligned_cols=130  Identities=15%  Similarity=0.057  Sum_probs=102.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|+....      .     ..++.++.+|++|.+++.++++       ++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            699999999999999999999999999999874211      1     1257789999999998887765       489


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++||+|+....             .+++|+.++.++++++...- +++|++||..                         
T Consensus        64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------  105 (854)
T PRK05865         64 VVAHCAWVRGR-------------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------  105 (854)
T ss_pred             EEEECCCcccc-------------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------
Confidence            99999986321             35789999999998887653 4788887731                         


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                           |.+.+.+.+    +   .|+++..++|+.+..+-
T Consensus       106 -----K~aaE~ll~----~---~gl~~vILRp~~VYGP~  132 (854)
T PRK05865        106 -----QPRVEQMLA----D---CGLEWVAVRCALIFGRN  132 (854)
T ss_pred             -----HHHHHHHHH----H---cCCCEEEEEeceEeCCC
Confidence                 666666553    2   48999999999998764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.17  E-value=1.9e-10  Score=101.66  Aligned_cols=179  Identities=18%  Similarity=0.131  Sum_probs=126.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH--hcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE--VQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +|++||||-+|-=|..+|+.|+++|+.|..+.|.........-.+...  ..+.+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            689999999999999999999999999999888632211111012111  12346889999999999999999987    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                       .+|-+.|-|+.+..+    .+.+.-+.+.+++..|+.+++.+..-.-.   |+..-||+. ..|...-.+..+..++. 
T Consensus        78 -~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE-~fG~v~~~pq~E~TPFy-  150 (345)
T COG1089          78 -QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE-LYGLVQEIPQKETTPFY-  150 (345)
T ss_pred             -Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH-hhcCcccCccccCCCCC-
Confidence             789999988875433    24555566899999999999988765433   344444443 44443333333434433 


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhC---CCCcEEEEEec
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYA---DKGVDVSVVCP  248 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~---~~gI~v~~v~P  248 (384)
                         +.+.|+++|......+..++..+.   ..||-+|.=+|
T Consensus       151 ---PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP  188 (345)
T COG1089         151 ---PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP  188 (345)
T ss_pred             ---CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC
Confidence               788999999999999999888763   34555555444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.14  E-value=1.2e-09  Score=113.13  Aligned_cols=154  Identities=17%  Similarity=0.019  Sum_probs=105.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .++++||||+|-||++++++|.++|++|..                          ...|++|.+.+++.+++.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence            457999999999999999999999988732                          113677888777766553     6


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCc---C--cCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTI---D--FDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~---~--~~~~~~~~~~~~  210 (384)
                      +|++||+|+....... +..+++-+..+++|+.++.++++++...-.+.+++||...+.+..   .  -..+.++..   
T Consensus       429 pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~---  504 (668)
T PLN02260        429 PTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDK---  504 (668)
T ss_pred             CCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCCC---
Confidence            8999999998543211 223445577899999999999999988755777777765432211   0  011222211   


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVC  247 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~  247 (384)
                      +.+....|+.||.+.+.+++.+..   ...+|+..+.
T Consensus       505 ~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        505 PNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence            111336899999999999887642   2356666655

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.14  E-value=2.1e-10  Score=102.06  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=79.3

Q ss_pred             CEEEEeCC-CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGA-NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGa-s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .+=.||.. |||||+++|++|+++|++|+++++..        .+..   ..   ...||+++.++++++++++.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~--------~l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR--------ALKP---EP---HPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh--------hccc---cc---CCcceeecHHHHHHHHHHHHHHcCC
Confidence            34556665 67899999999999999999987631        0100   00   2468999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHH
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN  175 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  175 (384)
                      +|++|||||+....+..+.+.++|++++.   .+.+++++
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            99999999997777788889999997744   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.13  E-value=1.2e-09  Score=101.15  Aligned_cols=167  Identities=19%  Similarity=0.029  Sum_probs=99.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      ++||||+|.||.+++++|+++|++|++++|+.++.....          ...  ..|+.. ..       ..+....+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~-------~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LA-------ESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cc-------hhhhcCCCCE
Confidence            589999999999999999999999999999875432110          000  112222 11       1223457999


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-c-EEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-K-VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~-iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      +||+||.....  ...+.+..+..+++|+.++..+.+++...-. + +++.+|+.+..+......+.+....    .+..
T Consensus        61 Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~----~~~~  134 (292)
T TIGR01777        61 VINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSP----AGDD  134 (292)
T ss_pred             EEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCC----CCCC
Confidence            99999974321  1124445567889999999999999887643 2 3333443333332211122222210    0222


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .|+..+...+....    .....++++..++|+.+..+.
T Consensus       135 ~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~  169 (292)
T TIGR01777       135 FLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPK  169 (292)
T ss_pred             hHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCC
Confidence            34433433333322    223458999999999998773

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.08  E-value=1.3e-09  Score=93.07  Aligned_cols=84  Identities=12%  Similarity=0.109  Sum_probs=70.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+ |+|.+++++|+++|++|++.+|+.++.++....+..   ..++.++++|++|++++.++++.+.++++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 788889999999999999999987665554433321   35788899999999999999999999999999


Q ss_pred             EEEECCCC
Q psy2854         138 VLINNAGV  145 (384)
Q Consensus       138 ~lvnnAG~  145 (384)
                      ++|+.+-.
T Consensus        78 ~lv~~vh~   85 (177)
T PRK08309         78 LAVAWIHS   85 (177)
T ss_pred             EEEEeccc
Confidence            99988765

>KOG0747|consensus

Probab=99.06  E-value=1.6e-09  Score=95.73  Aligned_cols=182  Identities=16%  Similarity=0.091  Sum_probs=126.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      |.++||||.|.||...+..++..  .++.+..+.-. -... .+.+++.....+..+++.|+.+...+..++.+     .
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~-~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~   79 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLD-YCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----E   79 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecc-cccc-cchhhhhccCCCceEeeccccchHHHHhhhcc-----C
Confidence            89999999999999999999976  44444332210 0001 22222222246788999999998877766543     4


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      .+|.++|-|........    .-+--.....|++++..|++.....  +++.|.+|+...++....- ....+....   
T Consensus        80 ~id~vihfaa~t~vd~s----~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~-~~~~E~s~~---  151 (331)
T KOG0747|consen   80 EIDTVIHFAAQTHVDRS----FGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDED-AVVGEASLL---  151 (331)
T ss_pred             chhhhhhhHhhhhhhhh----cCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccc-ccccccccC---
Confidence            89999999987543221    1111235678999999999988765  4589999998876544321 111122222   


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+-..|++||+|.+++.+++.+.+   |+.|..++-+.|..|-.
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCc
Confidence            255679999999999999999886   89999999999988853

>KOG4022|consensus

Probab=99.02  E-value=2.5e-08  Score=81.00  Aligned_cols=178  Identities=13%  Similarity=0.032  Sum_probs=118.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC-
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP-  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g-  134 (384)
                      -.+|+|-||-+.+|.++++.|-++++-|.-++-.+.  ++          ...-..+..|-+=.++-+.+.+++-+.++ 
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eN--e~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSEN--EQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccc--cc----------ccceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            457999999999999999999999999887665531  11          11223345555555666677777766543 


Q ss_pred             -CccEEEECCCCCCCCCCCCC-ChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEc-CcccccCCcCcCCCCcCcCcc
Q psy2854         135 -KIHVLINNAGVSVPIKEKLT-TKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVG-SSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 -~id~lvnnAG~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vs-S~~~~~~~~~~~~~~~~~~~~  209 (384)
                       ++|.+++-||-...+.-... -...-+.++.-.+.....-.+....+++  ..+-+. .-++..+.|            
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTP------------  138 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTP------------  138 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCC------------
Confidence             79999999987444332211 1122334454455555444555556665  233222 222233333            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccccCch
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                          ++..|+.+|+|+.+++++|+.+-.  +.|--+.+|.|-..+|||.+++-+
T Consensus       139 ----gMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP  188 (236)
T KOG4022|consen  139 ----GMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP  188 (236)
T ss_pred             ----cccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence                788999999999999999998744  557788999999999999987643

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.97  E-value=2e-08  Score=112.47  Aligned_cols=186  Identities=18%  Similarity=0.175  Sum_probs=119.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC----CEEEEEecCchhHHHHHHHHHHHh---c------CCcEEEEEeecCCHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK----ATVVLGCRSMIRGQEALEKLKKEV---Q------DGQIVLMELNLASFDS  121 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~l~~~~---~------~~~~~~~~~Dvs~~~~  121 (384)
                      ..++++||||+|.||.+++++|+++|    .+|+...|+..... ..+.+....   +      ..++.++.+|++++.-
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA-GLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH-HHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence            35899999999999999999999987    78998889754322 222222110   0      1368899999986421


Q ss_pred             H--HHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcC
Q psy2854         122 I--KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTID  198 (384)
Q Consensus       122 v--~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~  198 (384)
                      -  ....+++.   ..+|++||||+.....       ..++.....|+.|+..+++.+...- ++++++||.+.......
T Consensus      1049 gl~~~~~~~l~---~~~d~iiH~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~ 1118 (1389)
T TIGR03443      1049 GLSDEKWSDLT---NEVDVIIHNGALVHWV-------YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYY 1118 (1389)
T ss_pred             CcCHHHHHHHH---hcCCEEEECCcEecCc-------cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccc
Confidence            0  11122222   3689999999974311       1233345679999999999887543 47999999866532110


Q ss_pred             c-----------CCCCcCcCcc-cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         199 F-----------DNLNGEKGFV-QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       199 ~-----------~~~~~~~~~~-~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .           ..+....... ........|+.||.+.+.+++..+.    .|+++..++||.|..+-
T Consensus      1119 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1119 VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            0           0111111000 0111234699999999998876543    48999999999997664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1208|consensus

Probab=98.94  E-value=4.3e-08  Score=91.10  Aligned_cols=83  Identities=31%  Similarity=0.443  Sum_probs=66.8

Q ss_pred             ccccccccccCCCcc--ccccCCCCccccccccccccchHHHHHHhhcCCceEEEeecCceecc-ccccCChhHHHHHHH
Q psy2854         285 DRGTIDFDNLNGEKG--FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTN-LFRHADIKFYQKVMI  361 (384)
Q Consensus       285 ~~~~i~f~~l~g~~~--~~~~g~~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~-l~~~~~~~~~~~~~~  361 (384)
                      +...+++++++++..  |    ....+|++||+++++++.||++++.+ ||+++++|||.++|+ +.|.   +...+.+.
T Consensus       174 ~~~~~~~~~l~~~~~~~~----~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~---~~~~~~l~  245 (314)
T KOG1208|consen  174 GGGKIDLKDLSGEKAKLY----SSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV---NLLLRLLA  245 (314)
T ss_pred             ccCccchhhccchhccCc----cchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc---hHHHHHHH
Confidence            344578899988764  4    34457999999999999999999988 999999999999999 7872   24566677


Q ss_pred             HHHHHHHhcChhhh
Q psy2854         362 FPIAMMYMRSANQL  375 (384)
Q Consensus       362 ~~~~~~~~~~~~~~  375 (384)
                      +.+...+.||+++-
T Consensus       246 ~~l~~~~~ks~~~g  259 (314)
T KOG1208|consen  246 KKLSWPLTKSPEQG  259 (314)
T ss_pred             HHHHHHhccCHHHH
Confidence            77878778888763

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.86  E-value=1.3e-08  Score=97.58  Aligned_cols=83  Identities=23%  Similarity=0.287  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEeCC---------------CCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          52 KPMEGKVCIITGA---------------NSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        52 ~~~~~k~vlITGa---------------s~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .+++||+++||||               |+| +|+++|++|+++|++|++++++.+ .+         . ..  ....+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~--~~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PA--GVKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CC--CcEEEc
Confidence            3588999999999               555 999999999999999999988742 10         0 11  134689


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCC
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~  150 (384)
                      +++.+++.+.++   +.++++|++|||||+....+
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence            999888777665   55789999999999865443

>PRK12320 hypothetical protein; Provisional

Probab=98.81  E-value=1.7e-07  Score=95.61  Aligned_cols=136  Identities=14%  Similarity=0.070  Sum_probs=96.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|.||++++++|.++|++|++++|+...       .    ....+.++++|++|+. +.+++       .++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~----~~~~ve~v~~Dl~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A----LDPRVDYVCASLRNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c----ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence            58999999999999999999999999999986431       0    1235778999999873 33322       2689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||.|+....      .      ...+|+.++.++++++...-.++|++||..   +.+                  ..
T Consensus        63 ~VIHLAa~~~~------~------~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~---G~~------------------~~  109 (699)
T PRK12320         63 AVIHLAPVDTS------A------PGGVGITGLAHVANAAARAGARLLFVSQAA---GRP------------------EL  109 (699)
T ss_pred             EEEEcCccCcc------c------hhhHHHHHHHHHHHHHHHcCCeEEEEECCC---CCC------------------cc
Confidence            99999986311      1      124799999999999877666888888753   211                  01


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      |.    ..+.+    ..+   .++.+..+.|+.+..+-.
T Consensus       110 ~~----~aE~l----l~~---~~~p~~ILR~~nVYGp~~  137 (699)
T PRK12320        110 YR----QAETL----VST---GWAPSLVIRIAPPVGRQL  137 (699)
T ss_pred             cc----HHHHH----HHh---cCCCEEEEeCceecCCCC
Confidence            22    12222    222   357899999999988743

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.76  E-value=7.8e-08  Score=89.01  Aligned_cols=76  Identities=13%  Similarity=0.076  Sum_probs=60.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC-c
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK-I  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~-i  136 (384)
                      +++||||||.+|++++++|.++|++|.+..|++++..           ...+..+.+|++|++++.++++.. +.... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3789999999999999999999999999999976431           123556789999999999887653 22334 8


Q ss_pred             cEEEECCCC
Q psy2854         137 HVLINNAGV  145 (384)
Q Consensus       137 d~lvnnAG~  145 (384)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999998864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=6.1e-08  Score=89.67  Aligned_cols=86  Identities=20%  Similarity=0.213  Sum_probs=65.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++.++..+++.+.  ...+....+|+++.+++++.++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE--VPECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc--CCCceeEEechhhhhHHHhhhc-
Confidence            467899999999 69999999999999996 99999997   6666666666443  2345556789888776655433 


Q ss_pred             HHHhCCCccEEEECCCCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVP  148 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~  148 (384)
                            ..|+||||..+.+.
T Consensus       199 ------~~DilINaTp~Gm~  212 (289)
T PRK12548        199 ------SSDILVNATLVGMK  212 (289)
T ss_pred             ------cCCEEEEeCCCCCC
Confidence                  46999999876543

>PLN00016 RNA-binding protein; Provisional

Probab=98.74  E-value=5e-07  Score=87.19  Aligned_cols=159  Identities=16%  Similarity=0.113  Sum_probs=99.1

Q ss_pred             CCCCEEEEe----CCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHH----HHHHHHhcCCcEEEEEeecCCHHHHHHH
Q psy2854          54 MEGKVCIIT----GANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL----EKLKKEVQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        54 ~~~k~vlIT----Gas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      ...++|+||    ||+|.||.+++++|+++|++|++++|+........    ....+ .....+.++.+|++|   +.++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE-LSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhH-hhhcCceEEEecHHH---HHhh
Confidence            445789999    99999999999999999999999999865422110    00111 111247788899876   3322


Q ss_pred             HHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCc
Q psy2854         126 AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +.     ...+|++||++|.         ..           .++..+++++... .+++|++||...+.... .....+
T Consensus       126 ~~-----~~~~d~Vi~~~~~---------~~-----------~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~-~~p~~E  179 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGK---------DL-----------DEVEPVADWAKSPGLKQFLFCSSAGVYKKSD-EPPHVE  179 (378)
T ss_pred             hc-----cCCccEEEeCCCC---------CH-----------HHHHHHHHHHHHcCCCEEEEEccHhhcCCCC-CCCCCC
Confidence            21     1368999999763         11           1233455665533 45899999986543221 111111


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ...       ...+. +|...+.+.+       ..++++..++|+.+..+...
T Consensus       180 ~~~-------~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~  217 (378)
T PLN00016        180 GDA-------VKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNN  217 (378)
T ss_pred             CCc-------CCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCC
Confidence            111       11122 7887776543       24899999999999887643

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.70  E-value=6.8e-08  Score=92.39  Aligned_cols=111  Identities=15%  Similarity=0.150  Sum_probs=77.0

Q ss_pred             CCCCCEEEEeCC---------------CCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeec
Q psy2854          53 PMEGKVCIITGA---------------NSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL  116 (384)
Q Consensus        53 ~~~~k~vlITGa---------------s~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  116 (384)
                      +++||+++||||               ||| +|.++|++|+++|++|++++++....          . ...  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEe
Confidence            578999999999               677 99999999999999999988764210          1 112  256899


Q ss_pred             CCHHHH-HHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhH---HHHhchhhhHHHHHHHHHHHh
Q psy2854         117 ASFDSI-KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGY---EVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       117 s~~~~v-~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~---~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      ++.+++ +++.++.   ++++|++|||||+....+... ..+.+   +..+.+|+.-.--+++.+...
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~-~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTV-FEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccccccccc-ccccccccCCceeEEEEeCcHHHHHHHhh
Confidence            999888 5555443   468999999999976554432 11111   224556766666666655543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.68  E-value=1.5e-07  Score=83.45  Aligned_cols=162  Identities=17%  Similarity=0.094  Sum_probs=95.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      ++||||+|-||++++.+|.+.|++|++..|++.+.++...        ..+.       ..+.+....    .  .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------~~v~-------~~~~~~~~~----~--~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------PNVT-------LWEGLADAL----T--LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------cccc-------ccchhhhcc----c--CCCCE
Confidence            5899999999999999999999999999999765443211        0110       111111111    1  17999


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      +||-||........  +.+.=+..++.-+..+-.+.+.+...-.  ++..-+|..++++......+.+.....       
T Consensus        60 vINLAG~~I~~rrW--t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-------  130 (297)
T COG1090          60 VINLAGEPIAERRW--TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG-------  130 (297)
T ss_pred             EEECCCCccccccC--CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC-------
Confidence            99999975443322  4454455555555555555554443222  455566666666655433333332111       


Q ss_pred             hhhhcHHHHHHHHHHHHHH---hCCCCcEEEEEecCcccCCc
Q psy2854         217 AYCNSKLMNYYFGAELYLK---YADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e---~~~~gI~v~~v~PG~v~T~~  255 (384)
                           .-.+..+|+.+-.+   ....|+||..++-|.|-.+-
T Consensus       131 -----~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~  167 (297)
T COG1090         131 -----DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPD  167 (297)
T ss_pred             -----CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCC
Confidence                 11223344444333   23459999999999986643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.64  E-value=1.4e-06  Score=78.01  Aligned_cols=147  Identities=15%  Similarity=0.100  Sum_probs=91.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCccE
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHV  138 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id~  138 (384)
                      ++||||+|.+|+.+++.|.+.|++|.+..|+..  .+..++++.    ..+..+.+|..|.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~----~g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQA----LGAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHH----TTTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhc----ccceEeecccCCHHHHHHHHc-------CCce
Confidence            689999999999999999999999999999873  223344443    245677999999998887775       7899


Q ss_pred             EEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhh
Q psy2854         139 LINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAY  218 (384)
Q Consensus       139 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  218 (384)
                      ++++-+...        ..+        ......+++++...-.+.+..||.........        +.    .+....
T Consensus        68 v~~~~~~~~--------~~~--------~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~--------~~----~p~~~~  119 (233)
T PF05368_consen   68 VFSVTPPSH--------PSE--------LEQQKNLIDAAKAAGVKHFVPSSFGADYDESS--------GS----EPEIPH  119 (233)
T ss_dssp             EEEESSCSC--------CCH--------HHHHHHHHHHHHHHT-SEEEESEESSGTTTTT--------TS----TTHHHH
T ss_pred             EEeecCcch--------hhh--------hhhhhhHHHhhhccccceEEEEEecccccccc--------cc----cccchh
Confidence            999887632        111        12233455666555444444566543321110        00    012223


Q ss_pred             hhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         219 CNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       219 ~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                      -..|..++.+.+.       .+++.+.++||+...
T Consensus       120 ~~~k~~ie~~l~~-------~~i~~t~i~~g~f~e  147 (233)
T PF05368_consen  120 FDQKAEIEEYLRE-------SGIPYTIIRPGFFME  147 (233)
T ss_dssp             HHHHHHHHHHHHH-------CTSEBEEEEE-EEHH
T ss_pred             hhhhhhhhhhhhh-------ccccceeccccchhh
Confidence            3456666544432       389999999997543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.63  E-value=8.5e-07  Score=87.65  Aligned_cols=125  Identities=14%  Similarity=0.144  Sum_probs=84.4

Q ss_pred             CCEEE----EeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          56 GKVCI----ITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        56 ~k~vl----ITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |..++    |+||++|+|.++++.|...|++|+.+.+...+..        .....++..+.+|.+..++          
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~----------   95 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITD----------   95 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCC----------
Confidence            44555    8888999999999999999999998766532100        0001122223333333222          


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                                              .+++        .+.+.+.+..++.|.   +||+++|.....              
T Consensus        96 ------------------------~~~l--------~~~~~~~~~~l~~l~~~griv~i~s~~~~~--------------  129 (450)
T PRK08261         96 ------------------------PADL--------KALYEFFHPVLRSLAPCGRVVVLGRPPEAA--------------  129 (450)
T ss_pred             ------------------------HHHH--------HHHHHHHHHHHHhccCCCEEEEEccccccC--------------
Confidence                                    2221        233355666666664   799998875532              


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGW  250 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~  250 (384)
                           ....|+++|+++.++++++++|+ +.|++++.|.|+.
T Consensus       130 -----~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~  165 (450)
T PRK08261        130 -----ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP  165 (450)
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence                 33469999999999999999999 7899999999986

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.61  E-value=2.1e-07  Score=83.00  Aligned_cols=100  Identities=19%  Similarity=0.173  Sum_probs=68.6

Q ss_pred             CEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .+-.||+.|+| ||+++|++|+++|++|++++|+...        ... ....+.++.++  +   .++..+.+.+.+++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~-~~~~v~~i~v~--s---~~~m~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPE-PHPNLSIIEIE--N---VDDLLETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCC-CCCCeEEEEEe--c---HHHHHHHHHHHhcC
Confidence            37778887766 9999999999999999999876321        000 11245555542  2   23333334444567


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHH
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH  170 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~  170 (384)
                      +|++|||||+....+....+.+++..++++|.+..
T Consensus        82 ~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            99999999997655666667888999988876544

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=5.9e-07  Score=78.24  Aligned_cols=85  Identities=22%  Similarity=0.262  Sum_probs=67.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++++++|+||+|++|+++++.|++.|++|++++|+.++.++..+++.+..   ......+|..+.+++.+.++     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-----
Confidence            5788999999999999999999999999999999999888777776665332   23455678888887776553     


Q ss_pred             CCCccEEEECCCCCC
Q psy2854         133 YPKIHVLINNAGVSV  147 (384)
Q Consensus       133 ~g~id~lvnnAG~~~  147 (384)
                        +.|++|++.....
T Consensus        97 --~~diVi~at~~g~  109 (194)
T cd01078          97 --GADVVFAAGAAGV  109 (194)
T ss_pred             --cCCEEEECCCCCc
Confidence              5799988766533

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.56  E-value=3.4e-06  Score=82.20  Aligned_cols=191  Identities=20%  Similarity=0.160  Sum_probs=123.9

Q ss_pred             CCCCCCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGAN-SGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFA  126 (384)
Q Consensus        51 ~~~~~~k~vlITGas-~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~  126 (384)
                      .....+|+++||||+ +.||.+++.+|++-|++||++..+.+ ...+..+.+-..+  ++....++..+.++..+++.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            356789999999998 67999999999999999998765543 2233444444333  2456778899999999999999


Q ss_pred             HHHHHhCC--------------CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cE
Q psy2854         127 KNVMKQYP--------------KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KV  184 (384)
Q Consensus       127 ~~i~~~~g--------------~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~i  184 (384)
                      +.|-.+..              .+|.++--|.+...+.+.+.... -+..+++-+.....++-.+.+.-.        ++
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            99965422              36788888877555555443322 233445555555555544443322        23


Q ss_pred             EEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC-CCCcEEEEEecCccc-CCccccC
Q psy2854         185 VIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA-DKGVDVSVVCPGWCY-TNLFRHA  259 (384)
Q Consensus       185 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~-~~gI~v~~v~PG~v~-T~~~~~~  259 (384)
                      |.=+|..  +|.               +.+..+|+.||++++.+..-+..|-. ...+.+..-.-||++ |.++...
T Consensus       550 VLPgSPN--rG~---------------FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~N  609 (866)
T COG4982         550 VLPGSPN--RGM---------------FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHN  609 (866)
T ss_pred             EecCCCC--CCc---------------cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCc
Confidence            3333321  111               11667899999999998877776632 223566666778886 5555443

>KOG1221|consensus

Probab=98.52  E-value=1.6e-06  Score=83.60  Aligned_cols=186  Identities=18%  Similarity=0.206  Sum_probs=115.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCch--hHH---------HHHHHHHHHhcC--CcEEEEEeecC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMI--RGQ---------EALEKLKKEVQD--GQIVLMELNLA  117 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G---~~Vi~~~r~~~--~~~---------~~~~~l~~~~~~--~~~~~~~~Dvs  117 (384)
                      +++|+++||||+|.+|+-+.++|++.-   -++++.-|...  ..+         ...+.+++..+.  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            679999999999999999999999763   25777766431  111         122222332222  57888889998


Q ss_pred             CHH------HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcC
Q psy2854         118 SFD------SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGS  189 (384)
Q Consensus       118 ~~~------~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS  189 (384)
                      +++      +.+.+.       ..+|++||+|+...       -.|.++..+.+|..|+.++++.+....+  ..+.+|+
T Consensus        90 ~~~LGis~~D~~~l~-------~eV~ivih~AAtvr-------Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVST  155 (467)
T KOG1221|consen   90 EPDLGISESDLRTLA-------DEVNIVIHSAATVR-------FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVST  155 (467)
T ss_pred             CcccCCChHHHHHHH-------hcCCEEEEeeeeec-------cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeeh
Confidence            754      233222       37899999998743       2355677899999999999998876543  6777777


Q ss_pred             cccccCCc--------CcCCCCcC-----------------cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEE
Q psy2854         190 SLMDRGTI--------DFDNLNGE-----------------KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVS  244 (384)
Q Consensus       190 ~~~~~~~~--------~~~~~~~~-----------------~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~  244 (384)
                      ........        .....+..                 .... .......|.-+|+..+.+...-     ..++.+.
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l-~~~~PNTYtfTKal~E~~i~~~-----~~~lPiv  229 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKL-LGGWPNTYTFTKALAEMVIQKE-----AENLPLV  229 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHh-cCCCCCceeehHhhHHHHHHhh-----ccCCCeE
Confidence            65541110        00000000                 0000 0011235777777666654432     3468899


Q ss_pred             EEecCcccCCccccC
Q psy2854         245 VVCPGWCYTNLFRHA  259 (384)
Q Consensus       245 ~v~PG~v~T~~~~~~  259 (384)
                      .++|..|-+......
T Consensus       230 IiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  230 IIRPSIITSTYKEPF  244 (467)
T ss_pred             EEcCCceeccccCCC
Confidence            999998877654443

>KOG1202|consensus

Probab=98.52  E-value=4.1e-07  Score=93.75  Aligned_cols=164  Identities=18%  Similarity=0.130  Sum_probs=130.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ..|..+|+||-||.|.++|..|..+|++ +++++|+.-+.---...++... .+.++.+-..|++..+..++++++.. +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            3589999999999999999999999996 8889998655433233333221 24556666678888888888888764 5


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHH---HHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN---LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~---~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      .+.+..++|-|.+...+-+++.+++.|+..-+-.+.|+.++-+   ...|.+.-+|.+||...-+|+.            
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~------------ 1913 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA------------ 1913 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC------------
Confidence            6899999999999888889999999999999999999987654   4556677889999998877776            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHH
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLK  235 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e  235 (384)
                          ++..|+-+..+++.+++.-+.+
T Consensus      1914 ----GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1914 ----GQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ----cccccchhhHHHHHHHHHhhhc
Confidence                7888999999999998765444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.32  E-value=1.2e-05  Score=73.61  Aligned_cols=144  Identities=14%  Similarity=0.059  Sum_probs=96.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++||||||.+|.+++++|.++|.+|.+..|+.++.....         ..+.....|+.++.++...++       ++|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            6899999999999999999999999999999976655433         467888999999998887765       678


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      .+++..+... ....         .......+.....+.......+++.+|+......                  ....
T Consensus        66 ~~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------------------~~~~  117 (275)
T COG0702          66 GVLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------------------SPSA  117 (275)
T ss_pred             EEEEEecccc-cccc---------hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------------------CccH
Confidence            8888887643 2110         1122333444444444422335666655543321                  3357


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEe-cCccc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVC-PGWCY  252 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~-PG~v~  252 (384)
                      |..+|...+...++       .|+.-..+. |+++.
T Consensus       118 ~~~~~~~~e~~l~~-------sg~~~t~lr~~~~~~  146 (275)
T COG0702         118 LARAKAAVEAALRS-------SGIPYTTLRRAAFYL  146 (275)
T ss_pred             HHHHHHHHHHHHHh-------cCCCeEEEecCeeee
Confidence            88889887766543       466655555 44443

>KOG2865|consensus

Probab=98.30  E-value=9.2e-06  Score=72.35  Aligned_cols=159  Identities=21%  Similarity=0.199  Sum_probs=111.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+.+|-++-|-||||.+|+.++.+|++.|-+|++-.|..+......+   -...-+++.+...|+.|+++|+++++.   
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lk---vmGdLGQvl~~~fd~~DedSIr~vvk~---  130 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLK---VMGDLGQVLFMKFDLRDEDSIRAVVKH---  130 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhee---ecccccceeeeccCCCCHHHHHHHHHh---
Confidence            35778899999999999999999999999999999886543332222   111127899999999999999999874   


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                          -+++||--|--.+..  ..+      .-++|+.++-.+.+.+...-. |.|.+|+..+...               
T Consensus       131 ----sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~---------------  183 (391)
T KOG2865|consen  131 ----SNVVINLIGRDYETK--NFS------FEDVNVHIAERLARICKEAGVERFIHVSCLGANVK---------------  183 (391)
T ss_pred             ----CcEEEEeeccccccC--Ccc------cccccchHHHHHHHHHHhhChhheeehhhcccccc---------------
Confidence                489999988633221  111      235788888888887765543 8888887653311               


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                         +.+-|=-||++-+--.+.   ++.    ....+.|..+..
T Consensus       184 ---s~Sr~LrsK~~gE~aVrd---afP----eAtIirPa~iyG  216 (391)
T KOG2865|consen  184 ---SPSRMLRSKAAGEEAVRD---AFP----EATIIRPADIYG  216 (391)
T ss_pred             ---ChHHHHHhhhhhHHHHHh---hCC----cceeechhhhcc
Confidence               345577788776654432   331    256678876654

>KOG1203|consensus

Probab=98.21  E-value=3.1e-05  Score=73.67  Aligned_cols=173  Identities=19%  Similarity=0.153  Sum_probs=103.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH-HHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKN-FAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~-~~~~i~~  131 (384)
                      ..+..+|+|+||+|++|+-+++.|.++|+.|..+.|+.++.++... +  .........+..|.....++.. +++.+  
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~d~~~~~~~~~--  150 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAIDILKKLVEAV--  150 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeeccccccchhhhhhhhc--
Confidence            4566899999999999999999999999999999999776665544 1  1112234445555554443332 22221  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                       --...+++-++|.- +...      +...-..+...|..++++++.... ++++.+||..+......+..+.       
T Consensus       151 -~~~~~~v~~~~ggr-p~~e------d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~-------  215 (411)
T KOG1203|consen  151 -PKGVVIVIKGAGGR-PEEE------DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILL-------  215 (411)
T ss_pred             -cccceeEEecccCC-CCcc------cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhh-------
Confidence             11355677777652 2211      222233567788888899886553 4899998876654332100000       


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                         ....+..+|.       ....++.+.|+.-..|.||....+.
T Consensus       216 ---~~~~~~~~k~-------~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  216 ---LNGLVLKAKL-------KAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             ---hhhhhhHHHH-------hHHHHHHhcCCCcEEEeccccccCC
Confidence               0011122232       2233445679999999999776643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.19  E-value=1.4e-05  Score=79.03  Aligned_cols=77  Identities=29%  Similarity=0.325  Sum_probs=58.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++.+    ..+.++..|..+            +
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~~~~------------~   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE----LGIELVLGEYPE------------E   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----cCCEEEeCCcch------------h
Confidence            46789999999877 99999999999999999999975 333443444432    235567778765            1


Q ss_pred             hCCCccEEEECCCCC
Q psy2854         132 QYPKIHVLINNAGVS  146 (384)
Q Consensus       132 ~~g~id~lvnnAG~~  146 (384)
                      ..++.|++|+++|+.
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            235789999999984

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.17  E-value=1.2e-05  Score=65.55  Aligned_cols=80  Identities=23%  Similarity=0.343  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++++++|.|+ ||.|++++..|++.|++ |+++.|+.++.++..+++    ++..+.++  ++.+..   +..    
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~--~~~~~~---~~~----   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAI--PLEDLE---EAL----   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEE--EGGGHC---HHH----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Ccccccee--eHHHHH---HHH----
Confidence            4688999999997 99999999999999997 999999988877777666    22344443  333333   222    


Q ss_pred             HhCCCccEEEECCCCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP  148 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~  148 (384)
                         ...|++||+.+..+.
T Consensus        74 ---~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   74 ---QEADIVINATPSGMP   88 (135)
T ss_dssp             ---HTESEEEE-SSTTST
T ss_pred             ---hhCCeEEEecCCCCc
Confidence               268999999887544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.17  E-value=9.1e-06  Score=77.08  Aligned_cols=77  Identities=23%  Similarity=0.353  Sum_probs=64.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +.++|.|| |++|+.+|+.|+++| .+|++++|+.++..+..+..     ..++.+.++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            46889998 999999999999999 89999999988777665543     34789999999999988887763       


Q ss_pred             ccEEEECCCCC
Q psy2854         136 IHVLINNAGVS  146 (384)
Q Consensus       136 id~lvnnAG~~  146 (384)
                      .|++||++...
T Consensus        69 ~d~VIn~~p~~   79 (389)
T COG1748          69 FDLVINAAPPF   79 (389)
T ss_pred             CCEEEEeCCch
Confidence            39999998763

>KOG1372|consensus

Probab=98.17  E-value=4.7e-06  Score=72.58  Aligned_cols=180  Identities=18%  Similarity=0.127  Sum_probs=115.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKE---VQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .|+++|||-+|-=|..+|+-|+++|++|..+-|.... ....++.+-..   ..++.....-.|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4799999999999999999999999999877665433 23334444221   12356677789999999999999887  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cE-EEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KV-VIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~i-v~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                         .++-+.|-|...+..-    +.|--+.+-++...|++.++.+....-.  ++ .+-.|.+-..|...-.+-++..++
T Consensus       106 ---kPtEiYnLaAQSHVkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPF  178 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPF  178 (376)
T ss_pred             ---CchhhhhhhhhcceEE----EeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCC
Confidence               4666777777654332    2222344566888999999888765432  22 222333333343322222222333


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHh---CCCCcEEEEEec
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKY---ADKGVDVSVVCP  248 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~---~~~gI~v~~v~P  248 (384)
                          .+.+.|+++|.+....+-.++..+   +-.||-+|.=+|
T Consensus       179 ----yPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  179 ----YPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             ----CCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence                377899999987766665555544   344666665555

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.15  E-value=9.9e-06  Score=76.05  Aligned_cols=58  Identities=31%  Similarity=0.428  Sum_probs=46.2

Q ss_pred             ccccccCCCccccccCCCCccccccccccccchHHHHHHhh--cCCceEEEeecCceecccccc
Q psy2854         289 IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       289 i~f~~l~g~~~~~~~g~~~~~Y~~sKl~~~~~~~ela~~l~--~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      +.|++++....+    ....+|+.||+++.+++++|++++.  .+||+||++|||+++|++.++
T Consensus       158 ~~~~~~~~~~~~----~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        158 INWDDLNWERSY----AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             cCcccccccccC----cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence            456666544333    3456799999999999999999864  468999999999999999864

>KOG1431|consensus

Probab=98.14  E-value=2.9e-05  Score=66.90  Aligned_cols=162  Identities=16%  Similarity=0.063  Sum_probs=99.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++++|||++|-.|+|+.+.+.+.|.   +.++.+.                       -.+|+++.++.++++++.    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            5899999999999999999999876   2333221                       258999999999998865    


Q ss_pred             CCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCc-cc
Q psy2854         134 PKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGF-VQ  210 (384)
Q Consensus       134 g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~-~~  210 (384)
                       ++-.+||.|+....- .-...+.+-|...+++|    -+.++.+..+- +++++..|++-+ +...-.++++..-. ..
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv~K~vsclStCIf-Pdkt~yPIdEtmvh~gp  128 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGVKKVVSCLSTCIF-PDKTSYPIDETMVHNGP  128 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHHhchhhhhhhcceeec-CCCCCCCCCHHHhccCC
Confidence             567788887642211 11112344444433333    23334444443 367776666543 21111223332111 11


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      +.+....|+-+|..+.-..++++.++   |-...++.|--+..|
T Consensus       129 phpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGp  169 (315)
T KOG1431|consen  129 PHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGP  169 (315)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCC
Confidence            22255679999998888889998886   556677777666655

>KOG2733|consensus

Probab=98.07  E-value=1.4e-05  Score=73.30  Aligned_cols=82  Identities=23%  Similarity=0.254  Sum_probs=71.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAK----LKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      -++|-||||--|..+++++.+    .|..+-+.+||++++++.++++.+..+.  ....++.||.+|++++.+.+++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            489999999999999999999    7899999999999999999998776532  23348899999999999998854  


Q ss_pred             hCCCccEEEECCCCC
Q psy2854         132 QYPKIHVLINNAGVS  146 (384)
Q Consensus       132 ~~g~id~lvnnAG~~  146 (384)
                           .++|||+|..
T Consensus        85 -----~vivN~vGPy   94 (423)
T KOG2733|consen   85 -----RVIVNCVGPY   94 (423)
T ss_pred             -----EEEEeccccc
Confidence                 7899999974

>KOG1200|consensus

Probab=98.03  E-value=3.6e-05  Score=64.89  Aligned_cols=70  Identities=21%  Similarity=0.136  Sum_probs=52.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCChhHHHHHHHHHHHHHHhcChhhhhH
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLEV  377 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (384)
                      ...|.+||-..+-|++..||++..++|+||.|.||+++|++...+|. -....+...+-.--.-.+||+-.
T Consensus       161 QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-~v~~ki~~~iPmgr~G~~EevA~  230 (256)
T KOG1200|consen  161 QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-KVLDKILGMIPMGRLGEAEEVAN  230 (256)
T ss_pred             chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-HHHHHHHccCCccccCCHHHHHH
Confidence            34699999999999999999999999999999999999999998862 22333333332212235666543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.01  E-value=2.4e-05  Score=75.76  Aligned_cols=76  Identities=22%  Similarity=0.331  Sum_probs=59.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          59 CIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+|-|| |.+|+.+++.|++++-  +|++.+|+.+++++..+++    ...++...++|+.|.++++++++       +.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999974  7999999988877766654    35789999999999999888765       45


Q ss_pred             cEEEECCCCC
Q psy2854         137 HVLINNAGVS  146 (384)
Q Consensus       137 d~lvnnAG~~  146 (384)
                      |++||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999974

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2774|consensus

Probab=97.99  E-value=1.1e-05  Score=69.88  Aligned_cols=174  Identities=16%  Similarity=0.179  Sum_probs=112.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CCE-EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL-KAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~-G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +-+...++|||+-|-+|..+|+.|..+ |-+ |++.+....  .+..-      ..+  -++-.|+-|..++++.+-.  
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP--p~~V~------~~G--PyIy~DILD~K~L~eIVVn--  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP--PANVT------DVG--PYIYLDILDQKSLEEIVVN--  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC--chhhc------ccC--CchhhhhhccccHHHhhcc--
Confidence            345678999999999999999988765 654 666443211  11110      011  2355788888887776532  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                         .+||.|||-.+.....     .+...-...++|+.|..++++.+..+-.++.+-|...++++..+-.+-..    ..
T Consensus       109 ---~RIdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPd----lt  176 (366)
T KOG2774|consen  109 ---KRIDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPD----LT  176 (366)
T ss_pred             ---cccceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCC----ee
Confidence               3899999986653221     22233345789999999999999888777666666655554332111111    11


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEe-cCcccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVC-PGWCYT  253 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~-PG~v~T  253 (384)
                      ...+...|+.||.-.+.+.+.+...+   |+.+.+.. ||.+..
T Consensus       177 IQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  177 IQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA  217 (366)
T ss_pred             eecCceeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence            11256789999998888888877765   77776664 777654

>PRK09620 hypothetical protein; Provisional

Probab=97.98  E-value=1.2e-05  Score=71.59  Aligned_cols=86  Identities=21%  Similarity=0.202  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC
Q psy2854          54 MEGKVCIITGAN----------------SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA  117 (384)
Q Consensus        54 ~~~k~vlITGas----------------~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs  117 (384)
                      ++||.|+||+|.                |-+|.++|++|+++|++|+++++.......   ...   .......+..|  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~---~~~~~~~V~s~--   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN---NQLELHPFEGI--   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC---CceeEEEEecH--
Confidence            468999999886                899999999999999999988764211110   000   01122333332  


Q ss_pred             CHHHHHHHHHHHHHhCCCccEEEECCCCCCCCC
Q psy2854         118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       118 ~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~  150 (384)
                        .++.+.++++.++ .++|++||+|++....+
T Consensus        73 --~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         73 --IDLQDKMKSIITH-EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             --HHHHHHHHHHhcc-cCCCEEEECccccceec
Confidence              2222233333221 26899999999965443

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.87  E-value=3.2e-05  Score=72.29  Aligned_cols=47  Identities=34%  Similarity=0.399  Sum_probs=40.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceE--EEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDV--CVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v--~~~~pg~~~t~l~~~~~  352 (384)
                      +..+|+.||.+...+++++++++.+.++.+  +++|||+|+|++.++.+
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~  222 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP  222 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc
Confidence            345799999999999999999998877655  45689999999998764

>PLN00106 malate dehydrogenase

Probab=97.87  E-value=0.00013  Score=68.32  Aligned_cols=159  Identities=13%  Similarity=-0.005  Sum_probs=97.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+.|.|||++|.+|..++..|+.+|.  ++++.++++  .+....++....  .  .....|+++.+++.+.       +
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--~--~~~i~~~~~~~d~~~~-------l   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--T--PAQVRGFLGDDQLGDA-------L   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--c--CceEEEEeCCCCHHHH-------c
Confidence            46899999999999999999997665  799999976  222223333221  1  1122354433333332       3


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcC-CCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFD-NLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~-~~~~~~~~~~~  211 (384)
                      ...|++|+.||.... +     -+.++..+..|......+.+.+.++-. ++++++|--.....+... .+....++   
T Consensus        85 ~~aDiVVitAG~~~~-~-----g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~---  155 (323)
T PLN00106         85 KGADLVIIPAGVPRK-P-----GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY---  155 (323)
T ss_pred             CCCCEEEEeCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC---
Confidence            478999999998432 1     234567888999988888888877754 566655532220000000 00001111   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhC
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYA  237 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~  237 (384)
                       ++...|+.++.-...|...++.++.
T Consensus       156 -p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        156 -DPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             -CcceEEEEecchHHHHHHHHHHHhC
Confidence             2456788888766678888888774

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.82  E-value=6.2e-05  Score=70.54  Aligned_cols=74  Identities=20%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-C-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL-K-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~-G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||+|.||..++++|+++ | .++++++|+.+++.+..+++.           ..|+.+   +.       
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~~---l~-------  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKILS---LE-------  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHHh---HH-------
Confidence            588999999999999999999999864 6 489999998776655444331           122221   22       


Q ss_pred             HhCCCccEEEECCCCCC
Q psy2854         131 KQYPKIHVLINNAGVSV  147 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~  147 (384)
                      +.+...|++|+.++...
T Consensus       211 ~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 EALPEADIVVWVASMPK  227 (340)
T ss_pred             HHHccCCEEEECCcCCc
Confidence            22346899999998743

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.81  E-value=0.00083  Score=56.38  Aligned_cols=158  Identities=15%  Similarity=0.106  Sum_probs=97.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .+-|.||||-.|..++++..++|+.|..+.||+.+....          ..+..++.|+.|++++.+.+.       +.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence            466889999999999999999999999999997665432          246678999999998765443       789


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++|..-|...+...     +..       ....-.+++.+.... .|+++++...+..-.+. ..+-....+     +-.
T Consensus        65 aVIsA~~~~~~~~~-----~~~-------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~f-----P~e  126 (211)
T COG2910          65 AVISAFGAGASDND-----ELH-------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDF-----PAE  126 (211)
T ss_pred             eEEEeccCCCCChh-----HHH-------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCC-----chh
Confidence            99998887432211     111       111222333333312 26777766544432221 111111111     333


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .|..+++..+.+ +.|+.+   .++..+-|+|.....|
T Consensus       127 y~~~A~~~ae~L-~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         127 YKPEALAQAEFL-DSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHHHHHH-HHHhhc---cCcceEEeCcHHhcCC
Confidence            456666554433 455555   3588888999877666

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.76  E-value=0.00012  Score=66.79  Aligned_cols=44  Identities=11%  Similarity=-0.125  Sum_probs=40.7

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.|++++.++||+||+|+||+++|++.+.
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  200 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA  200 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc
Confidence            45799999999999999999999999999999999999998653

>KOG1611|consensus

Probab=97.73  E-value=1.1e-05  Score=69.55  Aligned_cols=45  Identities=27%  Similarity=0.368  Sum_probs=41.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      +..+|..||.|.-+++|+++-.|.+.+|.|.++|||||+|+|...
T Consensus       167 ~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  167 GLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             chhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence            446899999999999999999999999999999999999999874

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.73  E-value=0.00026  Score=66.24  Aligned_cols=119  Identities=14%  Similarity=-0.007  Sum_probs=79.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+.+.|||++|.+|..++..|+.+|  .++++.+++  +.+....++....  .  .....+.+|+.+..+.+     
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~--~--~~~v~~~td~~~~~~~l-----   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID--T--PAKVTGYADGELWEKAL-----   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC--c--CceEEEecCCCchHHHh-----
Confidence            455689999999999999999999655  579999983  3333333444321  1  22345666654432222     


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSL  191 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~  191 (384)
                        ...|++|++||....      +.+.+...+..|+...-.+.+.+.++-. ++|+++|.-
T Consensus        75 --~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNP  127 (321)
T PTZ00325         75 --RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNP  127 (321)
T ss_pred             --CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence              378999999998422      1234566889999998888888877753 677777653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.69  E-value=3.6e-05  Score=72.55  Aligned_cols=47  Identities=34%  Similarity=0.499  Sum_probs=41.8

Q ss_pred             CCccccccccccccchHHHHHHhhc-CCceEEEeecCce-eccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWC-YTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~-~t~l~~~~~  352 (384)
                      +..+|+.||+++.++++++++++.+ +||+++++|||.| .|++.|+.+
T Consensus       189 ~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        189 PGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             ccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence            4567999999999999999999954 6899999999999 699998864

>PLN00015 protochlorophyllide reductase

Probab=97.67  E-value=3.8e-05  Score=71.94  Aligned_cols=46  Identities=30%  Similarity=0.478  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhc-CCceEEEeecCce-eccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWC-YTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~-~t~l~~~~  351 (384)
                      ...+|+.||.++.++++++++++.+ .||+|+++|||+| .|++.+..
T Consensus       181 ~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~  228 (308)
T PLN00015        181 GAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREH  228 (308)
T ss_pred             HHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccc
Confidence            3457999999999999999999965 6999999999999 79998753

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.64  E-value=0.0003  Score=64.58  Aligned_cols=77  Identities=19%  Similarity=0.407  Sum_probs=55.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++...   +.......|     +.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~---~~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY---GEIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc---CceEEechh-----hh---------cc
Confidence            45789999998 69999999999999999999999988777766665331   122222111     10         12


Q ss_pred             CCccEEEECCCCCCC
Q psy2854         134 PKIHVLINNAGVSVP  148 (384)
Q Consensus       134 g~id~lvnnAG~~~~  148 (384)
                      ...|++||+.+..+.
T Consensus       177 ~~~DivInatp~gm~  191 (270)
T TIGR00507       177 HRVDLIINATSAGMS  191 (270)
T ss_pred             cCccEEEECCCCCCC
Confidence            368999999988543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.63  E-value=4.2e-05  Score=71.86  Aligned_cols=46  Identities=33%  Similarity=0.479  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhc-CCceEEEeecCce-eccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWC-YTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~-~t~l~~~~  351 (384)
                      ...+|+.||.++.+++++|++++.+ .||+++++|||+| +|+|.++.
T Consensus       185 ~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       185 GAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             hhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence            4467999999999999999999853 6899999999999 79998763

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.00029  Score=58.68  Aligned_cols=76  Identities=22%  Similarity=0.392  Sum_probs=54.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.++..+++...       .+..+.++.++.          
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc----------
Confidence            56789999998 899999999999996 78999999987766655554321       022344443322          


Q ss_pred             CCCccEEEECCCCCC
Q psy2854         133 YPKIHVLINNAGVSV  147 (384)
Q Consensus       133 ~g~id~lvnnAG~~~  147 (384)
                      ....|++|++.+...
T Consensus        79 ~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 LAEADLIINTTPVGM   93 (155)
T ss_pred             cccCCEEEeCcCCCC
Confidence            247899999997643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4039|consensus

Probab=97.63  E-value=0.00064  Score=56.57  Aligned_cols=167  Identities=17%  Similarity=0.135  Sum_probs=103.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .|+++.++|.||+|-.|..+.+++++.+-  +|+++.|...-..+.         +..+.....|.+..++...      
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~------   79 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLAT------   79 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHh------
Confidence            36788999999999999999999999874  699998874211111         2355566777766554432      


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                       .+..+|+++++-|......       +.+..+.+..--.+.+.+++...- +.++.+||..+...              
T Consensus        80 -~~qg~dV~FcaLgTTRgka-------GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s--------------  137 (238)
T KOG4039|consen   80 -NEQGPDVLFCALGTTRGKA-------GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS--------------  137 (238)
T ss_pred             -hhcCCceEEEeeccccccc-------ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------------
Confidence             3348999999988754322       122233344333444555554443 36888888765432              


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHH
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK  266 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~  266 (384)
                          ....|-..|.-++.=...|.-+      ++...+||.+..+-...-..+|.-+
T Consensus       138 ----SrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~esr~geflg~  184 (238)
T KOG4039|consen  138 ----SRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERTESRQGEFLGN  184 (238)
T ss_pred             ----cceeeeeccchhhhhhhhcccc------EEEEecCcceecccccccccchhhh
Confidence                3345777787666544433222      6778899988655433333334333

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.60  E-value=0.00029  Score=63.85  Aligned_cols=44  Identities=16%  Similarity=-0.037  Sum_probs=40.7

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.|+.+++++||+||+|+||+++|++.+.
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence            35799999999999999999999999999999999999998654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.60  E-value=0.00058  Score=60.17  Aligned_cols=49  Identities=24%  Similarity=0.352  Sum_probs=44.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCChh
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIK  354 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~~~  354 (384)
                      ....||.+|.+...+.+-|.+++.+++|+|++++||.|.|.++.+..++
T Consensus       149 ~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~  197 (246)
T COG4221         149 GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE  197 (246)
T ss_pred             CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC
Confidence            4567999999999999999999999999999999999999888776643

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.60  E-value=0.00026  Score=64.39  Aligned_cols=44  Identities=14%  Similarity=-0.084  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  201 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG  201 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh
Confidence            35799999999999999999999999999999999999998654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.58  E-value=0.00027  Score=64.91  Aligned_cols=44  Identities=16%  Similarity=-0.041  Sum_probs=40.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|++++.++||+||+|+||+++|++.+.
T Consensus       156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~  199 (271)
T PRK06505        156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG  199 (271)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc
Confidence            35799999999999999999999999999999999999998654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.57  E-value=0.00033  Score=64.52  Aligned_cols=78  Identities=22%  Similarity=0.359  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.++..+++...   ..+.   .++ +   .       .+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~---~~~~---~~~-~---~-------~~  181 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL---GKAE---LDL-E---L-------QE  181 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc---ccee---ecc-c---c-------hh
Confidence            467899999997 899999999999999 68999999988777666655321   1111   111 0   1       11


Q ss_pred             hCCCccEEEECCCCCCC
Q psy2854         132 QYPKIHVLINNAGVSVP  148 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~  148 (384)
                      .....|++||+......
T Consensus       182 ~~~~~DivInaTp~g~~  198 (278)
T PRK00258        182 ELADFDLIINATSAGMS  198 (278)
T ss_pred             ccccCCEEEECCcCCCC
Confidence            22468999999876543

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.57  E-value=0.00034  Score=69.08  Aligned_cols=80  Identities=20%  Similarity=0.273  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++|||+++ +|.++|+.|++.|++|++.+++........+++.+.    .+.+...+  +..++   .    . 
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~----g~~~~~~~--~~~~~---~----~-   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE----GIKVICGS--HPLEL---L----D-   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc----CCEEEeCC--CCHHH---h----c-
Confidence            46789999999976 999999999999999999988764434444444332    22222211  12211   1    1 


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                       ..+|++|+++|+...
T Consensus        67 -~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 -EDFDLMVKNPGIPYT   81 (447)
T ss_pred             -CcCCEEEECCCCCCC
Confidence             148999999998543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.57  E-value=0.00098  Score=62.13  Aligned_cols=149  Identities=14%  Similarity=0.147  Sum_probs=84.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+|+++++|.++++.+.+.|.+|++++++.++.+..    .+ . +..   ..+|..+.+..+.+.+.. . .+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-~-g~~---~~~~~~~~~~~~~~~~~~-~-~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQ-A-GAD---AVFNYRAEDLADRILAAT-A-GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC---EEEeCCCcCHHHHHHHHc-C-CC
Confidence            478999999999999999999999999999999886554332    21 1 111   224555554444433222 1 23


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCC-CCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDN-LNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~-~~~~~~~~~~~~  213 (384)
                      .+|++++++|...           .+..           .+ .++...+++.+++.. ......... +.......    
T Consensus       213 ~~d~vi~~~~~~~-----------~~~~-----------~~-~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~----  264 (325)
T cd08253         213 GVDVIIEVLANVN-----------LAKD-----------LD-VLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIR----  264 (325)
T ss_pred             ceEEEEECCchHH-----------HHHH-----------HH-hhCCCCEEEEEeecC-CcCCCChhHHHhcCceEE----
Confidence            6999999987410           0101           01 222334677776643 111111111 00000111    


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcE
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVD  242 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~  242 (384)
                      +...|..+|.....+.+.+...+....++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         265 GVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             eeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            23357777887777777777666554444

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.56  E-value=0.00027  Score=64.36  Aligned_cols=44  Identities=14%  Similarity=-0.111  Sum_probs=40.7

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|+.++.++||+||+|+||+++|++.+.
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~  201 (258)
T PRK07370        158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA  201 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc
Confidence            35799999999999999999999999999999999999998754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.51  E-value=0.00042  Score=63.00  Aligned_cols=44  Identities=16%  Similarity=-0.025  Sum_probs=40.4

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.|++++.++||+||+|+||+++|++.+..
T Consensus       156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~  199 (256)
T PRK07889        156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI  199 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc
Confidence            45899999999999999999999999999999999999987643

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.50  E-value=0.00051  Score=62.60  Aligned_cols=45  Identities=13%  Similarity=-0.102  Sum_probs=40.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.|+++++++||+||+|+||+++|++.+.
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~  199 (260)
T PRK06997        155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG  199 (260)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc
Confidence            345799999999999999999999999999999999999987654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.49  E-value=0.00043  Score=69.52  Aligned_cols=47  Identities=30%  Similarity=0.475  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL  100 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l  100 (384)
                      ++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.++..+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            578899999999 69999999999999999999999877666655443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.48  E-value=0.0046  Score=55.08  Aligned_cols=150  Identities=13%  Similarity=0.087  Sum_probs=85.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++.+.                   .|.+...+.+.+..+..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            466778999985 7999999999999998 688887653                   2334444455555455556555


Q ss_pred             EeecCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCccc
Q psy2854         113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLM  192 (384)
Q Consensus       113 ~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~  192 (384)
                      ...++. ++...++      ..+.|++|.+...                     ...-..+.+.+...-..+|...+..+
T Consensus        87 ~~~i~~-~~~~~l~------~~~~D~VvdaiD~---------------------~~~k~~L~~~c~~~~ip~I~s~g~g~  138 (231)
T cd00755          87 EEFLTP-DNSEDLL------GGDPDFVVDAIDS---------------------IRAKVALIAYCRKRKIPVISSMGAGG  138 (231)
T ss_pred             eeecCH-hHHHHHh------cCCCCEEEEcCCC---------------------HHHHHHHHHHHHHhCCCEEEEeCCcC
Confidence            555542 2333222      1247777776432                     11222344555555445555444333


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcE--EEEEe
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVD--VSVVC  247 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~--v~~v~  247 (384)
                      ...+..+                ..=.-+|.-..-+++.+++++++.||.  +.+|.
T Consensus       139 ~~dp~~i----------------~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         139 KLDPTRI----------------RVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             CCCCCeE----------------EEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            2211100                011112333345889999999988885  55554

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.44  E-value=0.00057  Score=62.88  Aligned_cols=44  Identities=16%  Similarity=-0.039  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|++++..+||+||+|+||+++|++.+.
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG  197 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc
Confidence            35699999999999999999999999999999999999987654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.43  E-value=0.00058  Score=62.12  Aligned_cols=45  Identities=18%  Similarity=-0.006  Sum_probs=41.2

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.|+.++.++||+||+|+||+++|++.+..
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~  203 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI  203 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc
Confidence            346999999999999999999999999999999999999997653

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.41  E-value=0.0057  Score=55.61  Aligned_cols=37  Identities=19%  Similarity=0.235  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRS   89 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~   89 (384)
                      ..+++..|+|.|+ ||+|.++|+.|++.| -++.+++.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3577888999985 799999999999999 468888765

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.00078  Score=60.89  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=40.9

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++.++||+||+|+||++.|++.++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh
Confidence            35799999999999999999999999999999999999998764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.37  E-value=0.00079  Score=61.84  Aligned_cols=44  Identities=14%  Similarity=-0.096  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|+.++.++||+||+|+||+++|++.+.
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  202 (272)
T PRK08159        159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG  202 (272)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc
Confidence            35699999999999999999999999999999999999987653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.33  E-value=0.00062  Score=63.43  Aligned_cols=42  Identities=10%  Similarity=-0.061  Sum_probs=39.4

Q ss_pred             cccccccccccchHHHHHHhhc-CCceEEEeecCceecccccc
Q psy2854         309 AYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       309 ~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~  350 (384)
                      .|+.||.+...+++.|+.++.+ +||+||+|+||+++|++.+.
T Consensus       192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            6999999999999999999986 79999999999999999775

>PRK05599 hypothetical protein; Provisional

Probab=97.33  E-value=0.0011  Score=59.86  Aligned_cols=46  Identities=17%  Similarity=0.151  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.|++++.++||+|++++||+++|++.+..
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~  191 (246)
T PRK05599        146 ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM  191 (246)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC
Confidence            3457999999999999999999999999999999999999987643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.32  E-value=0.00051  Score=61.75  Aligned_cols=44  Identities=30%  Similarity=0.246  Sum_probs=40.7

Q ss_pred             CccccccccccccchHHHHHHhhc-CCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.+|.+...+++.||++|.+ +||+||+|.||+++|++.+.
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~  188 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER  188 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc
Confidence            347999999999999999999999 99999999999999998764

...

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.29  E-value=0.00061  Score=61.68  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=40.9

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.++++++++||+||+|+||++.|++.+.
T Consensus       153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~  196 (251)
T PRK12481        153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAA  196 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhh
Confidence            45799999999999999999999999999999999999998764

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0001  Score=67.78  Aligned_cols=43  Identities=23%  Similarity=0.240  Sum_probs=40.1

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ..+|+.||.+...+++.+++++.++||+||+|+||+++|++.+
T Consensus       166 ~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~  208 (275)
T PRK06940        166 LHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ  208 (275)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence            3579999999999999999999999999999999999999865

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.28  E-value=0.00028  Score=60.53  Aligned_cols=81  Identities=22%  Similarity=0.214  Sum_probs=49.3

Q ss_pred             CCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC
Q psy2854          54 MEGKVCIITGAN----------------SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA  117 (384)
Q Consensus        54 ~~~k~vlITGas----------------~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs  117 (384)
                      ++||.||||+|.                |-.|.++|++++.+|++|+++..... ...          ...+.  ..++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~--~i~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVK--VIRVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEE--EEE-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccce--EEEec
Confidence            468888888864                67899999999999999998877531 110          12343  34566


Q ss_pred             CHHHHHHHHHHHHHhCCCccEEEECCCCCCCCC
Q psy2854         118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       118 ~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~  150 (384)
                      +.++..+.+.+.   ...-|++|++|.+....+
T Consensus        68 sa~em~~~~~~~---~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   68 SAEEMLEAVKEL---LPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             SHHHHHHHHHHH---GGGGSEEEE-SB--SEEE
T ss_pred             chhhhhhhhccc---cCcceeEEEecchhheee
Confidence            666655555544   445599999999965443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.28  E-value=0.002  Score=60.93  Aligned_cols=84  Identities=18%  Similarity=0.342  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHHHhcCCcE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM---------------------IRGQEALEKLKKEVQDGQI  109 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~  109 (384)
                      ..+++++|+|.|+ ||+|.++|+.|++.|. ++.+++++.                     .|.+.+.+.+++..+..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            3578899999996 7899999999999998 799898874                     2455556667666666777


Q ss_pred             EEEEeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       110 ~~~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ..+..|++. +.+++++       ...|++|.+..
T Consensus        99 ~~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            778778763 3444432       35798887763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.24  E-value=0.00096  Score=60.84  Aligned_cols=46  Identities=9%  Similarity=-0.226  Sum_probs=41.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~  201 (261)
T PRK08690        156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI  201 (261)
T ss_pred             CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC
Confidence            3457999999999999999999999999999999999999986643

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.22  E-value=0.015  Score=47.60  Aligned_cols=106  Identities=13%  Similarity=0.048  Sum_probs=70.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .+.|+|++|.+|.++|..|...|.  ++++.++++++.+....++............... .+.+++           ..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~~-----------~~   69 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEAL-----------KD   69 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGGG-----------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cccccc-----------cc
Confidence            578999999999999999998864  6999999988888888887665322222211111 333322           37


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                      -|++|..||... .+-  .+   -.+.++.|..-.-.+.+.+.++-
T Consensus        70 aDivvitag~~~-~~g--~s---R~~ll~~N~~i~~~~~~~i~~~~  109 (141)
T PF00056_consen   70 ADIVVITAGVPR-KPG--MS---RLDLLEANAKIVKEIAKKIAKYA  109 (141)
T ss_dssp             ESEEEETTSTSS-STT--SS---HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccEEEEeccccc-ccc--cc---HHHHHHHhHhHHHHHHHHHHHhC
Confidence            899999999842 211  12   33456777766656666555554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.22  E-value=0.0023  Score=59.06  Aligned_cols=50  Identities=18%  Similarity=0.166  Sum_probs=43.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKE  103 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~  103 (384)
                      +.++|.++|.|+ ||.|++++..|++.|+ +|++++|+.++.++..+++...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            456789999996 8899999999999998 6999999998888887777554

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.19  E-value=0.0014  Score=61.77  Aligned_cols=105  Identities=12%  Similarity=-0.005  Sum_probs=62.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-------CEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLK-------ATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G-------~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .++||||+|.+|.+++..|+..|       .+|++.+++..  +++....++...     ......|+....+.      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~------   72 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDP------   72 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCH------
Confidence            58999999999999999999854       58999999642  122211111110     00011122222222      


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                       .+.+.+.|++|+.||.....   ..+.   .+.++.|+.-.-.+.+.+.++
T Consensus        73 -~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          73 -EEAFKDVDVAILVGAMPRKE---GMER---KDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             -HHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh
Confidence             22334799999999984321   1122   456778887666666666666

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08589 short chain dehydrogenase; Validated

Probab=97.15  E-value=0.0014  Score=60.14  Aligned_cols=44  Identities=20%  Similarity=0.342  Sum_probs=40.9

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++.++||+||+|+||+++|++.++
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        151 RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDK  194 (272)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhh
Confidence            45799999999999999999999999999999999999998765

>PRK06196 oxidoreductase; Provisional

Probab=97.14  E-value=0.0002  Score=67.19  Aligned_cols=47  Identities=36%  Similarity=0.327  Sum_probs=42.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++++++++.+.||++++|+||++.|++.++.+
T Consensus       177 ~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~  223 (315)
T PRK06196        177 KWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLP  223 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCC
Confidence            34579999999999999999999889999999999999999987653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.13  E-value=0.00048  Score=60.14  Aligned_cols=46  Identities=24%  Similarity=0.342  Sum_probs=39.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALE   98 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   98 (384)
                      .+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.++.++..+
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46899999999985 89999999999999999999998665554433

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06849 hypothetical protein; Provisional

Probab=97.12  E-value=0.0042  Score=60.20  Aligned_cols=83  Identities=17%  Similarity=0.114  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +.|+|||||++.++|..+++.|.+.|++|++++.+..........+      .+...+...-.+.+...+.+.++.+++ 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            3589999999999999999999999999999988754332211111      122222212234444444444555554 


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899998765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.10  E-value=0.0011  Score=60.53  Aligned_cols=45  Identities=13%  Similarity=-0.119  Sum_probs=40.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.++.++.++||+||+|+||+++|++.+.
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~  199 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  199 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc
Confidence            345799999999999999999999999999999999999987653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.09  E-value=0.0024  Score=57.90  Aligned_cols=44  Identities=23%  Similarity=0.206  Sum_probs=40.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++++++++.++||.|++|+||+++|++..
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~  207 (256)
T PRK12859        164 GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT  207 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC
Confidence            45679999999999999999999999999999999999998643

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.08  E-value=0.005  Score=58.10  Aligned_cols=77  Identities=25%  Similarity=0.344  Sum_probs=50.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC-
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP-  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g-  134 (384)
                      |+++||+||+||+|...++-..+.|++++++..+.++.+ ..+++     +..   ...|..+.+    +.+++++..+ 
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc----HHHHHHHHcCC
Confidence            899999999999999988888888977666666544433 33322     221   123344433    4445544333 


Q ss_pred             -CccEEEECCCC
Q psy2854         135 -KIHVLINNAGV  145 (384)
Q Consensus       135 -~id~lvnnAG~  145 (384)
                       .+|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             59999999885

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.07  E-value=0.0042  Score=54.31  Aligned_cols=84  Identities=15%  Similarity=0.250  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHHHhcCCcEEE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS-------------------MIRGQEALEKLKKEVQDGQIVL  111 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  111 (384)
                      ..+++++|+|.| .||+|.++++.|+..|. ++.+++++                   ..|.+...+.+++..+..++..
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            357888999999 58999999999999998 79998877                   2345555666666555555655


Q ss_pred             EEeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       112 ~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      +..++++ +++.++       +.+.|++|.+..
T Consensus        96 ~~~~i~~-~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVTA-ENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             ehhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence            5555543 233322       236788887753

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.05  E-value=0.0028  Score=58.05  Aligned_cols=82  Identities=23%  Similarity=0.288  Sum_probs=58.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +.+|+.++|.|| ||-+++++..|++.|+ +|+++.|+.++.++..+.+.+..  ..+  ...+..+.+..+        
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~--~~~--~~~~~~~~~~~~--------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG--AAV--EAAALADLEGLE--------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ccc--cccccccccccc--------
Confidence            456899999996 8999999999999996 69999999999888877775542  111  112222222111        


Q ss_pred             hCCCccEEEECCCCCCCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~  150 (384)
                         ..|++||+....+..+
T Consensus       190 ---~~dliINaTp~Gm~~~  205 (283)
T COG0169         190 ---EADLLINATPVGMAGP  205 (283)
T ss_pred             ---ccCEEEECCCCCCCCC
Confidence               4799999988766544

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.04  E-value=0.0043  Score=57.15  Aligned_cols=82  Identities=13%  Similarity=0.200  Sum_probs=56.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +.++|+++|-|| ||-|++++..|++.|+ +|+++.|+.++.++..+.+....+...+  ...|   ..+..+..     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~--~~~~---~~~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV--VGVD---ARGIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE--EecC---HhHHHHHH-----
Confidence            356889999997 8999999999999997 6999999988888777766433211111  1122   22221111     


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                        ...|++||+..+.+
T Consensus       193 --~~~divINaTp~Gm  206 (283)
T PRK14027        193 --AAADGVVNATPMGM  206 (283)
T ss_pred             --hhcCEEEEcCCCCC
Confidence              25799999987654

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0022  Score=58.02  Aligned_cols=46  Identities=26%  Similarity=0.239  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++|+||+++|++.++.
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        153 GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence            4467999999999999999999999999999999999999988754

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0012  Score=60.17  Aligned_cols=44  Identities=16%  Similarity=0.064  Sum_probs=40.2

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.+|.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence            34699999999999999999999999999999999999998653

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.02  E-value=0.0024  Score=60.50  Aligned_cols=81  Identities=16%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+|++|..+++.+...|++|+.++++.++.+...+.+     +.. .  ..|..+.++..+.+.+.. . +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~--vi~~~~~~~~~~~i~~~~-~-~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-D--AFNYKEEPDLDAALKRYF-P-N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-e--eEEcCCcccHHHHHHHhC-C-C
Confidence            4789999999999999999888889999999888865544332212     211 1  123322223333333322 1 4


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|+++++.|.
T Consensus       221 gvd~v~d~~g~  231 (338)
T cd08295         221 GIDIYFDNVGG  231 (338)
T ss_pred             CcEEEEECCCH
Confidence            79999998873

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.01  E-value=0.0015  Score=59.79  Aligned_cols=76  Identities=24%  Similarity=0.218  Sum_probs=60.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ...+|-||+|--|.-+|++|+++|.+-.+.+||..++....+.+     +.+...+.+++  ++.+++.++       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------cc
Confidence            46899999999999999999999999999999988888777766     34444455554  555555443       67


Q ss_pred             cEEEECCCCC
Q psy2854         137 HVLINNAGVS  146 (384)
Q Consensus       137 d~lvnnAG~~  146 (384)
                      ++|+||+|..
T Consensus        73 ~VVlncvGPy   82 (382)
T COG3268          73 QVVLNCVGPY   82 (382)
T ss_pred             eEEEeccccc
Confidence            9999999974

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.003  Score=59.43  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+..    .. . +..   ...|..+.+..+.+.+...  .+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~-~-~~~---~~~~~~~~~~~~~~~~~~~--~~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KE-L-GAD---YVIDYRKEDFVREVRELTG--KR  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC---eEEecCChHHHHHHHHHhC--CC
Confidence            467999999999999999999999999999999886554432    11 1 111   2246666555555444332  23


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            69999999984

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.01  E-value=0.00025  Score=63.87  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=40.4

Q ss_pred             CccccccccccccchHHHH-HHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELY-LKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela-~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.++ +.+.++||+||+|+||+++|++.++
T Consensus       134 ~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        134 ATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence            3579999999999999999 8888899999999999999999765

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.99  E-value=0.006  Score=58.53  Aligned_cols=76  Identities=21%  Similarity=0.201  Sum_probs=53.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.++.++|.|+ |.+|+..++.+.+.|++|++++|+.++.+....    .. +..   +..+..+.+++.+.+       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~----~~-g~~---v~~~~~~~~~l~~~l-------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA----EF-GGR---IHTRYSNAYEIEDAV-------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----hc-Cce---eEeccCCHHHHHHHH-------
Confidence            45677899987 799999999999999999999998766544332    21 111   233455555544433       


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      ...|++|+++++
T Consensus       229 ~~aDvVI~a~~~  240 (370)
T TIGR00518       229 KRADLLIGAVLI  240 (370)
T ss_pred             ccCCEEEEcccc
Confidence            357999999876

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.00025  Score=66.28  Aligned_cols=42  Identities=19%  Similarity=0.282  Sum_probs=39.5

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ..|+.||.+...+++.|++++.++||+||+|+||+++|++.+
T Consensus       173 ~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        173 VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            469999999999999999999999999999999999999864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.97  E-value=0.0024  Score=57.96  Aligned_cols=45  Identities=16%  Similarity=-0.001  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|++++.++||+||+|+||+++|++.|.
T Consensus       147 ~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~  191 (259)
T PRK08340        147 PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARE  191 (259)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHH
Confidence            345799999999999999999999999999999999999998763

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0003  Score=62.57  Aligned_cols=44  Identities=14%  Similarity=0.105  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.+++++.++||+||+|+||+++|++.++
T Consensus       137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~  180 (223)
T PRK05884        137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG  180 (223)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh
Confidence            35799999999999999999999999999999999999997654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.95  E-value=0.0021  Score=59.86  Aligned_cols=42  Identities=12%  Similarity=-0.039  Sum_probs=38.9

Q ss_pred             cccccccccccchHHHHHHhhc-CCceEEEeecCceecccccc
Q psy2854         309 AYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       309 ~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~  350 (384)
                      .|+.||.+...+++.|+.++.+ +||+||+|+||+++|++.+.
T Consensus       191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~  233 (299)
T PRK06300        191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA  233 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc
Confidence            6999999999999999999987 59999999999999998764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.95  E-value=0.0048  Score=56.94  Aligned_cols=80  Identities=19%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|.++|.|+ ||.|++++..|++.|+ +|+++.|+.++.++..+++...   ..+.    .+...++..       +
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~----~~~~~~~~~-------~  186 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT----RLEGDSGGL-------A  186 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce----eccchhhhh-------h
Confidence            357889999986 9999999999999997 6999999988877776655321   1111    111111111       1


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                      .....|++||+.....
T Consensus       187 ~~~~~DiVInaTp~g~  202 (282)
T TIGR01809       187 IEKAAEVLVSTVPADV  202 (282)
T ss_pred             cccCCCEEEECCCCCC
Confidence            2246899999987754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.94  E-value=0.012  Score=55.07  Aligned_cols=111  Identities=12%  Similarity=0.077  Sum_probs=69.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          58 VCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+.|.|+ |++|.++|..|+..|  .+|++++|+.++.+....++.....  ........   .+.++           .
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------l   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------C   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------h
Confidence            5778886 899999999999999  4799999999988888887765431  11222221   22221           1


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGS  189 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS  189 (384)
                      ...|++|+++|.... +  ..+.   ...++.|..-...+.+.+.++-.  .++++|-
T Consensus        67 ~~aDIVIitag~~~~-~--g~~R---~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          67 KDADIVVITAGAPQK-P--GETR---LDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCCCEEEEccCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            378999999997422 2  1122   23566666555555555544332  3455543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.94  E-value=0.0004  Score=63.23  Aligned_cols=45  Identities=16%  Similarity=0.003  Sum_probs=41.1

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.|++++..+||+|++|+||+++|++.+..
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~  206 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF  206 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc
Confidence            347999999999999999999999999999999999999987643

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.93  E-value=0.0074  Score=57.12  Aligned_cols=83  Identities=16%  Similarity=0.306  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHHHhcCCcE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM---------------------IRGQEALEKLKKEVQDGQI  109 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~  109 (384)
                      ..++.++|+|.|+ ||+|..+|+.|++.|. ++.+++++.                     .|.+.+.+.+++..+..++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            3577889999998 8999999999999999 799998863                     2334444555554445556


Q ss_pred             EEEEeecCCHHHHHHHHHHHHHhCCCccEEEECC
Q psy2854         110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNA  143 (384)
Q Consensus       110 ~~~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnA  143 (384)
                      ..+..|++. +.+.+++       .+.|++|.+.
T Consensus        99 ~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (339)
T PRK07688         99 EAIVQDVTA-EELEELV-------TGVDLIIDAT  124 (339)
T ss_pred             EEEeccCCH-HHHHHHH-------cCCCEEEEcC
Confidence            666666653 3333332       2568777774

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0032  Score=57.14  Aligned_cols=45  Identities=24%  Similarity=0.265  Sum_probs=40.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        154 GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTED  198 (260)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhh
Confidence            345799999999999999999999999999999999999998654

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.91  E-value=0.0032  Score=60.01  Aligned_cols=81  Identities=16%  Similarity=0.120  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+|++|...++.....|++|+.++++.++.+...+++     +...   ..|..+.++..+.+.+..  .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~---vi~~~~~~~~~~~i~~~~--~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE---AFNYKEEPDLDAALKRYF--PE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE---EEECCCcccHHHHHHHHC--CC
Confidence            4789999999999999999888888999998888765544332222     2211   223332223333333321  13


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|+++.+.|.
T Consensus       228 gvD~v~d~vG~  238 (348)
T PLN03154        228 GIDIYFDNVGG  238 (348)
T ss_pred             CcEEEEECCCH
Confidence            69999999873

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.91  E-value=0.0036  Score=58.95  Aligned_cols=43  Identities=26%  Similarity=0.406  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.|+.++.++||.|++++||+++|++.+
T Consensus       205 ~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        205 YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            4579999999999999999999999999999999999999876

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.86  E-value=0.0035  Score=58.98  Aligned_cols=80  Identities=16%  Similarity=0.152  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+++|+||+|++|..+++.+...|++|+.++++.++.+.. +++     +...   ..|..+.+...+..+...  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDV---AFNYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCE---EEeccccccHHHHHHHhC--CC
Confidence            478999999999999999988888899999988886553333 222     2211   223333333444333332  13


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|+++.+.|.
T Consensus       207 gvdvv~d~~G~  217 (325)
T TIGR02825       207 GYDCYFDNVGG  217 (325)
T ss_pred             CeEEEEECCCH
Confidence            69999998874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0046  Score=55.79  Aligned_cols=45  Identities=18%  Similarity=0.143  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+.+.+++++..+||+|++++||.++|++.+.
T Consensus       154 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~  198 (252)
T PRK07035        154 FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA  198 (252)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc
Confidence            445799999999999999999999999999999999999998764

>KOG0725|consensus

Probab=96.85  E-value=0.0036  Score=57.28  Aligned_cols=40  Identities=33%  Similarity=0.336  Sum_probs=39.0

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccc
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNL  347 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l  347 (384)
                      .+|+.||.+...++|.||.++.++||+||+|.||.++|++
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            5899999999999999999999999999999999999999

>KOG4169|consensus

Probab=96.84  E-value=0.00043  Score=60.03  Aligned_cols=46  Identities=30%  Similarity=0.359  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHh--hcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKY--ADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l--~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+.|++||...+.|+|.||...  ...||.++.+|||+++|+|.++.
T Consensus       146 ~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  146 VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHH
Confidence            55789999999999999999864  55799999999999999998875

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.84  E-value=0.0048  Score=57.28  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.. +++     +..   ...|..+.+..+.+.+ ... .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~-~~~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKE-ATG-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHH-HhC-CC
Confidence            467999999999999999999999999999998876544333 221     111   2244444333333322 211 24


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999984

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05086 malate dehydrogenase; Provisional

Probab=96.84  E-value=0.0042  Score=58.12  Aligned_cols=113  Identities=16%  Similarity=0.046  Sum_probs=65.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHH-C--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEe-ecCCHHHHHHHHHHHHHh
Q psy2854          57 KVCIITGANSGIGYETAKELAK-L--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL-NLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~-~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dvs~~~~v~~~~~~i~~~  132 (384)
                      +.++|.||+|++|.+++..+.. .  +..+++.+|++. .+....++...   .....+.. +-+|   +.       +.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~---~~~~~i~~~~~~d---~~-------~~   66 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI---PTAVKIKGFSGED---PT-------PA   66 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC---CCCceEEEeCCCC---HH-------HH
Confidence            3688999999999999998865 2  456888888743 21111122210   11111221 2122   11       12


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGS  189 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS  189 (384)
                      ....|++|.++|......      +.-...+..|....-.+.+.+.++-. +++.+.|
T Consensus        67 l~~~DiVIitaG~~~~~~------~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         67 LEGADVVLISAGVARKPG------MDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             cCCCCEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            236999999999843211      12234677788777777777766633 5555544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.83  E-value=0.0044  Score=56.10  Aligned_cols=44  Identities=23%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++...||+|+.++||+++|++.+.
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        149 TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence            45699999999999999999999899999999999999998753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.81  E-value=0.0052  Score=59.69  Aligned_cols=77  Identities=16%  Similarity=0.258  Sum_probs=54.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++|.|+ ||+|+.+++.|+++|+ +++++.|+.++.++..+++    +..  .     +...++..       
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~~--~-----~~~~~~l~-------  237 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RNA--S-----AHYLSELP-------  237 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cCC--e-----EecHHHHH-------
Confidence            3578999999998 9999999999999996 6999999977665554443    111  1     11122222       


Q ss_pred             HhCCCccEEEECCCCCC
Q psy2854         131 KQYPKIHVLINNAGVSV  147 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~  147 (384)
                      +.....|++||+.+...
T Consensus       238 ~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        238 QLIKKADIIIAAVNVLE  254 (414)
T ss_pred             HHhccCCEEEECcCCCC
Confidence            22346899999998643

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.81  E-value=0.0043  Score=56.16  Aligned_cols=45  Identities=22%  Similarity=0.288  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||.||.++||+++|++.+.
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~  198 (253)
T PRK08993        154 RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ  198 (253)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh
Confidence            345799999999999999999999999999999999999998764

>PRK12743 oxidoreductase; Provisional

Probab=96.80  E-value=0.005  Score=55.81  Aligned_cols=45  Identities=22%  Similarity=0.209  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.+|.+...+++.+++++...||+++.|+||.++|++.+.
T Consensus       149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~  193 (256)
T PRK12743        149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM  193 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence            445799999999999999999999999999999999999998764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.79  E-value=0.0035  Score=56.64  Aligned_cols=44  Identities=30%  Similarity=0.456  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|++||....-|++-|+.+|.+.||.|.+|+||.++|+++.
T Consensus       152 ~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         152 YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            34469999999999999999999999999999999999999996

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0054  Score=55.83  Aligned_cols=45  Identities=22%  Similarity=0.397  Sum_probs=40.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.++.++.++||++|+|+||+++|++.++
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        146 GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh
Confidence            345799999999999999999999899999999999999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0059  Score=55.57  Aligned_cols=43  Identities=21%  Similarity=0.138  Sum_probs=39.7

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.+|.+...+++.+++++.++||+|++++||+++|++++
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWR  198 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhh
Confidence            3579999999999999999999999999999999999999865

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.00076  Score=59.90  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+++|++++++||+++|++.+.
T Consensus       143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            345699999999999999999999999999999999999999764

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.00058  Score=61.82  Aligned_cols=43  Identities=26%  Similarity=0.413  Sum_probs=40.3

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP  201 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence            4699999999999999999999999999999999999998764

>PRK06128 oxidoreductase; Provisional

Probab=96.76  E-value=0.0059  Score=56.88  Aligned_cols=44  Identities=30%  Similarity=0.338  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++.+.||+||+|+||+++|++...
T Consensus       202 ~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~  245 (300)
T PRK06128        202 LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS  245 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc
Confidence            34699999999999999999999999999999999999998653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.76  E-value=0.00045  Score=62.73  Aligned_cols=44  Identities=23%  Similarity=0.238  Sum_probs=40.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..+|+.||.+...+++.|++++..+||.|++++||+++|++.+.
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH
Confidence            45799999999999999999999899999999999999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.74  E-value=0.026  Score=52.87  Aligned_cols=114  Identities=10%  Similarity=0.049  Sum_probs=73.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQD-GQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      -.++.+.|+|+ |++|.++|..|+..|.  .+++.+++.++++....++....+- .++... .  .+.++         
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~---------   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD---------   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH---------
Confidence            34678999998 9999999999999987  7999999999888888888765321 122222 1  22221         


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVG  188 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vs  188 (384)
                        +..-|++|..||.... +  ..+.   ...++.|..-...+.+.+..+-.  .+++++
T Consensus        71 --~~~adivIitag~~~k-~--g~~R---~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         71 --CKDADLVVITAGAPQK-P--GETR---LDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             --hCCCCEEEEecCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence              2378999999998422 2  1122   23566676555555555544432  344444

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.72  E-value=0.007  Score=54.75  Aligned_cols=46  Identities=17%  Similarity=0.287  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+.+.+++++...||+||.++||.+.|++.+..
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~  200 (255)
T PRK06113        155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc
Confidence            4457999999999999999999998999999999999999987753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.72  E-value=0.00093  Score=60.28  Aligned_cols=44  Identities=18%  Similarity=0.119  Sum_probs=39.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      +...|+.||.+...+++.+++++...||+||+|+||+++|+..+
T Consensus       155 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        155 PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence            34579999999999999999999999999999999999998654

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0047  Score=57.39  Aligned_cols=46  Identities=37%  Similarity=0.473  Sum_probs=41.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.++.++..+||.|++++||+++|++.++.
T Consensus       152 ~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        152 GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence            3457999999999999999999999999999999999999998753

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.71  E-value=0.0071  Score=57.32  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=50.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      |++++|+||+||+|.++++.....|+ +|+.++++.++.+...+++     +...   ..|..+. +..+.+.++..  +
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~---vi~~~~~-~~~~~i~~~~~--~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA---AINYKTD-NVAERLRELCP--E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE---EEECCCC-CHHHHHHHHCC--C
Confidence            48999999999999999888888899 7999888865544333322     2211   1233332 23232333221  4


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++++|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            69999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.71  E-value=0.0075  Score=54.78  Aligned_cols=45  Identities=27%  Similarity=0.234  Sum_probs=40.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.+++.+...||+|++|+||.++|++.++
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        154 LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc
Confidence            445799999999999999999999899999999999999998653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.71  E-value=0.0056  Score=55.49  Aligned_cols=45  Identities=22%  Similarity=0.166  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+++||+++|++.+.
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence            445799999999999999999999999999999999999998764

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.70  E-value=0.0096  Score=55.89  Aligned_cols=75  Identities=23%  Similarity=0.326  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++|+||++++|.++++.+...|++|+.++++.++.+..    .+.  +.. ..  .|.   ++   +.+.+. +..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~--~~~-~~--~~~---~~---~~~~~~-~~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KEL--GAD-YV--IDG---SK---FSEDVK-KLG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHc--CCc-EE--Eec---HH---HHHHHH-hcc
Confidence            467999999999999999999999999999988876543332    211  111 11  122   11   222222 234


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            79999999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.70  E-value=0.016  Score=53.54  Aligned_cols=84  Identities=14%  Similarity=0.205  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMI---RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ++++|+++|-|| ||-+++++..|+..|+ +|.++.|+.+   +.++..+++.... ...+.     +.+.++...    
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~-~~~~~-----~~~~~~~~~----  189 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVT-----VTDLADQQA----  189 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhcc-CceEE-----Eechhhhhh----
Confidence            467899999997 7779999999999997 6999999854   5555544443221 11111     111121111    


Q ss_pred             HHHhCCCccEEEECCCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSV  147 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~  147 (384)
                      +.+...+.|++||+..+.+
T Consensus       190 l~~~~~~aDivINaTp~Gm  208 (288)
T PRK12749        190 FAEALASADILTNGTKVGM  208 (288)
T ss_pred             hhhhcccCCEEEECCCCCC
Confidence            1112346899999876644

>PRK05855 short chain dehydrogenase; Validated

Probab=96.70  E-value=0.005  Score=62.73  Aligned_cols=46  Identities=33%  Similarity=0.535  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.|++++.+.||+|++|+||+++|++.+..
T Consensus       461 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        461 SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence            3457999999999999999999999999999999999999998864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.70  E-value=0.0074  Score=54.55  Aligned_cols=45  Identities=18%  Similarity=0.283  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.++++++++||++|+|+||+++|++.+.
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhh
Confidence            345799999999999999999999999999999999999998764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.70  E-value=0.013  Score=56.51  Aligned_cols=83  Identities=19%  Similarity=0.250  Sum_probs=56.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHHHhcCCcEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS-------------------MIRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..|.+...+.+.+..+..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467788888875 8999999999999998 69999887                   34555566666665554555555


Q ss_pred             EeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       113 ~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ...+++ +.+.+++       ...|++|++..
T Consensus       211 ~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHH-------hCCCEEEECCC
Confidence            544443 2333222       25688887764

>PRK08643 acetoin reductase; Validated

Probab=96.69  E-value=0.008  Score=54.34  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=40.4

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++.++||+|++++||+++|++++.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence            45699999999999999999998899999999999999998764

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.68  E-value=0.014  Score=54.86  Aligned_cols=104  Identities=13%  Similarity=-0.005  Sum_probs=67.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH--HH--H
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-------TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIK--NF--A  126 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~--~~--~  126 (384)
                      ++.|+||+|.+|..++..|+..|.       .+++.+++++.              ........|+.|.....  ..  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            378999999999999999998654       59999986432              11233455555544110  00  0


Q ss_pred             HHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         127 KNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       127 ~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                      ....+.+...|++|+.||....      +-+...+.+..|+.-.-.+.+.+.++-
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~------~~~tr~~ll~~N~~i~k~i~~~i~~~~  115 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRK------EGMERRDLLSKNVKIFKEQGRALDKLA  115 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCC------CCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            0112344579999999998422      123356688888887777888877773

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.67  E-value=0.0081  Score=55.51  Aligned_cols=40  Identities=25%  Similarity=0.383  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG   93 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~   93 (384)
                      ++.||+++|.|. |++|+++|+.|...|++|++.+|+.++.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            678999999998 7799999999999999999999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.0052  Score=56.84  Aligned_cols=43  Identities=16%  Similarity=0.138  Sum_probs=39.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.|+.++.++||+||+|+|| +.|++..
T Consensus       166 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        166 GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch
Confidence            345799999999999999999999999999999999 8998764

>cd00704 MDH Malate dehydrogenase

Probab=96.65  E-value=0.021  Score=53.73  Aligned_cols=102  Identities=15%  Similarity=-0.013  Sum_probs=64.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH--H--H
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-------TVVLGCRSM--IRGQEALEKLKKEVQDGQIVLMELNLASFDSI--K--N  124 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v--~--~  124 (384)
                      .+.||||+|.+|..++..|+..|.       .+++.++++  ++.+                ....|+.|....  .  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~----------------g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE----------------GVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc----------------eeeeehhhhcccccCCcE
Confidence            578999999999999999998653       599999875  3322                233444443100  0  0


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                      ......+.+...|++|+.||.... +     -+.-...+..|..-.-.+.+.+.++-
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~-~-----g~tR~dll~~N~~i~~~i~~~i~~~~  116 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRK-P-----GMERADLLRKNAKIFKEQGEALNKVA  116 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCC-c-----CCcHHHHHHHhHHHHHHHHHHHHHhC
Confidence            001122344579999999998422 2     12233467778777767777776663

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.63  E-value=0.026  Score=45.84  Aligned_cols=80  Identities=24%  Similarity=0.346  Sum_probs=57.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS-------------------MIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .++++|.|+ ||+|.++++.|+..|. ++.+++.+                   ..|.+...+.+.+..+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888885 8999999999999998 58887653                   23455666667777677788888888


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ++ .+...++++       ..|++|.+..
T Consensus        81 ~~-~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 ID-EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             CS-HHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-ccccccccc-------CCCEEEEecC
Confidence            83 344444442       5788888754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK09242 tropinone reductase; Provisional

Probab=96.62  E-value=0.01  Score=53.73  Aligned_cols=45  Identities=24%  Similarity=0.311  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.++.++.++||.+++++||+++|++.+.
T Consensus       156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~  200 (257)
T PRK09242        156 SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG  200 (257)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc
Confidence            445799999999999999999998899999999999999998764

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.62  E-value=0.023  Score=51.30  Aligned_cols=84  Identities=14%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVL  111 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  111 (384)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .|.+.+.+.+.+..+..++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3578889999998 9999999999999997 577776542                   234444555555555556666


Q ss_pred             EEeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       112 ~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      +...++. +...+++       ...|++|.+..
T Consensus       107 ~~~~i~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        107 INARLDD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EeccCCH-HHHHHHH-------hcCCEEEecCC
Confidence            6555542 2222222       35788877753

>PRK07985 oxidoreductase; Provisional

Probab=96.61  E-value=0.008  Score=55.83  Aligned_cols=43  Identities=28%  Similarity=0.349  Sum_probs=39.8

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ..+|+.||.+...+++.+++++.++||+||+|+||++.|++..
T Consensus       196 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~  238 (294)
T PRK07985        196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI  238 (294)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccc
Confidence            4579999999999999999999999999999999999999854

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.0099  Score=54.62  Aligned_cols=45  Identities=22%  Similarity=0.242  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|+.++.+.||.|++|+||+++|++.++
T Consensus       144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            345799999999999999999999999999999999999998765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.59  E-value=0.00081  Score=60.68  Aligned_cols=45  Identities=29%  Similarity=0.358  Sum_probs=41.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+|+.||.+...+++.++.++.++||.+++|+||++.|++.+..
T Consensus       153 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~  197 (251)
T COG1028         153 QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAAL  197 (251)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhh
Confidence            368999999999999999999999999999999999999998854

>PRK06398 aldose dehydrogenase; Validated

Probab=96.59  E-value=0.012  Score=53.48  Aligned_cols=44  Identities=27%  Similarity=0.412  Sum_probs=39.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+. |+||+++||+++|++.+.
T Consensus       140 ~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        140 NAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence            45579999999999999999999765 999999999999998754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.55  E-value=0.012  Score=53.52  Aligned_cols=45  Identities=16%  Similarity=0.183  Sum_probs=40.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.+|.+...+++.+++++++.||.|++|.||.++|++...
T Consensus       155 ~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        155 TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence            456799999999999999999999999999999999999997643

>KOG1198|consensus

Probab=96.54  E-value=0.011  Score=55.99  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=51.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh-
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ-  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-  132 (384)
                      -+|+.+||.||+||+|.+.++-....|+..++++++.++. +..    ++.+..    ...|..+++-    .+++++. 
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~----k~lGAd----~vvdy~~~~~----~e~~kk~~  222 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELV----KKLGAD----EVVDYKDENV----VELIKKYT  222 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHH----HHcCCc----EeecCCCHHH----HHHHHhhc
Confidence            4688999999999999999988888895544455544332 222    222212    3457777443    3333332 


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+++|+++-|.|-
T Consensus       223 ~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  223 GKGVDVVLDCVGG  235 (347)
T ss_pred             CCCccEEEECCCC
Confidence            5689999999986

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.008  Score=54.25  Aligned_cols=46  Identities=33%  Similarity=0.482  Sum_probs=41.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||.++|++++..
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence            4457999999999999999999998999999999999999997753

>PLN02253 xanthoxin dehydrogenase

Probab=96.48  E-value=0.012  Score=54.16  Aligned_cols=43  Identities=23%  Similarity=0.153  Sum_probs=39.7

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ..+|+.||.+...+++.+++++...||+|++++||.+.|++.+
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence            3479999999999999999999999999999999999999764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.48  E-value=0.016  Score=54.28  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=51.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      -.|++++|+|++ |+|...++.....|++|+..+|++++.+.+.+ +     +...   ..|-+|++..+.+.+      
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~---~i~~~~~~~~~~~~~------  228 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADH---VINSSDSDALEAVKE------  228 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcE---EEEcCCchhhHHhHh------
Confidence            358999999998 99977777666799999999999877655432 2     2222   233334444443332      


Q ss_pred             CCccEEEECCC
Q psy2854         134 PKIHVLINNAG  144 (384)
Q Consensus       134 g~id~lvnnAG  144 (384)
                       ..|++|+.++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             2899999987

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.47  E-value=0.033  Score=55.39  Aligned_cols=84  Identities=15%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH-------------H
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF-------------D  120 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~-------------~  120 (384)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++.+...+ +     +.+  ++..|..+.             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcchh
Confidence            45889999996 899999999999999999999999776554322 2     333  222333221             1


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCC
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVS  146 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~  146 (384)
                      ..++..+.+.+..+..|++|+++|+.
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCC
Confidence            11222222233335799999999984

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.47  E-value=0.038  Score=51.92  Aligned_cols=154  Identities=13%  Similarity=-0.008  Sum_probs=90.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHHHh-cC-CcEEEEEeecCCHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-------TVVLGCRSMI--RGQEALEKLKKEV-QD-GQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~Dvs~~~~v~~~  125 (384)
                      +.+.|+|++|.+|..+|..|+..|.       .+++.+.+++  +++....++.... +- .++.+   .-.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcHH-----
Confidence            4789999999999999999998876       7999998543  3555555554321 00 11111   111222     


Q ss_pred             HHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--Cc-EEEEcCcccccCCcCcCCC
Q psy2854         126 AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QK-VVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~-iv~vsS~~~~~~~~~~~~~  202 (384)
                            .+..-|++|..||... .+  ..+.   .+.++.|..-.-.+.+.+.++-  .. ++++|-..-.....-    
T Consensus        75 ------~~~daDivvitaG~~~-k~--g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----  138 (322)
T cd01338          75 ------AFKDADWALLVGAKPR-GP--GMER---ADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----  138 (322)
T ss_pred             ------HhCCCCEEEEeCCCCC-CC--CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----
Confidence                  2347899999999842 22  1132   3357778776666666666665  23 344432211100000    


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA  237 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~  237 (384)
                      ....+   ..+....|+.++.--..|...+++.+.
T Consensus       139 ~k~sg---~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         139 MKNAP---DIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHcC---CCChHheEEehHHHHHHHHHHHHHHhC
Confidence            00011   012556899999998999999998874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.46  E-value=0.027  Score=49.61  Aligned_cols=82  Identities=17%  Similarity=0.148  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCc------------------hhHHHHHHHHHHHhcCCcEEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSM------------------IRGQEALEKLKKEVQDGQIVLME  113 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  113 (384)
                      .+++++|+|.|+ ||+|..+++.|++.|.. +.+++.+.                  .|.+...+.+.+..+..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            467789999995 89999999999999985 88888762                  23444444454444455555555


Q ss_pred             eecCCHHHHHHHHHHHHHhCCCccEEEECC
Q psy2854         114 LNLASFDSIKNFAKNVMKQYPKIHVLINNA  143 (384)
Q Consensus       114 ~Dvs~~~~v~~~~~~i~~~~g~id~lvnnA  143 (384)
                      .++++ +...+++       .+.|++|.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            55543 2222222       3567777663

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.46  E-value=0.026  Score=53.83  Aligned_cols=84  Identities=13%  Similarity=0.113  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVL  111 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  111 (384)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .|.+.+.+.+++..+..++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3577889999997 8999999999999998 588887653                   355666667776666666776


Q ss_pred             EEeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       112 ~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      +..+++.. +..+++       ...|++|.+..
T Consensus       103 ~~~~i~~~-~~~~~~-------~~~DvVvd~~d  127 (355)
T PRK05597        103 SVRRLTWS-NALDEL-------RDADVILDGSD  127 (355)
T ss_pred             EEeecCHH-HHHHHH-------hCCCEEEECCC
Confidence            66666542 222222       25788887764

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.01  Score=53.56  Aligned_cols=45  Identities=27%  Similarity=0.335  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+++.|+||++.|++.+.
T Consensus       157 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        157 RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK  201 (255)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence            445799999999999999999999999999999999999998764

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.013  Score=52.27  Aligned_cols=41  Identities=15%  Similarity=-0.020  Sum_probs=38.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNL  347 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l  347 (384)
                      ...|+.||.+...+++.|+.++.+.||+||+|+||+++|+.
T Consensus       151 ~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        151 LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            45699999999999999999999999999999999999993

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.44  E-value=0.0095  Score=53.93  Aligned_cols=74  Identities=12%  Similarity=0.148  Sum_probs=53.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++|+|||+- |+.++++|.++|++|+...++....+...    +    .....+..|.-|.+++.+++++     .++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~----~g~~~v~~g~l~~~~l~~~l~~-----~~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I----HQALTVHTGALDPQELREFLKR-----HSID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c----cCCceEEECCCCHHHHHHHHHh-----cCCC
Confidence            6899999998 99999999999999999988864332211    1    1122355666777776666643     2799


Q ss_pred             EEEECCCC
Q psy2854         138 VLINNAGV  145 (384)
Q Consensus       138 ~lvnnAG~  145 (384)
                      ++|+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998864

This enzyme was found to be a monomer by gel filtration.

>PRK12742 oxidoreductase; Provisional

Probab=96.44  E-value=0.0015  Score=58.25  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.+|.+...+++.+++++.++||+||.|+||+++|++.+.
T Consensus       143 ~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        143 MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA  186 (237)
T ss_pred             CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc
Confidence            44699999999999999999999999999999999999998764

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.018  Score=52.70  Aligned_cols=46  Identities=30%  Similarity=0.417  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+.+.++.++.+.||.++.|+||++.|++.+..
T Consensus       146 ~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        146 GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence            3457999999999999999999999999999999999999987654

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.013  Score=55.37  Aligned_cols=44  Identities=36%  Similarity=0.460  Sum_probs=39.7

Q ss_pred             CccccccccccccchHHHHHHhhcC-CceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADK-GVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~-~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|+.++.+. +|.|++|+||+++|+++++
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence            3579999999999999999999874 8999999999999998764

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.42  E-value=0.0067  Score=59.51  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          52 KPMEGKVCIITGAN----------------SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        52 ~~~~~k~vlITGas----------------~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .+++||.||||+|.                |-.|.++|++++.+|++|+++.-...        +.   ....+..+  +
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~---~p~~v~~i--~  318 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA---DPQGVKVI--H  318 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC---CCCCceEE--E
Confidence            35899999999974                57899999999999999998764321        00   12234433  3


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCC
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~  150 (384)
                      +.+.++..   +.+.+.+. .|++|++|.+....+
T Consensus       319 V~ta~eM~---~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        319 VESARQML---AAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             ecCHHHHH---HHHHhhCC-CCEEEEeccccceee
Confidence            44444444   44444444 699999999865443

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.014  Score=53.08  Aligned_cols=45  Identities=18%  Similarity=0.201  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.++.++..+||+|++|+||++.|++.+.
T Consensus       166 ~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        166 GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence            445799999999999999999999999999999999999998764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.41  E-value=0.028  Score=50.09  Aligned_cols=83  Identities=16%  Similarity=0.224  Sum_probs=57.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHHHhcCCcEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS-------------------MIRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      .+++++|+|.| .||+|.++|+.|+..|. ++.++|.+                   ..|.+...+.+++..+..++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            57788999999 58999999999999998 57776543                   23445556666666555667766


Q ss_pred             EeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       113 ~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ..+++ .+.+.+++       ...|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            66664 23333332       35788888765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.40  E-value=0.032  Score=48.63  Aligned_cols=37  Identities=24%  Similarity=0.329  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS   89 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~   89 (384)
                      ..++.++|+|.|+ ||+|..+|+.|++.|. ++++++++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3577889999997 7999999999999999 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.38  E-value=0.005  Score=43.74  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=22.9

Q ss_pred             CC-CEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecC
Q psy2854          55 EG-KVCIITGANSGIGYETAKELA-KLKATVVLGCRS   89 (384)
Q Consensus        55 ~~-k~vlITGas~GIG~a~a~~l~-~~G~~Vi~~~r~   89 (384)
                      +| |+|||+|+|+|.|++-.-.++ ..|++.+-+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            44 899999999999999444444 678887766553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.36  E-value=0.042  Score=64.57  Aligned_cols=181  Identities=13%  Similarity=0.013  Sum_probs=103.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.++.++|++.+++++.+++.+|.++|++|.++... +........+     +..+-.+.+.-.|.+++..+++.+.+..
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSP-WVVSHSASPL-----ASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecc-cccccccccc-----ccccccccccccchHHHHHHHHhhhccc
Confidence            457888888889999999999999999998876321 1100000000     1122233444456677888888888878


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +.++.+||-.+...... ...+.......-...+...|.+.|.+.+.+.     .++.++...+..|..+-+.+.   +.
T Consensus      1827 ~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~---~~ 1902 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADS---GT 1902 (2582)
T ss_pred             cccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccc---cc
Confidence            89999999877532100 0000001111111234445677777655432     466677665544432111000   00


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPG  249 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG  249 (384)
                      .    .. --....+++.+|+|++++|+....+|...+.|.
T Consensus      1903 ~----~~-~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1903 Q----QV-KAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             c----cc-ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            0    00 002246899999999999997666666666553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.022  Score=52.00  Aligned_cols=46  Identities=28%  Similarity=0.411  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++...||.++.++||+++|++.+..
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence            4457999999999999999999988999999999999999987643

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.34  E-value=0.016  Score=52.36  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++|+|+++ +|.++++.+...|.+|+++++++++.+..    ++.  +.. .  ..|..+.+..+.+.   ....+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~--g~~-~--~~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KEL--GAD-H--VIDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHh--CCc-e--eccCCcCCHHHHHH---HhcCC
Confidence            478999999998 99999999999999999999886543332    221  111 1  22433333333332   22335


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|++++++|.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999875

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.34  E-value=0.015  Score=54.15  Aligned_cols=79  Identities=19%  Similarity=0.271  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+|+++++|.++++.+...|++|+++.++.++.+.. .    .. +..   ...+..+.+..+.+.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~----~~-g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-E----AL-GAD---IAINYREEDFVEVVKAET-G-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H----Hc-CCc---EEEecCchhHHHHHHHHc-C-CC
Confidence            468999999999999999999999999999998886554322 2    21 111   122333333333222211 1 13


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.33  E-value=0.045  Score=44.85  Aligned_cols=77  Identities=14%  Similarity=0.178  Sum_probs=49.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEEEEeecCC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVLMELNLAS  118 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~  118 (384)
                      ++|.|+ ||+|.++++.|++.|. ++.+++.+.                   .|.+...+.+++..+..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            678886 8999999999999998 588887541                   2334444555555445556556555544


Q ss_pred             HHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         119 FDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       119 ~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ...        .+.+.+.|++|.+..
T Consensus        81 ~~~--------~~~~~~~diVi~~~d   98 (143)
T cd01483          81 DNL--------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhH--------HHHhcCCCEEEECCC
Confidence            321        122346777777654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.018  Score=52.19  Aligned_cols=44  Identities=34%  Similarity=0.428  Sum_probs=40.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++.+.||+++.++||+++|++.+
T Consensus       148 ~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        148 STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV  191 (260)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH
Confidence            34579999999999999999999999999999999999999865

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.016  Score=52.56  Aligned_cols=44  Identities=27%  Similarity=0.492  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.+|.+...+++.+++.+.+.||+|++++||.+.|++.+.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES  195 (263)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHh
Confidence            45699999999999999999998889999999999999998764

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.29  E-value=0.038  Score=47.03  Aligned_cols=31  Identities=29%  Similarity=0.251  Sum_probs=27.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCE-EEEEecCc
Q psy2854          59 CIITGANSGIGYETAKELAKLKAT-VVLGCRSM   90 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~   90 (384)
                      |+|.|+ ||+|.++++.|++.|.. +.+++.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677785 89999999999999995 99998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.29  E-value=0.015  Score=52.08  Aligned_cols=47  Identities=26%  Similarity=0.268  Sum_probs=42.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+.+.+++++.+.|+.++.++||+++|++.+..+
T Consensus       151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence            44579999999999999999999889999999999999999988654

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.02  Score=51.23  Aligned_cols=44  Identities=27%  Similarity=0.244  Sum_probs=39.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.+|.+...+++.+++++...+++++.++||++.|++..
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~  192 (245)
T PRK12937        149 GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF  192 (245)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence            44579999999999999999999889999999999999999864

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.26  E-value=0.045  Score=51.19  Aligned_cols=116  Identities=18%  Similarity=0.125  Sum_probs=68.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE--EEEEecCc--hhHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHHHHHh
Q psy2854          58 VCIITGANSGIGYETAKELAKLKAT--VVLGCRSM--IRGQEALEKLKKEVQDGQIVLMELNLA-SFDSIKNFAKNVMKQ  132 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~--Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~i~~~  132 (384)
                      .+.|+|++|.+|..++..|+..|..  |++++|+.  ++++....++.......... .....+ |.+.           
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d~~~-----------   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSDLSD-----------   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCCHHH-----------
Confidence            5889999999999999999999864  99999954  55554444443321111000 012222 2221           


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSL  191 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~  191 (384)
                      ...-|++|.++|... .+  ..+.   ...++.|..-.....+.+.+...  .++++++..
T Consensus        70 l~~aDiViitag~p~-~~--~~~r---~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          70 VAGSDIVIITAGVPR-KE--GMSR---LDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             hCCCCEEEEecCCCC-CC--CCCH---HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            237899999999732 21  1122   23455666655555555555433  466666543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02415 23BDH acetoin reductases

Probab=96.25  E-value=0.019  Score=51.78  Aligned_cols=46  Identities=24%  Similarity=0.339  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+.+.+++++...+|.+++++||.++|+++++.
T Consensus       146 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~  191 (254)
T TIGR02415       146 ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI  191 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh
Confidence            3457999999999999999999988899999999999999997653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.22  E-value=0.017  Score=51.83  Aligned_cols=43  Identities=26%  Similarity=0.217  Sum_probs=39.7

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ..|+.||.+...+++++++++...||.|+.++||+++|++.+.
T Consensus       155 ~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  197 (248)
T PRK06947        155 VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS  197 (248)
T ss_pred             cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc
Confidence            4699999999999999999998899999999999999998653

>PRK08223 hypothetical protein; Validated

Probab=96.22  E-value=0.033  Score=51.04  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=31.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS   89 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~   89 (384)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            477889999986 7999999999999998 58887765

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.21  E-value=0.026  Score=55.23  Aligned_cols=73  Identities=23%  Similarity=0.429  Sum_probs=51.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.++..+++    + .       ++.+.++..+.+     
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~----g-~-------~~~~~~~~~~~l-----  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF----G-G-------EAIPLDELPEAL-----  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----C-C-------cEeeHHHHHHHh-----
Confidence            467899999987 9999999999999997 7999999977665544432    1 1       111223332222     


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                        ...|++|++.|.
T Consensus       241 --~~aDvVI~aT~s  252 (423)
T PRK00045        241 --AEADIVISSTGA  252 (423)
T ss_pred             --ccCCEEEECCCC
Confidence              357999999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.20  E-value=0.018  Score=52.18  Aligned_cols=45  Identities=20%  Similarity=0.378  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+.+.+++++..+||++++++||+++|++++.
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence            456799999999999999999999899999999999999998654

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.019  Score=51.92  Aligned_cols=44  Identities=25%  Similarity=0.317  Sum_probs=40.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...+|+.||.+...+++++++++.+++|+++.|+||.+.|++.+
T Consensus       149 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~  192 (258)
T PRK08628        149 GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE  192 (258)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH
Confidence            45679999999999999999999889999999999999999865

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.19  E-value=0.045  Score=52.48  Aligned_cols=84  Identities=17%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVL  111 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  111 (384)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .|.+.+.+.+.+..+..++..
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3577889999986 7999999999999997 688888762                   244444555555555555666


Q ss_pred             EEeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       112 ~~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      +...++ .+...+++       ...|++|.+..
T Consensus       116 ~~~~i~-~~~~~~~~-------~~~DlVid~~D  140 (370)
T PRK05600        116 LRERLT-AENAVELL-------NGVDLVLDGSD  140 (370)
T ss_pred             eeeecC-HHHHHHHH-------hCCCEEEECCC
Confidence            665554 22333322       24677776653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.19  E-value=0.0027  Score=57.75  Aligned_cols=42  Identities=31%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.+++++.+. |+||+|+||++.|++..
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcC
Confidence            3479999999999999999999774 99999999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.18  E-value=0.03  Score=50.19  Aligned_cols=47  Identities=26%  Similarity=0.406  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++...++.++.++||.++|++.+..+
T Consensus       152 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~  198 (247)
T PRK12935        152 GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP  198 (247)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc
Confidence            44579999999999999999999888999999999999999876543

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.021  Score=52.47  Aligned_cols=45  Identities=27%  Similarity=0.283  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|+.+++..||.|++++||.++|++.++
T Consensus       152 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence            345699999999999999999999899999999999999998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.0091  Score=54.15  Aligned_cols=43  Identities=26%  Similarity=0.101  Sum_probs=38.8

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.+++++..+||+||+++||+++|++.+
T Consensus       150 ~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  192 (259)
T PRK06125        150 YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML  192 (259)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH
Confidence            3468999999999999999999999999999999999999754

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.15  E-value=0.011  Score=58.62  Aligned_cols=45  Identities=22%  Similarity=0.319  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALE   98 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   98 (384)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            467899999996 799999999999999999999998766555443

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.0023  Score=57.92  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++..+||+||.++||+++|++.+.
T Consensus       157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~  200 (254)
T PRK06114        157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR  200 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc
Confidence            35799999999999999999999999999999999999998764

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.13  E-value=0.047  Score=49.08  Aligned_cols=37  Identities=19%  Similarity=0.294  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS   89 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~   89 (384)
                      ..+++++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3577889999986 7999999999999997 58887765

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.13  E-value=0.0027  Score=57.76  Aligned_cols=42  Identities=29%  Similarity=0.247  Sum_probs=38.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.+++++... |+||+|+||++.|++.+
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence            4579999999999999999999876 99999999999999865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.12  E-value=0.021  Score=53.66  Aligned_cols=79  Identities=15%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+++|+||+|++|.++++.....|++|+.++++.++.+..    ++ . +.. .  ..|..+.+..++ +.+..  .+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~-~-Ga~-~--vi~~~~~~~~~~-v~~~~--~~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KE-L-GFD-A--VFNYKTVSLEEA-LKEAA--PD  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC-E--EEeCCCccHHHH-HHHHC--CC
Confidence            478999999999999999888888999999988876543332    22 1 221 1  234333322222 22221  14


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|+++++.|.
T Consensus       211 gvd~vld~~g~  221 (329)
T cd08294         211 GIDCYFDNVGG  221 (329)
T ss_pred             CcEEEEECCCH
Confidence            69999988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14968 putative methyltransferase; Provisional

Probab=96.12  E-value=0.097  Score=44.78  Aligned_cols=79  Identities=20%  Similarity=0.049  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCc-EEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ-IVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++++++-.|++.|.   ++..++++|.+|+.++++++..+...+.+.......+ +.++.+|+.+..         .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc--
Confidence            46789999988776   6666677799999999997776666555543321112 778888875421         11  


Q ss_pred             CCccEEEECCCCCC
Q psy2854         134 PKIHVLINNAGVSV  147 (384)
Q Consensus       134 g~id~lvnnAG~~~  147 (384)
                      +.+|+++.|..+..
T Consensus        89 ~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 DKFDVILFNPPYLP  102 (188)
T ss_pred             cCceEEEECCCcCC
Confidence            26899999987643

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.032  Score=49.83  Aligned_cols=45  Identities=13%  Similarity=0.011  Sum_probs=39.4

Q ss_pred             CCccccccccccccchHHHHHHhhcC-CceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADK-GVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~-~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++... +|+|+.|+||+++|++.+.
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK  201 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc
Confidence            34579999999999999999998776 6999999999999998653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.10  E-value=0.022  Score=54.07  Aligned_cols=76  Identities=17%  Similarity=0.148  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +...   ..|..+. ++.+    +.+..
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~-~~~~----~~~~~  233 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADK---LVNPQND-DLDH----YKAEK  233 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcE---EecCCcc-cHHH----HhccC
Confidence            5789999986 8999999988888898 588888886655432 222     2211   2343332 2222    22223


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +.+|+++.++|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            569999999984

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.10  E-value=0.016  Score=48.96  Aligned_cols=39  Identities=23%  Similarity=0.266  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .++.||.++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999966679999999999999999988873

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.09  E-value=0.029  Score=52.68  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+.+++|.|+++++|.++++.+.+.|++|+.++++.++.+...    +.. +..   ...|..+.+..+.+. +..  .+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~----~~~-g~~---~~~~~~~~~~~~~v~-~~~--~~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV----EEL-GFD---AAINYKTPDLAEALK-EAA--PD  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hhc-CCc---eEEecCChhHHHHHH-Hhc--cC
Confidence            4689999999999999999999999999999988765433322    211 111   112333333222222 222  14


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|++++++|.
T Consensus       214 ~~d~vi~~~g~  224 (329)
T cd05288         214 GIDVYFDNVGG  224 (329)
T ss_pred             CceEEEEcchH
Confidence            79999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.0033  Score=56.97  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=39.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.+++++.++||+|+.++||++.|+++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence            3469999999999999999999989999999999999999864

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.028  Score=51.44  Aligned_cols=45  Identities=33%  Similarity=0.367  Sum_probs=41.0

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.++.++.+.||.|+.++||.++|++.++.
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~  184 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNA  184 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccccc
Confidence            456999999999999999999988999999999999999998753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.07  E-value=0.0031  Score=56.78  Aligned_cols=44  Identities=30%  Similarity=0.353  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++..+||+|++++||++.|++.+.
T Consensus       150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA  193 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence            45699999999999999999999899999999999999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.06  E-value=0.068  Score=42.73  Aligned_cols=80  Identities=19%  Similarity=0.245  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHH-CCCEEE-EEecCch-hH-----------------HHHHHHHHHHhcCCcEEEEEeecC
Q psy2854          58 VCIITGANSGIGYETAKELAK-LKATVV-LGCRSMI-RG-----------------QEALEKLKKEVQDGQIVLMELNLA  117 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~-~G~~Vi-~~~r~~~-~~-----------------~~~~~~l~~~~~~~~~~~~~~Dvs  117 (384)
                      .+.|.|++|-+|+++++.+.+ .|.+++ .++|+.+ ..                 ....+++.+.      .-+..|.|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------~DVvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------ADVVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------SEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------CCEEEEcC
Confidence            588999999999999999998 688855 4556541 00                 0112222211      11678999


Q ss_pred             CHHHHHHHHHHHHHhCCCccEEEECCCC
Q psy2854         118 SFDSIKNFAKNVMKQYPKIHVLINNAGV  145 (384)
Q Consensus       118 ~~~~v~~~~~~i~~~~g~id~lvnnAG~  145 (384)
                      .++.+.+.++...+.  ++.+++-..|.
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999988887  78899999887

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.06  E-value=0.033  Score=54.44  Aligned_cols=73  Identities=21%  Similarity=0.504  Sum_probs=51.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++..+++     +..  .+  +   .++..+.+     
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~--~i--~---~~~l~~~l-----  238 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGE--AV--K---FEDLEEYL-----  238 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCe--Ee--e---HHHHHHHH-----
Confidence            477899999997 999999999999999 68999999976655444432     111  11  2   22333333     


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                        ...|++|.+.|.
T Consensus       239 --~~aDvVi~aT~s  250 (417)
T TIGR01035       239 --AEADIVISSTGA  250 (417)
T ss_pred             --hhCCEEEECCCC
Confidence              257999999775

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08328 hypothetical protein; Provisional

Probab=96.04  E-value=0.063  Score=47.99  Aligned_cols=38  Identities=18%  Similarity=0.237  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~   90 (384)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3567888999986 7999999999999997 588887653

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.03  E-value=0.024  Score=52.21  Aligned_cols=37  Identities=24%  Similarity=0.327  Sum_probs=33.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      +++||.|+|.|+++=.|+.++..|.++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            6889999999998779999999999999999887663

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.02  E-value=0.032  Score=51.85  Aligned_cols=39  Identities=26%  Similarity=0.426  Sum_probs=35.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR   92 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~   92 (384)
                      ++.+++++|.|. |++|+.+++.|.+.|++|.+++|+.++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            467899999997 679999999999999999999998654

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.0036  Score=56.75  Aligned_cols=44  Identities=32%  Similarity=0.210  Sum_probs=40.4

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.++.++.+++|.|+.++||+++|++.+..
T Consensus       157 ~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        157 FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence            46999999999999999999999999999999999999987754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.00  E-value=0.031  Score=50.12  Aligned_cols=46  Identities=28%  Similarity=0.351  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.+|.+...+++.+++++...||.++.++||+++|++.+..
T Consensus       149 ~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~  194 (246)
T PRK12938        149 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  194 (246)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc
Confidence            3456999999999999999999998999999999999999987653

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.00  E-value=0.026  Score=52.54  Aligned_cols=40  Identities=25%  Similarity=0.324  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ   94 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~   94 (384)
                      ++++++|+|+++++|.++++.+...|++|+.++++.++.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            4679999999999999999999999999999988865444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK07069 short chain dehydrogenase; Validated

Probab=95.99  E-value=0.028  Score=50.46  Aligned_cols=45  Identities=20%  Similarity=0.212  Sum_probs=39.4

Q ss_pred             CCccccccccccccchHHHHHHhhcC--CceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADK--GVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~--~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.+|.+...+++.+++.+.++  +|+++.++||+++|++.+.
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        147 DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence            44579999999999999999998765  4999999999999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.032  Score=51.69  Aligned_cols=44  Identities=27%  Similarity=0.280  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++.+.++||.+++|+||.+.|++.+.
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence            35799999999999999999999999999999999999998764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.92  E-value=0.04  Score=49.78  Aligned_cols=43  Identities=30%  Similarity=0.292  Sum_probs=39.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ...|+.||.+...+++.+++++...+|+|++++||.++|++..
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        164 ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            3579999999999999999999889999999999999998754

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.014  Score=50.58  Aligned_cols=42  Identities=17%  Similarity=0.098  Sum_probs=37.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLF  348 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~  348 (384)
                      ....|+.||.+...+++.++.++ ++||.++.|+||+++|++.
T Consensus       121 ~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        121 GGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence            34579999999999999999999 8899999999999999864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=95.91  E-value=0.0045  Score=55.22  Aligned_cols=44  Identities=25%  Similarity=0.160  Sum_probs=39.4

Q ss_pred             CccccccccccccchHHHHHHhhc--CCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYAD--KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~--~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|++++..  .++.|++++||+++|++.+.
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~  190 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP  190 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc
Confidence            346999999999999999999876  58999999999999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.90  E-value=0.0035  Score=57.53  Aligned_cols=45  Identities=29%  Similarity=0.431  Sum_probs=40.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       170 ~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~  214 (278)
T PRK08277        170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRA  214 (278)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhh
Confidence            345799999999999999999999999999999999999998654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.89  E-value=0.03  Score=49.89  Aligned_cols=42  Identities=24%  Similarity=0.126  Sum_probs=37.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLF  348 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~  348 (384)
                      ....|+.||.+...+++.+++++.. +|+||+|+||++.|+..
T Consensus       144 ~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~  185 (236)
T PRK06483        144 KHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEG  185 (236)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCC
Confidence            3457999999999999999999976 59999999999988653

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.0045  Score=56.00  Aligned_cols=44  Identities=27%  Similarity=0.549  Sum_probs=40.3

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.+|.+...+++.+++++...++.|+.++||+++|++.+.
T Consensus       163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH  206 (258)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence            45699999999999999999998889999999999999998764

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.87  E-value=0.036  Score=49.34  Aligned_cols=75  Identities=23%  Similarity=0.226  Sum_probs=57.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++|.|+ |-+|..+|+.|.+.|++|+++++++++.++...+      ....+.+.+|-+|++.++++-      ....|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~ag------i~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAG------IDDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcC------CCcCC
Confidence            5677775 7799999999999999999999997766653331      135778999999998776541      23678


Q ss_pred             EEEECCCC
Q psy2854         138 VLINNAGV  145 (384)
Q Consensus       138 ~lvnnAG~  145 (384)
                      ++|...|-
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            88877664

>PLN00203 glutamyl-tRNA reductase

Probab=95.85  E-value=0.037  Score=55.31  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.++.++|.|+ |++|+.+++.|...|+ +|+++.|+.++.++..+++    ++..+.+     ...++..+.+     
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~-----~~~~dl~~al-----  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIY-----KPLDEMLACA-----  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEe-----ecHhhHHHHH-----
Confidence            377899999998 9999999999999997 6999999977766655433    2211211     1222332222     


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                        ...|++|.+.+.
T Consensus       328 --~~aDVVIsAT~s  339 (519)
T PLN00203        328 --AEADVVFTSTSS  339 (519)
T ss_pred             --hcCCEEEEccCC
Confidence              367999998765

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.05  Score=48.99  Aligned_cols=45  Identities=22%  Similarity=0.272  Sum_probs=40.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+.+.+++.+.+.++.++.++||++.|++.+.
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence            345699999999999999999998889999999999999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	384
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		9e-27
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-13
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-12
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-12
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-11
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-11
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-11
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		5e-11
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		5e-11
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		6e-11
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		6e-11
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		8e-11
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		8e-11
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		9e-11
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		5e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-09
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-09
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-09
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-09
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-09
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-09
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		5e-09
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-09
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-08
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-08
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		2e-08
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-08
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		4e-08
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-07
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		1e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-07
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-07
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		1e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-07
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-07
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-07
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-07
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-07
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-07
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-07
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-07
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-07
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-07
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-07
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-07
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-07
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-07
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		7e-07
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		7e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		8e-07
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		9e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-06
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-06
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		1e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-06
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-06
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-06
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-06
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		3e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-06
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-06
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		5e-06
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		6e-06
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		7e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		1e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-05
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		2e-05
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-05
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-05
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-05
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-05
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		4e-05
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		4e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-05
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-05
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		5e-05
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		6e-05
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		7e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		8e-05
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		9e-05
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-04
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-04
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-04
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-04
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-04
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		2e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		3e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		3e-04
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-04
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-04
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		3e-04
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		5e-04
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-04
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		5e-04
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		6e-04
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		6e-04
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		6e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		7e-04
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		7e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		7e-04
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		7e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		7e-04
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		8e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  +ITGANSG+G  TA+ELA+  ATV++  R   +G+ A   +      GQ+ + EL+L
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-----GQVEVRELDL 71
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
               S++ FA  V        VLINNAG+ +VP      T +G+E   G NH+GHF LTN
Sbjct: 72  QDLSSVRRFADGV----SGADVLINNAGIMAVPYA---LTVDGFESQIGTNHLGHFALTN 124
Query: 176 LLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP--AYCNSKLMNYYFGAEL 232
           LL+ R+  +VV V S     G I+ ++LN    +  + +S P  AY  SKL N  F +EL
Sbjct: 125 LLLPRLTDRVVTVSSMAHWPGRINLEDLN----WRSRRYS-PWLAYSQSKLANLLFTSEL 179
Query: 233 YLKYADKGVDVSVVC--PGWCYTNL 255
             +    G  +  +   PG+ +TNL
Sbjct: 180 QRRLTAAGSPLRALAAHPGYSHTNL 204

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 82
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 133
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 134 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 189
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPGW  T +
Sbjct: 190 ALGLELARTGITVNAVCPGWVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 78
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG    +    T +   E+   +      + T
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAG---RLGGGATAELADELWLDV------VET 129
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 130 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 185
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 186 ALGLELARTGITVNAVCPGFVETPM 210

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 82
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG    +    T +   E+   +      + T
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAG---RLGGGATAELADELWLDV------VET 133
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 134 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 189
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 190 ALGLELARTGITVNAVCPGFVETPM 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 82
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 133
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 134 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLV---HAAP-YSASKHGVVGFTK 189
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 190 ALGLELARTGITVNAVCPGFVETPM 214

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 82
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 133
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 134 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 189
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 190 ALGLELARTGITVNAVCPGFVETPM 214

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 78
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 129
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 130 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 185
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 186 ALGLELARTGITVNAVCPGFVETPM 210

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 82
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 133
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 134 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 189
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 190 ALGLELARTGITVNAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL--MEL 114
           +V ++TGA SGIG E A+ L K    V + C    RG+E L    KE+++  +       
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFV-C---ARGEEGLRTTLKELREAGVEADGRTC 62
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++ S   I+     V+++Y  + VL+NNAG         T +   E+   +      + T
Sbjct: 63  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDV------VET 113
Query: 175 NLL-IERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           NL  + R+ K V+    +++RGT   ++  +  G++G V   H+ P Y  SK     F  
Sbjct: 114 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---HAAP-YSASKHGVVGFTK 169
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A  G+ V+ VCPG+  T +
Sbjct: 170 ALGLELARTGITVNAVCPGFVETPM 194

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQD 106
            P    +EGKV ++TGA  GIG E A EL +    V++    S    +E +  +KK   D
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 80
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
              V  + N+   + I    +  +K + K+ ++ +N+GV      K  T E ++  F IN
Sbjct: 81  AACV--KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN 138
Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             G F +     + ++    +G  L+  G+I      G+   V K   +  Y  SK    
Sbjct: 139 TRGQFFVAREAYKHLE----IGGRLILMGSI-----TGQAKAVPK---HAVYSGSKGAIE 186
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFY 264
            F   + +  ADK + V+VV PG   T+++ HA  + Y
Sbjct: 187 TFARCMAIDMADKKITVNVVAPGGIKTDMY-HAVCREY 223

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQD 106
            P    +EGKV ++TGA  GIG E A EL +    V++    S    +E +  +KK   D
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 80
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
              V  + N+   + I    +  +K + K+ ++ +N+GV      K  T E ++  F IN
Sbjct: 81  AACV--KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN 138
Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             G F +     + ++    +G  L+  G+I      G+   V K   +  Y  SK    
Sbjct: 139 TRGQFFVAREAYKHLE----IGGRLILMGSI-----TGQAKAVPK---HAVYSGSKGAIE 186
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFY 264
            F   + +  ADK + V+VV PG   T+++ HA  + Y
Sbjct: 187 TFARCMAIDMADKKITVNVVAPGGIKTDMY-HAVCREY 223

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 41  SWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL 100
           SW+K ++      ++G+V I+TG  +GIG    KEL +L + VV+  R + R + A ++L
Sbjct: 3   SWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL 62
Query: 101 KKEV---QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKE 157
           +  +   +  +++ ++ N+ + + + N  K+ +  + KI+ L+NN G       +  + +
Sbjct: 63  QANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSK 122
Query: 158 GYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDR--GTIDFDNLNGEKGFVQKGHSN 215
           G+      N  G F +             V SS M    G+I    +  + GF    HS 
Sbjct: 123 GWHAVLETNLTGTFYMCK----------AVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSG 172
Query: 216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
            A        Y     L L++A  G+ ++ V PG  Y+ 
Sbjct: 173 AARAGV----YNLTKSLALEWACSGIRINCVAPGVIYSQ 207

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F+  +      + + KP++GKV ++TGA  GIG   A+  A+  ATVV    
Sbjct: 186 SAYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVV---- 241
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I    A E LK+         + L++ + D++     +V + +  K+ +L+NNAG++ 
Sbjct: 242 -AIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT- 299
Query: 148 PIKEKLTT---KEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL     ++ ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 300 --RDKLLANMDEKRWDAVIAVNLLAPQRLTEGL---------VGNGTIGEGGRVIGLSSM 348
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    ADKG+ ++ V PG+  T +
Sbjct: 349 AGIAG--NRGQTN--YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLM 112
           M  ++  +TG   GIG    + L K    VV GC  +  R  + LE  K    D      
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD--FYAS 68
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           E N+  +DS K     V  +  +I VL+NNAG++  +  +  T+E ++     N    F 
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFN 128
Query: 173 LTNLLIERIQKVVIVGSSLMDRG---TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           +T  +I+           +++RG    I+  ++NG+KG  Q G +N  Y  +K   + F 
Sbjct: 129 VTKQVID----------GMVERGWGRIINISSVNGQKG--QFGQTN--YSTAKAGIHGFT 174
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
             L  + A KGV V+ V PG+  T++ +       +K++
Sbjct: 175 MSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIV 213

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA---LEKLKKEVQD 106
            YK +EGKV +ITG+++G+G   A   A  KA VV+  RS  +  EA   LE++KK    
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKK--VG 56
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G+ + ++ ++     + N  ++ +K++ K+ V+INNAG++ P+     +   +      N
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTN 116
Query: 167 HVGHFLLTNLLIE-----RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G FL +   I+      I+  VI  SS+ ++             FV        Y  S
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------FVH-------YAAS 161
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
           K         L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA---LEKLKKEVQD 106
            YK +EGKV +ITG+++G+G   A   A  KA VV+  RS  +  EA   LE++KK    
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKK--VG 56
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G+ + ++ ++     + N  ++ +K++ K+ V+INNAG+  P+     +   +      N
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 167 HVGHFLLTNLLIE-----RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G FL +   I+      I+  VI  SS+ ++             FV        Y  S
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------FVH-------YAAS 161
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
           K         L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA---LEKLKKEVQD 106
            YK +EGKV +ITG+++G+G   A   A  KA VV+  RS  +  EA   LE++KK    
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKK--VG 56
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G+ + ++ ++     + N  ++ +K++ K+ V+INNAG+  P+     +   +      N
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 167 HVGHFLLTNLLIE-----RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G FL +   I+      I+  VI  SS+ ++             FV        Y  S
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------FVH-------YAAS 161
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
           K         L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 162 KGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA---LEKLKKEVQD 106
            YK +EGKV +ITG+++G+G   A   A  KA VV+  RS  +  EA   LE++KK    
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKK--VG 56
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G+ + ++ ++     + N  ++ +K++ K+ V+INNAG+  P+     +   +      N
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 167 HVGHFLLTNLLIE-----RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G FL +   I+      I+  VI  SS+ ++             FV        Y  S
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------FVH-------YAAS 161
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
           K         L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN- 115
           +  ++TG N GIG+E  K+L+     VVL CR + +G EA+EKLK    +  +V  +L+ 
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDV 71
Query: 116 ---LASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
              +A+  S+ +F K     + K+ +L+NNAGV+
Sbjct: 72  TDPIATMSSLADFIKT---HFGKLDILVNNAGVA 102

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV ++TGA+ GIG+E A  LA   ATVV G  +     E  E   KE +  +   + LN+
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVV-GTATSQASAEKFENSXKE-KGFKARGLVLNI 63
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
           +  +SI+NF   +  +   I +L+NNAG+         T++        +     + TNL
Sbjct: 64  SDIESIQNFFAEIKAENLAIDILVNNAGI---------TRDNLXXRXSEDEWQSVINTNL 114
Query: 177 -LIERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
             I R  K  + G      G  I   ++ G  G    G +N  YC +K     F   L  
Sbjct: 115 SSIFRXSKECVRGXXKKRWGRIISIGSVVGSAG--NPGQTN--YCAAKAGVIGFSKSLAY 170
Query: 235 KYADKGVDVSVVCPGWCYTN 254
           + A + + V+VV PG+  T+
Sbjct: 171 EVASRNITVNVVAPGFIATD 190

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK--EVQDGQIVL 111
           ++GKV ++TG+ SGIG   A  LA   A +VL   +       +EK++     Q G  VL
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL---NGFGDAAEIEKVRAGLAAQHGVKVL 58
Query: 112 ME-LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVG 169
            +  +L+  ++++    N ++Q  +I +L+NNAG+    + E   T E ++    +N   
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSA 117
Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            F  T   +  ++K          +G     N+    G V   + + AY  +K     F 
Sbjct: 118 VFHGTAAALPHMKK----------QGFGRIINIASAHGLVASANKS-AYVAAKHGVVGFT 166
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
               L+ A +G+  + +CPGW  T L  
Sbjct: 167 KVTALETAGQGITANAICPGWVRTPLVE 194

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G    M 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG----MA 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           LN+ + +SI+   K +  ++  + +L+NNAG+         T++   +          + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI---------TRDNLLMRMKEEEWSDIME 115
Query: 174 TNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N  Y  +K     F   
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQAN--YAAAKAGVIGFTKS 171
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  + A +GV V+ V PG+  T++ +
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 58  VCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           V ++TG N GIG    ++L +L    VVL  R + RGQ A+++L+ E    +    +L++
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR--FHQLDI 63
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVS------VP--IKEKLTTKEGYEVHFGINHV 168
               SI+     + K+Y  + VL+NNAG++       P  I+ ++T K  +   FG   V
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNF---FGTRDV 120
Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRG---------------TIDFDNLNG--------- 204
              LL   LI+   +VV V S +  R                TI  + L G         
Sbjct: 121 XTELLP--LIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178
Query: 205 EKGFVQK-GHSNPAYCNSKL----MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           +KG  QK G  + AY  +K+    ++     +L  +     + ++  CPGW  T++
Sbjct: 179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK--EVQDGQIVL 111
           ++GKV ++TG+ SGIG   A  LA   A +VL   +       +EK++     Q G  VL
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL---NGFGDAAEIEKVRAGLAAQHGVKVL 58
Query: 112 ME-LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVG 169
            +  +L+  ++++    N ++Q  +I +L+NNAG+    + E   T E ++    +N   
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSA 117
Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            F  T   +  ++K          +G     N+    G V   + + AY  +K     F 
Sbjct: 118 VFHGTAAALPHMKK----------QGFGRIINIASAHGLVASANKS-AYVAAKHGVVGFT 166
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
               L+ A +G+  + +CPGW  + L  
Sbjct: 167 KVTALETAGQGITANAICPGWVRSPLVE 194

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G    M 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG----MA 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           LN+ + +SI+   K +  ++  + +L+NNAG+         T++   +          + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI---------TRDNLLMRMKEEEWSDIME 115
Query: 174 TNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N  Y  +K     F   
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQAN--YAAAKAGVIGFTKS 171
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  + A +GV V+ V PG   T++ +
Sbjct: 172 MAREVASRGVTVNTVAPGAIETDMTK 197

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G    M 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG----MA 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           LN+ + +SI+   K +  ++  + +L+NNAG+         T++   +          + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI---------TRDNLLMRMKEEEWSDIME 115
Query: 174 TNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N A   + ++   F   
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQANFAAAKAGVIG--FTKS 171
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  + A +GV V+ V PG+  T++ +
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 58  VCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           V ++TG N GIG    ++L +L    VVL  R + RGQ A+++L+ E    +    +L++
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR--FHQLDI 63
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVS------VP--IKEKLTTKEGYEVHFGINHV 168
               SI+     + K+Y  + VL+NNAG++       P  I+ ++T K  +   FG   V
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNF---FGTRDV 120
Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRG---------------TIDFDNLNG--------- 204
              LL   LI+   +VV V S +  R                TI  + L G         
Sbjct: 121 CTELLP--LIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178
Query: 205 EKGFVQK-GHSNPAYCNSKL----MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           +KG  QK G  + AY  +K+    ++     +L  +     + ++  CPGW  T++
Sbjct: 179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK--EVQDGQIVL 111
           ++GKV ++TG+ SGIG   A  LA   A +VL   +       +EK++     Q G  VL
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL---NGFGDAAEIEKVRAGLAAQHGVKVL 58
Query: 112 ME-LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVG 169
            +  +L+  ++++    N ++Q  +I +L+NNAG+    + E   T E ++    +N   
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSA 117
Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            F  T   +  ++K          +G     N+    G V   + + AY  +K     F 
Sbjct: 118 VFHGTAAALPHMKK----------QGFGRIINIASAHGLVASANKS-AYVAAKHGVVGFT 166
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
               L+ A +G+  + +CPGW    L  
Sbjct: 167 KVTALETAGQGITANAICPGWVRAPLVE 194

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG 107
            P    +EGKV +ITGA SG G   AK  AK  A VV+    + R +   E++  E+ D 
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVI----VDRDKAGAERVAGEIGDA 56
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGIN 166
            + +   +++    +    +  + ++ K+ +L+NNAG+   P   +L   E ++   G+N
Sbjct: 57  ALAVAA-DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVN 115
Query: 167 HVGHFLLTNLLI 178
             G +L+T+ LI
Sbjct: 116 VRGVYLMTSKLI 127

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVL 111
           + G+V ++TGA+ GIG   A++L  L A VVL  R +    E L  +++E+    G+   
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV----EKLRAVEREIVAAGGEAES 82
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
              +L+  D+I  FA  V+  + +  VL+NNAGV
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G    M 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG----MA 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           LN+ + +SI+   K +  ++  + +L+NNA +         T++   +          + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGGVDILVNNAAI---------TRDNLLMRMKEEEWSDIME 115
Query: 174 TNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N  Y  +K     F   
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQAN--YAAAKAGVIGFTKS 171
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  + A +GV V+ V PG+  T++ +
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
           KV +ITGA+ GIG   A+EL    A ++LG R   R    +E +  E++D  G  +   L
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVL 60
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           ++    S+  FA+  +  + +I VL+NNAGV
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV 91

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +E KV +ITGA+ GIG   A+ LA+    + LG RS+ R ++   +L +E Q  ++    
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHH 80
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
           L+++  +S++ F+K V++++  + V++ NAG+ 
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLG 113

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 45/237 (18%)
Query: 57  KVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           +V ++TGAN GIG+   ++L +     VVL  R + RGQ A+++L+ E    +    +L+
Sbjct: 5   RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 62
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS------VP--IKEKLTTKEGYEVHFGINH 167
           +    SI+     + K+Y  + VL+NNA ++       P  I+ +LT K  +    G  +
Sbjct: 63  IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNF---MGTRN 119
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRG---------------TIDFDNLNG-EKGFVQ- 210
           V   LL   LI+   +VV V S+   R                TI  + L G    FV+ 
Sbjct: 120 VCTELLP--LIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVED 177
Query: 211 --------KGHSNPAYCNSKL----MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                   +G S+  Y  +K+    ++  +  +L  + A   + ++  CPGW  T++
Sbjct: 178 TKNGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDM 234

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 57  KVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           +V ++TGAN GIG   A+EL +     VVL  R + RGQ A+++L+ E    +    +L+
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPR--FHQLD 60
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
           +    SI+     + K+Y  ++VL+NNA V+
Sbjct: 61  IDDLQSIRALRDFLRKEYGGLNVLVNNAAVA 91

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--G 107
            Y  ++ KV +ITG ++G+G   A    + +A VV+   +    +EAL+  KKEV++  G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYN--NEEEALDA-KKEVEEAGG 65
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           Q ++++ ++   + + N  +  +K++  + V+INNAGV  P+     + + +      N 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNL 125
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            G FL +   I+   +  I G+       I+  +++    +    H   +    KLM   
Sbjct: 126 TGAFLGSREAIKYFVENDIKGN------VINMSSVHEMIPWPLFVHYAASKGGMKLMT-- 177
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
               L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 178 --ETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G    M 
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG----MA 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           LN+ + +SI+   K +  ++  + +L+NNA +         T++   +          + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGGVDILVNNADI---------TRDNLLMRMKEEEWSDIME 115
Query: 174 TNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N  Y  +K     F   
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQAN--YAAAKAGVIGFTKS 171
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  + A +GV V+ V PG+  T++ +
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--G 107
            Y  ++ KV +ITG ++G+G   A    + +A VV+   +    +EAL+  KKEV++  G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYN--NEEEALDA-KKEVEEAGG 65
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           Q ++++ ++   + + N  +  +K++  + V+INNAGV  P+     + + +      N 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNL 125
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            G FL +   I+   +  I G+       I+  +++    +    H   +    KLM   
Sbjct: 126 TGAFLGSREAIKYFVENDIKGN------VINMSSVHEMIPWPLFVHYAASKGGMKLMT-- 177
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
               L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 178 --ETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--G 107
            Y  ++ KV +ITG ++G+G   A    + +A VV+   +    +EAL+  KKEV++  G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYN--NEEEALDA-KKEVEEAGG 65
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           Q ++++ ++   + + N  +  +K++  + V+INNAGV  P+     + + +      N 
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNL 125
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            G FL +   I+   +  I G+       I+  +++    +    H   +    KLM   
Sbjct: 126 TGAFLGSREAIKYFVENDIKGN------VINMSSVHEMIPWPLFVHYAASKGGMKLMT-- 177
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYT--NLFRHAD 260
               L L+YA KG+ V+ + PG   T  N  + AD
Sbjct: 178 --ETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           E KV +ITGA+ GIG   A+ LA+    + LG RS+ R ++   +L +E Q  ++    L
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHL 59
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +++  +S++ F+K V++++  + V++ NAG+
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
           +  +EGKV ++TGA+ GIG   A+ LA+  A V+ G  +   G +A+     +   G   
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVI-GTATSESGAQAISDYLGDNGKG--- 59
Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
              LN+ + +SI+   K +  ++  + +L+NNAG++   ++ L  +   E    I     
Sbjct: 60  -XALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLXRXKEEEWSDIXE--- 112
Query: 171 FLLTNLL-IERIQKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
              TNL  I R+ K V+ G     +G  I+  ++ G  G    G +N  Y  +K     F
Sbjct: 113 ---TNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVGTXG--NAGQAN--YAAAKAGVIGF 165
Query: 229 GAELYLKYADKGVDVSVVCPGWCYTN 254
                 + A +GV V+ V PG+  T+
Sbjct: 166 TKSXAREVASRGVTVNTVAPGFIETD 191

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EGK+ ++TGA+ GIG   A+ LA   A V+ G  +   G +A+         G   LM L
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKG---LM-L 58
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK---EGYEVHFGINHVGHF 171
           N+    SI++  + +  ++ ++ +L+NNAG++   ++ L  +   E +      N    F
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGIT---RDNLLMRMKDEEWNDIIETNLSSVF 115
Query: 172 LLTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            L+      ++ +R  +++ +GS +   GT+     NG       G +N A   + L+  
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGSVV---GTMG----NG-------GQANYAAAKAGLIG- 160
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
            F   L  + A +G+ V+VV PG+  T++ R
Sbjct: 161 -FSKSLAREVASRGITVNVVAPGFIETDMTR 190

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 34/264 (12%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           Y+P    ++ ++ ++TGA+ GIG E A   A+  ATV+L    + R +E L ++ + + D
Sbjct: 5   YQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL----LGRNEEKLRRVAQHIAD 60
Query: 107 GQIV-----LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEG 158
            Q V      ++L   + +  +  A  +   YP++  +++NAG+     P+ E+    + 
Sbjct: 61  EQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQ--DPQI 118
Query: 159 YEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPA 217
           ++    +N    F+LT  L+  + K         D G++ F + + G +G    G    A
Sbjct: 119 WQDVMQVNVNATFMLTQALLPLLLKS--------DAGSLVFTSSSVGRQGRANWG----A 166
Query: 218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV 277
           Y  SK         L  +Y ++ + V+ + PG   T++   A      + +  P  +M +
Sbjct: 167 YATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLKTPADIMPL 226
Query: 278 ---IVGSSLMDRGTIDFDNLNGEK 298
              ++G     +  + FD   G K
Sbjct: 227 YLWLMGDDSRRKTGMTFDAQPGRK 250

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EGK+ ++TGA+ GIG   A+ LA   A V+ G  +   G +A+         G   LM L
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKG---LM-L 58
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK---EGYEVHFGINHVGHF 171
           N+    SI++  + +  ++ ++ +L+NNAG++   ++ L  +   E +      N    F
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGIT---RDNLLMRMKDEEWNDIIETNLSSVF 115
Query: 172 LLTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            L+      ++ +R  +++ +GS +   GT+     NG       G +N A   + L+  
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGSVV---GTMG----NG-------GQANFAAAKAGLIG- 160
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
            F   L  + A +G+ V+VV PG+  T++ R
Sbjct: 161 -FSKSLAREVASRGITVNVVAPGFIETDMTR 190

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEK-LKKEVQDGQIVLMELN 115
           K  IITG+++GIG  TA   A+  A V +  RS  R +E  +  LK  V + Q+  +  +
Sbjct: 7   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 66
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP 148
           + + D       + +KQ+ KI VL+NNAG ++P
Sbjct: 67  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP 99

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL-EKLKKEVQDGQIVLM 112
           ++GKV ++TGA+ GIG   A EL +L A VV+G  +   G E + E LK    +G  ++ 
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETLKANGVEGAGLV- 82
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            L+++S +S+    +++ +   +  +++NNAG++   ++ L  +   +  F + +     
Sbjct: 83  -LDVSSDESVAATLEHIQQHLGQPLIVVNNAGIT---RDNLLVRMKDDEWFDVVN----- 133
Query: 173 LTNL-LIERIQKVVIVGSSLMDRG-TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
            TNL  + R+ K V+ G +    G  I+  ++ G  G    G +N  Y  +K     F  
Sbjct: 134 -TNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMG--NAGQTN--YAAAKAGLEGFTR 188
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRH 258
            L  +   + + V+ V PG+  T++ R 
Sbjct: 189 ALAREVGSRAITVNAVAPGFIDTDMTRE 216

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV ++TGA  GIG   A+ L    A V L   ++  G +    L ++ +  + + ++
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            ++A    +++  + V+  + ++ +L+NNAGV+         ++ +E    IN V     
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISG 116
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYYFGAE 231
           T L ++ + K       ++    I+  +L G     Q+    P YC SK  ++ +   A 
Sbjct: 117 TYLGLDYMSKQNGGEGGII----INMSSLAGLMPVAQQ----PVYCASKHGIVGFTRSAA 168
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           L     + GV ++ +CPG+  T +  
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAILE 194

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F   +      + + KP++GKV I+TGA  GIG   A+  A+  A VV    
Sbjct: 170 SAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV---- 225
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I  + A E L +         + L++ + D++   ++++   +  K  +L+NNAG++ 
Sbjct: 226 -AIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT- 283
Query: 148 PIKEKLTTK---EGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL        ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 284 --RDKLLANMDDARWDAVLAVNLLAPLRLTEGL---------VGNGSIGEGGRVIGLSSI 332
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    A KG+ ++ V PG+  T +
Sbjct: 333 AGIAG--NRGQTN--YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 381

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F   +      + + KP++GKV I+TGA  GIG   A+  A+  A VV    
Sbjct: 186 SAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV---- 241
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I  + A E L +         + L++ + D++   ++++   +  K  +L+NNAG++ 
Sbjct: 242 -AIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT- 299
Query: 148 PIKEKLTTK---EGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL        ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 300 --RDKLLANMDDARWDAVLAVNLLAPLRLTEGL---------VGNGSIGEGGRVIGLSSI 348
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    A KG+ ++ V PG+  T +
Sbjct: 349 AGIAG--NRGQTN--YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 397

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F   +      + + KP++GKV I+TGA  GIG   A+  A+  A VV    
Sbjct: 194 SAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV---- 249
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I  + A E L +         + L++ + D++   ++++   +  K  +L+NNAG++ 
Sbjct: 250 -AIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT- 307
Query: 148 PIKEKLTTK---EGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL        ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 308 --RDKLLANMDDARWDAVLAVNLLAPLRLTEGL---------VGNGSIGEGGRVIGLSSI 356
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    A KG+ ++ V PG+  T +
Sbjct: 357 AGIAG--NRGQTN--YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 405

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F   +      + + KP++GKV I+TGA  GIG   A+  A+  A VV    
Sbjct: 207 SAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV---- 262
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I  + A E L +         + L++ + D++   ++++   +  K  +L+NNAG++ 
Sbjct: 263 -AIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT- 320
Query: 148 PIKEKLTTK---EGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL        ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 321 --RDKLLANMDDARWDAVLAVNLLAPLRLTEGL---------VGNGSIGEGGRVIGLSSI 369
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    A KG+ ++ V PG+  T +
Sbjct: 370 AGIAG--NRGQTN--YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 418

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 29  SALVISRYFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR 88
           SA V  + F   +      + + KP++GKV I+TGA  GIG   A+  A+  A VV    
Sbjct: 178 SAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV---- 233
Query: 89  SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSV 147
             I  + A E L +         + L++ + D++   ++++   +  K  +L+NNAG++ 
Sbjct: 234 -AIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT- 291
Query: 148 PIKEKLTTK---EGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRG--TIDFDNL 202
             ++KL        ++    +N +    LT  L         VG+  +  G   I   ++
Sbjct: 292 --RDKLLANMDDARWDAVLAVNLLAPLRLTEGL---------VGNGSIGEGGRVIGLSSI 340
Query: 203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            G  G   +G +N  Y  +K         L    A KG+ ++ V PG+  T +
Sbjct: 341 AGIAG--NRGQTN--YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 389

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV IITG   GIG   A +  +  A V++  R    G++A + +       QI   +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQ 60
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            + +  D          K +  +  L+NNAG++V    + TT   +     +N  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK---GHSNPAYCNSKLMNYYFGA 230
           T L I+R++   + G+S+++  +I+        GFV     G  N +    ++M+     
Sbjct: 121 TRLGIQRMKNKGL-GASIINMSSIE--------GFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
           +  LK  D  V V+ V PG+  T L
Sbjct: 172 DCALK--DYDVRVNTVHPGYIKTPL 194

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV IITG   GIG   A +  +  A V++  R    G++A + +       QI   +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTP---DQIQFFQ 60
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            + +  D          K +  +  L+NNAG++V    + TT   +     +N  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK---GHSNPAYCNSKLMNYYFGA 230
           T L I+R++   + G+S+++  +I+        GFV     G  N +    ++M+     
Sbjct: 121 TRLGIQRMKNKGL-GASIINMSSIE--------GFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
           +  LK  D  V V+ V PG+  T L
Sbjct: 172 DCALK--DYDVRVNTVHPGYIKTPL 194

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG---QIV 110
           ++GK  ++TG+ SGIG   A ELAK  A VV+         E +E+ +  ++     +  
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQ---PEDIERERSTLESKFGVKAY 58
Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHV 168
            +  +L+   + ++F     +    + +L+NNAG+  + PI+E    K    +   ++ V
Sbjct: 59  YLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAV 118
Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
            H     L I            +  +G     N+    G V   + + AY  +K      
Sbjct: 119 FHGTAAALPI------------MQKQGWGRIINIASAHGLVASVNKS-AYVAAKHGVVGL 165
Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                L+ A KG+  + +CPGW  T L  
Sbjct: 166 TKVTALENAGKGITCNAICPGWVRTPLVE 194

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLM 112
           ++GKV ++TGA+ GIG   A +LAK  A VV+    +  +  E ++++KK   D   + +
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA--IAV 59
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK---EGYEVHFGINHVG 169
             ++A+ + + N  K  +  + ++ +L+NNAGV+   K+ L  +   E ++     N  G
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT---KDNLLMRMKEEEWDTVINTNLKG 116
Query: 170 HFLLTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            FL T      ++ +R  ++V + S +   G                G +N  Y  +K  
Sbjct: 117 VFLCTKAVSRFMMRQRHGRIVNIASVVGVTG--------------NPGQAN--YVAAKAG 160
Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                     + A + + V+ + PG+  T++
Sbjct: 161 VIGLTKTSAKELASRNITVNAIAPGFIATDM 191

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQI 109
           Y+ ++ KV I+TGA SGIG   AK+ A L  ++V+    +   ++ L ++ +E++  G+ 
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELL---EDRLNQIVQELRGMGKE 57
Query: 110 VL-MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGI 165
           VL ++ +++    ++ F +   + Y +I VL NNAG+     P+ E   + E +E    +
Sbjct: 58  VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAE--VSDELWERVLAV 115
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           N    F  +  +I  + K          +G I +  ++ G +G    G +   Y  +K  
Sbjct: 116 NLYSAFYSSRAVIPIMLK--------QGKGVIVNTASIAGIRG----GFAGAPYTVAKHG 163
Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                  +   Y D+G+    V PG   TN+
Sbjct: 164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI 194

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K + G++ +ITGA  GIG  TA E AKLK+ +VL   +    +E   K K      ++  
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG--LGAKVHT 84
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
             ++ ++ + I + AK V  +   + +L+NNAGV        T     E  F +N + HF
Sbjct: 85  FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 144
Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGH-SNP---AYCNSK 222
             T   +  + K     +V V S+                     GH S P   AYC+SK
Sbjct: 145 WTTKAFLPAMTKNNHGHIVTVASA--------------------AGHVSVPFLLAYCSSK 184
Query: 223 LMNYYFGAELYLKYAD---KGVDVSVVCPGWCYTNLFRH 258
                F   L  + A     GV  + +CP +  T   ++
Sbjct: 185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN 223

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 82/210 (39%), Gaps = 36/210 (17%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ--EALEKLKKEVQDGQIVL 111
           +  K+ +ITGA SGIG   AK        V  G R  I G+  + L+    E+  G + +
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRF------VAEGARVFITGRRKDVLDAAIAEIGGGAVGI 80
Query: 112 M--ELNLASFDSIKNFAKNVMKQYPKIHVLINNA--GVSVPIKEKLTTKEGYEVHFGINH 167
                NLA  D +    + V  +  +I VL  NA  G  +P+ E   T+E Y+  F  N 
Sbjct: 81  QADSANLAELDRLY---EKVKAEAGRIDVLFVNAGGGSXLPLGE--VTEEQYDDTFDRNV 135
Query: 168 VGHFLLTN---LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            G          L+ R   VV+ GS+    GT  F                  Y  SK  
Sbjct: 136 KGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFS----------------VYAASKAA 179
Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
              F     L   D+G+ ++ + PG   T 
Sbjct: 180 LRSFARNWILDLKDRGIRINTLSPGPTETT 209

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+V ++TG + G+G+  A+ LA+   +VV+  R++    EA +KL  E    + +   
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL-TEKYGVETMAFR 77
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS-------VPIKEKLTTKEGYEVH-FGI 165
            ++++++ +K   + V +++ K+  ++N AG++        P+ E    ++  EV+ FG 
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE---FRQVIEVNLFGT 134
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            +V     + L       ++ +GS  ++   +   N++             AY  SK   
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEE--VTMPNIS-------------AYAASKGGV 179
Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
                 L  ++   G+ V+V+ PGW  T +
Sbjct: 180 ASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE--VQDGQIVL 111
           ++GKV ++TG+  GIG   A++LA   +TV++   S  R +   E++  +  V+   +  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV-- 62
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG---YEVHFGINHV 168
            E+NL S +SI    + +      I +L+NNAG++   ++KL  +     +E    +N  
Sbjct: 63  -EMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT---RDKLFLRMSLLDWEEVLKVNLT 118
Query: 169 GHFLLTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
           G FL+T      ++ +R  ++V + S +   G +              G  N  Y  +K 
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV--------------GQVN--YSTTKA 162
Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
               F   L  + A + V V+ V PG+  T++
Sbjct: 163 GLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 56  GKVCIITGANSGIGYETAKELAKLKATVV-LGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           G+  ++TG +SGIG   A + A+L A VV LG  +         ++++E         EL
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRRE---------EL 61
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEG-YEVHFGINHVGHFL 172
           ++     ++       +  P++ VL+NNAG+S   +E  L T E    ++     +   L
Sbjct: 62  DITDSQRLQRL----FEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQL 117
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
              LL +R   ++ + S     G+ D                 PAY  SK         L
Sbjct: 118 ARPLLAQRGGSILNIASMYSTFGSAD----------------RPAYSASKGAIVQLTRSL 161
Query: 233 YLKYADKGVDVSVVCPGWCYTNLFR--HADIKFYQKVM 268
             +YA + + V+ + PGW  T L     AD++  +++M
Sbjct: 162 ACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIM 199

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELN 115
           V +ITGA SGIG  TA  LA    TV     ++ R +  +E++  E+    GQ + +E +
Sbjct: 30  VALITGAGSGIGRATALALAADGVTV----GALGRTRTEVEEVADEIVGAGGQAIALEAD 85
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGHFL 172
           ++     +N  ++++ ++  + +++ NAG++    PI + L   E ++    +N  G FL
Sbjct: 86  VSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPI-DDLKPFE-WDETIAVNLRGTFL 143
Query: 173 LTNLLI----ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             +L +    +R    ++V SS           +NG + F   G +  AY  +K      
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSS-----------INGTRTFTTPGAT--AYTATKAAQVAI 190
Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
             +L L+     + V+ VCPG   TN+  +  ++  ++  I
Sbjct: 191 VQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAI 231

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 36  YFKSRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE 95
           YF+S +       PF   + G+  ++TGA SGIG   A   A+  A V+   R+     +
Sbjct: 19  YFQSMT------GPF--SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----D 65
Query: 96  ALEKLKKEVQD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG-VSVPIKEK 152
            ++++  E+ D  G    +  +LA  +   N A+  +    ++ VL+NNAG ++    E+
Sbjct: 66  GVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEE 124
Query: 153 LTTKEGYEVHFGINHVGHFLL-----TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKG 207
           ++     EV   +N    ++L     T +L     ++V + S L                
Sbjct: 125 VSLGRWREV-LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS--------------- 168
Query: 208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
             Q G +  AY  SK         L  ++A +GV V+ + PG+  T
Sbjct: 169 -FQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVT 213

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 57  KVCIITGANSGIGYETAKELAKLKAT-----VVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K  +ITGA++GIG  TA E   L+A+     ++L  R + + +E  + + +E  + ++ +
Sbjct: 34  KTVLITGASAGIGKATALEY--LEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHV 91
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE--KLTTKEGYEVHFGINHVG 169
            +L++   + IK F +N+ +++  I +L+NNAG ++      ++ T++  +V F  N   
Sbjct: 92  AQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV-FDTN--- 147
Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
                  LI   Q V+ +  +      ++  ++ G   +     +   YC SK     F 
Sbjct: 148 ----VTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY----PTGSIYCASKFAVGAFT 199
Query: 230 AELYLKYADKGVDVSVVCPGWCYT 253
             L  +  +  + V ++ PG   T
Sbjct: 200 DSLRKELINTKIRVILIAPGLVET 223

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           K  I+TG N GIG    + +A   A V +  RS     E  EK+ KE    +    + ++
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDV 73
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF----L 172
           ++ D +    + +      I  LI NAGVSV       T E +   + +N  G F     
Sbjct: 74  SNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRA 133
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           +  L +++ QK  IV +S M    I+  +LNG    V   +S+ A C++ +        L
Sbjct: 134 VAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFY-NSSKAACSNLVKG------L 186
Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
             ++A  G+ V+ + PG+  T+   H D K 
Sbjct: 187 AAEWASAGIRVNALSPGYVNTDQTAHMDKKI 217

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV +ITG++SGIG   A+  AK  A +VL  R + R  EA   LK++    +++ + 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVA 63
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           +++A+ + +    ++V   +    +L+NNAG
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAG 94

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV +ITG++SGIG   A+  AK  A +VL  R + R  EA   LK++    +++ + 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVA 63
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
           +++A+ + +    ++V   +    +L+NNAG
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAG 94

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 35/246 (14%)
Query: 58  VCIITGANSGIGYETAKELAK-------LKATVVLGCRSMIRGQEALEKLKKEVQ-DGQI 109
           + +ITGA  GIG   A E A+        +  +VL  R+       LEK+  E + +G +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT----AADLEKISLECRAEGAL 59
Query: 110 V-LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
              +  +++    ++    +++++Y  I  L+NNAGV         T+E ++     N  
Sbjct: 60  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119
Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDR---GTIDF-DNLNGEKGFVQKGHSNPAYCNSKLM 224
           G F LT  L            +LM+R   G I F  ++   K F    HS+  YC SK  
Sbjct: 120 GTFFLTQALF-----------ALMERQHSGHIFFITSVAATKAF---RHSS-IYCMSKFG 164
Query: 225 NYYFGAELYLKYADK-GVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSL 283
                  + L YA K  V ++ V PG  YT ++   D +  Q +M+ P  +   +V + L
Sbjct: 165 QRGLVETMRL-YARKCNVRITDVQPGAVYTPMWGKVDDEM-QALMMMPEDIAAPVVQAYL 222
Query: 284 MDRGTI 289
               T+
Sbjct: 223 QPSRTV 228

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV ++TGA+SG G   A+       TV+       R  EAL+ L     D +   + L++
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVI----GTARRTEALDDLVAAYPD-RAEAISLDV 60
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAG-VSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
              + I   A +V+ +Y ++ VL+NNAG   V   E+ T +E  ++ F ++  G   LT 
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDL-FELHVFGPARLTR 119
Query: 176 LLIERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
            L+ + +          +RG+   ++  +  G+  F   G S  AY  +K         L
Sbjct: 120 ALLPQXR----------ERGSGSVVNISSFGGQLSFA--GFS--AYSATKAALEQLSEGL 165
Query: 233 YLKYADKGVDVSVVCPGWCYTNLF 256
             + A  G+ V +V PG   TNLF
Sbjct: 166 ADEVAPFGIKVLIVEPGAFRTNLF 189

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL-EKLKKEVQDGQIV 110
           K ++ +V I+TGA+ GIG   A ELA+ +  +V+G  +   G E +    K+   +G+  
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELAR-RGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82
Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK---EGYEVHFGINH 167
           ++ +N A+  ++    ++ +K++  ++VL+NNAG++   +++L  +   + ++     N 
Sbjct: 83  VLNVNDAT--AVDALVESTLKEFGALNVLVNNAGIT---QDQLAMRMKDDEWDAVIDTNL 137
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGT--IDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
              F L+  ++  + K          RG   ++  ++ G  G    G  N  Y  +K   
Sbjct: 138 KAVFRLSRAVLRPMMKA---------RGGRIVNITSVVGSAG--NPGQVN--YAAAKAGV 184
Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                 L  +   +G+ V+ V PG+  T++ +
Sbjct: 185 AGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EGK+ ++TGA+ GIG   A+ LA   A V+ G  +   G +A+         G   LM L
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVI-GTATSENGAQAISDYLGANGKG---LM-L 58
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           N+    SI++  + +  ++ ++ +L+NNAG+         T++   +          + T
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGI---------TRDNLLMRMKDEEWNDIIET 109
Query: 175 NL-LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
           NL  + R+ K V+        G I              G +N A   + L+   F   L 
Sbjct: 110 NLSSVFRLSKAVMRAMMKKRHGRI----------ITIGGQANYAAAKAGLIG--FSKSLA 157
Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADI 261
            + A +G+ V+VV PG+  T+  + A I
Sbjct: 158 REVASRGITVNVVAPGFIETSDDQRAGI 185

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMI---RGQEALEKLKKEVQ--DGQIVLM 112
           V ++TGA+ GIG   A  L K       GC+ ++   R  +A E++ K+++   GQ +  
Sbjct: 3   VVVVTGASRGIGKAIALSLGK------AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF 56
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             +++    ++   K  +  +  I V++NNAG++         K  ++    +N  G FL
Sbjct: 57  GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFL 116
Query: 173 LTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            T      ++ +R  +++ + S +   G I              G +N  Y  +K     
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNI--------------GQAN--YAAAKAGVIG 160
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNL 255
           F      + A + ++V+VVCPG+  +++
Sbjct: 161 FSKTAAREGASRNINVNVVCPGFIASDM 188

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
           PM G+VC++TGA+ GIG   A +L K  ATV +  R +    + L  + +E Q   GQ V
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHL----DTLRVVAQEAQSLGGQCV 57
Query: 111 LMELNLASFDSIKNFAKNV-MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFG----I 165
            +  + +    +++  + V  +Q  ++ VL+NNA   V        K  +E        I
Sbjct: 58  PVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDI 117
Query: 166 NHV---GHFLLT----NLLIERIQKVVIVGSS 190
           N+V   GH+  +     L++   Q +++V SS
Sbjct: 118 NNVGLRGHYFCSVYGARLMVPAGQGLIVVISS 149

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ-IVLMELN 115
           +V  +TG   G+G   ++ L    A + +      R       L  E   G+      ++
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHD--AGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           +A F+S +  A+ V+  + K+ VLINNAG++        TK  ++     +    F +T 
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTK 143
Query: 176 LLI-----ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
             I      R  ++V +GS            +NG +G    G +N  Y ++K   + F  
Sbjct: 144 QFIAGMVERRFGRIVNIGS------------VNGSRGAF--GQAN--YASAKAGIHGFTK 187
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            L L+ A +G+ V+ V PG+  T +
Sbjct: 188 TLALETAKRGITVNTVSPGYLATAM 212

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVV---LGC---RSMIRGQEALEKLKKEV--Q 105
           ++G+V I+TGA  GIG   A   A   A VV   +G     S   G  A + +  E+   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVH 162
            G+ V    N+A +D      +  ++ +  + VL+NNAG+   +++++   T++E ++  
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEEEFDAV 141
Query: 163 FGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
             ++  GHF          + +   G ++  R  I+  +  G +G V +G+ + A     
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGR-IINTSSGAGLQGSVGQGNYSAAKAGIA 200
Query: 223 LMNYYFGAELYLKYADKGVDVSVVCP 248
            +     AE+  +Y   GV V+ + P
Sbjct: 201 TLTLVGAAEMG-RY---GVTVNAIAP 222

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 17/213 (7%)
Query: 47  ASPFYKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKE 103
           AS  Y P  ++GKV ++TG+  GIG   A  L +L A VV+    S    ++ + ++K  
Sbjct: 7   ASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL 66
Query: 104 VQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
             D   + ++ ++     I       +  +  + + ++N+GV      K  T+E ++  F
Sbjct: 67  GSDA--IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVF 124
Query: 164 GINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
            +N  G F +                 L + G I   + N  K F    HS   Y  SK 
Sbjct: 125 SLNTRGQFFVAREAYRH----------LTEGGRIVLTSSNTSKDFSVPKHS--LYSGSKG 172
Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
               F         DK + V+ V PG   T++F
Sbjct: 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF 205

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K   G+   +TG  +G+G    ++L      V +         +AL  L+ E    +++ 
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKE----GYEVHFGI 165
           ++L++AS +  K  A  V  ++  + +L NNAGV++  PI+E          G  +H  +
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
           N V  F+    ++ER++     G  +++  ++          F+  G S   Y  +K   
Sbjct: 124 NGVTTFVPR--MVERVKAGEQKGGHVVNTASM--------AAFLAAG-SPGIYNTTKFAV 172
Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
                 L+       + VSV+CPG   + ++   DI+
Sbjct: 173 RGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIR 209

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLM 112
           + G+  ++TGA  G+G   A+ L    A V L G R     +E L++L  E+ + +I + 
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----EEKLKELAAELGE-RIFVF 58
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             NL+  +++K   +   ++   + +L+NNAG++        + E ++    +N    F 
Sbjct: 59  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 118
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           LT  L   + +         +   I+  ++ G  G    G +N  YC SK     F   L
Sbjct: 119 LTRELTHPMMR-------RRNGRIINITSIVGVTG--NPGQAN--YCASKAGLIGFSKSL 167
Query: 233 YLKYADKGVDVSVVCPGWCYTNL 255
             + A + V V+ + PG+  + +
Sbjct: 168 AQEIASRNVTVNCIAPGFIESAM 190

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  +ITG+  GIG   A+   +  A V +   ++    EA      E+      +  
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINL----EAARATAAEIGPAACAIA- 57
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
           L++    SI      ++ ++  I +L+NNA +    PI E   T+E Y+  F IN  G  
Sbjct: 58  LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE--ITRESYDRLFAINVSG-- 113
Query: 172 LLTNLLIERIQKVVIVGSSLMDRG--TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
             T  +++ + + +I G     RG   I+  +  G +G    G     YC +K       
Sbjct: 114 --TLFMMQAVARAMIAGG----RGGKIINMASQAGRRGEALVG----VYCATKAAVISLT 163
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
               L     G++V+ + PG      +   D KF
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKF 197

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  I+TG + GIG   A+ L K  ATV +    ++  Q  +  L    ++G   + E
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----ENGGFAV-E 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           +++    S+    +  +       +L  NAGVS        T E ++ +F +N  G FL 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 174 TNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
             +     +    K VIV ++          +L  + G     H    Y  SK   + + 
Sbjct: 125 NQIACRHFLASNTKGVIVNTA----------SLAAKVGAPLLAH----YSASKFAVFGWT 170
Query: 230 AELYLKYADKGVDVSVVCPGWCYTNL 255
             L  + A K + V+ VCPG+  T +
Sbjct: 171 QALAREMAPKNIRVNCVCPGFVKTAM 196

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLM 112
           + G+  ++TGA  G+G   A+ L    A V L G R     +E L++L  E+ + +I + 
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----EEKLKELAAELGE-RIFVF 61
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             NL+  +++K   +   ++   + +L+NNAG++        + E ++    +N    F 
Sbjct: 62  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 121
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           LT  L   + +         +   I+  ++ G  G    G +N  YC SK     F   L
Sbjct: 122 LTRELTHPMMR-------RRNGRIINITSIVGVTG--NPGQAN--YCASKAGLIGFSKSL 170
Query: 233 YLKYADKGVDVSVVCPGWCYTNL 255
             + A + V V+ + PG+  + +
Sbjct: 171 AQEIASRNVTVNCIAPGFIESAM 193

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           Y+P    ++ ++ ++TGA+ GIG E A   A+  ATV+L    + R +E L ++ + + D
Sbjct: 6   YQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL----LGRNEEKLRRVAQHIAD 61
Query: 107 GQIV-----LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            Q V      ++L   + +  +  A  +   YP++  +++NAG+
Sbjct: 62  EQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGL 105

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-----QIVLM 112
           + IITGA+ GIG   A  LA     VVL  RS    ++ LEK+  E+        + +++
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARS----KQNLEKVHDEIXRSNKHVQEPIVL 64
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG------VSVPIKEKLTTKEGYEVHFGIN 166
            L++          K++ ++Y  + +L+N A       +S P+       + +     IN
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV-------DNFRKIXEIN 117
Query: 167 HVGHF--LLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSKL 223
            +  +  L T   I ++QK           G I +  +   + GF   G     Y ++K 
Sbjct: 118 VIAQYGILKTVTEIXKVQK----------NGYIFNVASRAAKYGFADGG----IYGSTKF 163
Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVI 278
                   LY + A  G+ V+ +CPGW  T+  + A   F  +  I P  ++  I
Sbjct: 164 ALLGLAESLYRELAPLGIRVTTLCPGWVNTDXAKKAGTPFKDEEXIQPDDLLNTI 218

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  +ITGA+SGIG   A+ L KL + V++   +    +E L+ L   ++D   + + 
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN----EEKLKSLGNALKDNYTIEV- 66
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            NLA+    K    N++ +   + +L+ NAG++          + ++    IN   +F+L
Sbjct: 67  CNLAN----KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
                E I+K++        R  I+  ++ G  G    G +N  YC SK         L 
Sbjct: 123 NR---EAIKKMI---QKRYGR-IINISSIVGIAG--NPGQAN--YCASKAGLIGMTKSLS 171
Query: 234 LKYADKGVDVSVVCPGWCYTNL 255
            + A +G+ V+ V PG+  +++
Sbjct: 172 YEVATRGITVNAVAPGFIKSDM 193

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 17/213 (7%)
Query: 47  ASPFYKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKE 103
           AS  Y P  ++GKV ++TG+  GIG   A  L +L A VV+    S    ++ + ++K  
Sbjct: 7   ASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL 66
Query: 104 VQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
             D   + ++ ++     I       +  +  + + ++N+GV      K  T+E ++  F
Sbjct: 67  GSDA--IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVF 124
Query: 164 GINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
            +N  G F +                 L + G I   + N  K F    HS   +  SK 
Sbjct: 125 SLNTRGQFFVAREAYRH----------LTEGGRIVLTSSNTSKDFSVPKHS--LFSGSKG 172
Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
               F         DK + V+ V PG   T++F
Sbjct: 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF 205

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-Q 105
           Y+P    +  ++ ++TGA+ GIG E A   A+  ATV+L  R+  + ++    + +E  +
Sbjct: 5   YQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 64
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVH 162
             Q  +++L   + +  +  A+ +   YP++  +++NAG+     P+ E+    + ++  
Sbjct: 65  QPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQ--DPQVWQDV 122
Query: 163 FGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPAYCNS 221
             +N    F+LT  L+  + K         D G++ F + + G +G    G    AY  S
Sbjct: 123 MQVNVNATFMLTQALLPLLLKS--------DAGSLVFTSSSVGRQGRANWG----AYAAS 170
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV---I 278
           K         L  +Y  + + V+ + PG   T +   A      + +  P  +M +   +
Sbjct: 171 KFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWL 229
Query: 279 VGSSLMDRGTIDFDNLNGEK-GFVQKG 304
           +G     +  + FD   G K G  Q+G
Sbjct: 230 MGDDSRRKTGMTFDAQPGRKPGISQEG 256

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVL 111
           ++GK  ++TG+ +GIG   A  L    A V++  R      E +++++ +  D   Q V+
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK 150
            +L        +   ++V+++YPK+ +LINN G+  P++
Sbjct: 68  ADLG------TEQGCQDVIEKYPKVDILINNLGIFEPVE 100

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 37/215 (17%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG 107
           +PF   +EG+  ++TGAN+G+G   A  LA   A VV  C +     E L+ + K+  + 
Sbjct: 3   NPF--SLEGRKALVTGANTGLGQAIAVGLAAAGAEVV--CAARRAPDETLDIIAKDGGNA 58
Query: 108 QIVLMELN--LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
             +L++    LA+ DS  +             +L+NNAG+         ++  ++    +
Sbjct: 59  SALLIDFADPLAAKDSFTD---------AGFDILVNNAGIIRRADSVEFSELDWDEVMDV 109
Query: 166 NHVGHFLLTNLLIE------RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYC 219
           N    F  T    +      R  KVV + S L  +G I                  P+Y 
Sbjct: 110 NLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV----------------PSYT 153
Query: 220 NSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
            +K         L  ++A KG++V+ + PG+  TN
Sbjct: 154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETN 188

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + ++G V +ITG  SG+G  TAK L    AT VL       G+   +KL      G  + 
Sbjct: 5   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL-----GGNCIF 59
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI------KEKLTTKEGYEVHFGI 165
              N+ S   ++       +++ +I V +N AG++V I      K ++ T E ++    +
Sbjct: 60  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-----------QKGHS 214
           N +G F +  L+        ++G +  D+G        G++G +           Q G +
Sbjct: 120 NLIGTFNVIRLVAG------VMGQNEPDQG--------GQRGVIINTASVAAFEGQVGQA 165
Query: 215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
             AY  SK         +    A  G+ V  + PG   T L 
Sbjct: 166 --AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLL 205

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + ++G V +ITG  SG+G  TAK L    AT VL       G+   +KL      G  + 
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL-----GGNCIF 60
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI------KEKLTTKEGYEVHFGI 165
              N+ S   ++       +++ +I V +N AG++V I      K ++ T E ++    +
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-----------QKGHS 214
           N +G F +  L+        ++G +  D+G        G++G +           Q G +
Sbjct: 121 NLIGTFNVIRLVAG------VMGQNEPDQG--------GQRGVIINTASVAAFEGQVGQA 166
Query: 215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
             AY  SK         +    A  G+ V  + PG   T L 
Sbjct: 167 --AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLL 206

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + ++G V +ITG  SG+G  TAK L    AT VL       G+   +KL      G  + 
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL-----GGNCIF 60
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI------KEKLTTKEGYEVHFGI 165
              N+ S   ++       +++ +I V +N AG++V I      K ++ T E ++    +
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-----------QKGHS 214
           N +G F +  L+        ++G +  D+G        G++G +           Q G +
Sbjct: 121 NLIGTFNVIRLVAG------VMGQNEPDQG--------GQRGVIINTASVAAFEGQVGQA 166
Query: 215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
             AY  SK         +    A  G+ V  + PG   T L 
Sbjct: 167 --AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLL 206

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G    +TGA SGIG E  +  A   A ++L    + R   AL++  +E+       + 
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLIL----IDREAAALDRAAQELGAAVAARIV 64
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGHFL 172
            ++   +++   A       P + +L+N+AG++  + + L T +  +     +N  G F 
Sbjct: 65  ADVTDAEAMTAAAAEAEAVAP-VSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFW 122
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKG-FVQKGHSNPAYCNSKLMNYYFGAE 231
            +             G +++ RG     NL    G  V +     +Y  SK   +     
Sbjct: 123 ASRAF----------GRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRA 172
Query: 232 LYLKYADKGVDVSVVCPGWCYTNL 255
           L  ++A +GV V+ + PG+  T +
Sbjct: 173 LAAEWAGRGVRVNALAPGYVATEM 196

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 23/214 (10%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVL---GCRSMIRGQEALEKLKKEV-- 104
           +++    K  +ITG+ SGIG   A+ LAK  A +VL   G    IR       +  EV  
Sbjct: 19  YFQSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIR------TVTDEVAG 72
Query: 105 -QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
              G ++    +      I +    V  ++    +L+NNAGV    K +    E ++   
Sbjct: 73  LSSGTVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRII 132
Query: 164 GINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
            +N    F      I   +K          +G     N+    G V     + AY  +K 
Sbjct: 133 AVNLSSSFHTIRGAIPPXKK----------KGWGRIINIASAHGLVASPFKS-AYVAAKH 181
Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                   + L+ A+ GV V+ +CPG+  T L  
Sbjct: 182 GIXGLTKTVALEVAESGVTVNSICPGYVLTPLVE 215

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           KV IITGA  G+G   + E AKL A VV+      + GQ    K    V D  +    + 
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68
Query: 116 LASFDSI---KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           +A ++++       +  +K +  +HV+INNAG+      K  T++ Y++   ++  G F 
Sbjct: 69  VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFA 128
Query: 173 LTNLLIERIQK 183
           +T       QK
Sbjct: 129 VTKAAWPYFQK 139

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELN 115
           ++ ++TGA+ GIG E A   A+  ATV+L  R+  + ++    + +E  +  Q  +++L 
Sbjct: 11  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 70
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINHVGHFL 172
             + ++ +  A+ ++  YP++  +++NAG+     P+ E+    + ++    IN    F+
Sbjct: 71  TCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQ--NPQVWQDVMQINVNATFM 128
Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           LT  L+  + K         D G++ F + + G +G    G    AY  SK         
Sbjct: 129 LTQALLPLLLKS--------DAGSLVFTSSSVGRQGRANWG----AYAASKFATEGMMQV 176
Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV---IVGSSLMDRGT 288
           L  +Y  + + V+ + PG   T +   A      + +  P  +M +   ++G     +  
Sbjct: 177 LADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTG 235
Query: 289 IDFDNLNGEK 298
           + FD   G K
Sbjct: 236 MTFDAQPGRK 245

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-Q 105
           Y+P    +  ++ ++TGA+ GIG E A   A+  ATV+L  R+  + ++    + +E  +
Sbjct: 3   YQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 62
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVH 162
             Q  +++L   + ++ +  A+ +   YP++  +++NAG+     P+ E+    + ++  
Sbjct: 63  QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQ--NPQVWQDV 120
Query: 163 FGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPAYCNS 221
             +N    F+LT  L+  + K         D G++ F + + G +G    G    AY  S
Sbjct: 121 MQVNVNATFMLTQALLPLLLKS--------DAGSLVFTSSSVGRQGRANWG----AYAAS 168
Query: 222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV---I 278
           K         L  +Y  + + V+ + PG   T +   A      + +  P  +M +   +
Sbjct: 169 KFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWL 227
Query: 279 VGSSLMDRGTIDFDNLNGEK 298
           +G     +  + FD   G K
Sbjct: 228 MGDDSRRKTGMTFDAQPGRK 247

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG--QIVLME 113
           GK  +ITGA+ GIG E AK LA +   V +  RS     E  + LK E+++   +  +++
Sbjct: 29  GKNVLITGASKGIGAEIAKTLASMGLKVWINYRS---NAEVADALKNELEEKGYKAAVIK 85
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            + AS        + +++    +  L+NNAGV   +++KL  K   E     +HV    L
Sbjct: 86  FDAASESDFIEAIQTIVQSDGGLSYLVNNAGV---VRDKLAIKMKTE---DFHHVIDNNL 139
Query: 174 TNLLI-----------ERIQKVVIVGSSLMDRGTIDFDNLNGEKG 207
           T+  I            R   VV V S + +RG +   N +  KG
Sbjct: 140 TSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKG 184

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           K+ I+TGA SG+G   A  LA     V L  R +    +AL++   E+ D   + +  ++
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL----DALQETAAEIGD-DALCVPTDV 83
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI--KEKLTTKEGYEVHFGINHVGHFLLT 174
              DS++      ++++ ++ VL NNAG   P    E LT  +  +V    N  G FL T
Sbjct: 84  TDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQV-VDTNLTGPFLCT 142
Query: 175 NLLIERIQKVVIVGSSLMDRGTI 197
                  +     G  +++ G+I
Sbjct: 143 QEAFRVXKAQEPRGGRIINNGSI 165

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-Q 105
           Y+P    +  ++ ++TGA+ GIG E A   A+  ATV+L  R+  + ++    + +E  +
Sbjct: 24  YQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGR 83
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             Q  +++L   + ++ +  A+ ++  YP++  +++NAG+
Sbjct: 84  QPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL 123

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI--VL 111
           ++GK  I+TG++ G+G   A +L  + A +VL          +L+   +E +   I  V+
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP---ASTSLDATAEEFKAAGINVVV 59
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
            + ++ + + ++N  K  M  + +I +L+NNAG++        +++ ++     N    +
Sbjct: 60  AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAY 119
Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSKLMNYYFGA 230
           L T    + + K+      ++ + +    N+    G +   G +N  Y  SK     F  
Sbjct: 120 LCT----KAVSKI------MLKQKSGKIINITSIAGIIGNAGQAN--YAASKAGLIGFTK 167
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNL 255
            +  ++A KG+  + V PG   T++
Sbjct: 168 SIAKEFAAKGIYCNAVAPGIIKTDM 192

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQD--GQIV 110
           + G+  ++TGA  GIG   A+      A V L G R         +KLK+   D    + 
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE--------DKLKEIAADLGKDVF 76
Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK---EGYEVHFGINH 167
           +   NL+   SIK  A+   ++   I +L+NNAG++   ++ L  +   + ++    +N 
Sbjct: 77  VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT---RDGLFVRMQDQDWDDVLAVNL 133
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSKLMNY 226
                LT  LI           S+M R      N+    G V   G +N  YC +K    
Sbjct: 134 TAASTLTRELIH----------SMMRRRYGRIINITSIVGVVGNPGQTN--YCAAKAGLI 181
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-IFPIAMM 275
            F   L  + A + + V+ + PG+  + +    + K  + +M + P+  M
Sbjct: 182 GFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRM 231

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 51  YKP----MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-Q 105
           Y+P    +  ++ ++TGA+ GIG E A   A+  ATV+L  R+  + ++    + +E  +
Sbjct: 3   YQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGR 62
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             Q  +++L   + ++ +  A+ +   YP++  +++NAG+
Sbjct: 63  QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K   GKVC++TGA   IG  TA  LA+    + L    +   +EALEK +  V++  +  
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIAL----LDMNREALEKAEASVREKGVEA 58
Query: 112 ME--LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
                ++ S +++     +V++ + KI  L NNAG
Sbjct: 59  RSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG 93

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           ++GKV +ITGA+SGIG  TA+ LA   A V +  R +    E L  L  E+     ++ +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRV----EKLRALGDELTAAGAKVHV 60
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVH---FGIN 166
           +EL++A    +     + ++    + +L+NNAG+ +  P+++  TT     +     G+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLX 120
Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           +     L +LL  R +  V+  SS+  R  ++  N                Y  +K    
Sbjct: 121 YXTRAALPHLL--RSKGTVVQXSSIAGR--VNVRNA-------------AVYQATKFGVN 163
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
            F   L  +  ++GV V V+ PG   T L  H
Sbjct: 164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           K  ++TGA+ GIG   A +LA+    V +    S  + +  +E++K +  D     ++ N
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS--FAIQAN 68
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
           +A  D +K   K V+ Q+  + VL+NNAG++
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGIT 99

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV I+TGA+ GIG   A  LA    TVV+         E +   K E   G+ +  + ++
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG-KIEAAGGKALTAQADV 86
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGHFLLTN 175
           +   +++       + +  + VL+NNAG+  P+     T +  ++    +N  G F   N
Sbjct: 87  SDPAAVRRLFATAEEAFGGVDVLVNNAGIX-PLTTIAETGDAVFDRVIAVNLKGTF---N 142
Query: 176 LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLK 235
            L E  Q++  VG  +++  T     L+   G         A    +   +    EL   
Sbjct: 143 TLREAAQRLR-VGGRIINXSTSQVGLLHPSYGIYAA-----AKAGVEAXTHVLSKEL--- 193
Query: 236 YADKGVDVSV--VCPGWCYTNLF 256
              +G D++V  V PG   T+LF
Sbjct: 194 ---RGRDITVNAVAPGPTATDLF 213

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           A P  +    ++ ++TGA+ GIG   A+ L +    VV   R++   +E   + K     
Sbjct: 23  ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 82
Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G ++    +L++ + I +    +  Q+  + + INNAG++ P      +  G++  F +N
Sbjct: 83  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVN 142

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV IITG+++GIG  TA   A+  A V +  R      E LE+ ++++    +    +N 
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHA----ERLEETRQQILAAGVSEQNVNS 62
Query: 117 ASFDSIKNFAKN-----VMKQYPKIHVLINNAGVSVPIKEKLT----TKEGYEVHFGIN 166
              D   +  ++      + ++ K+ +L+NNAG ++P  +  T    + E Y+    +N
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL--GCRSMIRGQEALEKLKKEVQD--GQI 109
           ++GKV ++TGA+ GIG   AK LA   A V +  G R     +E  E+   E+Q   G  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR-----KEEAEETVYEIQSNGGSA 59
Query: 110 VLMELNLAS-------FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH 162
             +  NL S       + S+ N  +N      K  +LINNAG+      + TT++ ++  
Sbjct: 60  FSIGANLESLHGVEALYSSLDNELQNRTGS-TKFDILINNAGIGPGAFIEETTEQFFDRX 118
Query: 163 FGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYC 219
             +N    F +    + R++   +++ + S+       DF   +  KG +          
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAI---------- 168
Query: 220 NSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN 254
           N+          L  +   +G+ V+ + PG+  T+
Sbjct: 169 NTXTFT------LAKQLGARGITVNAILPGFVKTD 197

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV--Q 105
            P     E KV I+TG+  GIG   A+ LA+  A VV+   +     EA E + K++   
Sbjct: 1   GPGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN----AEAAEAVAKQIVAD 56
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            G  + + ++++  +S K  A   + ++  I  L+NNA +
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI 96

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           K  ++TGA+ GIG   A +LA+    V +    S  + +  +E++K +  D     ++ N
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS--FAIQAN 62
Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
           +A  D +K   K V+ Q+  + VL+NNAG++
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGIT 93

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVL--ME 113
           K+ +ITGA+SG G  TA+ LA     V    R ++ R    +E +    +D  + L  +E
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L++ S  S+      ++ +  +I VLI+NAG  V    +  T E +   + IN       
Sbjct: 66  LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDIN------- 118
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
             L  +R+ +  +        G + + + +   G        P Y             + 
Sbjct: 119 -VLSTQRVNRAALPHXRRQKHGLLIWISSSSSAG------GTPPYLAPYFAAKAAXDAIA 171
Query: 234 LKYADK----GVDVSVVCPGW--CYTNLFRHADI 261
           ++YA +    G++ S++ PG     TN F H+ +
Sbjct: 172 VQYARELSRWGIETSIIVPGAFTSGTNHFAHSGV 205

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GK  IITGA +GIG E A   A   A+VV+   S I   +A   +  E+Q   GQ   
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVV---SDINA-DAANHVVDEIQQLGGQAFA 64
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
              ++ S   +   A   + +  K+ +L+NNAG   P    +   + +   + +N    F
Sbjct: 65  CRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD-FRRAYELNVFSFF 123
Query: 172 LLTNLLIERIQK 183
            L+ L+   ++K
Sbjct: 124 HLSQLVAPEMEK 135

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EG   ++TG + GIGY   +ELA L A+V    R+     + L + +   +  ++    
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS--KGFKVEASV 64
Query: 114 LNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            +L+S    +     V   +  K+++L+NNAG+ +  + K  T E Y +   IN    + 
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 124
Query: 173 LTNL 176
           L+ L
Sbjct: 125 LSVL 128

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EG   ++TG + GIGY   +ELA L A+V    R+     + L + +   +  ++    
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS--KGFKVEASV 63
Query: 114 LNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            +L+S    +     V   +  K+++L+NNAG+ +  + K  T E Y +   IN    + 
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123
Query: 173 LTNL 176
           L+ L
Sbjct: 124 LSVL 127

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 87/226 (38%), Gaps = 41/226 (18%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK--KEVQDGQIVL 111
           M     ++TGAN GIG    ++L K K       R +I     +EK    K ++D ++ +
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDK-----NIRHIIATARDVEKATELKSIKDSRVHV 55
Query: 112 MELNLASFDSIKNFAKNV--MKQYPKIHVLINNAGVSVP-----------IKEKLTTKEG 158
           + L +    S+  F   V  +     + +LINNAGV +            I E+L     
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115
Query: 159 YEVHFGI-------NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK 211
             V           N         L + R   V+ + S L   G+I  DN +G   F   
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSR-AAVITISSGL---GSIT-DNTSGSAQF--- 167
Query: 212 GHSNP--AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
               P  AY  SK     FG  L +   D  V V   CPGW  TNL
Sbjct: 168 ----PVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K +EGK  +ITG+  GIG   A+   +  ATV +    + R ++A  ++           
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAA-----YA 58
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVG 169
           ++ ++   DSI       ++    + +L+NNA +    PI E   T+E YE  F IN  G
Sbjct: 59  VQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVE--ITRESYEKLFAINVAG 116

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +VCI+TG  SGIG  TA+  AK  A VV+   +    ++A  ++  E+   +   + +++
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADVN----EDAAVRVANEIGS-KAFGVRVDV 82
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
           +S    ++  +    ++ ++ VL+NNAG           +E ++    +N  G FL +  
Sbjct: 83  SSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKY 142
Query: 177 LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKY 236
           +I   ++    G S+++  +    +   ++          AY  SK             +
Sbjct: 143 VIPVXRRN--GGGSIINTTSYTATSAIADR---------TAYVASKGAISSLTRAXAXDH 191
Query: 237 ADKGVDVSVVCPGWC----YTNLFRHA 259
           A +G+ V+ V PG      +T +F  A
Sbjct: 192 AKEGIRVNAVAPGTIDSPYFTKIFAEA 218

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTT--KEGYEVHFGI 165
           +++ +  +LA   S +     V+ ++ +I  L+NNAG++  +++       E ++   G+
Sbjct: 80  RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGV 139
Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
           N  G    T  ++    K  +   +   R  I+  +++     V        YC SK   
Sbjct: 140 NLRGTVFFTQAVL----KAXLASDARASRSIINITSVSA----VXTSPERLDYCXSKAGL 191
Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTN 254
             F   L L+ A+ G+ V  V PG   ++
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPGIIRSD 220

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK  I+ G   G G  T + L +  A V+L  R+    +  + ++++E    ++  +  
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGP-RVHALRS 61
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++A  + I        +    I +L  NAGVS        ++  Y+  F +N  G F   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 175 NLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA-YCNSKLMNYYFGAE 231
             L   I++   ++  SS+ D G                GH   + Y  SK     F + 
Sbjct: 122 QRLTPLIREGGSIVFTSSVADEG----------------GHPGXSVYSASKAALVSFASV 165
Query: 232 LYLKYADKGVDVSVVCPGWCYT 253
           L  +   +G+ V+ V PG+  T
Sbjct: 166 LAAELLPRGIRVNSVSPGFIDT 187

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK  I+ G   G G  T + L +  A V+L  R+    +  + ++++E    ++  +  
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGP-RVHALRS 60
Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++A  + I        +    I +L  NAGVS        ++  Y+  F +N  G F   
Sbjct: 61  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 120
Query: 175 NLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA-YCNSKLMNYYFGAE 231
             L   I++   ++  SS+ D G                GH   + Y  SK     F + 
Sbjct: 121 QRLTPLIREGGSIVFTSSVADEG----------------GHPGXSVYSASKAALVSFASV 164
Query: 232 LYLKYADKGVDVSVVCPGWCYT 253
           L  +   +G+ V+ V PG+  T
Sbjct: 165 LAAELLPRGIRVNSVSPGFIDT 186

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 10/210 (4%)
Query: 49  PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ 108
           P++  + G++ ++TG + GIG   A+ L +  A V +  R      +   +L      G 
Sbjct: 23  PYFS-LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GD 78
Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
              +  +L+S    +  A+ + +   ++ +L+NNAG S     +     G+E    +N  
Sbjct: 79  CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138
Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
             F     L+  +++      S          N+    G    G    AY  SK   +  
Sbjct: 139 SVFSCIQQLLPLLRR------SASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQL 192
Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
              L  +   + ++V+V+ PG   + + RH
Sbjct: 193 SRMLAKELVGEHINVNVIAPGRFPSRMTRH 222

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           ++GKV +ITGA+SGIG  TA+ LA   A V +  R +    E L  L  E+     ++ +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRV----EKLRALGDELTAAGAKVHV 60
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVH---FGIN 166
           +EL++A    +     + ++    + +L+NNAG+ +  P+++  TT     +     G+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           ++    L +LL  R +  V+  SS+  R  ++  N                Y  +K    
Sbjct: 121 YMTRAALPHLL--RSKGTVVQMSSIAGR--VNVRN-------------AAVYQATKFGVN 163
Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
            F   L  +  ++GV V V+ PG   T L  H
Sbjct: 164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           P+  ++ ++TGA+ GIG   A ELA   A V +   S   G             G+   +
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-GAADEVVAAIAAAGGEAFAV 83
Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           + +++    ++     V++++ ++ VL+NNAG++         ++ ++    +N  G FL
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 173 LTN-----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            +      +L +R  ++            I+  ++ GE G    G +N  Y  +K     
Sbjct: 144 CSRAAAKIMLKQRSGRI------------INIASVVGEMG--NPGQAN--YSAAKAGVIG 187
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNL 255
               +  + A +G+ V+ V PG+  T++
Sbjct: 188 LTKTVAKELASRGITVNAVAPGFIATDM 215

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI 109
           F    +G+  ++TG  SGIG  TA E A+  A +VL        ++A+  L+ +  D   
Sbjct: 25  FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG 84
Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
           V+ ++     D +   A    +    + V+ +NAG+ V
Sbjct: 85  VVCDVR--HLDEMVRLADEAFRLLGGVDVVFSNAGIVV 120

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G   ++TG + GIGY   +ELA L A V    R+     E LE  +++  + +  + +
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 114 -LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            L+    D +     +V     K+++L+NNAGV +  + K  T++ Y +  G N    + 
Sbjct: 79  LLSRTERDKLMQTVAHVFDG--KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYH 136
Query: 173 LTNL 176
           L+ +
Sbjct: 137 LSQI 140

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 43  SKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK 102
           S+ K   +Y   E KV ++TGA  GIG E AK LAK  + V+  C S  R Q++ + +  
Sbjct: 31  SENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVI--CIS--RTQKSCDSVVD 86
Query: 103 EVQDG--QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE 160
           E++    +      +++  + I      ++ ++  + +L+NNAG+         T++   
Sbjct: 87  EIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI---------TRDNLF 137
Query: 161 VHFGINHVGHFLLTNL-----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN 215
           +    +     L TNL     + + I K +I  ++   R  I+  ++ G  G V  G +N
Sbjct: 138 LRMKNDEWEDVLRTNLNSLFYITQPISKRMI--NNRYGR-IINISSIVGLTGNV--GQAN 192
Query: 216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
             Y +SK     F   L  + A + + V+ + PG+  +++
Sbjct: 193 --YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 49  PFYKPME---GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ 105
           P YK  E   GK  +ITG +SGIG   +   AK  A + +       G     K   E +
Sbjct: 37  PNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKE 95
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEGYEVHFG 164
             + VL+  +L+     K+  +  ++Q   +++L+NN     P +  +  T E  E  F 
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 165 INHVGHFLLTNLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           IN   +F +T   +  +++  V+I  +S++           G +  +        Y  +K
Sbjct: 156 INIFSYFHVTKAALSHLKQGDVIINTASIVA--------YEGNETLID-------YSATK 200
Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
                F   L      KG+ V+ V PG  +T L 
Sbjct: 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI 234

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVL 111
           + GK  +ITGA++GIG + A   A+  A V +  R      +AL+ +  E+    G+ + 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH----SDALQVVADEIAGVGGKALP 85
Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK-EGYEVHFGINHVGH 170
           +  ++   D ++     +  +   I + + NAG+ V ++  L    E ++     N  G 
Sbjct: 86  IRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGI-VSVQAMLDMPLEEFQRIQDTNVTGV 144
Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           F LT     R      +G +++   ++    +N  +   Q  H    YC SK    +   
Sbjct: 145 F-LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ---QVSH----YCTSKAAVVHLTK 196
Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFR 257
            + ++ A   + V+ V PG+  T L  
Sbjct: 197 AMAVELAPHQIRVNSVSPGYIRTELVE 223

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +E KV IITGA  GIG ET++ LA+  A VVL        +  L      V  G +  + 
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLP----ETDLAGAAASVGRGAVHHV- 63
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT--TKEGYEVHFGINHVGHF 171
           ++L +  S++      +  + ++ ++ NNA  S P    +T  T + ++  F +N  G  
Sbjct: 64  VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123
Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           L+    I R          L+  G     N++          S  AY  +K         
Sbjct: 124 LMCKYAIPR----------LISAGGGAIVNISSATAHAAYDMST-AYACTKAAIETLTRY 172
Query: 232 LYLKYADKGVDVSVVCPGWCYT 253
           +  +Y   GV  + + PG   T
Sbjct: 173 VATQYGRHGVRCNAIAPGLVRT 194

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG 107
           SPF+  +   V I+TGA +GIG   A   AK  A+VV+       G EA+    ++   G
Sbjct: 6   SPFH--LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVV-TDLKSEGAEAVAAAIRQA-GG 61
Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           + + +E N+      +   K  + Q+ KI VL+NNAG   P    +   + +E  F +N 
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD-FEWAFKLNL 120
Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
              F L+ L    +QK    G ++++  ++  +N N             +Y +SK    +
Sbjct: 121 FSLFRLSQLAAPHMQKA--GGGAILNISSMAGENTNVRMA---------SYGSSKAAVNH 169
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
               +       G+ V+ + PG   T+          ++ M+
Sbjct: 170 LTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAML 211

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV +ITGA+ GIG    +        VV   RS+           K   D  I  +  ++
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSI-----------KPSADPDIHTVAGDI 77
Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +  ++     +  ++++ +I  L+NNAGV  + P  E   T+E Y+ + G+N  G F +T
Sbjct: 78  SKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVE--XTQEDYDHNLGVNVAGFFHIT 135
Query: 175 NLLIERIQK-----VVIVGSSLMDR 194
                   K     +V + +SL+D+
Sbjct: 136 QRAAAEXLKQGSGHIVSITTSLVDQ 160

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 51  YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL 100
           ++P  ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    +EAL+K+
Sbjct: 2   FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARS----KEALQKV 49

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 49  PFYKPME---GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ 105
           P YK  E   GK  +ITG +SGIG   +   AK  A + +       G     K   E +
Sbjct: 37  PNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKE 95
Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEGYEVHFG 164
             + VL+  +L+     K+  +  ++Q   +++L+NN     P +  +  T E  E  F 
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 165 INHVGHFLLTNLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
           IN   +F +T   +  +++  V+I  +S++           G +  +        Y  +K
Sbjct: 156 INIFSYFHVTKAALSHLKQGDVIINTASIVA--------YEGNETLID-------YSATK 200
Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
                F   L      KG+ V+ V PG  +T L 
Sbjct: 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI 234

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 51  YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL 100
           ++P  ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    +EAL+K+
Sbjct: 4   FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARS----KEALQKV 51

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 51  YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL 100
           ++P  ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    +EAL+K+
Sbjct: 25  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARS----KEALQKV 72

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K+ +ITG  +GIG   A+  A   A + +    ++   EA   ++   +  +++ ++
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLGR--RVLTVK 60
Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +++    ++ F K V+  + +  +L+NNAG+   I     T E ++  F IN    FL+
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLM 120
Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
               +  +++           G     NL     ++ K  +   Y ++K  N  F   L 
Sbjct: 121 AKAFVPGMKR----------NGWGRIINLTSTTYWL-KIEAYTHYISTKAANIGFTRALA 169
Query: 234 LKYADKGVDVSVVCPGWCYT 253
                 G+ V+ + P    T
Sbjct: 170 SDLGKDGITVNAIAPSLVRT 189

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 51  YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL 100
           ++P  ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    +EAL+K+
Sbjct: 4   FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARS----KEALQKV 51

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVV---LGC--RSMIRGQEALEKLK 101
           ASP     +G+V ++TGA  G+G   A   A+  A VV   LG   + + +G  A +K+ 
Sbjct: 2   ASPLR--FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 59
Query: 102 KEV--QDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGY 159
           +E+  + G+ V    N  S ++ +   K  +  + +I V++NNAG+         + E +
Sbjct: 60  EEIRRRGGKAV---ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 116
Query: 160 EVHFGINHVGHFLLTNLLIERIQK 183
           ++   ++  G F +T    +  +K
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHXKK 140

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIV 110
           KP+ GKV + TGA  GIG   A EL +  A+VV+   S  +  +E + +LKK     Q V
Sbjct: 17  KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK--LGAQGV 74
Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
            ++ +++    +       +  +  +  +++N+G+ V   E   T+E ++  F +N  G 
Sbjct: 75  AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQ 134
Query: 171 FLLTNLLIERIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA-YCNSKLMNYY 227
           F +    ++  ++   +I+ SS+                 V  G  N A Y  SK     
Sbjct: 135 FFVAQQGLKHCRRGGRIILTSSIA---------------AVMTGIPNHALYAGSKAAVEG 179
Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLF 256
           F     +    KGV V+ + PG   T++F
Sbjct: 180 FCRAFAVDCGAKGVTVNCIAPGGVKTDMF 208

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-78
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-15
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-67
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-08
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-47
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-32
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-31
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-29
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-28
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	9e-28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-27
1xhl_A	297	Short-chain dehydrogenase/reductase family member	6e-26
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-25
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-25
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-25
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-24
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-24
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-24
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-24
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	9e-24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-23
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-23
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-23
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	6e-23
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-22
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-22
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-22
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-21
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-21
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-21
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-21
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-21
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	5e-21
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-21
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	6e-21
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	6e-21
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-20
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-20
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-20
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-20
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-20
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-20
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-20
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-20
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-20
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-20
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-20
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-20
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-20
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-20
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-20
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-20
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-20
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	9e-20
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-19
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-19
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-19
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-19
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-19
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-19
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-19
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-19
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-19
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-19
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-19
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-19
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-19
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-19
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-19
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-19
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-19
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	6e-19
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	6e-19
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-19
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-19
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	7e-19
1xq1_A	266	Putative tropinone reducatse; structural genomics,	7e-19
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-19
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	8e-19
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	8e-19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-19
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	8e-19
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-18
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-18
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-18
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-18
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-18
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-18
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-18
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-18
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-18
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-18
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-18
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-18
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-18
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-18
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-18
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	6e-18
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	6e-18
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	7e-18
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-18
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-18
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	7e-18
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-18
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-18
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-17
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-17
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-17
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-17
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-17
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-17
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-17
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-17
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-17
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-17
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-17
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-17
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-17
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	5e-17
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-17
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-17
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	6e-17
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	7e-17
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-17
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	7e-17
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-17
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-16
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-16
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-16
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-16
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-16
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-16
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-16
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	7e-16
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	9e-16
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-16
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-15
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-15
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-15
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-15
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-15
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-15
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-15
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-15
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-14
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-14
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-14
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-14
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-14
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-14
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-14
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-13
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-13
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-13
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-13
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-12
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-12
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-11
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	9e-11
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-10
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-10
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-06
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-10
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  241 bits (617), Expect = 4e-78
 Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 19/219 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              +  +ITGANSG+G  TA+ELA+  ATV++  R   +G+ A   +      GQ+ + E
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-----GQVEVRE 68

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L+L    S++ FA           VLINNAG+         T +G+E   G NH+GHF L
Sbjct: 69  LDLQDLSSVRRFA----DGVSGADVLINNAGIMAVPYAL--TVDGFESQIGTNHLGHFAL 122

Query: 174 TNLLIERIQ-KVVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
           TNLL+ R+  +VV V S     G I+ ++LN   + +        AY  SKL N  F +E
Sbjct: 123 TNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRY----SPWLAYSQSKLANLLFTSE 178

Query: 232 LYLKYADKGVDVSVVC--PGWCYTNLFRHADIKFYQKVM 268
           L  +    G  +  +   PG+ +TNL   +  K    +M
Sbjct: 179 LQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALM 217

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 276 VVIVGSSLMDRGTIDFDNLN-GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVD 334
           VV V S     G I+ ++LN   + +        AY  SKL N  F +EL  +    G  
Sbjct: 134 VVTVSSMAHWPGRINLEDLNWRSRRY----SPWLAYSQSKLANLLFTSELQRRLTAAGSP 189

Query: 335 VCVVC--PGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQ 374
           +  +   PG+ +TNL   +  K    +M      +    A+ 
Sbjct: 190 LRALAAHPGYSHTNLQGASGRKLGDALM-SAATRVVATDADF 230

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  213 bits (545), Expect = 2e-67
 Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 35/240 (14%)

Query: 56  GKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             V ++TG N GIG    ++L +L    VVL  R + RGQ A+++L+ E         +L
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQL 61

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++    SI+     + K+Y  + VL+NNAG++  + +        EV    N  G   + 
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC 121

Query: 175 NLLIERIQK---VVIVGSSL----------MDRGTIDFDNLNGEKGFV------------ 209
             L+  I+    VV V S +            +     + +  E+               
Sbjct: 122 TELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 181

Query: 210 ---QKGHSNPAYCNSKLMN----YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
              ++G  + AY  +K+           +L  +     + ++  CPGW  T++      K
Sbjct: 182 VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATK 241

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 283 LMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN----YYFGAELYLKYADKGVDVCVV 338
           LM++   D      +K    +G  + AY  +K+           +L  +     + +   
Sbjct: 170 LMNKFVEDTKKGVHQK----EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC 225

Query: 339 CPGWCYTNLFRHADIK 354
           CPGW  T++      K
Sbjct: 226 CPGWVRTDMAGPKATK 241

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  163 bits (414), Expect = 1e-47
 Identities = 62/272 (22%), Positives = 98/272 (36%), Gaps = 66/272 (24%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
            + +  ++TG N GIG+E  K+L+     VVL CR + +G EA+EKLK    +  +V  +
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQ 68

Query: 114 LNLAS-FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE--------------------- 151
           L++     ++ + A  +   + K+ +L+NNAGV+    +                     
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 152 ---------KLTTKEGYEVHFGINHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTI 197
                       T E  E    IN+ G   +T +LI  +Q      +V V SS      +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 198 ----------DFDNLNGEK---------------GFVQKGHSN--PAYCNSKLMNYYFGA 230
                     D D L  E+                    G  +   AY  SK     +  
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
            L  K       V+ VCPG   T +       
Sbjct: 249 VLANKI--PKFQVNCVCPGLVKTEMNYGIGNY 278

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  120 bits (304), Expect = 7e-32
 Identities = 46/257 (17%), Positives = 89/257 (34%), Gaps = 36/257 (14%)

Query: 35  RYFKSRSWSKLKASPFY-KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG 93
           ++       +     F  + ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    
Sbjct: 6   QHQHQHQHQQPLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS---- 61

Query: 94  QEALEKLKKEVQD---GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--P 148
           +E L+K+     +        +   +      + F     K    + +LI N   +    
Sbjct: 62  KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN 121

Query: 149 IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNG 204
           +               +N + + +LT   +  +++    +V+V S            L G
Sbjct: 122 LFH--DDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSS------------LAG 167

Query: 205 EKGFVQKGHSNPAYCNSK--LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
           +  +     +  AY  SK  L  ++         +   V +++   G   T     A   
Sbjct: 168 KVAY--PMVA--AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG 223

Query: 263 FYQKVMIFP--IAMMVV 277
                       A+ ++
Sbjct: 224 IVHMQAAPKEECALEII 240

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  118 bits (299), Expect = 1e-31
 Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 35/223 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKAT--VVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           M     ++TGAN GIG    ++L K K    ++   R + +  E      K ++D ++ +
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-----KSIKDSRVHV 55

Query: 112 MELNLASFDSIKNFAKNVMKQY--PKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHV 168
           + L +    S+  F   V +      + +LINNAGV +         +        +N  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 169 GHFLLTNLLIERIQK---------------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGH 213
              LLT  L+  ++                 VI  SS +  G+I  DN +G   F     
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL--GSIT-DNTSGSAQF----- 167

Query: 214 SNPAYCNSKL-MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
              AY  SK  +N  FG  L +   D  V V   CPGW  TNL
Sbjct: 168 PVLAYRMSKAAIN-MFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  113 bits (284), Expect = 4e-29
 Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 46/231 (19%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           K + G++ +ITGA  GIG  TA E AKLK+ +VL   +    +  LE+   + +    ++
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN----KHGLEETAAKCKGLGAKV 82

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
               ++ ++ + I + AK V  +   + +L+NNAGV     +    T     E  F +N 
Sbjct: 83  HTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFA--TQDPQIEKTFEVNV 140

Query: 168 VGHFLLTNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSK 222
           + HF  T      + +     ++  +S                G V        AYC+SK
Sbjct: 141 LAHFWTTKAFLPAMTKNNHGHIVTVASAA--------------GHVSVPFLL--AYCSSK 184

Query: 223 LMNYYFGA---------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFY 264
                F A         EL       GV  + +CP +  T   ++      
Sbjct: 185 -----FAAVGFHKTLTDELA-ALQITGVKTTCLCPNFVNTGFIKNPSTSLG 229

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  111 bits (280), Expect = 1e-28
 Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 38/221 (17%)

Query: 57  KVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              +ITG N G+G    K L  L      +   CR+  + +E LE L K      I ++E
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAK--NHSNIHILE 78

Query: 114 LNLASFDSIKNFAKNV--MKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGH 170
           ++L +FD+      ++  + +   ++VL NNAG++           +        N V  
Sbjct: 79  IDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 138

Query: 171 FLLTNLLIERIQK---------------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN 215
            +L    +  ++K                +I  SS++  G+I   N +G           
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL--GSIQ-GNTDG---------GM 186

Query: 216 PAYCNSKL-MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            AY  SK  +N      L +    + +    + PGW  T++
Sbjct: 187 YAYRTSKSALN-AATKSLSVDLYPQRIMCVSLHPGWVKTDM 226

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  112 bits (282), Expect = 2e-28
 Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 41/230 (17%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K   G+   +TG  +G+G    ++L      V +         +AL  L+ E    +++ 
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
           ++L++AS +  K  A  V  ++  + +L NNAGV++  PI+E  ++ + ++   G+N  G
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEE--SSYDDWDWLLGVNLHG 121

Query: 170 HFLLTN----LLIERIQKVVIVG------SSLMDRGTIDFDNLNGEKGFV-QKGHSNPAY 218
                      ++ER++     G      +S+                F+         Y
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA--------------AFLAAGSPG--IY 165

Query: 219 CNSKLMNYYFG----AE-LYLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
             +K     F     +E L+       + VSV+CPG   + ++   DI+ 
Sbjct: 166 NTTK-----FAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP 210

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  110 bits (276), Expect = 9e-28
 Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 40/223 (17%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
              +G+  ++TG  SGIG  TA E A+  A +VL        ++A+  L+   Q      
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG--QGFDAHG 84

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
           +  ++   D +   A    +    + V+ +NAG+ V  P+ +     + +     I+  G
Sbjct: 85  VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQ--MNHDDWRWVIDIDLWG 142

Query: 170 HFLLTNLLIERIQK------VVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSK 222
                   + R+ +      +    S                 G V   G     Y  +K
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFA---------------GLVPNAGLG--TYGVAK 185

Query: 223 LMNYYFG----AE-LYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
                +G    AE L  +    G+ VSV+CP    T L  +++
Sbjct: 186 -----YGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  106 bits (266), Expect = 7e-27
 Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 47/222 (21%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           M     I+TGA SG+G      L +    V +  R      + L++ +  +    ++ + 
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR----YQRLQQQELLL-GNAVIGIV 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            +LA  + +       ++      ++++ AG     P+     T E        N V   
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGV--YTAEQIRRVMESNLVSTI 113

Query: 172 LLTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L+      L+ ER   +  V SS              + G      S   YC SK     
Sbjct: 114 LVAQQTVRLIGERGGVLANVLSSA------------AQVGK--ANES--LYCASK----- 152

Query: 228 FG---------AELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
           +G         AEL     D  + +  + P    +  + + D
Sbjct: 153 WGMRGFLESLRAEL----KDSPLRLVNLYPSGIRSEFWDNTD 190

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  105 bits (263), Expect = 6e-26
 Identities = 52/226 (23%), Positives = 83/226 (36%), Gaps = 37/226 (16%)

Query: 48  SPFYKPM---EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE- 103
            P    M    GK  IITG+++GIG   A   AK  A V +  R+  R +E  +++ K  
Sbjct: 15  VPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG 74

Query: 104 VQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT--TKEGYEV 161
           V   +I  +  ++       +     + ++ KI +L+NNAG ++      T    E Y+ 
Sbjct: 75  VPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK 134

Query: 162 HFGINHVGHFLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
            F +N      +T    E + K    +V V S            + G +         P 
Sbjct: 135 TFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSI-----------VAGPQAHSG----YPY 179

Query: 218 YCNSKLMNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
           Y  +K       A         +     GV V+ V PG   T    
Sbjct: 180 YACAK------AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG 219

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  103 bits (259), Expect = 1e-25
 Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 45/228 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMIRGQEALEKLKKEVQ----D 106
           +   VC++TGA+ G G   A +LA+L    + +++  RS    +  L +LK+E+     D
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS----ESMLRQLKEELGAQQPD 59

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYP----KIHVLINNAGVSVPIKE---KLTTKEGY 159
            ++VL   +L +   ++     V +       +  +LINNA     + +    +      
Sbjct: 60  LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119

Query: 160 EVHFGINHVGHFLLTNLLIERIQK-------VVIVGSSLMDRGTIDFDNLNGEKGFVQKG 212
             ++ +N      LT+  +   Q        VV + S            L   + +  KG
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS------------LCALQPY--KG 165

Query: 213 HSNPAYCNSK-LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                YC  K   +  +     L   +  V V    PG    ++ + A
Sbjct: 166 WG--LYCAGKAARDMLYQV---LAAEEPSVRVLSYAPGPLDNDMQQLA 208

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  103 bits (258), Expect = 1e-25
 Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 43/241 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-----GQ 108
            +  + IITGA+ GIG   A  LA     VVL  RS    ++ LEK+  E+        +
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS----KQNLEKVHDEIMRSNKHVQE 60

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
            +++ L++          K++ ++Y  + +L+N A +           + +     IN +
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMF-MDGSLSEPVDNFRKIMEINVI 119

Query: 169 GHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
             + +   + E ++      +  V S               + GF         Y ++K 
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVAS------------RAAKYGF--ADGGI--YGSTK- 162

Query: 224 MNYYFGAE-----LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMMV 276
               F        LY + A  G+ V+ +CPGW  T++ + A   F  + MI P  +   +
Sbjct: 163 ----FALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTI 218

Query: 277 V 277
            
Sbjct: 219 R 219

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  101 bits (253), Expect = 9e-25
 Identities = 43/220 (19%), Positives = 80/220 (36%), Gaps = 36/220 (16%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME 113
             KV IITG+++GIG  TA   A+  A V +  R   R +E  +++    V +  +  + 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT----TKEGYEVHFGINHVG 169
            ++ +           + ++ K+ +L+NNAG ++P  +  T    + E Y+    +N   
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 170 HFLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
              LT   +  +      +V + S             +G           P Y  +K   
Sbjct: 125 VIALTKKAVPHLSSTKGEIVNISSI-----------ASGLHATP----DFPYYSIAK--- 166

Query: 226 YYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
               A         +     G+ V+ + PG   T      
Sbjct: 167 ---AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 203

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  100 bits (252), Expect = 1e-24
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 34/217 (15%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME 113
             K  IITG+++GIG  TA   A+  A V +  RS  R +E  + + K  V + Q+  + 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF----GINHVG 169
            ++ + D       + +KQ+ KI VL+NNAG ++P     T  +     +     +N   
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124

Query: 170 HFLLTNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
              +T      L+    ++V V S            + G +           Y  +K   
Sbjct: 125 VIEMTKKVKPHLVASKGEIVNVSSI-----------VAGPQAQP--DFLY--YAIAK--- 166

Query: 226 YYFGAELYLK-----YADKGVDVSVVCPGWCYTNLFR 257
                + Y +      A  G+ V+ V PG   T    
Sbjct: 167 --AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 201

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 99.5 bits (249), Expect = 2e-24
 Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 50/231 (21%)

Query: 51  YKPM----EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           Y+P       ++ ++TGA+ GIG E A   A+  ATV+L  R+    +E L ++   + +
Sbjct: 3   YQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN----EEKLRQVASHINE 58

Query: 107 -----GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEG 158
                 Q  +++L   + ++ +  A+ +   YP++  +++NAG+     P+ E     + 
Sbjct: 59  ETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSE--QNPQV 116

Query: 159 YEVHFGINHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGH 213
           ++    +N    F+LT  L+  + K     +V   SS+            G +G    G 
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSV------------GRQGRANWG- 163

Query: 214 SNPAYCNSKLMNYYFGAELYLK-----YADKGVDVSVVCPGWCYTNLFRHA 259
              AY  SK     F  E  ++     Y  + + V+ + PG   T +   A
Sbjct: 164 ---AYAASK-----FATEGMMQVLADEYQ-QRLRVNCINPGGTRTAMRASA 205

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 99.6 bits (249), Expect = 3e-24
 Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 42/218 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV ++TGA  GIG   A+ L    A V L   ++  G +    L ++ +  + + ++
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            ++A    +++  + V+  + ++ +L+NNAGV          ++ +E    IN V     
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQINLVSVISG 116

Query: 174 TNLLIERIQK------VVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           T L ++ + K       +I+  SS           L G           P YC SK    
Sbjct: 117 TYLGLDYMSKQNGGEGGIIINMSS-----------LAGLMPVA----QQPVYCASK---- 157

Query: 227 YFG-------AELYLKYADKGVDVSVVCPGWCYTNLFR 257
             G       A L     + GV ++ +CPG+  T +  
Sbjct: 158 -HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 194

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 99.3 bits (248), Expect = 3e-24
 Identities = 47/221 (21%), Positives = 78/221 (35%), Gaps = 32/221 (14%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV ++TG + GIG      L  L    V+   +  R +  L+KLK++    +   +  +
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVA--RSEAPLKKLKEKY-GDRFFYVVGD 58

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTK-EGYEVHFGINHVGHFLLT 174
           +     +K      +K + KI  L+ NAGV  P++         ++  + IN      L 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 175 NL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
            +    L +    VV V S                  F   G    AY +SK        
Sbjct: 119 GIALPELKKTNGNVVFVSSD------------ACNMYFSSWG----AYGSSK-----AAL 157

Query: 231 ELY---LKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
             +   L   ++ V    V PG   T++  +         M
Sbjct: 158 NHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSM 198

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 98.0 bits (245), Expect = 8e-24
 Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 36/216 (16%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK  I+ G   G+G  T + L +  A V+L  R+    +  + ++++E    ++  +  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN----ESNIARIREEF-GPRVHALRS 61

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           ++A  + I        +    I +L  NAGVS   P  +   ++  Y+  F +N  G F 
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQ--VSEASYDRQFAVNTKGAFF 119

Query: 173 LTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK----LMN 225
               L   I++   +V   S            +  E G    G S   Y  SK       
Sbjct: 120 TVQRLTPLIREGGSIVFTSS------------VADEGGHP--GMSV--YSASKAALVSFA 163

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
               AEL      +G+ V+ V PG+  T     A I
Sbjct: 164 SVLAAEL----LPRGIRVNSVSPGFIDTPTKGVAGI 195

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 98.4 bits (246), Expect = 8e-24
 Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 36/214 (16%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             K+ +ITGA SGIG   AK      A V +  R     ++ L+    E+  G  V ++ 
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR----KDVLDAAIAEI-GGGAVGIQA 82

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           + A+   +    + V  +  +I VL  NAG     P+ E   T+E Y+  F  N  G   
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGE--VTEEQYDDTFDRNVKGVLF 140

Query: 173 LTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK----LMN 225
                +  + +   VV+ GS+             G  G      S   Y  SK       
Sbjct: 141 TVQKALPLLARGSSVVLTGST------------AGSTGT--PAFS--VYAASKAALRSFA 184

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             +  +L     D+G+ ++ + PG   T      
Sbjct: 185 RNWILDL----KDRGIRINTLSPGPTETTGLVEL 214

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 97.6 bits (244), Expect = 9e-24
 Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 46/224 (20%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-----GQI 109
           +G+V ++TGA  GIG   A+  A   A+VVL  R+    + +L ++  +++        I
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT----EASLAEVSDQIKSAGQPQPLI 68

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGIN 166
           + + L  A+    +  A  V  ++ ++  L++NA +     P+++     E +     +N
Sbjct: 69  IALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQ--LPDEDFMQVMHVN 126

Query: 167 HVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
               F+LT  L+  +++     +    SS+            G KG    G    AY  S
Sbjct: 127 VNATFMLTRALLPLLKRSEDASIAFTSSSV------------GRKGRANWG----AYGVS 170

Query: 222 KLMNYYFGAELYLK------YADKGVDVSVVCPGWCYTNLFRHA 259
           K     F  E  ++           V  + + PG   T +   A
Sbjct: 171 K-----FATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA 209

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 50/237 (21%), Positives = 94/237 (39%), Gaps = 41/237 (17%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIVL 111
           E KV +ITGA+ GIG   A+ LA+    + LG RS     + LEK+  E+      ++  
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFY 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
             L+++  +S++ F+K V++++  + V++ NAG+     ++E   ++E +     +N +G
Sbjct: 57  HHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEE--LSEEEFHEMIEVNLLG 114

Query: 170 HFLLTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            +         L       ++  S +            G             Y ++K   
Sbjct: 115 VWRTLKAFLDSLKRTGGLALVTTSDV---SARLIPYGGG-------------YVSTK--- 155

Query: 226 YYFGAE---LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMMVV 277
             + A       +  +  V    + PG   T        K  +K  + P  IA  V 
Sbjct: 156 --WAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVR 210

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 97.0 bits (242), Expect = 2e-23
 Identities = 43/220 (19%), Positives = 64/220 (29%), Gaps = 42/220 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  K  I   A  GIG +T++EL K      +     +    AL +LK       I    
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR-VENPTALAELKAINPKVNITFHT 61

Query: 114 LNL-ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            ++       K   K +  Q   + +LIN AG+              E    IN  G   
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI--------LDDHQIERTIAINFTGLVN 113

Query: 173 LTNLLIERIQK-------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            T  +++   K       ++    S+            G     Q     P Y  SK   
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSVT-----------GFNAIHQV----PVYSASK--- 155

Query: 226 YYFGA-----ELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
                      L       GV    + PG   T L    +
Sbjct: 156 --AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN 193

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 96.9 bits (242), Expect = 3e-23
 Identities = 52/248 (20%), Positives = 85/248 (34%), Gaps = 43/248 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           +  KV +I+G    +G   A+  A+  A +VL  R+     E LE + K+V D   + + 
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAART----VERLEDVAKQVTDTGRRALS 64

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINHV 168
           +  ++     + +     MK Y ++ V+INNA       P     TT E       +   
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFAN--TTFEHMRDAIELTVF 122

Query: 169 GHFLLTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           G   L       L E    VV V S            +       + G    AY  +K  
Sbjct: 123 GALRLIQGFTPALEESKGAVVNVNS------------MVVRHSQAKYG----AYKMAK-- 164

Query: 225 NYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVI 278
                A       L  +  +KG+ V+ V PG+ +    +        K       +    
Sbjct: 165 ----SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA 220

Query: 279 VGSSLMDR 286
              S + R
Sbjct: 221 AAGSDLKR 228

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 96.1 bits (240), Expect = 6e-23
 Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 38/220 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              +V +ITG  SG+G  TA  LA   A + L   S    + +   + +   D +++   
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGH 170
            +++    ++ +     +++ +I    NNAG+     P +    T   ++    IN  G 
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTES--FTAAEFDKVVSINLRGV 128

Query: 171 FLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
           FL    +++ +++     VV   S            + G +G      +   Y  +K   
Sbjct: 129 FLGLEKVLKIMREQGSGMVVNTAS------------VGGIRGIG----NQSGYAAAK--- 169

Query: 226 YYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                         ++Y   G+ ++ + PG  +T +  ++
Sbjct: 170 ---HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS 206

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 38  KSRSWSKLKASPFYKPM---EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ 94
                S        K M    G+V ++TGA+ GIG   A++L  L A VVL  R      
Sbjct: 8   HHHHHSSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD----V 63

Query: 95  EALEKLKKEVQD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           E L  +++E+    G+      +L+  D+I  FA  V+  + +  VL+NNAGV
Sbjct: 64  EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 93.7 bits (234), Expect = 3e-22
 Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 34/221 (15%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
           Y+ ++ KV I+TGA SGIG   AK+ A   + VV       R  + +++L+      +++
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVL 59

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVG 169
            ++ +++    ++ F +   + Y +I VL NNAG+   +      + E +E    +N   
Sbjct: 60  GVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119

Query: 170 HFLLTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            F  +  +I  + K    VIV  +S+            G +G      +   Y  +K   
Sbjct: 120 AFYSSRAVIPIMLKQGKGVIVNTASIA-----------GIRGG----FAGAPYTVAK--- 161

Query: 226 YYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHAD 260
                       +   Y D+G+    V PG   TN+   + 
Sbjct: 162 ---HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS 199

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 93.9 bits (234), Expect = 4e-22
 Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 35/216 (16%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + M  K  +ITG+ SGIG   A+ LAK  A +VL           +      +  G ++ 
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVG 169
              ++     I +    V  ++    +L+NNAGV     I++     E ++    +N   
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED--FPVEQWDRIIAVNLSS 138

Query: 170 HFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            F      I  ++K     ++ + S             +G      K     AY  +K  
Sbjct: 139 SFHTIRGAIPPMKKKGWGRIINIAS------------AHGLVASPFK----SAYVAAK-- 180

Query: 225 NYYFGAE-----LYLKYADKGVDVSVVCPGWCYTNL 255
               G       + L+ A+ GV V+ +CPG+  T L
Sbjct: 181 ---HGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 42/241 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
               V +ITGA SGIG  TA  LA    TV    R+    +  +E++  E+    GQ + 
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRT----RTEVEEVADEIVGAGGQAIA 81

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHV 168
           +E +++    ++N  ++++ ++  + +++ NAG++    PI +       ++    +N  
Sbjct: 82  LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDD--LKPFEWDETIAVNLR 139

Query: 169 GHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
           G FL  +L +  +++     +V+V S            +NG + F   G +   Y  +K 
Sbjct: 140 GTFLTLHLTVPYLKQRGGGAIVVVSS------------INGTRTFTTPGATA--YTATK- 184

Query: 224 MNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV 277
                 A      +L L+     + V+ VCPG   TN+  +  ++  ++  I        
Sbjct: 185 -----AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQ 239

Query: 278 I 278
           +
Sbjct: 240 V 240

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 37/212 (17%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQ 108
           YK +EGKV +ITG+++G+G   A   A  KA VV+  RS    ++    + +E++   G+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGE 58

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGIN 166
            + ++ ++     + N  ++ +K++ K+ V+INNAG+   V   E   +   +      N
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHE--MSLSDWNKVIDTN 116

Query: 167 HVGHFLLT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G FL +       +E   K  ++  SS           ++ +  +      +  Y  S
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSS-----------VHEKIPWP--LFVH--YAAS 161

Query: 222 K----LMNYYFGAELYLKYADKGVDVSVVCPG 249
           K    LM      E    YA KG+ V+ + PG
Sbjct: 162 KGGMKLMTETLALE----YAPKGIRVNNIGPG 189

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 91.8 bits (229), Expect = 2e-21
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           +  KV +ITGA+ GIG   A+EL    A ++LG R   R Q  +E +  E++D  G  + 
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGAR---R-QARIEAIATEIRDAGGTALA 57

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             L++    S+  FA+  +  + +I VL+NNAGV
Sbjct: 58  QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV 91

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 91.8 bits (229), Expect = 2e-21
 Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 40/215 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +G   ++TG + GIGY   +ELA L A V    R+     E LE  +++     +     
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 115 NLASFDSIKNFAKNVMKQYP-KIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +L S        + V   +  K+++L+NNAGV +    K+   T++ Y +  G N    +
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKD--FTEKDYNIIMGTNFEAAY 135

Query: 172 LLTNL----LIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            L+ +    L       V+ + S            + G         S   Y  SK    
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSS------------IAGFSALP----SVSLYSASK---- 175

Query: 227 YFGAELYL------KYADKGVDVSVVCPGWCYTNL 255
             GA   +      ++A   + V+ V PG   T L
Sbjct: 176 --GAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 91.1 bits (227), Expect = 2e-21
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
             ++GKV +ITGA+SGIG  TA+ LA   A V +  R   R  E L  L  E+     ++
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAAR---R-VEKLRALGDELTAAGAKV 58

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            ++EL++A    +     + ++    + +L+NNAG+
Sbjct: 59  HVLELDVADRQGVDAAVASTVEALGGLDILVNNAGI 94

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 90.8 bits (226), Expect = 3e-21
 Identities = 45/216 (20%), Positives = 73/216 (33%), Gaps = 35/216 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
                  + GA   IG E AK+ A    TV  G R+     E L  L  E++   G+IV 
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN----GEKLAPLVAEIEAAGGRIVA 60

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
             L+  + D +  F       +  + V I N G +V  PI E  TT   +   + +    
Sbjct: 61  RSLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILE--TTDRVFRKVWEMACWA 117

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDF-DNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
            F+        +            +G I F       +G         A+ ++K     F
Sbjct: 118 GFVSGRESARLMLA--------HGQGKIFFTGATASLRGGSGFA----AFASAK-----F 160

Query: 229 GAE-----LYLKYADKGVDVS-VVCPGWCYTNLFRH 258
           G       +  +   K + V+ ++      T   R 
Sbjct: 161 GLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE 196

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 90.4 bits (225), Expect = 5e-21
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 35/214 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TG+ SGIG   A  LA   A +VL         E +          +++   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
            +L+  ++++    N ++Q  +I +L+NNAG+  +  I++     E ++    +N    F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED--FPTEKWDAILALNLSAVF 119

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             T   +  ++K     ++ + S             +G      K     AY  +K    
Sbjct: 120 HGTAAALPHMKKQGFGRIINIAS------------AHGLVASANK----SAYVAAK---- 159

Query: 227 YFGAE-----LYLKYADKGVDVSVVCPGWCYTNL 255
             G         L+ A +G+  + +CPGW  T L
Sbjct: 160 -HGVVGFTKVTALETAGQGITANAICPGWVRTPL 192

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 90.7 bits (226), Expect = 5e-21
 Identities = 46/234 (19%), Positives = 86/234 (36%), Gaps = 45/234 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G++ ++TG + GIG   A+ L +  A V +  R      +   +L      G    + 
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIP 83

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYE---------VH 162
            +L+S    +  A+ + +   ++ +L+NNAG S    ++       G+E         V 
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES--YPVSGWEKVMQLNVTSVF 141

Query: 163 FGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
             I  +   L  +   E   +V+ +GS                 G    G    AY  SK
Sbjct: 142 SCIQQLLPLLRRSASAENPARVINIGSVA---------------GISAMGEQAYAYGPSK 186

Query: 223 LMNYYFGAELYL------KYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQKVM 268
                  A   L      +   + ++V+V+ PG   + + RH   D +  +   
Sbjct: 187 ------AALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADS 234

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 90.7 bits (226), Expect = 5e-21
 Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 38/218 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +E KV IITGA  GIG ET++ LA+  A VVL          A   +         V   
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHV 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVGHF 171
           ++L +  S++      +  + ++ ++ NNA  S P    +   T + ++  F +N  G  
Sbjct: 64  VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123

Query: 172 LLTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L+    I R+       IV  SS                 +      + AY  +K     
Sbjct: 124 LMCKYAIPRLISAGGGAIVNISS-----------ATAHAAYD----MSTAYACTK----- 163

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             A       +  +Y   GV  + + PG   T      
Sbjct: 164 -AAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG 200

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 90.4 bits (225), Expect = 6e-21
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVL 111
                   ITGA SG G   A+  A+   ++VL  R   R +E L+ L  E+    +++ 
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGR---R-EERLQALAGELSAKTRVLP 73

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI 149
           + L++    ++     N+ +++  +  LINNAG+++  
Sbjct: 74  LTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGT 111

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 90.7 bits (226), Expect = 6e-21
 Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 37/217 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGK+ I+TGA+SGIG   A   A+  A VV+  R+     E  +++      G+   + 
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALA 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGH 170
            ++      +   +  ++++  +    NNAG       I     + EG+      N    
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISS--LSVEGWRETLDTNLTSA 121

Query: 171 FLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           FL     +  I       +   SS +              G          Y  SK    
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFV--------------GHTAGFAGVAPYAASK---- 163

Query: 227 YFGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
                      L ++   +G+ V+ + PG   T    
Sbjct: 164 --AGLIGLVQALAVELGARGIRVNALLPGGTDTPANF 198

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 90.3 bits (225), Expect = 6e-21
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 39/216 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV ++TG   GIG    +      A VV+  +     +     L++E+     V +  
Sbjct: 8   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQEL--PGAVFILC 61

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLL 173
           ++   D +K      ++++ ++  ++NNAG   P +    T+ +G+     +N +G + L
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 174 TNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           T L +  ++K    V+ + S            L G  G  Q       Y  +K      G
Sbjct: 122 TKLALPYLRKSQGNVINISS------------LVGAIGQAQ----AVPYVATK------G 159

Query: 230 A------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
           A       L L  +  GV V+ + PG  +T L+   
Sbjct: 160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 90.3 bits (225), Expect = 6e-21
 Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 34/215 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
             GKVC++TGA   IG  TA  LA+    + L   +    ++A   ++++    +     
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYV 62

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFL 172
            ++ S +++     +V++ + KI  L NNAG             + +     IN  G F 
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 122

Query: 173 LTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           +   +  ++       ++  +S+            G KG      +  AY  SK      
Sbjct: 123 VLKAVSRQMITQNYGRIVNTASMA-----------GVKGPP----NMAAYGTSK------ 161

Query: 229 GA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
           GA         L  A   + V+ + PG+       
Sbjct: 162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW 196

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 89.5 bits (223), Expect = 1e-20
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 38/216 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GK  IITGA +GIG E A   A   A+VV+   +     +A   +  E+Q   GQ   
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFA 64

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
              ++ S   +   A   + +  K+ +L+NNAG   P    +     +   + +N    F
Sbjct: 65  CRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM-PMADFRRAYELNVFSFF 123

Query: 172 LLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            L+ L+   ++K    V++  +S+             E   +    ++  Y +SK     
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMA-----------AENKNI--NMTS--YASSK----- 163

Query: 228 FGAELYL------KYADKGVDVSVVCPGWCYTNLFR 257
             A  +L         +K + V+ + PG   T+  +
Sbjct: 164 -AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 89.5 bits (223), Expect = 1e-20
 Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 34/217 (15%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQ 108
           Y  ++ KV +I G    +G  TAK  A     +VL          A  KLK E++D   +
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTA-NKLKDELEDQGAK 64

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGIN 166
           + L + +L++ + +        K++ K+ + IN  G  +  PI E  T++  ++    IN
Sbjct: 65  VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVE--TSEAEFDAMDTIN 122

Query: 167 HVGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK- 222
           +   +       + +     ++ + +SL+   T                +S   Y  +K 
Sbjct: 123 NKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG--------------FYST--YAGNKA 166

Query: 223 ---LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
                      EL      + + V+ + PG   T+ F
Sbjct: 167 PVEHYTRAASKEL----MKQQISVNAIAPGPMDTSFF 199

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 89.9 bits (224), Expect = 1e-20
 Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 42/217 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  +VCI+TG  SGIG  TA+  AK  A VV+   +         ++       +   + 
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVR 79

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           ++++S    ++  +    ++ ++ VL+NNAG      +      +E ++    +N  G F
Sbjct: 80  VDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVT--IPEETWDRIMSVNVKGIF 137

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           L +  +I  +++     ++   S                           AY  SK    
Sbjct: 138 LCSKYVIPVMRRNGGGSIINTTS------------YTATSAI----ADRTAYVASK---- 177

Query: 227 YFGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
             GA       + + +A +G+ V+ V PG   +  F 
Sbjct: 178 --GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT 212

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 27/209 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIV 110
           ++G+V I+TG  +GIG    KEL +L + VV+  R + R + A ++L+  +      +++
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
            ++ N+ + + + N  K+ +  + KI+ L+NN G       +  + +G+      N  G 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 135

Query: 171 FLLTNLLIERIQKVVIVGSSLMDR--GTIDFDNLN----GEKGFVQKGHSNPAYCNSKLM 224
           F +             V SS M    G+I    +N     + GF    H       ++  
Sbjct: 136 FYMCKA----------VYSSWMKEHGGSI----VNIIVPTKAGFPLAVH----SGAARAG 177

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYT 253
            Y     L L++A  G+ ++ V PG  Y+
Sbjct: 178 VYNLTKSLALEWACSGIRINCVAPGVIYS 206

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 89.1 bits (222), Expect = 1e-20
 Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 40/215 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EG   ++TG + GIGY   +ELA L A+V    R+     + L + + +    ++     
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 115 NLASFDSIKNFAKNVMKQYP-KIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +L+S    +     V   +  K+++L+NNAG+ +    K+   T E Y +   IN    +
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD--YTVEDYSLIMSINFEAAY 123

Query: 172 LLTNL----LIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
            L+ L    L    +  VV + S            ++G             Y  +K    
Sbjct: 124 HLSVLAHPFLKASERGNVVFISS------------VSGALA----VPYEAVYGATK---- 163

Query: 227 YFGAELYL------KYADKGVDVSVVCPGWCYTNL 255
             GA   L      ++A   + V+ V PG   T+L
Sbjct: 164 --GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 89.1 bits (222), Expect = 1e-20
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 24/204 (11%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           KP+E KV ++T +  GIG   A+ LA+  A VV+  R        +  L+ E     +  
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTG 67

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGH 170
              ++   +  +      +  +  + +L++NA V+      +   E  ++    +N    
Sbjct: 68  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 127

Query: 171 FLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
            L+T  ++  ++K     V+IV S            +     F   G     Y  SK   
Sbjct: 128 VLMTKAVVPEMEKRGGGSVLIVSS------------VGAYHPFPNLG----PYNVSKTAL 171

Query: 226 YYFGAELYLKYADKGVDVSVVCPG 249
                 L ++ A + + V+ + PG
Sbjct: 172 LGLTKNLAVELAPRNIRVNCLAPG 195

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 35/217 (16%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           KP+ GKV + TGA  GIG   A EL +  A+VV+   S     +A E++  E++    Q 
Sbjct: 17  KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQG 73

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
           V ++ +++    +       +  +  +  +++N+G+ V     E   T+E ++  F +N 
Sbjct: 74  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELE--VTQELFDKVFNLNT 131

Query: 168 VGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK-- 222
            G F +    ++  ++   +++  S                 G     H+   Y  SK  
Sbjct: 132 RGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------TGIP--NHAL--YAGSKAA 176

Query: 223 --LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                  F  +       KGV V+ + PG   T++F 
Sbjct: 177 VEGFCRAFAVDC----GAKGVTVNCIAPGGVKTDMFD 209

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 89.5 bits (223), Expect = 2e-20
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 35/216 (16%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG-QIVLME 113
           + +  ++TG  SGIG   A  L    A+V++  R+  +   A+++L+    +G  I    
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFL 172
            ++ + D        V   + ++H +++ AG S  I        E +     +N  G   
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 173 LTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           +       + +      V + S            +         G    AY  +K     
Sbjct: 130 VLKHAAREMVRGGGGSFVGISS------------IAASNTHRWFG----AYGVTK----- 168

Query: 228 FGAELYL------KYADKGVDVSVVCPGWCYTNLFR 257
             A  +L      +     V V+ + PG   T+L  
Sbjct: 169 -SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVA 203

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 47/215 (21%), Positives = 79/215 (36%), Gaps = 35/215 (16%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
            +V I+TGA+SG G   A         V     S    +E            +++ +  +
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA-YADKVLRVRAD 60

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINHVGHFL 172
           +A    +       M+Q+  I VL+NNAG++   +  +   T  E ++    +N  G FL
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 173 LTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
               ++  +      VIV  +S           +     F        AY  SK      
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIAS-----------VASLVAFP----GRSAYTTSK------ 159

Query: 229 GA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
           GA       + + YA  G+  + VCPG   T + +
Sbjct: 160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 6/94 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           M+ KV IITG +SG+G   A   AK  A VV+  R+    +E LE+ K E++   GQI+ 
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT----KEKLEEAKLEIEQFPGQILT 59

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +++++ + D I+   + + +++ +I +LINNA  
Sbjct: 60  VQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAG 93

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 30/212 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           + GK  +ITGA++GIG + A   A+  A V +  R      +AL+ +  E+    G+ + 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH----SDALQVVADEIAGVGGKALP 85

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           +  ++   D ++     +  +   I + + NAG+           E ++     N  G F
Sbjct: 86  IRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVF 145

Query: 172 LLT----NLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--L 223
           L        ++++     ++   S     G I           +        YC SK  +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMS---GHI-----------INIPQQVSHYCTSKAAV 191

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
           ++      + ++ A   + V+ V PG+  T L
Sbjct: 192 VH--LTKAMAVELAPHQIRVNSVSPGYIRTEL 221

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 88.4 bits (220), Expect = 3e-20
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 39/214 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  ++TG+ SGIG   A+ LA+  A +VL          AL ++ +     + V   
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--DPAPALAEIAR--HGVKAVHHP 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHF 171
            +L+    I+       +++  + +L+NNAG+    P+++     E ++    +N    F
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQ--FPLESWDKIIALNLSAVF 115

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             T L +  ++      ++ + S            ++G  G   K     AY  +K    
Sbjct: 116 HGTRLALPGMRARNWGRIINIAS------------VHGLVGSTGK----AAYVAAK---- 155

Query: 227 YFGAE-----LYLKYADKGVDVSVVCPGWCYTNL 255
             G       + L+ A   V  + +CPGW  T L
Sbjct: 156 -HGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 87.6 bits (218), Expect = 3e-20
 Identities = 39/232 (16%), Positives = 77/232 (33%), Gaps = 40/232 (17%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
            + +ITGA+SG+G E AK          L  RS    +  L  +   +    +     +L
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCLS-NNVGYRARDL 56

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLT 174
           AS   ++   + +         ++++AG      ++E     E  +     N      + 
Sbjct: 57  ASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQE--QDPEQIQTLIENNLSSAINVL 111

Query: 175 NLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY--- 227
             L++R +     VV++ S+                    K   +  YC  K   +    
Sbjct: 112 RELVKRYKDQPVNVVMIMSTA---------------AQQPKAQES-TYCAVK---WAVKG 152

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMMVV 277
               + L+   K + +  V PG   T  +  +         +     A+M+ 
Sbjct: 153 LIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIH 204

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 87.6 bits (218), Expect = 4e-20
 Identities = 43/225 (19%), Positives = 76/225 (33%), Gaps = 36/225 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  IITG   G+G E A++     A VVL       G     +L             
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQH 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           L++   +  +       +++  +  L+NNAG+S  +  +  + E +     IN  G F+ 
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIG 117

Query: 174 TNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
              +I  ++      ++  SS             G  G         +Y  SK       
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAA-----------GLMG----LALTSSYGASK------W 156

Query: 230 A------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
                     ++     + V+ V PG  YT +     I+  +   
Sbjct: 157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY 201

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 87.6 bits (218), Expect = 5e-20
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 5/123 (4%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           E KV I+TG+  GIG   A+ LA+  A VV+   +    +   +++  +   G  + + +
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAV 65

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINHVGHF 171
           +++  +S K  A   + ++  I  L+NNA +   +K         E Y+    +N  G  
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 172 LLT 174
             T
Sbjct: 126 WCT 128

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 87.2 bits (217), Expect = 5e-20
 Identities = 46/245 (18%), Positives = 86/245 (35%), Gaps = 57/245 (23%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K+ ++TGA  G+G E  K+L++      LG     R  E L  L +      +  +E
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALG-----RNPEHLAALAEI---EGVEPIE 54

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            ++      +     + K    +  L++ A V+    I+    +   +  H  +N +   
Sbjct: 55  SDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEA--GSVAEWHAHLDLNVIVPA 111

Query: 172 LLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            L+  L+  ++     V+ + S              G       G++   Y  SK     
Sbjct: 112 ELSRQLLPALRAASGCVIYINSGA------------GNGPH--PGNTI--YAASK----- 150

Query: 228 FG---------AELYLKYADKGVDVSVVCPGWCYTNLFRH----ADIKFYQKVMIFP--I 272
                       E     A+ G+ VS V PG   T + +         F  ++ I P  I
Sbjct: 151 HALRGLADAFRKEE----ANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEI 206

Query: 273 AMMVV 277
           A  + 
Sbjct: 207 ANAIR 211

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 87.7 bits (218), Expect = 6e-20
 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD----GQIV 110
             ++ ++TGA+ GIG   A+ L +    VV   R        +E+L  E +     G ++
Sbjct: 31  RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR---T-VGNIEELAAECKSAGYPGTLI 86

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
               +L++ + I +    +  Q+  + + INNAG++
Sbjct: 87  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 122

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 87.2 bits (217), Expect = 7e-20
 Identities = 53/220 (24%), Positives = 81/220 (36%), Gaps = 39/220 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV IITG   GIG   A +  +  A V++  R    G++A + +       QI   +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG---TPDQIQFFQ 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            + +  D          K +  +  L+NNAG++V   ++E  TT   +     +N  G F
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEE--TTTAEWRKLLAVNLDGVF 118

Query: 172 LLT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             T      +  +     I+  SS+            G  G      S  AY  SK    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIE-----------GFVGD----PSLGAYNASK---- 159

Query: 227 YFG-------AELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                     A L     D  V V+ V PG+  T L    
Sbjct: 160 -GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 87.2 bits (217), Expect = 8e-20
 Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 41/219 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV +ITGA SG G   AK  AK  A VV+  R     +    ++         + + 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVA 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE-KLTTKEGYEVHFGINHVGHFL 172
            +++    +    +  + ++ K+ +L+NNAG+    +  +L   E ++   G+N  G +L
Sbjct: 62  ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 173 LTNLLIERIQK-------VVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           +T+ LI   ++        VI+  +S               +       +   Y  +K  
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVAS-----------TGAGRPRP----NLAWYNATK-- 164

Query: 225 NYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
               G        L ++ A   + V  + P    T L  
Sbjct: 165 ----GWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT 199

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 86.8 bits (216), Expect = 9e-20
 Identities = 25/120 (20%), Positives = 45/120 (37%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
              V ++TG +SGIG  T + L +  A V    R   R + A   L++     ++     
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++     ++ FA+   +      +L+NNAG         TT E +     +         
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 86.8 bits (216), Expect = 1e-19
 Identities = 38/218 (17%), Positives = 84/218 (38%), Gaps = 36/218 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
            + K  ++TG++ G+G   A  LA+    +V+        ++A  +  +E++    ++++
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR---SKKAALETAEEIEKLGVKVLV 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
           ++ N+     IK   + + + + ++ V +NNA   V  P+ E    +  ++    IN   
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVME--LEETHWDWTMNINAKA 116

Query: 170 HFLLT----NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--- 222
                     L+ +     ++  SSL              +      ++      SK   
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLG-----------SIRYLE--NYTT--VGVSKAAL 161

Query: 223 -LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             +  Y   EL    + K + V+ V  G   T+  +H 
Sbjct: 162 EALTRYLAVEL----SPKQIIVNAVSGGAIDTDALKHF 195

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 87.2 bits (217), Expect = 1e-19
 Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 43  SKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK 102
           S+ K   +Y   E KV ++TGA  GIG E AK LAK  + V+   R+    Q++ + +  
Sbjct: 31  SENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT----QKSCDSVVD 86

Query: 103 EVQD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           E++    +      +++  + I      ++ ++  + +L+NNAG+
Sbjct: 87  EIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 86.4 bits (215), Expect = 1e-19
 Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 30/208 (14%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV +ITG++SGIG   A+  AK  A +VL  R + R  EA   LK++    +++ + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAV 64

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           ++A+ + +    ++V   +    +L+NNAG      I E     E ++ ++ +  +    
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIME--AADEKWQFYWELLVMAAVR 122

Query: 173 LTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LMN 225
           L   L+  ++      ++   S                +    +      Y  +K  LM 
Sbjct: 123 LARGLVPGMRARGGGAIIHNASI------------CAVQPLWYEPI----YNVTKAALMM 166

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYT 253
             F   L  +     + V+ + PG   T
Sbjct: 167 --FSKTLATEVIKDNIRVNCINPGLILT 192

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 44/227 (19%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            G   ++TGA  GIG +T K L    A VV   R+       L  L KE    + V   +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPV--CV 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           +L  +D+     +  +     + +L+NNA + +  P  E   TKE ++  F +N    F 
Sbjct: 60  DLGDWDAT----EKALGGIGPVDLLVNNAALVIMQPFLE--VTKEAFDRSFSVNLRSVFQ 113

Query: 173 LTNL----LIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK----L 223
           ++ +    +I R     IV  SS++               F         Y ++K    +
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMV-----------AHVTFPN----LITYSSTKGAMTM 158

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQKVM 268
           +      EL        + V+ V P    T++ +   AD +F +K+ 
Sbjct: 159 LTKAMAMEL----GPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLK 201

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 86.4 bits (215), Expect = 1e-19
 Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 37/214 (17%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK  +ITGA  GIG + A+  A   A +VL  R +     A   L ++     +  + +
Sbjct: 19  DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ-FGTDVHTVAI 77

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           +LA  D+    A+   + +  + VL+NNAG+S   P+ +  T  + ++    +N     L
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVD--TDPQLFDATIAVNLRAPAL 135

Query: 173 LTN----LLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L +     ++   +   I+  +S                        + AYC SK     
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAA-----------ALAPLPD----HYAYCTSK----- 175

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNL 255
                     L  +    G+  + VCP    T +
Sbjct: 176 -AGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
            + +V ++TGA SGIG E A+ L K    V +  R     +E L    KE+++   +   
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADG 75

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
              ++ S   I+     V+++Y  + VL+NNAG  
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP 110

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 32/218 (14%)

Query: 49  PFYKPM------EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK 102
           P Y+ +        KV  ITG  SGIG+  A+   +     V+  RS+ R   A  KL  
Sbjct: 14  PAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG 73

Query: 103 EVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH 162
                + + + +++ +  ++       +K++ +I +LIN A  +        +   ++  
Sbjct: 74  A-TGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTV 132

Query: 163 FGINHVGHFLLTNLLIERIQKVVIVGSSLMDR--GTIDFDNLN-----GEKGFVQKGHSN 215
             I+  G F ++           ++         G I    +N     G +G   + H  
Sbjct: 133 MDIDTSGTFNVSR----------VLYEKFFRDHGGVI----VNITATLGNRGQALQVH-- 176

Query: 216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
               ++K         L +++  + + V+ + PG    
Sbjct: 177 --AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISG 212

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 86.0 bits (214), Expect = 2e-19
 Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GK  I+TG++ G+G   A +L  + A +VL          +L+   +E +     +V+
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGS---PASTSLDATAEEFKAAGINVVV 59

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            + ++ + + ++N  K  M  + +I +L+NNAG+
Sbjct: 60  AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 86.1 bits (214), Expect = 2e-19
 Identities = 42/234 (17%), Positives = 82/234 (35%), Gaps = 45/234 (19%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             K+ I+TGA SG+G   A  LA     V L  R      +AL++   E+     + +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR----LDALQETAAEI-GDDALCVPT 81

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINHVGHF 171
           ++   DS++      ++++ ++ VL NNAG    ++P+++   T   ++     N  G F
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMED--LTFAQWKQVVDTNLTGPF 139

Query: 172 LLTNLLIE--RIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           L T       + Q+     ++  GS            ++           +  Y  +K  
Sbjct: 140 LCTQEAFRVMKAQEPRGGRIINNGS------------ISATSPRP----YSAPYTATK-- 181

Query: 225 NYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPI 272
                A         L      +    +  G   T + +       Q  +   +
Sbjct: 182 ----HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKV 231

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 47/242 (19%)

Query: 57  KVCIITGANSGIGYETAKELAK-------LKATVVLGCRSMIRGQEALEKLKKEVQD--G 107
            + +ITGA  GIG   A E A+        +  +VL  R+       LEK+  E +    
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT----AADLEKISLECRAEGA 58

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGI 165
               +  +++    ++    +++++Y  I  L+NNAGV     +   LT ++        
Sbjct: 59  LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGAL-SDLTEEDFDYT-MNT 116

Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN---GEKGFVQKGHSNPAYCNSK 222
           N  G F LT        + +   + +  + +     +      K F  +  S   YC SK
Sbjct: 117 NLKGTFFLT--------QALF--ALMERQHSGHIFFITSVAATKAF--RHSSI--YCMSK 162

Query: 223 LMNYYFGAE-----LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMM 275
                FG       + L      V ++ V PG  YT ++   D +  Q +M+ P  IA  
Sbjct: 163 -----FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-MQALMMMPEDIAAP 216

Query: 276 VV 277
           VV
Sbjct: 217 VV 218

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 85.6 bits (213), Expect = 2e-19
 Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 6/94 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           +  KV ++TGA+ GIG+E A  LA   ATVV    S    Q + EK +  +++   +   
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATS----QASAEKFENSMKEKGFKARG 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           + LN++  +SI+NF   +  +   I +L+NNAG+
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 47/245 (19%), Positives = 87/245 (35%), Gaps = 39/245 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGK  +ITG+  GIG   A+   +  ATV +    + R ++A  ++           ++
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQ 60

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +++   DSI       ++    + +L+NNA +    PI E   T+E YE  F IN  G  
Sbjct: 61  MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVE--ITRESYEKLFAINVAGTL 118

Query: 172 LLT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
                    +I + +   I+  +S             G +G          YC +K    
Sbjct: 119 FTLQAAARQMIAQGRGGKIINMAS-----------QAGRRGEALVAI----YCATK---- 159

Query: 227 YFGAELYLK-----YADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGS 281
                   +          ++V+ + PG      +   D  F +           ++  +
Sbjct: 160 -AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEA 218

Query: 282 SLMDR 286
               R
Sbjct: 219 VPFGR 223

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 84.5 bits (210), Expect = 3e-19
 Identities = 39/223 (17%), Positives = 74/223 (33%), Gaps = 38/223 (17%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           +ITGA  G+G   A+ L      ++L  R       AL +L +EV  G   L   +LA  
Sbjct: 4   LITGATGGLGGAFARALK--GHDLLLSGRR----AGALAELAREV--GARAL-PADLADE 54

Query: 120 DSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLL 177
              K       ++   + +L++  G +    ++E    ++  E     + +    +    
Sbjct: 55  LEAKALL----EEAGPLDLLVHAVGKAGRASVRE--AGRDLVEEMLAAHLLTAAFVLKHA 108

Query: 178 IERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKY 236
             +   + V  G+                      G +  AY  +K     +      + 
Sbjct: 109 RFQKGARAVFFGAYP------------RYVQV--PGFA--AYAAAKGALEAYLEAARKEL 152

Query: 237 ADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMMVV 277
             +GV + +V      T L+         K  + P   A  V+
Sbjct: 153 LREGVHLVLVRLPAVATGLWAPLG--GPPKGALSPEEAARKVL 193

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 48/242 (19%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
               ++TG + GIG    + L + K   V+              +++      +  ++ +
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKAD 52

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLL 173
           L     I N    +  +      +  NAG+ +   I +     E  +    +N       
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFD--IDIESIKKVLDLNVWSSIYF 108

Query: 174 TNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
              L   ++    +V  GS               +           AY  SK      GA
Sbjct: 109 IKGLENNLKVGASIVFNGS---------DQCFIAKPNSF-------AYTLSK------GA 146

Query: 231 ------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLM 284
                  L L  A   + V+ VCPG   T+L+R+   K+   V I              +
Sbjct: 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL 206

Query: 285 DR 286
           +R
Sbjct: 207 NR 208

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 45/245 (18%), Positives = 83/245 (33%), Gaps = 50/245 (20%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             KV I+TG +SGIG      L +  A VV         +++   +    +        +
Sbjct: 13  TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD----EKSDVNVSDHFK--------I 60

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           ++ + + +K   +   K+Y +I +L+NNAG+    P+    T  E +     +N  G +L
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHL--TPTEIWRRIIDVNVNGSYL 118

Query: 173 LTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           +    I  +       ++ + S            +           +  AY  SK     
Sbjct: 119 MAKYTIPVMLAIGHGSIINIAS------------VQSYAAT----KNAAAYVTSK----- 157

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGS 281
             A       + + YA   +  + VCPG   T +   A      +        +      
Sbjct: 158 -HALLGLTRSVAIDYA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ 215

Query: 282 SLMDR 286
             M R
Sbjct: 216 HPMGR 220

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 42/218 (19%), Positives = 75/218 (34%), Gaps = 35/218 (16%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ KV IITG   GIG  TAK   +  A VV+   +   GQ+    +        I  + 
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG---SPDVISFVH 70

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVGHF 171
            ++   + ++N     + ++ K+ ++  N GV       +     E ++    IN  G F
Sbjct: 71  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 130

Query: 172 LLTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L+       +       IV  +S+                F      +  Y  +K     
Sbjct: 131 LVAKHAARVMIPAKKGSIVFTASIS--------------SFTAGEGVSHVYTATK----- 171

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             A       L  +  + G+ V+ V P    + L    
Sbjct: 172 -HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV 208

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 85.4 bits (212), Expect = 4e-19
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKL---KATVVLGCRSMIRGQEALEKLKKEVQD-- 106
           + +  K  +ITGA++GIG  TA E  +       ++L  R   R  E LE+LKK +    
Sbjct: 29  ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR---R-LEKLEELKKTIDQEF 84

Query: 107 --GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI 149
              ++ + +L++   + IK F +N+ +++  I +L+NNAG ++  
Sbjct: 85  PNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGS 129

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 84.4 bits (210), Expect = 4e-19
 Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GKV ++TGA+ GIG   A +LAK  A VV+        ++   ++  E++      + 
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG---NEQKANEVVDEIKKLGSDAIA 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +  ++A+ + + N  K  +  + ++ +L+NNAGV
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 84.9 bits (211), Expect = 4e-19
 Identities = 39/212 (18%), Positives = 87/212 (41%), Gaps = 30/212 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ +V I+TG    IG      LA+  A V++         +A+E L+   +   +  + 
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM--EGHDVSSVV 68

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV---PIKEKLTTKEGYEVHFGINHVGH 170
           +++ + +S++N  ++V +Q  ++ +L+  AG+ +     ++   T   +     IN  G 
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAED--MTDGQWLKQVDINLNGM 126

Query: 171 FLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--L 223
           F     +   + +     +V +GS            ++G      +  +   Y  SK  +
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGS------------MSGLIVNRPQQQAA--YNASKAGV 172

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNL 255
               +   L  ++A  G+  + V P +  T L
Sbjct: 173 HQ--YIRSLAAEWAPHGIRANAVAPTYIETTL 202

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 85.0 bits (211), Expect = 5e-19
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           +    K+ +ITGA+SGIG   A+  ++    ++L  R   R  E L+ L         + 
Sbjct: 12  RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR---R-VERLKALNLP----NTLC 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            ++++    +         K Y     ++NNAG+
Sbjct: 64  AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM 97

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 86.0 bits (213), Expect = 5e-19
 Identities = 38/225 (16%), Positives = 78/225 (34%), Gaps = 33/225 (14%)

Query: 39  SRSWSKLKASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI---RGQE 95
            +        P    + G    ITGA+ GIG   A + AK  A +V+  ++     +   
Sbjct: 28  QQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLG 87

Query: 96  ALEKLKKEVQD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL 153
            +    +E++   G+ +   +++     I    +  +K++  I +L+NNA          
Sbjct: 88  TIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLD 147

Query: 154 TTKEGYEVHFGINHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGF 208
           T  +  ++   +N  G +L +   I  ++K     ++ +   L                 
Sbjct: 148 TPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL------------NLNPV 195

Query: 209 VQKGHSNPAYCNSK----LMNYYFGAELYLKYADKGVDVSVVCPG 249
             K H   AY  +K    +       E         + V+ + P 
Sbjct: 196 WFKQHC--AYTIAKYGMSMYVLGMAEEF-----KGEIAVNALWPK 233

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 84.1 bits (209), Expect = 6e-19
 Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA 117
           + ++TGA +G G    +   +    V+   R   R QE L++LK E+    + + +L++ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGR---R-QERLQELKDELG-DNLYIAQLDVR 56

Query: 118 SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI 149
           +  +I+    ++  ++  I +L+NNAG+++ +
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGM 88

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 84.9 bits (211), Expect = 6e-19
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++GKV  +TG++ GIG+  A+  A+  A V +   S      A EK +   +        
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNS----HPADEKAEHLQKTYGVHSKA 87

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            + N++   S++       K +  I V + NAGV
Sbjct: 88  YKCNISDPKSVEETISQQEKDFGTIDVFVANAGV 121

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 84.1 bits (209), Expect = 7e-19
 Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 44/213 (20%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            G+  ++TGA  GIG  T + L    A VV   R+    Q  L+ L +E     I  + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT----QADLDSLVREC--PGIEPVCV 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           +L  +++     +  +     + +L+NNA V++  P  E   TKE ++  F +N      
Sbjct: 60  DLGDWEAT----ERALGSVGPVDLLVNNAAVALLQPFLE--VTKEAFDRSFEVNLRAVIQ 113

Query: 173 LT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           ++      LI R     IV  SS              ++       ++  YC++K     
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQC-----------SQRA----VTNHSVYCSTK----- 153

Query: 228 FGAELYLK-----YADKGVDVSVVCPGWCYTNL 255
              ++  K          + V+ V P    T++
Sbjct: 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 84.4 bits (210), Expect = 7e-19
 Identities = 41/215 (19%), Positives = 84/215 (39%), Gaps = 40/215 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK  ++TG+  G+G+  A+ LA   A V+L         E+++ L ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           ++    +I+     +  +   + +LINNAG+    P+ E L  +   +V    N    FL
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVE-LELENWQKV-IDTNLTSAFL 123

Query: 173 LT----NLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           ++      +I R    K++ +GS            L  +        +   Y  +K    
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGS------------LTSQAA----RPTVAPYTAAK---- 163

Query: 227 YFGA------ELYLKYADKGVDVSVVCPGWCYTNL 255
             G        +  ++A   +  + + PG+  T++
Sbjct: 164 --GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 85.3 bits (212), Expect = 7e-19
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%)

Query: 48  SPFYKPM------EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK 101
           SP  K M      +GKV  ITG  +G+G      L+ L A  V+  R M   +   E++ 
Sbjct: 12  SPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS 71

Query: 102 KEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
            +    ++  ++ ++   D ++N    ++K     +++INNA 
Sbjct: 72  SQ-TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA 113

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 84.5 bits (210), Expect = 7e-19
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 13/127 (10%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           ++ K  ++TG   GIG+   +E A   A +    R+    +  L +   + Q    Q+  
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN----EYELNECLSKWQKKGFQVTG 67

Query: 112 MELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSVPIKEKLT---TKEGYEVHFGINH 167
              + +     +   + V   +  K+ +LINN G    I+ K T   T E +  H   N 
Sbjct: 68  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA---IRSKPTLDYTAEDFSFHISTNL 124

Query: 168 VGHFLLT 174
              + L+
Sbjct: 125 ESAYHLS 131

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 83.7 bits (208), Expect = 7e-19
 Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 43/219 (19%)

Query: 54  MEG--KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           MEG     +ITGA+ GIG  TA+ L      V L  R     ++ L+ L  E+     + 
Sbjct: 1   MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAEL--EGALP 54

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVG 169
           +  ++            + + + ++  L+NNAGV V  P+ E   T E + +    N  G
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHE--LTLEEWRLVLDTNLTG 112

Query: 170 HFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            FL     +  + +     +V VGS     G   F                  Y  SK  
Sbjct: 113 AFLGIRHAVPALLRRGGGTIVNVGSLA---GKNPFKGGAA-------------YNASK-- 154

Query: 225 NYYFGAE-----LYLKYADKGVDVSVVCPGWCYTNLFRH 258
              FG         L   +  V V  V PG   T    +
Sbjct: 155 ---FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN 190

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 84.5 bits (210), Expect = 7e-19
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
              +  +IT    G+G +  ++L     +V +   S      A+E +K+  +D   ++  
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS---DTTAMETMKETYKDVEERLQF 61

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV 147
           ++ ++   + +    +  M  + KI  LINNAG  V
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYV 97

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 84.1 bits (209), Expect = 8e-19
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           M  ++  +TG   GIG    + L K    VV GC           K  ++ +        
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGP---NSPRRVKWLEDQKALGFDFYA 67

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            E N+  +DS K     V  +  +I VL+NNAG+
Sbjct: 68  SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 84.5 bits (210), Expect = 8e-19
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           K ++ +V I+TGA+ GIG   A ELA+  A V+    +    +   E +    +    + 
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT----EAGAEGIGAAFKQAGLEG 79

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
               LN+    ++    ++ +K++  ++VL+NNAG+
Sbjct: 80  RGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI 115

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 84.5 bits (210), Expect = 8e-19
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 45  LKASPFYKPM----EGKVCIITGA-NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEK 99
           L  +P         +GKV ++T A  +GIG  TA+      A VV+      R  E  ++
Sbjct: 7   LSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQ 66

Query: 100 LKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           L  ++  G++  +  ++ S +++       +++  ++ VL+NNAG+
Sbjct: 67  LA-DLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 84.1 bits (209), Expect = 8e-19
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
              K  ++TGA+ GIG   A +LA+    V +        +E  E + +E++        
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG---SKEKAEAVVEEIKAKGVDSFA 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           ++ N+A  D +K   K V+ Q+  + VL+NNAG+
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 84.1 bits (209), Expect = 8e-19
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQ 108
           +  ++GK  +ITG++ GIG  TA+  A+  A V L  R   +    +++    ++   G 
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGR---KAPANIDETIASMRADGGD 58

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP------IKEKLTTKEGYEVH 162
                 +LA+ ++ +      + ++  I VLINNAG  V       I +       Y+  
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDD-----TFYDAV 113

Query: 163 FGINHVGHFLLT 174
              N     + T
Sbjct: 114 MDANIRSVVMTT 125

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G+  ++TG   GIG   A   A+  A V +  RS       +  L +    G+++ ++
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQ 66

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            +++        A   ++++  I V+  NAGV
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGV 98

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 84.6 bits (210), Expect = 1e-18
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  +  ++TG   GIG   A   A+  A V +  RS         +L  E+  G ++ + 
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGNVIGVR 97

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           L+++   S  + A+ V+  +  + V+  NAG+
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGI 129

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 44/217 (20%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
           PM G+VC++TGA+ GIG   A +L K  ATV +  R      + L  + +E Q   GQ V
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH----LDTLRVVAQEAQSLGGQCV 57

Query: 111 LMELNLASFDSIKNFAKNVMK-QYPKIHVLINNAGVSVPIKE--------KLTTKEGYEV 161
            +  + +    +++  + V + Q  ++ VL+NNA   V            +       ++
Sbjct: 58  PVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDI 117

Query: 162 HFGINHVGHFLLTN----LLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
              +   GH+  +     L++   Q +++V SS                        N  
Sbjct: 118 -NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ----------------YMFNVP 160

Query: 218 YCNSK----LMNYYFGAELYLKYADKGVDVSVVCPGW 250
           Y   K     +      EL       GV    + PG 
Sbjct: 161 YGVGKAACDKLAADCAHEL----RRHGVSCVSLWPGI 193

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 83.7 bits (208), Expect = 1e-18
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           +   V I+TGA +GIG   A   AK  A+VV+         E  E +   ++   G+ + 
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK----SEGAEAVAAAIRQAGGKAIG 65

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           +E N+      +   K  + Q+ KI VL+NNAG   P    +   +     F +N    F
Sbjct: 66  LECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWA-FKLNLFSLF 124

Query: 172 LLT 174
            L+
Sbjct: 125 RLS 127

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
           +  ++ ++TGA+ GIG   A ELA   A V +   S      A +++   +    G+   
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS---SAGAADEVVAAIAAAGGEAFA 82

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           ++ +++    ++     V++++ ++ VL+NNAG+
Sbjct: 83  VKADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 83.7 bits (208), Expect = 1e-18
 Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 41/219 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TG  SG+G E  K L    A V     +   GQ+   +L       + + + 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-----ERSMFVR 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            +++S          V ++   ++VL+NNAG+ +   ++      E +     IN    F
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET--GRLEDFSRLLKINTESVF 116

Query: 172 LLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           +     I  +++    +I  +S           ++              Y  SK      
Sbjct: 117 IGCQQGIAAMKETGGSIINMAS-----------VSSWLP----IEQYAGYSASK------ 155

Query: 229 GA------ELYLKYADKGVDVSV--VCPGWCYTNLFRHA 259
            A         L    +G  + V  + P   YT + + +
Sbjct: 156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS 194

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 35/217 (16%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
             +EGKV ++TGA  GIG E A EL +    V++   +     E+ E++   ++      
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDA 81

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
             ++ N+   + I    +  +K + K+ ++ +N+GV     +K+   T E ++  F IN 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD--VTPEEFDRVFTINT 139

Query: 168 VGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK-- 222
            G F +     + ++    ++++GS       +               H+   Y  SK  
Sbjct: 140 RGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-------------PKHAV--YSGSKGA 184

Query: 223 --LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                     ++    ADK + V+VV PG   T+++ 
Sbjct: 185 IETFARCMAIDM----ADKKITVNVVAPGGIKTDMYH 217

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 83.7 bits (208), Expect = 1e-18
 Identities = 43/219 (19%), Positives = 74/219 (33%), Gaps = 42/219 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV I+TGA +GIG   A+ LA     V+           A  K+             
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACR 81

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           ++++    I       +  +  +  L+ NAGV     + +  TT E ++    IN  G +
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLID--TTVEDFDRVIAINLRGAW 139

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           L T     R+ +     +V + S            L G+           AY  SK    
Sbjct: 140 LCTKHAAPRMIERGGGAIVNLSS------------LAGQVAVG----GTGAYGMSK---- 179

Query: 227 YFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                         +    G+  + + P +  T + + A
Sbjct: 180 --AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA 216

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 36/215 (16%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIV 110
               KV I+TGA+ GIG   A  LA    TVV+          A E++  +++   G+ +
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAG---KAAAAEEVAGKIEAAGGKAL 80

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHV 168
             + +++   +++       + +  + VL+NNAG+     I E  T    ++    +N  
Sbjct: 81  TAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAE--TGDAVFDRVIAVNLK 138

Query: 169 GHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--- 222
           G F       +R++    ++ + +S                      +    Y  +K   
Sbjct: 139 GTFNTLREAAQRLRVGGRIINMSTSQ------------VGLLHP--SYGI--YAAAKAGV 182

Query: 223 -LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
             M +    EL      + + V+ V PG   T+LF
Sbjct: 183 EAMTHVLSKEL----RGRDITVNAVAPGPTATDLF 213

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 83.7 bits (208), Expect = 1e-18
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  ++TGA  GIG   A+      A V L        ++ L+++  ++    + +  
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR----EDKLKEIAADLG-KDVFVFS 79

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            NL+   SIK  A+   ++   I +L+NNAG+
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVL 111
              +V  +TG   G+G   ++ L      V +         + +       +D       
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE---RNDHVSTWLMHERDAGRDFKA 79

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
             +++A F+S +  A+ V+  + K+ VLINNAG+
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 33/213 (15%)

Query: 52  KPM----EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG 107
             M    +GK  ++TG+ +GIG   A  L    A V++  R      E +++++ +  D 
Sbjct: 2   NAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA 61

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGI 165
            +  +  +L +        ++V+++YPK+ +LINN G+   V   +     E +   F +
Sbjct: 62  ILQPVVADLGTEQGC----QDVIEKYPKVDILINNLGIFEPVEYFD--IPDEDWFKLFEV 115

Query: 166 NHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
           N +    LT   ++++ +     V+ + S                    +  H    Y  
Sbjct: 116 NIMSGVRLTRSYLKKMIERKEGRVIFIASE------------AAIMPSQEMAH----YSA 159

Query: 221 SKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
           +K M       L        V V+ + PG   T
Sbjct: 160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLT 192

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 83.3 bits (207), Expect = 2e-18
 Identities = 45/215 (20%), Positives = 71/215 (33%), Gaps = 43/215 (20%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK  ++TG   GIG   A+  A+  A V L             + K+  +       ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR--------PEGKEVAEAIGGAFFQV 56

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           +L        F +       ++ VL+NNA ++              +     +N      
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALT--VRLPEWRRVLEVNLTAPMH 114

Query: 173 LTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           L+ L    ++KV    IV  +S+   G      L  E+        N AY  SK      
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQ--G------LFAEQE-------NAAYNASK------ 153

Query: 229 GA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
           G        L L  A   + V+ V PG   T    
Sbjct: 154 GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL 188

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              K  I+TG N GIG    + +A   A V +  RS     E  EK+ KE    +    +
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE-FGVKTKAYQ 70

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
            ++++ D +    + +      I  LI NAGVS
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVS 103

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 40/218 (18%), Positives = 82/218 (37%), Gaps = 30/218 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSM------IRGQEALEKLKKEVQ 105
           ++ KV ++TG   G G   A +LA+  A ++L   C  +      +     LE+   EV+
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
               +    E+++    ++     N + ++ K+ V++ NAG+           + +   F
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAH--LPVQAFADAF 125

Query: 164 GINHVGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
            ++ VG     +  +  +     ++  GS     G I      G  G    G +   Y  
Sbjct: 126 DVDFVGVINTVHAALPYLTSGASIITTGSVA---GLIAAAQPPGAGGPQGPGGAG--YSY 180

Query: 221 SK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
           +K             +L  + A + +  +V+ P    T
Sbjct: 181 AKQLVDSYTL-----QLAAQLAPQSIRANVIHPTNVNT 213

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TG+  GIG   A++LA   +TV++   S  R +   E++  +    +   +E
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK-YGVKAHGVE 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +NL S +SI    + +      I +L+NNAG+
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 83.1 bits (206), Expect = 2e-18
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
                +   +TG +SGIG   A+ LA     V    R      + +      ++     +
Sbjct: 20  HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD----AKNVSAAVDGLRAAGHDV 75

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS 146
                ++ S D +       ++++  I +L+N+AG +
Sbjct: 76  DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN 112

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 82.6 bits (205), Expect = 3e-18
 Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  ++TGA SGIG       A+  A++V   R      EA+  L     + + + + 
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVV 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            +++   +++      ++++ ++H + + AGV
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 81.8 bits (203), Expect = 5e-18
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 46/249 (18%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
            KV ++TG   GIG   +++LA     + +    + + +E   +  K ++    + V + 
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVAD--LPQQEEQAAETIKLIEAADQKAVFVG 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           L++    +  +      ++     VL+NNAG++   P+ E   T+E  +  + +N    F
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLE--VTEEDLKQIYSVNVFSVF 117

Query: 172 LLT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
                      E   K  I+  +S           +   +GF         Y  +K    
Sbjct: 118 FGIQAASRKFDELGVKGKIINAAS-----------IAAIQGFPILSA----YSTTK---- 158

Query: 227 YFG---------AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVV 277
            F           EL    A KG  V+   PG   T ++   D +  +            
Sbjct: 159 -FAVRGLTQAAAQEL----APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE 213

Query: 278 IVGSSLMDR 286
              S  + R
Sbjct: 214 YSSSIALGR 222

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 81.9 bits (203), Expect = 6e-18
 Identities = 18/121 (14%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +     +ITGA+  +G   A  L +    V++  R+      ++     E++    V + 
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRT---EHASVT----ELRQAGAVALY 77

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            + +    I  F   +  Q   +  +++NA   +  +      + +   F ++ +  +L+
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLA-ETPGEEADNFTRMFSVHMLAPYLI 136

Query: 174 T 174
            
Sbjct: 137 N 137

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 81.4 bits (202), Expect = 7e-18
 Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 40/224 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GKV +++G   G+G    + +    A VV G      G+    +L           + 
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVH 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           L++      K      +  +  +HVL+NNAG+     I++       ++    +N  G F
Sbjct: 60  LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED--YALTEWQRILDVNLTGVF 117

Query: 172 LLTNLLIERIQKV---VIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L    +++ +++     I+  SS+            G  G      +   Y  +K     
Sbjct: 118 LGIRAVVKPMKEAGRGSIINISSIE-----------GLAG----TVACHGYTATK----- 157

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQ 265
             A         L+    G+ V+ + PG   T +        +Q
Sbjct: 158 -FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQ 200

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 81.4 bits (202), Expect = 7e-18
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EGKV ++TGA+ GIG   A+ LA+  A V+    S    +   + +   +       M 
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS----ESGAQAISDYLG-DNGKGMA 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           LN+ + +SI+   K +  ++  + +L+NNAG+
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 81.4 bits (202), Expect = 7e-18
 Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 37/214 (17%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            G+V ++TG + G+G+  A+ LA+   +VV+  R++    EA +KL ++    + +    
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK-YGVETMAFRC 78

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHFL 172
           ++++++ +K   + V +++ K+  ++N AG++   P +E     + +     +N  G + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEE--FPLDEFRQVIEVNLFGTYY 136

Query: 173 LT----NLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           +     +LL E     ++ +GS  ++  T+                   AY  SK     
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPN---------------ISAYAASK----- 176

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNL 255
            G        L  ++   G+ V+V+ PGW  T +
Sbjct: 177 -GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 81.2 bits (201), Expect = 8e-18
 Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 40/212 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
              K  ++ G +  +G E  K         +          +                  
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------------SFT 65

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFL 172
           +  +  + IK+  + +  +  K+   +  AG             +  +    +N    F 
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFA 125

Query: 173 LTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK----LMN 225
             ++  + + +    V+ G+S           LN   G +       AY  +K     + 
Sbjct: 126 SAHIGAKLLNQGGLFVLTGASA---------ALNRTSGMI-------AYGATKAATHHII 169

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
               +E        G     + P    T   R
Sbjct: 170 KDLASE--NGGLPAGSTSLGILPVTLDTPTNR 199

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 81.0 bits (201), Expect = 9e-18
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
            V ++TGA+ GIG   A  L K    V++      R  +A E++ K+++   GQ +    
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA---RSAKAAEEVSKQIEAYGGQAITFGG 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +++    ++   K  +  +  I V++NNAG+
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 36/213 (16%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI---RGQEALEKLKKEVQD--G 107
            + GK   ITGA+ GIG   A   A+  A V +  +S +   +    +      V    G
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGI 165
           Q + ++ ++   D ++      +  +  I +L+NNA         +  T  + +++   +
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLD--TPMKRFDLMQQV 120

Query: 166 NHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
           N  G F+     +  + +     ++ +                    +    H+   Y  
Sbjct: 121 NARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP----------AWW--GAHTG--YTL 166

Query: 221 SK----LMNYYFGAELYLKYADKGVDVSVVCPG 249
           +K    L+     AE       +GV ++ + P 
Sbjct: 167 AKMGMSLVTLGLAAEF----GPQGVAINALWPR 195

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 50/233 (21%), Positives = 88/233 (37%), Gaps = 45/233 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  I+TG + GIG   A+ L K  ATV +          A + +   +++G   + E
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD----VMAAQAVVAGLENGGFAV-E 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           +++    S+    +  +       +L  NAGVS   P  +   T E ++ +F +N  G F
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVD--ITDEEWDFNFDVNARGVF 122

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGT----IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L         Q         +   T    ++  +L  + G      ++  Y  SK     
Sbjct: 123 LAN-------QIAC---RHFLASNTKGVIVNTASLAAKVGAP--LLAH--YSASK----- 163

Query: 228 FG---------AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP 271
           F           E+    A K + V+ VCPG+  T +     I   +   + P
Sbjct: 164 FAVFGWTQALAREM----APKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTP 212

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 42/222 (18%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
             ++GKV ++TGA+ GIG   AK LA   A V +   +    +E  E+   E+Q   G  
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN---RKEEAEETVYEIQSNGGSA 59

Query: 110 VLMELNLASFDSIKNFAKNVMKQ------YPKIHVLINNAGVSV--PIKEKLTTKEGYEV 161
             +  NL S   ++    ++  +        K  +LINNAG+     I+E  TT++ ++ 
Sbjct: 60  FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEE--TTEQFFDR 117

Query: 162 HFGINHVGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAY 218
              +N    F +    + R++    ++ + S+                           Y
Sbjct: 118 MVSVNAKAPFFIIQQALSRLRDNSRIINISSAA------------TRISLP--DFIA--Y 161

Query: 219 CNSK----LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF 256
             +K     M +    +L      +G+ V+ + PG+  T++ 
Sbjct: 162 SMTKGAINTMTFTLAKQL----GARGITVNAILPGFVKTDMN 199

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 35/217 (16%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
             ++GKV ++TG+  GIG   A  L +L A VV+   +     +  EK+  E++      
Sbjct: 14  GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN---STKDAEKVVSEIKALGSDA 70

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
           + ++ ++     I       +  +  + + ++N+GV     +K+   T+E ++  F +N 
Sbjct: 71  IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD--VTEEEFDRVFSLNT 128

Query: 168 VGHFLLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK-- 222
            G F +       + +   +V+  S+     ++               HS   Y  SK  
Sbjct: 129 RGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSV-------------PKHSL--YSGSKGA 173

Query: 223 --LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                  F  +      DK + V+ V PG   T++F 
Sbjct: 174 VDSFVRIFSKDC----GDKKITVNAVAPGGTVTDMFH 206

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 37/212 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI---RGQEALEKLKKEVQD--GQ 108
           + GK   I+G + GIG   AK +A   A V L  +S     +    +    KE+++  GQ
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGIN 166
            + +  ++   D++       ++Q+  I + +NNA       I+E     + +++  GI 
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEE--VPLKRFDLMNGIQ 124

Query: 167 HVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
             G + ++   I  ++      ++ +   +                      +   Y  +
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW-------------LRPT--PYMMA 169

Query: 222 K----LMNYYFGAELYLKYADKGVDVSVVCPG 249
           K    L       EL     D G+  + + P 
Sbjct: 170 KYGMTLCALGIAEEL----RDAGIASNTLWPR 197

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 80.2 bits (199), Expect = 1e-17
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K  +ITGA  GIG  T +  AK  A +V               L++  +      + 
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE-------GPLREAAEAVGAHPVV 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +++A   S++      +    ++  +++ AG+
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGI 87

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            G+V +ITG  SG+G           A V +  +S     E L +L+     G  V +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKS----AERLRELEVAH-GGNAVGVVG 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKL--TTKEGYEVHFGINHVG 169
           ++ S    K  A+  +  + KI  LI NAG+   S  + +         ++  F +N  G
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 170 HFLLT 174
           +    
Sbjct: 119 YIHAV 123

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 79.8 bits (198), Expect = 2e-17
 Identities = 41/216 (18%), Positives = 79/216 (36%), Gaps = 45/216 (20%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV I+T A  GIG   A   A+  A V+    +    +  L++L+K      I    
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN----ESKLQELEKY---PGIQTRV 56

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
           L++     I  FA     +  ++ VL N AG      + +    ++ ++    +N    +
Sbjct: 57  LDVTKKKQIDQFA----NEVERLDVLFNVAGFVHHGTVLD--CEEKDWDFSMNLNVRSMY 110

Query: 172 LLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           L+    + ++       +I  SS+                 V+   +   Y  +K     
Sbjct: 111 LMIKAFLPKMLAQKSGNIINMSSVA--------------SSVKGVVNRCVYSTTK----- 151

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
             A       +   +  +G+  + VCPG   T   +
Sbjct: 152 -AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ 186

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 42/207 (20%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           + KV +ITGA+ GIG    +        VV   RS            K   D  I  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS-----------IKPSADPDIHTVAG 75

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINHVGHF 171
           +++  ++     +  ++++ +I  L+NNAGV      K     T+E Y+ + G+N  G F
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGV---FLAKPFVEMTQEDYDHNLGVNVAGFF 132

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
            +T        +     + ++ +G+   +       ++  V  G  +     +K      
Sbjct: 133 HIT--------QRAA--AEMLKQGSGHIVSITTSLVDQPMV--GMPSALASLTK-----G 175

Query: 229 GAELYLK-----YADKGVDVSVVCPGW 250
           G     +     ++  GV V+ V PG 
Sbjct: 176 GLNAVTRSLAMEFSRSGVRVNAVSPGV 202

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 80.4 bits (199), Expect = 3e-17
 Identities = 47/226 (20%), Positives = 78/226 (34%), Gaps = 39/226 (17%)

Query: 48  SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD- 106
            P    ME    ++TGA   IG   A +L +    VV+   +     EA   L  E+   
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN---SAEAAVSLADELNKE 71

Query: 107 --GQIVLMELNLASFD----SIKNFAKNVMKQYPKIHVLINNAGVSVP----------IK 150
                V+ + +L + +    S +    +  + + +  VL+NNA    P            
Sbjct: 72  RSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS 131

Query: 151 EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-----GE 205
              T +       G N +  FLLT    +R +      +S     +I    +N      +
Sbjct: 132 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTS--SNLSI----VNLCDAMVD 185

Query: 206 KGFVQKGHSNPAYCNSK--LMNYYFGAELYLKYADKGVDVSVVCPG 249
           +       S   Y   K  L+         L+ A  G+ V+ V PG
Sbjct: 186 QPC--MAFSL--YNMGKHALVG--LTQSAALELAPYGIRVNGVAPG 225

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 79.5 bits (197), Expect = 3e-17
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + + GK  ++TGA  GIG   A  LA   ATV++   +     E  +     +   +   
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN----AEGAKAAAASI-GKKARA 56

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           +  +++   S+K     +      I +L+NNA +
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASI 90

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 79.5 bits (197), Expect = 4e-17
 Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 45/246 (18%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
           +  +  KV I+TGA+ GIG   A+      + V+          +               
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDH------------ 50

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
            +E ++ + D +K    ++ K+Y  I VL+NNAG+    K +  +   +     +N  G+
Sbjct: 51  -IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGY 109

Query: 171 FLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
           +  +   I  + +     ++  SS+              K          AY  SK    
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNISSVQ--A------SIITKNA-------SAYVTSK---- 150

Query: 227 YFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVG 280
              A       + L YA   +  + VCP    T L R A         +     +     
Sbjct: 151 --HAVIGLTKSIALDYA-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH 207

Query: 281 SSLMDR 286
              M R
Sbjct: 208 EHPMQR 213

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 79.5 bits (197), Expect = 4e-17
 Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 40/214 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +G    +TGA SGIG E  +  A   A ++L  R       AL++  +E+       +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDRE----AAALDRAAQELGAAVAARIVA 65

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHFL 172
           ++   +++   A    +    + +L+N+AG++       +       +V   +N  G F 
Sbjct: 66  DVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDA-LETDDATWRQV-MAVNVDGMFW 122

Query: 173 LT----NLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            +      ++ R    +V +GS            ++G            +Y  SK     
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGS------------MSGTIVNR--PQFASSYMASK----- 163

Query: 228 FGA------ELYLKYADKGVDVSVVCPGWCYTNL 255
            GA       L  ++A +GV V+ + PG+  T +
Sbjct: 164 -GAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 79.5 bits (197), Expect = 4e-17
 Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 12/150 (8%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
             + GK   +TG + GIG   AK LA   A V L   +     E  + +  E++   G+ 
Sbjct: 27  ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN---AAERAQAVVSEIEQAGGRA 83

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINH 167
           V +  +    ++I+   +  ++    + +L+N+AG+    P++E  TT   ++    +N 
Sbjct: 84  VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEE--TTVADFDEVMAVNF 141

Query: 168 VGHFLLTNLLIERIQK---VVIVGSSLMDR 194
              F+        +     ++ +GS+L + 
Sbjct: 142 RAPFVAIRSASRHLGDGGRIITIGSNLAEL 171

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 47/244 (19%), Positives = 80/244 (32%), Gaps = 40/244 (16%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
           KV ++TGA  GIG   A  L K    V +   +        + +  E+    G  V +++
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN----DATAKAVASEINQAGGHAVAVKV 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFL 172
           +++  D +    +   K      V++NNAGV+   PI+    T E  +  + IN  G   
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIES--ITPEIVDKVYNINVKGVIW 116

Query: 173 LT----NLLIERIQKVVIVG-SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
                     +      I+   S             G  G  +       Y +SK     
Sbjct: 117 GIQAAVEAFKKEGHGGKIINACSQA-----------GHVGNPELAV----YSSSK----- 156

Query: 228 FGAELYLK-----YADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSS 282
           F      +      A  G+ V+  CPG   T ++   D +  +                 
Sbjct: 157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI 216

Query: 283 LMDR 286
            + R
Sbjct: 217 TLGR 220

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 79.6 bits (197), Expect = 5e-17
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 7/127 (5%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
                 V I+TG   GIG   A+ LA     + +         E +  +  E+     ++
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG---DAEGVAPVIAELSGLGARV 81

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINH 167
           + +  +LA   S +     V+ ++ +I  L+NNAG++  +++       E ++   G+N 
Sbjct: 82  IFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL 141

Query: 168 VGHFLLT 174
            G    T
Sbjct: 142 RGTVFFT 148

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-----VQD 106
             +   + ++TGA SGIG   +  LA   ATV          QE +  L           
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKI-HVLINNAGV 145
           G     + +++   + +   + V   + +   V+++ AG+
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 81.2 bits (201), Expect = 6e-17
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           KP++GKV ++TGA  GIG   A+  A+  ATVV           A E LK+         
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD-----GAAEDLKRVADKVGGTA 263

Query: 112 MELNLASFDSIKNFAKNVMKQY-PKIHVLINNAGV 145
           + L++ + D++     +V + +  K+ +L+NNAG+
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 78.3 bits (194), Expect = 7e-17
 Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + ++ K+ +ITG  +GIG   A+  A   A + +         EA   ++      +++ 
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNL--GRRVLT 58

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           ++ +++    ++ F K V+  + +  +L+NNAG+
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGI 92

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 78.8 bits (195), Expect = 7e-17
 Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 47/224 (20%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIV 110
            EG++ ++TG  +G+G   A+ L+    +VV+  R      + L+    E+       + 
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR----PDVLDAAAGEIGGRTGNIVR 86

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINH 167
            +  ++   D +      V  ++ ++ +L+NNAG     VP++E   T E +      N 
Sbjct: 87  AVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEE--VTFEQWNGIVAANL 144

Query: 168 VGHFLLTNLLIERIQK-------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCN 220
            G FL T      ++        ++  GS            ++ +         +  Y  
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGS------------ISAQTPRPN----SAPYTA 188

Query: 221 SKLMNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRH 258
           +K       A         L      +    +  G   T++   
Sbjct: 189 TK------HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR 226

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 78.7 bits (195), Expect = 7e-17
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 10/128 (7%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           +    +  ++ GA   IG   A   A+  A VVL         E       E++      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG---AAEGAATAVAEIEKLGRSA 60

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGIN 166
           + ++ +L +   ++        ++ +IH L++ AG       I E    +  +     +N
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAE--MDEAFWHQVLDVN 118

Query: 167 HVGHFLLT 174
               FL  
Sbjct: 119 LTSLFLTA 126

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 79.4 bits (196), Expect = 8e-17
 Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 37/217 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQD--GQIV 110
           M  K+ +ITGA+SG G  TA+ LA     V    R +  R    +E +    +D    + 
Sbjct: 3   MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR 62

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHV 168
            +EL++ S  S+      ++ +  +I VLI+NAG  V  P +    T E +   + IN +
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA--FTPEQFAELYDINVL 120

Query: 169 GHFLLTNLLIE--RIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
               +    +   R QK   ++ + SS                           Y  +K 
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSS---SAGGTPPYLA------------PYFAAK- 164

Query: 224 MNYYFGAE-----LYLKYADKGVDVSVVCPGWCYTNL 255
                  +        + +  G++ S++ PG   +  
Sbjct: 165 ----AAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 77.9 bits (193), Expect = 1e-16
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIVLME 113
           +  +ITGA+ GIG   A  LA+    + +        +E  E++ +E +      + ++ 
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQ---NREKAEEVAEEARRRGSPLVAVLG 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            NL   ++         +    +  L+NNAG+
Sbjct: 59  ANLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 42/221 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSM------IRGQEALEKLKKEVQ 105
           + GKV  ITGA  G G   A  LA   A ++    C  +      +   E L    K V+
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
           D   +IV  + ++   +S+    +  + +  ++ +++ NAG++          +G+    
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPM----SAGDDGWHDVI 126

Query: 164 GINHVGHFLLTNLLIERIQK------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
            +N  G +    + I  + K      +V++ S              G  G       +  
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS------------SAGLAGVGSADPGSVG 174

Query: 218 YCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
           Y  +K     LM            A + + V+ + P    T
Sbjct: 175 YVAAKHGVVGLMR-----VYANLLAGQMIRVNSIHPSGVET 210

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 78.0 bits (193), Expect = 1e-16
 Identities = 35/201 (17%), Positives = 78/201 (38%), Gaps = 22/201 (10%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK+ ++T  +SG+G+ +A ELA+  A ++L  R+  + + A  ++   V   Q+ ++  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++     I    +   +      +L+ + G   P +      E ++  + +       + 
Sbjct: 66  DIREPGDIDRLFEKA-RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
               E++ +     +V +GS                + +     SN       ++     
Sbjct: 125 RRAAEQMVEKGWGRMVYIGSV------------TLLRPWQDLALSNIM--RLPVIG--VV 168

Query: 230 AELYLKYADKGVDVSVVCPGW 250
             L L+ A  GV V+ V P  
Sbjct: 169 RTLALELAPHGVTVNAVLPSL 189

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---G 107
           ++  E    +ITG    IG+  A  L +    VV+  R     + A ++L  E+     G
Sbjct: 6   HEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRH---SEGAAQRLVAELNAARAG 62

Query: 108 QIVLMELNLASFDSIKNFAKN----VMKQYPKIHVLINNAGV-----------SVPIKEK 152
             VL + +L+   S+ +  ++      + + +  VL+NNA             +    + 
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADA 122

Query: 153 LTTKEGYEVHFGINHVGHFLLT 174
                     FG N V    L 
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLI 144

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 56/243 (23%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
            + +I+G  +GIG  T K L      +V       R  E +  L       Q +      
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI---RDAEVIADLSTAEGRKQAI------ 52

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
                    A  + K    +  L+  AG+           +       +N+ G   L + 
Sbjct: 53  ---------ADVLAKCSKGMDGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDA 96

Query: 177 LIERIQK-----VVIVGS------------SLMDRGTIDFDNLNGEKGFVQKGHSNPAYC 219
            +  ++K      V++ S              +     +            +   N AY 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 220 NSKLMNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQKVMIFP 271
            SK       A      +    + + GV ++ + PG   T L +    D ++ + +  F 
Sbjct: 157 GSK------NALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV 210

Query: 272 IAM 274
             M
Sbjct: 211 PPM 213

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 54  MEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQ 108
           ++GKV ++TGA    G+G E A+  A++ A V +   S     +  E+  KE++     +
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYAS---RAQGAEENVKELEKTYGIK 74

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
               +  + S++S +   K+V+  + +I   I NAG 
Sbjct: 75  AKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA 111

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 11/148 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ +V I+TGA+SG+G    + LA+  ATV+        G+E   +L        +    
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRN 59

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI----KEKLTTKEGYEVHFGINHVG 169
            ++ +            +++  +H L+N AG +       +      + +     +N +G
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTI 197
            F +  L  E + +         +RG I
Sbjct: 120 TFNMIRLAAEVMSQGEPDADG--ERGVI 145

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 77.2 bits (191), Expect = 3e-16
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
           +  V ++TG + GIG    +  A+    V +   +    +EA + +   + +  G+ V +
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAA---NREAADAVVAAITESGGEAVAI 81

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV---SVPIKEKLTTKEGYEVHFGINHVG 169
             ++ +   I      V +Q+ ++  L+NNAG+      + E   + E  E    +N  G
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDE--MSVERIERMLRVNVTG 139

Query: 170 HFLLT 174
             L  
Sbjct: 140 SILCA 144

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 76.8 bits (190), Expect = 3e-16
 Identities = 49/239 (20%), Positives = 83/239 (34%), Gaps = 53/239 (22%)

Query: 35  RYFKSRSWSKLKASPFYKPM---EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI 91
            +  S        + +++ M   EGKV ++TGA  GIG      L    A V +  R++ 
Sbjct: 4   HHHHSSGVDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63

Query: 92  RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PI 149
                L              +  +L            V     ++ +++NNAGV     I
Sbjct: 64  GIAADLH-------------LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRI 110

Query: 150 KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNG 204
            E  TT   + +  G+N    F +    I  +       +V V S              G
Sbjct: 111 TE--TTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVAS------------CWG 156

Query: 205 EKGFVQKGHSNPAYCNSKLMNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFR 257
            +     GH+   YC +K       A       + + +A +G+ ++ VCP    T + R
Sbjct: 157 LRP--GPGHAL--YCLTK------AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLR 205

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 76.1 bits (188), Expect = 6e-16
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G V +ITG  SG+G  TA+ L    A+ VL       G+   +KL         V   
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAP 64

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK------EKLTTKEGYEVHFGINH 167
            ++ S   ++        ++ ++ V +N AG++V  K       +  T E ++    +N 
Sbjct: 65  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124

Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTI 197
           +G F +  L+   + +          RG I
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGG--QRGVI 152

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 76.1 bits (188), Expect = 7e-16
 Identities = 43/222 (19%), Positives = 77/222 (34%), Gaps = 43/222 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSMIRG-------QEALEKLKKEV 104
           +EG+V  ITGA  G G   A  +A   A ++       +           + L +  + V
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 105 QD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH 162
           +    +IV   ++   FD ++    + +    ++ +++ NAGV+ P      T E +   
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128

Query: 163 FGINHVGHFLLTN----LLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP 216
             IN  G +         +IE  +   ++++ S              G K      H   
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISS------------AAGMKMQPFMIH--- 173

Query: 217 AYCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
            Y  SK     L           +     + V+ V PG   T
Sbjct: 174 -YTASKHAVTGLAR-----AFAAELGKHSIRVNSVHPGPVNT 209

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 75.3 bits (186), Expect = 9e-16
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 47/208 (22%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK   +TGA  GIGY TA    +  A V    ++     +       EV         +
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA---FTQEQYPFATEV---------M 53

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHFGINHVGHF 171
           ++A    +    + ++ +  ++  L+N AG+   ++       +KE ++  F +N  G F
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGI---LRMGATDQLSKEDWQQTFAVNVGGAF 110

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK---- 222
            L    + + ++     +V V S                   +  G S   Y  SK    
Sbjct: 111 NLFQQTMNQFRRQRGGAIVTVAS------------DAAHTPRI--GMSA--YGASKAALK 154

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGW 250
            +    G EL    A  GV  +VV PG 
Sbjct: 155 SLALSVGLEL----AGSGVRCNVVSPGS 178

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 75.7 bits (187), Expect = 9e-16
 Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 43/222 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSMIRG-------QEALEKLKKEV 104
           ++G+V  ITGA  G G   A  LA   A ++    C  +           E L++  + V
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 105 QD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVH 162
           +D   + +   L++    +++    + M+Q+ ++ V++ NAGV    +    T E ++  
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132

Query: 163 FGINHVGHFLLTN----LLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP 216
            G+N  G +         +IE      +V+V S              G K     GH   
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS------------SAGLKATPGNGH--- 177

Query: 217 AYCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
            Y  SK     L N      L ++  + G+ V+ + P    T
Sbjct: 178 -YSASKHGLTALTN-----TLAIELGEYGIRVNSIHPYSVET 213

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 44/266 (16%), Positives = 92/266 (34%), Gaps = 49/266 (18%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EG   I++G   G+G  T + L      VV+   +  +G+   ++L       +   +  
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVST 83

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEG-------YEVHFGINH 167
           N+ S DS+    +   +     + ++ + G  V   +++  ++G       +     +  
Sbjct: 84  NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYL 141

Query: 168 VGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGHSNPAYCNSK---- 222
            G + +  L+   I       +   +RG +         G+  Q G +  AY  +K    
Sbjct: 142 NGTYNVARLVAASIAAAEPRENG--ERGAL--VLTASIAGYEGQIGQT--AYAAAKAGVI 195

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV--MI-FP-------- 271
            +      +L    +  G+ V+ + PG   T +      +   K    I FP        
Sbjct: 196 GLTIAAARDL----SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDE 251

Query: 272 IAMMVVIVGSSLMDRGTIDFDNLNGE 297
            A     + ++           +NGE
Sbjct: 252 FADAAAFLLTNGY---------INGE 268

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 74.9 bits (185), Expect = 1e-15
 Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 41/214 (19%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
            G+  ++TGA SGIG   A   A+  A V+   R+     + ++++  E+ D  G    +
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAV 84

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGH 170
             +LA  +   N A+ +     ++ VL+NNAG+    P +E   +   +     +N    
Sbjct: 85  VADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEE--VSLGRWREVLTVNLDAA 141

Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGT---IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
           ++L+             G++++  G+   +   ++   +G    G +  AY  SK     
Sbjct: 142 WVLSRS----------FGTAMLAHGSGRIVTIASMLSFQG----GRNVAAYAASK----- 182

Query: 228 FGAELYL------KYADKGVDVSVVCPGWCYTNL 255
             A + L      ++A +GV V+ + PG+  T  
Sbjct: 183 -HAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 47/224 (20%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSM------IRGQEALEKLKKEVQ 105
           +EGKV  ITGA  G G   A  LA+  A ++    C+ +      +   + L +  ++V+
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTKEGYE 160
               +I+  ++++  FD+++    + + Q  ++ +++ NA ++     +       + + 
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR--MDPKTWR 143

Query: 161 VHFGINHVGHFLLTNLLIERIQK------VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS 214
               +N  G ++   + I  I        +V   S            + G +G    G+ 
Sbjct: 144 DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS------------IGGLRGAENIGN- 190

Query: 215 NPAYCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
              Y  SK     LM       + L+   + + V++VCP    T
Sbjct: 191 ---YIASKHGLHGLMR-----TMALELGPRNIRVNIVCPSSVAT 226

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + GK  +ITGA+SGIG   A+ L KL + V++   +    +E L+ L   ++     +  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN----EEKLKSLGNALK-DNYTIEV 66

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            NLA+ +   N     + +   + +L+ NAG+
Sbjct: 67  CNLANKEECSNL----ISKTSNLDILVCNAGI 94

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 13/94 (13%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           +    +  ++TG N GIG   A+  A     V +  RS     E  E           + 
Sbjct: 17  RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS----GEPPEG---------FLA 63

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           ++ ++   + ++   K + + +  + VLI NAGV
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 73.7 bits (182), Expect = 3e-15
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 13/93 (13%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           P   +  ++TG N GIG   A+ LA     V +  R                    +  +
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGV 58

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
           E+++   D++      V +    + VL++NAG+
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 73.4 bits (181), Expect = 4e-15
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 8/89 (8%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
              I+T      G  +A  L++   TV     S     +  ++L+   +       +L  
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDES----FKQKDELEAFAETY----PQLKP 53

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            S        + V   Y ++ VL++N   
Sbjct: 54  MSEQEPAELIEAVTSAYGQVDVLVSNDIF 82

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 40/222 (18%)

Query: 49  PFYKP---MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ 105
           P YK    ++GK  +ITG +SGIG   +   AK  A + +        +    + K+ V+
Sbjct: 37  PNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD---EEGDANETKQYVE 93

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYEV 161
               + VL+  +L+     K+  +  ++Q   +++L+NN     P +  E +T ++  E 
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQ-LEK 152

Query: 162 HFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNS 221
            F IN   +F +T   +  +++    G  +++  +I        +G            N 
Sbjct: 153 TFRINIFSYFHVTKAALSHLKQ----GDVIINTASI-----VAYEG------------NE 191

Query: 222 KLMNY--------YFGAELYLKYADKGVDVSVVCPGWCYTNL 255
            L++Y         F   L      KG+ V+ V PG  +T L
Sbjct: 192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 73.4 bits (181), Expect = 6e-15
 Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 51/233 (21%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSM----------IRGQEALEKLK 101
           +EGKV  +TGA  G G   A  LA+  A ++    C+ +              E L +  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 102 KEVQD--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVS---VPIKEKLTTK 156
             V+    +IV  E+++  +D++K    + ++Q  ++ +++ NAG+      + +  T++
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK--TSE 126

Query: 157 EGYEVHFGINHVGHFLLTNLLIERIQK------VVIVGSSLMDRGTIDFDNLNGEKGFVQ 210
           E +     IN  G +      +  +        +++  S            + G K +  
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS------------VGGLKAYPH 174

Query: 211 KGHSNPAYCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
            GH    Y  +K     LM  +      ++     + V+ V P    T +  +
Sbjct: 175 TGH----YVAAKHGVVGLMRAF--G---VELGQHMIRVNSVHPTHVKTPMLHN 218

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 49  PFYKP---MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ 105
             Y     ++ +  ++TG +SGIG   A   A+  A V +        +E  +++K  ++
Sbjct: 39  KSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP--AEEEDAQQVKALIE 96

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYEV 161
           +   + VL+  +L+     ++      +    + +L   AG    I   + LT+ E ++ 
Sbjct: 97  ECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTS-EQFQQ 155

Query: 162 HFGINHVGHFLLT 174
            F +N    F +T
Sbjct: 156 TFAVNVFALFWIT 168

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 22/210 (10%), Positives = 49/210 (23%), Gaps = 32/210 (15%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           M     I+ G    +G    +   K   TV+    S     +  +          +V   
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS---ANDQAD-------SNILVDGN 50

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVGHFL 172
            N    +           Q  ++  +   AG             +  ++    +     +
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 173 LTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYY 227
              L    ++    + + G++                       S   Y  +K  + +  
Sbjct: 111 AAKLATTHLKPGGLLQLTGAAAAMGP----------------TPSMIGYGMAKAAVHHLT 154

Query: 228 FGAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                          V  + P    T + R
Sbjct: 155 SSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 184

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 42/221 (19%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLG--CRSM------IRGQEALEKLKKEVQ 105
           ++GKV  ITGA  G G   A  LA+  A +V    CR            E L++  + V+
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHF 163
           +   +I+  + ++    S++      + ++  I +L++N G+S   +    T + +    
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163

Query: 164 GINHVGHFLLTN----LLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA 217
             N +G +         +IER Q   V+ V S              G +G    G S+  
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGSVIFVSS------------TVGLRG--APGQSH-- 207

Query: 218 YCNSK-----LMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
           Y  SK     LM      E+        + V+ V PG   T
Sbjct: 208 YAASKHGVQGLML-SLANEV----GRHNIRVNSVNPGAVNT 243

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 71.0 bits (175), Expect = 3e-14
 Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 15/123 (12%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
            + ++T A    G    + L +   TVV    S     +A E+ + E ++          
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDAS---FADAAERQRFESENPG-----TIA 53

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVS-----VPIKEKLTTKEGYEVHFGINHVGHF 171
            +    +      ++    I  +++N  +      +P++   T++      F    +   
Sbjct: 54  LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEG--TSEADIRQMFEALSIFPI 111

Query: 172 LLT 174
           LL 
Sbjct: 112 LLL 114

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 52  KPM--EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI 109
             M     V ++TG  SG+G  T K L    A VV+     IRG++ +  L       + 
Sbjct: 3   GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVV---LDIRGEDVVADL-----GDRA 54

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI----KEKLTTKEGYEVHFGI 165
                ++    ++ + A ++ +    + +++N AG    I    ++ + +   +     I
Sbjct: 55  RFAAADVTDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113

Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTI 197
           N VG F +  L  ERI K   VG +  +RG I
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVI 145

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 72.0 bits (177), Expect = 3e-14
 Identities = 42/211 (19%), Positives = 75/211 (35%), Gaps = 45/211 (21%)

Query: 57  KVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIRGQEALEKLKKEVQDGQIVLM- 112
            V +ITG +SGIG   A  LA   +    V    R +       E  +        +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGH 170
           +L++    S+    + V +   ++ VL+ NAG+ +  P++     ++       +N VG 
Sbjct: 63  QLDVRDSKSVAAARERVTEG--RVDVLVCNAGLGLLGPLEA--LGEDAVASVLDVNVVGT 118

Query: 171 FLLTNLLIE--RIQK--VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AYCNSKL 223
             +    +   + +    V+V  S+               G +      P    YC SK 
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVG--------------GLM----GLPFNDVYCASK- 159

Query: 224 MNYYFGAE-----LYLKYADKGVDVSVVCPG 249
               F  E     L +     GV +S++  G
Sbjct: 160 ----FALEGLCESLAVLLLPFGVHLSLIECG 186

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 22/209 (10%), Positives = 56/209 (26%), Gaps = 32/209 (15%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           E +  ++ G    +G    +        V          +EA   +  ++ D        
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV--ENEEASASVIVKMTDS------- 56

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLL 173
                D +      ++    K+  ++  AG       K  +  +  ++ +  +     + 
Sbjct: 57  FTEQADQVTAEVGKLL-GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 174 TNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LMNYYF 228
           ++L  + +++   + + G+                 G          Y  +K  +     
Sbjct: 116 SHLATKHLKEGGLLTLAGA------------KAALDGTPGMI----GYGMAKGAVHQLCQ 159

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFR 257
                      G     V P    T + R
Sbjct: 160 SLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 70.3 bits (173), Expect = 5e-14
 Identities = 51/243 (20%), Positives = 79/243 (32%), Gaps = 58/243 (23%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
            V  ITG+ SGIG    + LA+   TV+   R     +  L         G+   +   L
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTP-----GGRETAVAAVL 56

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
                +             +  L+  AGV V       T     +   +N+ G   L + 
Sbjct: 57  DRCGGV-------------LDGLVCCAGVGV-------TAANSGLVVAVNYFGVSALLDG 96

Query: 177 LIERI-----QKVVIVGSS------------LMDRGTIDFDNLNGEKGFVQKGHSNPAYC 219
           L E +        VIVGS             +      D             G ++ AY 
Sbjct: 97  LAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQ--GQTHLAYA 154

Query: 220 NSKLMNYYFGA------ELYLKYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQKVMIFP 271
            SK       A         + +A +GV ++VV PG   T L +   AD ++ +    F 
Sbjct: 155 GSK------YAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV 208

Query: 272 IAM 274
             +
Sbjct: 209 APL 211

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 68/210 (32%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
               ++ GA+  +G    + L K KA V+   R        +                ++
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITAGRH----SGDV---------------TVD 42

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHFLL 173
           + + DSIK       +Q  K+  +++  G +   P+ E   T E   V       G   L
Sbjct: 43  ITNIDSIKKMY----EQVGKVDAIVSATGSATFSPLTE--LTPEKNAVTISSKLGGQINL 96

Query: 174 TNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
             L I+ +       +    +M+                    +  +   +       GA
Sbjct: 97  VLLGIDSLNDKGSFTLTTGIMMEDPI--------------VQGA--SAAMAN------GA 134

Query: 231 ----------ELYLKYADKGVDVSVVCPGW 250
                     E+      +G+ ++ V P  
Sbjct: 135 VTAFAKSAAIEM-----PRGIRINTVSPNV 159

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 21/154 (13%), Positives = 36/154 (23%), Gaps = 37/154 (24%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--------- 105
              V ++TGA   +G   A+ L      V L              L   +          
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR---SAAEANALSATLNARRPNSAIT 64

Query: 106 -----------DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP------ 148
                                +  F             + +  VL+NNA    P      
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 149 --------IKEKLTTKEGYEVHFGINHVGHFLLT 174
                   + ++   +      FG N +  + L 
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLI 158

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 21/154 (13%), Positives = 36/154 (23%), Gaps = 37/154 (24%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--------- 105
              V ++TGA   +G   A+ L      V L              L   +          
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR---SAAEANALSATLNARRPNSAIT 101

Query: 106 -----------DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP------ 148
                                +  F             + +  VL+NNA    P      
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 149 --------IKEKLTTKEGYEVHFGINHVGHFLLT 174
                   + ++   +      FG N +  + L 
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLI 195

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 68.3 bits (168), Expect = 3e-13
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 10/102 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVL--GCRSMIRGQ------EALEKLKKEVQ 105
            EGK  +ITG   G+G   A  LA+  A + +   C +           + L +    V+
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 106 D--GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
               + +  ++++    ++++F          I + I NAG+
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI 109

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 67.3 bits (165), Expect = 7e-13
 Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 44/214 (20%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           KV ++TGA+SG G   A+       TV+   R      EAL+ L     D    +  L++
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT----EALDDLVAAYPDRAEAI-SLDV 60

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLT 174
              + I   A +V+ +Y ++ VL+NNAG +     +E  TT+      F ++  G   LT
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE--TTERELRDLFELHVFGPARLT 118

Query: 175 NLLIE--RIQKVVIVGSSLMDRGTIDFDNLN-----GEKGFVQKGHSNPAYCNSKLMNYY 227
             L+   R +            G++    +N     G+  F        AY  +K     
Sbjct: 119 RALLPQMRERG----------SGSV----VNISSFGGQLSFAGFS----AYSATK----- 155

Query: 228 FGAE-----LYLKYADKGVDVSVVCPGWCYTNLF 256
              E     L  + A  G+ V +V PG   TNLF
Sbjct: 156 AALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLF 189

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 65.6 bits (161), Expect = 2e-12
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  K  ++  A+ GIG   A  L++  A V +  R+    +E L++         +V   
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN----EELLKRSGHRY----VVC-- 66

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAG 144
                   ++     + ++  ++ +L+ NAG
Sbjct: 67  -------DLRKDLDLLFEKVKEVDILVLNAG 90

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 65.2 bits (160), Expect = 3e-12
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 11/89 (12%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  ++TG + GIG   A+ L      V +  R+     ++L  +                
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTD----------- 51

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
              D  K   K  ++    +HVL++ A V
Sbjct: 52  LEKDDPKGLVKRALEALGGLHVLVHAAAV 80

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRG---QEALEKLKKEVQD- 106
           ++G+V I+TGA  GIG   A   A   A VV   +G            A + +  E+   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 107 -GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGV 145
            G+ V    N+A +D      +  ++ +  + VL+NNAG+
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 62.2 bits (151), Expect = 5e-11
 Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 25/145 (17%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  ++      +G  +A  LA   A VVL  R + + Q A + + K     ++ +  
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTA 173

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINN--AGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
              A   S     K         H +      G+ +  +     +   E+    N     
Sbjct: 174 AETADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGT 196
                         I G    D+G 
Sbjct: 227 -------------GIGGIDATDKGK 238

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 60.3 bits (147), Expect = 9e-11
 Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 54/218 (24%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  ++TG  SG+G   A  L      VV+              L    +   ++ +E ++
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV--------------LDLRREGEDLIYVEGDV 48

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPI----KEKLTTKEGYEVHFGINHVGHFL 172
              + ++       ++   +  +++ AGV +      KE     E +     +N +G F 
Sbjct: 49  TREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 107

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-----GEKGFVQKGHSNPAYCNSKLMNYY 227
           +  L    +++          RG I    +N       +G  Q G +  AY  SK     
Sbjct: 108 VLRLAAWAMRENPPDAEG--QRGVI----VNTASVAAFEG--QIGQA--AYAASK----- 152

Query: 228 FGA----------ELYLKYADKGVDVSVVCPGWCYTNL 255
            G           EL    A  G+ V  V PG   T L
Sbjct: 153 -GGVVALTLPAAREL----AGWGIRVVTVAPGLFDTPL 185

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRG--QEALEKLKKEVQD--G 107
           +G+V ++TGA  G+G   A   A+  A VV   LG      G    A +K+ +E++   G
Sbjct: 8   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG 67

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           + V    N  S ++ +   K  +  + +I V++NNAG+         + E +++   ++ 
Sbjct: 68  KAV---ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 124

Query: 168 VGHFLLT 174
            G F +T
Sbjct: 125 RGSFQVT 131

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 16/130 (12%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRG--QEALEKLKKEVQD--G 107
           + KV IITGA  G+G   + E AKL A VV   LG     +G   +A + +  E+    G
Sbjct: 7   KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG 66

Query: 108 QIVLMELNLASFDSIKNFAKNV---MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFG 164
             V      A ++++ +  K V   +K +  +HV+INNAG+      K  T++ Y++   
Sbjct: 67  VAV------ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVID 120

Query: 165 INHVGHFLLT 174
           ++  G F +T
Sbjct: 121 VHLNGAFAVT 130

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 24/138 (17%)

Query: 46  KASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRGQEALEKLKK 102
            +      ++ KV +ITGA +G+G E AK  AK  A VV                 K   
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK---------DATKTVD 362

Query: 103 EVQD--GQIVLMELNLASFDSIKNFAKNVMKQ----YPKIHVLINNAGVSVPIKEKLTTK 156
           E++   G+             +   ++ ++K     Y  I +L+NNAG+         +K
Sbjct: 363 EIKAAGGEAW------PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSK 416

Query: 157 EGYEVHFGINHVGHFLLT 174
           + ++    ++ +G F L+
Sbjct: 417 QEWDSVQQVHLIGTFNLS 434

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 16/101 (15%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRG--QEALEKLKKEVQD--G 107
           +G+V ++TGA +G+G E A   A+  A VV   LG      G  Q A + +  E++   G
Sbjct: 18  DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG 77

Query: 108 QIVLMELNLASFDSIKNFAKNV---MKQYPKIHVLINNAGV 145
           + V      A ++S+ + AK +   +K + ++ +L+NNAG+
Sbjct: 78  EAV------ADYNSVIDGAKVIETAIKAFGRVDILVNNAGI 112

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 28/214 (13%), Positives = 62/214 (28%), Gaps = 40/214 (18%)

Query: 47  ASPFYKPMEG-KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ 105
             P  +P    K  +  GA   +G+  A+ +      +      + R    +++L     
Sbjct: 4   EQPLSRPGAHVKYAV-LGATGLLGHHAARAIRAAGHDL----VLIHRPSSQIQRLA---- 54

Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
             +       +     ++   + +         +I +AG   P + +      ++     
Sbjct: 55  YLEPECRVAEMLDHAGLERALRGL-------DGVIFSAGY-YPSRPR-----RWQEEVAS 101

Query: 166 NHVGHFLLTNLLIE-----RIQKVVIVGS-SLMDRGTIDFDNLNGEKGFVQKGHSNPAYC 219
                   TN         R+ +++ VGS   M R        +    +        +Y 
Sbjct: 102 ALGQ----TNPFYAACLQARVPRILYVGSAYAMPRHP-QGLPGHEGLFYDSLPSGKSSYV 156

Query: 220 NSKLMNYYFGAELY-LKYADKGVDVSVVCPGWCY 252
             K        +    + A  G+ V +  PG   
Sbjct: 157 LCKWA-----LDEQAREQARNGLPVVIGIPGMVL 185

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 53/466 (11%), Positives = 112/466 (24%), Gaps = 168/466 (36%)

Query: 1   MLTNILSFFRDNDK-LLLHSLLYTTTITLSALVISRYFKSRS-----------WSK--LK 46
           ML  +L     N      HS      I      + R  KS+             +     
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 47  ASPFYKPMEGKVC--IITGANSGI-------------------GY---ETAKELAKLKAT 82
           A           C  ++T     +                        E    L K    
Sbjct: 261 A------FNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK---- 309

Query: 83  VVLGCRSMIRGQEALEKLKKEVQDG-----------------------QIVLMELNLASF 119
             L CR         + L +EV                           +   +L     
Sbjct: 310 -YLDCR--------PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 120 DSIKNFAKNVMKQ-YPKIHVLINNAGVSVPIKEKL-----TTKEGYEVHFGINHVGHFLL 173
            S+        ++ + ++ V   +      I   L           +V   +N     L 
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPS----AHIPTILLSLIWFDVIKSDVMVVVNK----LH 412

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFD---NLNGE----KGFVQKGHSNPAYCNSKLM-- 224
              L+E+  K   +  S+     I  +    L  E    +  V   +    + +  L+  
Sbjct: 413 KYSLVEKQPKESTI--SIPS---IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467

Query: 225 ---NYYFGAELYLKY-------ADKGVDVSVVCPGWCYTNLFRHA--DIKFYQKVMIFPI 272
               Y++    ++ +        ++               LFR    D +F ++ +    
Sbjct: 468 YLDQYFY---SHIGHHLKNIEHPER-------------MTLFRMVFLDFRFLEQKIRH-- 509

Query: 273 AMMVVIVGSSLMDRGTI--DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD 330
                   ++    G+I      L   K ++           + ++++    E       
Sbjct: 510 ------DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE------- 556

Query: 331 KGVDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQLE 376
                          NL         +  ++     ++  +  Q++
Sbjct: 557 --------------ENLICSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 16/90 (17%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 54  MEGKVCIITG-AN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
           +EG+  ++ G AN  S I +  A+ L +  A ++       R ++++ +L   +     +
Sbjct: 5   LEGRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGE-RLEKSVHELAGTLDRNDSI 62

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLI 140
           ++  ++ +   I+    ++ +Q   IH + 
Sbjct: 63  ILPCDVTNDAEIETCFASIKEQVGVIHGIA 92

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.98
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.98
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.96
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.86
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.85
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.84
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.84
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.84
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.83
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.83
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.83
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.83
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.83
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.83
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.82
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.82
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.82
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.81
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.81
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.81
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.81
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.81
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.81
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.8
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.8
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.8
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.79
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.79
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.79
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.78
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.78
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.78
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.78
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.78
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.78
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.78
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.78
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.77
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.77
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.76
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.76
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.76
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.74
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.74
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.73
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.73
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.73
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.71
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.69
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.68
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.68
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.64
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.63
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.62
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.6
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.59
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.58
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.56
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.56
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.54
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.52
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.52
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.49
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.49
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.47
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.46
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.43
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.41
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.22
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.15
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.09
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.95
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.8
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.79
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.7
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.69
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.68
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.61
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.58
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.57
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.47
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.41
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.38
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.34
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.33
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.32
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.32
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.29
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.27
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.25
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.24
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.2
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.2
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.15
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.14
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.11
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.07
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.07
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.04
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.01
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.01
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.97
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.96
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.92
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.91
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.91
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.87
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.86
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.83
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.83
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.82
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.81
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.81
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.79
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.79
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.78
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.77
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.76
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.75
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.75
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.75
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.74
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.74
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.73
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.72
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.71
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.7
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.7
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.68
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.67
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.67
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.66
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.66
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.65
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.65
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.64
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.64
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.64
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.64
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.62
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.62
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.61
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.61
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.61
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.6
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.59
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.59
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.55
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.55
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.54
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.54
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.54
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.54
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.53
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.53
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.53
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.53
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.52
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.51
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.51
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.51
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.51
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.5
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.5
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.5
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.49
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.48
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.46
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.46
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.45
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.45
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.45
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.45
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.45
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.43
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.42
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.42
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.41
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.41
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.41
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.4
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.4
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.39
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.39
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	97.39
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.38
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.38
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.37
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.36
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.36
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.36
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.36
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.35
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.35
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.35
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.35
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.35
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.34
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.34
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.33
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.33
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.33
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.32
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.31
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.31
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.3
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.3
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.3
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.29
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.29
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.28
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.27
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.27
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.27
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.27
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.26
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.26
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.25
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.24
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.24
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.23
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.23
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.22
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.22
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.21
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.21
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.2
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.19
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.17
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.17
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.16
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.16
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.15
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.15
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.15
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.13
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.13
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.13

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.3e-46  Score=338.45  Aligned_cols=224  Identities=22%  Similarity=0.277  Sum_probs=194.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++++.  +.++.+++||++|+++++++++++.
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999988765  5789999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +++|+||+||||||+... .++.+.++|+|++++++|+.|+|+++|+++|+|+     +||++||.++..+.+       
T Consensus        80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~-------  152 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF-------  152 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS-------
T ss_pred             HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC-------
Confidence            999999999999998654 6788999999999999999999999999999986     699999999988766       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc---hHHHHHHH-------------
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD---IKFYQKVM-------------  268 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~-------------  268 (384)
                               +..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.....   +...+...             
T Consensus       153 ---------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pe  223 (254)
T 4fn4_A          153 ---------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE  223 (254)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHH
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHH
Confidence                     77899999999999999999999999999999999999999975432   11111111             


Q ss_pred             -HHHHHHHHHhhccccccccccccc
Q psy2854         269 -IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 -~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       +.....|+++..++++++..+..|
T Consensus       224 diA~~v~fLaSd~a~~iTG~~i~VD  248 (254)
T 4fn4_A          224 DIANVIVFLASDEASFVNGDAVVVD  248 (254)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEeC
Confidence             111336667777777787776554

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.5e-46  Score=334.04  Aligned_cols=222  Identities=18%  Similarity=0.235  Sum_probs=194.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..++||++|+++++++++++.++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999888775  568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+....++.+.++|+|++++++|+.|+++++|+++|+|.      +||++||..+..+.+         
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~---------  154 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP---------  154 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT---------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC---------
Confidence            99999999999998889999999999999999999999999999999983      699999999887766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch-HHHHHHHH--------------HH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI-KFYQKVMI--------------FP  271 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~--------------~~  271 (384)
                             +..+|++||+|+.+|+++++.|++++|||||+|+||+|+|+|.+.... +...+.+.              ..
T Consensus       155 -------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~  227 (255)
T 4g81_D          155 -------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIG  227 (255)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHH
Confidence                   778999999999999999999999999999999999999999865321 12222111              11


Q ss_pred             HHHHHHhhccccccccccccc
Q psy2854         272 IAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       272 ~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ...|+++..++++++..+..|
T Consensus       228 ~v~fL~S~~a~~iTG~~i~VD  248 (255)
T 4g81_D          228 TAIFLSSKASDYINGQIIYVD  248 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhCCCcCCEEEEC
Confidence            335666666777777766543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=6e-45  Score=330.67  Aligned_cols=220  Identities=23%  Similarity=0.296  Sum_probs=186.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.+...++||++|+++++++++++.+
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999988887776665     46788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++|+||+||||||+....++.+.++|+|++++++|+.|+++++|+++|+|+   +||++||..+..+.+           
T Consensus       100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~-----------  168 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP-----------  168 (273)
T ss_dssp             HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT-----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC-----------
Confidence            999999999999998888999999999999999999999999999999997   699999999887766           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch-------HHHHHH-------------H
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI-------KFYQKV-------------M  268 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-------~~~~~~-------------~  268 (384)
                           ...+|++||+|+.+|+++++.|++++|||||+|+||+|+|++......       .+.+..             -
T Consensus       169 -----~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  243 (273)
T 4fgs_A          169 -----AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEE  243 (273)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHH
Confidence                 778999999999999999999999999999999999999998765421       111111             0


Q ss_pred             HHHHHHHHHhhccccccccccccc
Q psy2854         269 IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 ~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      +.....||++..++++++..+..|
T Consensus       244 iA~~v~FLaSd~a~~iTG~~i~VD  267 (273)
T 4fgs_A          244 VAAAALFLASDDSSFVTGAELFVD  267 (273)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCchhcCccCCeEeEC
Confidence            111335667777777787776554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2e-43  Score=319.10  Aligned_cols=221  Identities=21%  Similarity=0.280  Sum_probs=184.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.  +.++.+++||++|+++++++++++.+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999987644 44555554  56889999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++|++|+||||||+....+ .+.+.|+|++++++|+.++++++|+++|+|+    +||++||..+..+.+          
T Consensus        80 ~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------  148 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG----------  148 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS----------
T ss_pred             HhCCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC----------
Confidence            9999999999999865444 4679999999999999999999999999996    699999999887766          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch------HHHHHH--------------
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI------KFYQKV--------------  267 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~~~--------------  267 (384)
                            +..+|++||+|+.+|+|+++.|++++|||||+|+||+|+|+|.+....      ...++.              
T Consensus       149 ------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe  222 (258)
T 4gkb_A          149 ------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD  222 (258)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH
Confidence                  778999999999999999999999999999999999999999865321      111111              


Q ss_pred             HHHHHHHHHHhhccccccccccccc
Q psy2854         268 MIFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       268 ~~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      -+.....|+++..++++++..+..|
T Consensus       223 eiA~~v~fLaS~~a~~iTG~~i~VD  247 (258)
T 4gkb_A          223 EIADTAVFLLSPRASHTTGEWLFVD  247 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhcCccCCeEEEC
Confidence            1122335666777777787776553

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-43  Score=316.60  Aligned_cols=215  Identities=24%  Similarity=0.325  Sum_probs=181.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.  +.++..++||++|+++++++++     
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST-----
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH-----
Confidence            689999999999999999999999999999999999864  4455555554  5789999999999998887663     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+....++.+.++++|++++++|+.|+|+++|+++|+|.      +||++||..+..+.+         
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~---------  147 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI---------  147 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS---------
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC---------
Confidence            58999999999998888999999999999999999999999999999983      699999999888766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH-------------HHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM-------------IFP  271 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~-------------~~~  271 (384)
                             +.++|++||+|+.+|+|+++.|++++|||||+|+||+|+|||.+...  +...+...             +..
T Consensus       148 -------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~  220 (247)
T 4hp8_A          148 -------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAG  220 (247)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHH
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHH
Confidence                   77899999999999999999999999999999999999999986532  12212111             122


Q ss_pred             HHHHHHhhccccccccccccc
Q psy2854         272 IAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       272 ~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ...||++..++++++..+..|
T Consensus       221 ~v~fLaSd~a~~iTG~~i~VD  241 (247)
T 4hp8_A          221 AAVFLSSAAADYVHGAILNVD  241 (247)
T ss_dssp             HHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhcCCcCCeEEEC
Confidence            346667777777787766553

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.3e-42  Score=311.05  Aligned_cols=212  Identities=17%  Similarity=0.217  Sum_probs=179.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+||||||++|||+++|++|+++|++|++++|+++++++..    ++  ..++.+++||++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            489999999999999999999999999999999976554433    33  457889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      +|+||||||+....++.+.+.|+|++++++|+.|+++++|+++|+|+    +||++||..+..+.+              
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~--------------  141 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP--------------  141 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT--------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC--------------
Confidence            99999999998888999999999999999999999999999999986    799999999887766              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHH---------HHHHHHHHHHhhccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV---------MIFPIAMMVVIVGSS  282 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~~~~~~~s~s~  282 (384)
                        ...+|++||+|+.+|+|+++.|+++ |||||+|+||+++|++.+....+...+.         -+.....||++  ++
T Consensus       142 --~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s--~~  216 (247)
T 3ged_A          142 --DSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQ--QD  216 (247)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHH--CS
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHh--CC
Confidence              7789999999999999999999987 9999999999999999876654332221         11223355553  45


Q ss_pred             cccccccccc
Q psy2854         283 LMDRGTIDFD  292 (384)
Q Consensus       283 ~~~~~~i~f~  292 (384)
                      ++++..+..|
T Consensus       217 ~iTG~~i~VD  226 (247)
T 3ged_A          217 FITGETIIVD  226 (247)
T ss_dssp             SCCSCEEEES
T ss_pred             CCCCCeEEEC
Confidence            7787777654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.5e-42  Score=308.49  Aligned_cols=209  Identities=23%  Similarity=0.340  Sum_probs=172.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++.        ...++..++||++|+++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            5899999999999999999999999999999999997665431        24678999999999999887764    57


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      |++|+||||||+..  +..+.+.++|++++++|+.|+++++|+++|+|+    +||++||..+..+.+            
T Consensus        77 g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~------------  142 (242)
T 4b79_A           77 PRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA------------  142 (242)
T ss_dssp             SCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS------------
T ss_pred             CCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC------------
Confidence            99999999999853  566789999999999999999999999999996    799999999888766            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH-------------HHHHHH
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM-------------IFPIAM  274 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~-------------~~~~~~  274 (384)
                          +.++|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...  ++..++..             +.....
T Consensus       143 ----~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~  218 (242)
T 4b79_A          143 ----DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAA  218 (242)
T ss_dssp             ----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                77899999999999999999999999999999999999999987643  22222221             112335


Q ss_pred             HHHhhccccccccccccc
Q psy2854         275 MVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       275 ~~~~s~s~~~~~~~i~f~  292 (384)
                      ||++..++++++..+..|
T Consensus       219 fLaSd~a~~iTG~~l~VD  236 (242)
T 4b79_A          219 FLCGPGASFVTGAVLAVD  236 (242)
T ss_dssp             HHTSGGGTTCCSCEEEES
T ss_pred             HHhCchhcCccCceEEEC
Confidence            666777777787766543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.5e-40  Score=301.78  Aligned_cols=224  Identities=16%  Similarity=0.096  Sum_probs=189.2

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||++|||||+|  |||+++|++|+++|++|++++|+.+.+++..+++.+. ++.++.+++||++|+++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999875  9999999999999999999999988888776666543 3567899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++.+.|.++   +||++||..+..+.+     
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~-----  155 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ-----  155 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT-----
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc-----
Confidence            9999999999999998643    2455678899999999999999999999999887   799999999887765     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH------------
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM------------  268 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~------------  268 (384)
                                 +...|++||+|+.+|+++|+.|++++|||||+|+||+++|++.+...  ++..++..            
T Consensus       156 -----------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  224 (256)
T 4fs3_A          156 -----------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV  224 (256)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -----------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH
Confidence                       77899999999999999999999999999999999999999987654  22222221            


Q ss_pred             -HHHHHHHHHhhccccccccccccc
Q psy2854         269 -IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 -~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       +.....|+++..++++++..+..|
T Consensus       225 evA~~v~fL~Sd~a~~iTG~~i~VD  249 (256)
T 4fs3_A          225 EVGKTAAYLLSDLSSGVTGENIHVD  249 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhcCccCCEEEEC
Confidence             112335667767777787776553

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3.6e-41  Score=305.32  Aligned_cols=180  Identities=21%  Similarity=0.234  Sum_probs=161.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.            ..+..++++|++|+++++++++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999985421            12344689999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||+...  .++.+.++|+|++++++|+.|+++++|+++|+|+     +||++||..+..+.+.      
T Consensus        75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~------  148 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE------  148 (261)
T ss_dssp             HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred             HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC------
Confidence            99999999999998543  4778899999999999999999999999999996     6999999988766541      


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+.
T Consensus       149 ---------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          149 ---------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence                     567899999999999999999999999999999999999998654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.7e-39  Score=295.34  Aligned_cols=191  Identities=19%  Similarity=0.234  Sum_probs=177.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.+++||++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999988888887765555699999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+         
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  154 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP---------  154 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC---------
Confidence            999999999999998788888899999999999999999999999999986     599999998887665         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       155 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  199 (265)
T 3lf2_A          155 -------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRR  199 (265)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhh
Confidence                   778999999999999999999999999999999999999998653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-39  Score=293.17  Aligned_cols=224  Identities=19%  Similarity=0.257  Sum_probs=189.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +..++.++++|++|+++++++++++.+
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-SSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999998888888887654 236899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc-cCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD-RGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~-~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+. .+.+        
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  156 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP--------  156 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT--------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--------
Confidence            999999999999998778888899999999999999999999999999974     79999998875 4433        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPI  272 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~  272 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+++.....             ....
T Consensus       157 --------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  228 (262)
T 3pk0_A          157 --------GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHL  228 (262)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             --------CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                    6789999999999999999999999999999999999999987665544333221             1112


Q ss_pred             HHHHHhhccccccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ..+++...+...++..+..|
T Consensus       229 v~~L~s~~~~~itG~~i~vd  248 (262)
T 3pk0_A          229 AAFLATKEAGYITGQAIAVD  248 (262)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhCccccCCcCCEEEEC
Confidence            24555555566666555443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.7e-39  Score=290.82  Aligned_cols=190  Identities=25%  Similarity=0.335  Sum_probs=173.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.     .+...+++|++|+++++++++++.+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999877776666552     3577899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+         
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  150 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA---------  150 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC---------
Confidence            999999999999998778888889999999999999999999999999884     699999998877665         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+....+
T Consensus       151 -------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~  199 (248)
T 3op4_A          151 -------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE  199 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH
Confidence                   7789999999999999999999999999999999999999998776543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.3e-39  Score=293.18  Aligned_cols=189  Identities=23%  Similarity=0.309  Sum_probs=174.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999998888888877654  56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++ +.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+         
T Consensus        86 ~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  155 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV---------  155 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC---------
Confidence            99999999999999777777 779999999999999999999999999985     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       156 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          156 -------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence                   6789999999999999999999999999999999999999987543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=5e-39  Score=290.46  Aligned_cols=188  Identities=20%  Similarity=0.264  Sum_probs=172.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999987777666554     46789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+      +||++||..+..+.+        
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  148 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP--------  148 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT--------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC--------
Confidence            999999999999998777888889999999999999999999999999884      699999998877665        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       149 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  195 (247)
T 3rwb_A          149 --------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP  195 (247)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG
T ss_pred             --------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC
Confidence                    77899999999999999999999999999999999999999876543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-38  Score=292.16  Aligned_cols=190  Identities=17%  Similarity=0.260  Sum_probs=176.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888888888654  56789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~---------  170 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA---------  170 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT---------
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC---------
Confidence            999999999999998788888889999999999999999999999999984     799999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       171 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (271)
T 4ibo_A          171 -------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL  216 (271)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence                   6789999999999999999999999999999999999999997643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.3e-38  Score=291.48  Aligned_cols=192  Identities=21%  Similarity=0.291  Sum_probs=176.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++..+++|++|+++++++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888888877665  46788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.     +||++||..+..+.+         
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  172 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP---------  172 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC---------
Confidence            999999999999998878888889999999999999999999999999885     599999998877665         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+....
T Consensus       173 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~  220 (270)
T 3ftp_A          173 -------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ  220 (270)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH
Confidence                   778999999999999999999999999999999999999999766543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-38  Score=292.78  Aligned_cols=190  Identities=24%  Similarity=0.319  Sum_probs=170.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888877777543  56889999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc--CCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR--GTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~--~~~~~~~~~  203 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..  +.+      
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~------  175 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTP------  175 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCST------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCC------
Confidence            99999999999998644 6788889999999999999999999999999985     699999988765  333      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus       176 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          176 ----------GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence                      6789999999999999999999999999999999999999997653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.7e-38  Score=290.03  Aligned_cols=191  Identities=22%  Similarity=0.290  Sum_probs=165.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999987776665443     46799999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+         
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------  168 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP---------  168 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----------------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC---------
Confidence            999999999999998777888889999999999999999999999999884     799999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF  263 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  263 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...++.
T Consensus       169 -------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~  218 (266)
T 3grp_A          169 -------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQ  218 (266)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHH
Confidence                   77899999999999999999999999999999999999999987665443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.6e-38  Score=290.31  Aligned_cols=190  Identities=24%  Similarity=0.327  Sum_probs=175.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888876643 56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+..+.+        
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  166 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP--------  166 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC--------
Confidence            999999999999998888888889999999999999999999999999874      699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       167 --------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  211 (266)
T 4egf_A          167 --------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQR  211 (266)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHH
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhh
Confidence                    678999999999999999999999999999999999999998654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.9e-38  Score=293.39  Aligned_cols=225  Identities=19%  Similarity=0.241  Sum_probs=190.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +..++.+++||++|+++++++++++.
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL-GAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS-SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999988888877553 22578999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc-cCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD-RGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~-~~~~~~~~~~~  204 (384)
                      +++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+. .+.+       
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~-------  187 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP-------  187 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCT-------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCC-------
Confidence            9999999999999998778888899999999999999999999999999885     79999998875 4443       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHH
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFP  271 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~  271 (384)
                               +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+....++.....             ...
T Consensus       188 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  258 (293)
T 3rih_A          188 ---------GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGH  258 (293)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                     6789999999999999999999999999999999999999987665544333221             111


Q ss_pred             HHHHHHhhccccccccccccc
Q psy2854         272 IAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       272 ~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ...+++...++.+++..+..|
T Consensus       259 ~v~fL~s~~a~~itG~~i~vd  279 (293)
T 3rih_A          259 LAAFLATDEAGYITGQAIVVD  279 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCccccCCCCCEEEEC
Confidence            234555555566666655543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4e-38  Score=289.43  Aligned_cols=189  Identities=21%  Similarity=0.229  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHHHhcCCcEEEEEeecCC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-------------SMIRGQEALEKLKKEVQDGQIVLMELNLAS  118 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~  118 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++...  +.++.++++|++|
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   84 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRD   84 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            4688999999999999999999999999999999998             555666666655443  5689999999999


Q ss_pred             HHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCccc
Q psy2854         119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLM  192 (384)
Q Consensus       119 ~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~  192 (384)
                      +++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.      +||++||..+
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            9999999999999999999999999998878888889999999999999999999999999874      6999999988


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       165 ~~~~~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          165 MKMQP----------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             TSCCS----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             CCCCC----------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            77655                678999999999999999999999999999999999999999754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-38  Score=291.15  Aligned_cols=189  Identities=21%  Similarity=0.263  Sum_probs=171.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.  +.++.++++|++|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDR   83 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence            46899999999999999999999999999999999997            44455555555443  56899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR  194 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~  194 (384)
                      ++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.     +||++||..+..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            999999999999999999999999998878888899999999999999999999999999884     699999998877


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       164 ~~~----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          164 ANF----------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             CCC----------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence            655                678999999999999999999999999999999999999999753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.3e-38  Score=285.05  Aligned_cols=186  Identities=23%  Similarity=0.302  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987776665554     35789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+   +||++||..+..+.+           
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  147 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP-----------  147 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT-----------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------
Confidence            999999999999998878888899999999999999999999999999986   799999998877655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       148 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          148 -----GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence                 778999999999999999999999999999999999999998754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.9e-38  Score=287.44  Aligned_cols=190  Identities=19%  Similarity=0.189  Sum_probs=165.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999999999988888765  56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      + |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  150 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS---------  150 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT---------
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC---------
Confidence            9 9999999999998878888889999999999999999999999999985     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEE-EEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDV-SVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v-~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||+|+++|+++++.|++++||+| |+|+||+|+|++.+...
T Consensus       151 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~  198 (252)
T 3h7a_A          151 -------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR  198 (252)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence                   778999999999999999999999999999 99999999999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.3e-38  Score=284.21  Aligned_cols=193  Identities=20%  Similarity=0.278  Sum_probs=173.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +.+|+++||||++|||+++|++|+++|++|++++|+ .++.++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999998874 46666666666553  567899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP----------  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC----------
Confidence            99999999999998778888889999999999999999999999999884     699999998877665          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFY  264 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~  264 (384)
                            +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...+...
T Consensus       150 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~  200 (246)
T 3osu_A          150 ------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELK  200 (246)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHH
T ss_pred             ------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHH
Confidence                  678999999999999999999999999999999999999999877665443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.5e-38  Score=286.69  Aligned_cols=188  Identities=19%  Similarity=0.217  Sum_probs=172.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++|+++||||++|||+++|++|+++|++|+++ +|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999986 89888888777777543  5689999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+           
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------  149 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE-----------  149 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC-----------
Confidence            9999999999997778888889999999999999999999999999985     699999998876654           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                           +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       150 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          150 -----NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             -----CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence                 77899999999999999999999999999999999999999987654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=8.6e-38  Score=290.26  Aligned_cols=189  Identities=20%  Similarity=0.258  Sum_probs=171.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++++|++|+
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDF  101 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            46889999999999999999999999999999999987            56666666666543  56899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCC-CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLM  192 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~  192 (384)
                      ++++++++++.+++|++|+||||||+..... +.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~  181 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG  181 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence            9999999999999999999999999876654 77889999999999999999999999999972      6999999988


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       182 ~~~~~----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          182 LRGAE----------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             TSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             ccCCC----------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence            77655                778999999999999999999999999999999999999999754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.8e-38  Score=288.44  Aligned_cols=189  Identities=19%  Similarity=0.228  Sum_probs=169.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----------------chhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS----------------MIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+                .+++++..+++...  +.++.++++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            46889999999999999999999999999999999987                45555555555433  5689999999


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCC-CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEc
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVG  188 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vs  188 (384)
                      ++|+++++++++++.+++|++|+||||||+..... +.+.+.++|++++++|+.|+++++++++|+|.      +||++|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            99999999999999999999999999999876654 77889999999999999999999999999983      699999


Q ss_pred             CcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         189 SSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       189 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      |..+..+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       165 S~~~~~~~~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          165 SVGGLKAYP----------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             CGGGTSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             chhhccCCC----------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            998877655                678999999999999999999999999999999999999999764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-38  Score=283.58  Aligned_cols=185  Identities=19%  Similarity=0.152  Sum_probs=161.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999988777766655     2368899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      |++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+    +||++||..+..+.+            
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  143 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA------------  143 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS------------
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC------------
Confidence            9999999999997777888889999999999999999999999999986    699999998877665            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                          +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       144 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          144 ----NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc
Confidence                7789999999999999999999999999999999999999997654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-38  Score=290.20  Aligned_cols=189  Identities=22%  Similarity=0.254  Sum_probs=171.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHHHhcCCcEEEEEeecCC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-------------SMIRGQEALEKLKKEVQDGQIVLMELNLAS  118 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~  118 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++.+.  +.++.++++|++|
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRD   88 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCC
Confidence            4689999999999999999999999999999999998             556666666665443  5688999999999


Q ss_pred             HHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCccc
Q psy2854         119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLM  192 (384)
Q Consensus       119 ~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~  192 (384)
                      +++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+      +||++||..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            9999999999999999999999999998878888899999999999999999999999999884      5999999988


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       169 ~~~~~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          169 LKATP----------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             TSCCT----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             ccCCC----------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence            77665                778999999999999999999999999999999999999999754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5.6e-38  Score=288.07  Aligned_cols=192  Identities=20%  Similarity=0.259  Sum_probs=174.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999988888888654  46788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+..+...       
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~-------  178 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP-------  178 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC-------
Confidence            999999999999998778888889999999999999999999999999884      5999999887654321       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             .+...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus       179 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          179 -------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             -------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence                   15678999999999999999999999999999999999999998754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-38  Score=286.08  Aligned_cols=189  Identities=21%  Similarity=0.276  Sum_probs=174.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888887654  56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|+    +||++||..+..+.+         
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  155 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA---------  155 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT---------
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC---------
Confidence            999999999999984 456778889999999999999999999999999885    799999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       156 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          156 -------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH
Confidence                   678999999999999999999999999999999999999998654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-38  Score=288.57  Aligned_cols=188  Identities=22%  Similarity=0.274  Sum_probs=163.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++||+++||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999987 45556666666666543  56789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+   +||++||..+..+.+           
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  170 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------  170 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------
Confidence            999999999999998778888889999999999999999999999999986   799999988776655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +...|++||+|+++|+++++.|++++||+||+|+||+++|++...
T Consensus       171 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          171 -----SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence                 678999999999999999999999999999999999999999754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.3e-37  Score=284.95  Aligned_cols=188  Identities=22%  Similarity=0.362  Sum_probs=168.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++++ .+..++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999997765 44556666666553  5689999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCccc-ccCCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLM-DRGTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~-~~~~~~~~~~~~~~  206 (384)
                      +++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+   +||++||..+ ..+.+         
T Consensus        92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  162 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP---------  162 (270)
T ss_dssp             HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC---------
Confidence            9999999999999998778888899999999999999999999999999987   6999999873 33333         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+
T Consensus       163 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          163 -------KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHH
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence                   67899999999999999999999999999999999999999975

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.2e-38  Score=287.89  Aligned_cols=190  Identities=20%  Similarity=0.348  Sum_probs=172.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+..++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999988 555666666666543  5688999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+        
T Consensus       102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  173 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP--------  173 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT--------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC--------
Confidence            9999999999999998777888889999999999999999999999999885     699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       174 --------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  219 (269)
T 4dmm_A          174 --------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL  219 (269)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc
Confidence                    6789999999999999999999999999999999999999997653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=4.8e-38  Score=289.07  Aligned_cols=188  Identities=21%  Similarity=0.282  Sum_probs=170.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999998888888887654  568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.  |+     +||++||..+..+.+        
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~--------  170 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM--------  170 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT--------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC--------
Confidence            999999999999987788888899999999999999999999999993  43     799999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       171 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          171 --------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH
T ss_pred             --------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH
Confidence                    678999999999999999999999999999999999999998654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1e-37  Score=286.70  Aligned_cols=188  Identities=20%  Similarity=0.286  Sum_probs=173.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999988888888876543 46799999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.     +||++||..+..+.+         
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  172 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA---------  172 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT---------
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC---------
Confidence            999999999999987777888889999999999999999999999999884     799999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus       173 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          173 -------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence                   6789999999999999999999999999999999999999863

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.4e-38  Score=289.91  Aligned_cols=190  Identities=17%  Similarity=0.250  Sum_probs=165.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.   +++++..+++.+.  +.++.++++|++|++++++++++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987653   4455555555443  56899999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+   +||++||..+..+.+        
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~--------  156 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG--------  156 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC--------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC--------
Confidence            999999999999999998888888889999999999999999999999999986   799999998776654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus       157 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  202 (262)
T 3ksu_A          157 --------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ  202 (262)
T ss_dssp             --------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence                    5678999999999999999999999999999999999999987553

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.4e-38  Score=285.85  Aligned_cols=222  Identities=22%  Similarity=0.280  Sum_probs=185.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeec--CCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL--ASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--s~~~~v~~~~~~i  129 (384)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|+  +|.++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999998888888877653 34788899999  9999999999999


Q ss_pred             HHhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+      
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------  160 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA------  160 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT------
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC------
Confidence            999999999999999853 45778889999999999999999999999999984     699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch----H-HHHHHHHHHHHHHHHh
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI----K-FYQKVMIFPIAMMVVI  278 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----~-~~~~~~~~~~~~~~~~  278 (384)
                                +...|++||+|+++|+++++.|+++. |+||+|+||+++|++......    . +....-......+++.
T Consensus       161 ----------~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s  229 (252)
T 3f1l_A          161 ----------NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMG  229 (252)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHS
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcC
Confidence                      67899999999999999999999887 999999999999998543110    0 0000011223455566


Q ss_pred             hcccccccccccc
Q psy2854         279 VGSSLMDRGTIDF  291 (384)
Q Consensus       279 s~s~~~~~~~i~f  291 (384)
                      ..+...++..+..
T Consensus       230 ~~~~~itG~~i~v  242 (252)
T 3f1l_A          230 DDSRRKTGMTFDA  242 (252)
T ss_dssp             GGGTTCCSCEEES
T ss_pred             ccccCCCCCEEEe
Confidence            6666666665544

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-37  Score=284.44  Aligned_cols=185  Identities=24%  Similarity=0.299  Sum_probs=169.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998887776655     45788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||+..  ..++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+       
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------  154 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD-------  154 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS-------
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC-------
Confidence            9999999999999863  34566789999999999999999999999999984     699999998877654       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+
T Consensus       155 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          155 ---------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence                     67899999999999999999999999999999999999999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-37  Score=284.98  Aligned_cols=190  Identities=21%  Similarity=0.299  Sum_probs=170.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++++. ++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            358899999999999999999999999999999987654 5566666666543  5688999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccC-CcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRG-TIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~-~~~~~~~~~~~  206 (384)
                      +++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+ .+         
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~---------  175 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP---------  175 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST---------
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC---------
Confidence            9999999999999998778888899999999999999999999999999986   7999999876544 22         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       176 -------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  221 (271)
T 3v2g_A          176 -------GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD  221 (271)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc
Confidence                   6789999999999999999999999999999999999999997653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=4.6e-38  Score=285.80  Aligned_cols=188  Identities=21%  Similarity=0.261  Sum_probs=171.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988888877776443  46799999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.      +||++||..+..+.+        
T Consensus        80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  151 (257)
T 3imf_A           80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP--------  151 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC--------
Confidence            999999999999998778888899999999999999999999999999982      699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhC-CCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA-DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~-~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++..
T Consensus       152 --------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~  196 (257)
T 3imf_A          152 --------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA  196 (257)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence                    778999999999999999999997 77999999999999999754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-38  Score=287.27  Aligned_cols=192  Identities=23%  Similarity=0.316  Sum_probs=168.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +.++++|+++||||++|||+++|++|+++|++|++++| +.++.++..+++.+. .+.++.++++|++|+++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-CSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 555666666665443 2467899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+       
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  171 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP-------  171 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC-------
Confidence            99999999999999998778888889999999999999999999999999985     599999998877655       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       172 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          172 ---------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence                     6789999999999999999999999999999999999999997653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-37  Score=279.04  Aligned_cols=192  Identities=24%  Similarity=0.375  Sum_probs=176.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888887777654  568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|.     +||++||..+..+.+          
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----------  149 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC----------
Confidence            99999999999998777888889999999999999999999999999874     799999998877655          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                            +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+....+
T Consensus       150 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  198 (247)
T 3lyl_A          150 ------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE  198 (247)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH
T ss_pred             ------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH
Confidence                  6789999999999999999999999999999999999999998876543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.5e-38  Score=287.21  Aligned_cols=191  Identities=21%  Similarity=0.305  Sum_probs=160.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.++.++..+++...  +.++.++++|++|+++++++++++.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999995 666677777776553  5689999999999999999999999


Q ss_pred             HhCCCccEEEECCCC--CCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcC
Q psy2854         131 KQYPKIHVLINNAGV--SVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       131 ~~~g~id~lvnnAG~--~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~  200 (384)
                      +++|++|+||||||+  ....++.+.+.++|++++++|+.|+++++++++|.|.        +||++||..+..+.+   
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---  179 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP---  179 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC---
Confidence            999999999999998  4456778889999999999999999999999999983        699999998877655   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                   +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       180 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  226 (280)
T 4da9_A          180 -------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS  226 (280)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc
Confidence                         67889999999999999999999999999999999999999987553

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.7e-38  Score=290.26  Aligned_cols=186  Identities=22%  Similarity=0.222  Sum_probs=170.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999987777666554     46788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus       100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---------  170 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG---------  170 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC---------
Confidence            999999999999998778888899999999999999999999999999985     599999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       171 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          171 -------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH
Confidence                   778999999999999999999999999999999999999998643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-37  Score=286.12  Aligned_cols=189  Identities=21%  Similarity=0.242  Sum_probs=171.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888877777542  56889999999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc-cCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD-RGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~-~~~~~~~~~~~  204 (384)
                      ++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+. .+.+       
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  154 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA-------  154 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCT-------
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCC-------
Confidence            9999999999999863 46777889999999999999999999999999985     79999998876 3433       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       155 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          155 ---------GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence                     678999999999999999999999999999999999999998654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-37  Score=286.06  Aligned_cols=188  Identities=17%  Similarity=0.191  Sum_probs=172.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999988888887664  56899999999999999999999988


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      . +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus       107 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---------  176 (275)
T 4imr_A          107 I-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS---------  176 (275)
T ss_dssp             H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC---------
Confidence            8 9999999999998778888889999999999999999999999999984     799999998776443         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       177 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          177 -------VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc
Confidence                   667899999999999999999999999999999999999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.7e-38  Score=285.09  Aligned_cols=186  Identities=24%  Similarity=0.335  Sum_probs=165.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999888888887664  5688999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      |++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+           
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~-----------  148 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP-----------  148 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC-----------
Confidence            9999999999998778888899999999999999999999999999984     699999998877655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|++||+|+++|+++++.|+ + ||+||+|+||+|+|++.+..
T Consensus       149 -----~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          149 -----TAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------
T ss_pred             -----CChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccc
Confidence                 77899999999999999999998 4 99999999999999997654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2e-37  Score=281.89  Aligned_cols=187  Identities=22%  Similarity=0.316  Sum_probs=171.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988777766655     45688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+..+.+        
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  150 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA--------  150 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC--------
Confidence            999999999999998778888889999999999999999999999999973      699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       151 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  196 (259)
T 4e6p_A          151 --------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV  196 (259)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence                    6789999999999999999999999999999999999999986543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.3e-38  Score=284.80  Aligned_cols=189  Identities=21%  Similarity=0.341  Sum_probs=167.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++ .++.++++|++|+++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999888888776434 6789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++ +.+.++|++++++|+.|++.++++++|.|+     +||++||..+..+.+         
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  153 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA---------  153 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------C---------
T ss_pred             hcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC---------
Confidence            99999999999999776666 678999999999999999999999999885     699999998876543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       154 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  198 (250)
T 3nyw_A          154 -------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK  198 (250)
T ss_dssp             -------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh
Confidence                   567899999999999999999999999999999999999998653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.2e-37  Score=278.64  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=173.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888777777553  457899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.    +||++||..+..+.+           
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  150 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVR-----------  150 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCT-----------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCC-----------
Confidence            99999999999997777888889999999999999999999999999984    799999998876654           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       151 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          151 -----NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             -----CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc
Confidence                 6779999999999999999999999999999999999999997654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.4e-37  Score=286.45  Aligned_cols=191  Identities=18%  Similarity=0.133  Sum_probs=173.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+... ..++.++++|++|+++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888888765421 1378999999999999999999999


Q ss_pred             HhCCCccEEEECCCC-CCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +++|++|+||||||+ ....++.+.+.++|++++++|+.|+++++++++|.|.     +||++||..+..+.+       
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  159 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR-------  159 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-------
Confidence            999999999999998 4456778889999999999999999999999999985     699999998876654       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       160 ---------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          160 ---------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             ---------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence                     667899999999999999999999999999999999999999764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.7e-37  Score=282.33  Aligned_cols=189  Identities=20%  Similarity=0.247  Sum_probs=164.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.+++||++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998 56666666666666543  4678899999999999999999999


Q ss_pred             HhCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccc-cCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMD-RGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~-~~~~~~~~~~~~  205 (384)
                      +++|++|+||||||+. ...++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+. .+.+        
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  153 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP--------  153 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST--------
T ss_pred             HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC--------
Confidence            9999999999999986 556778889999999999999999999999999986   69999999876 4443        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||+|+++|+++++.|+++. |+||+|+||+++|++.+..
T Consensus       154 --------~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~  198 (259)
T 3edm_A          154 --------GALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTF  198 (259)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC------
T ss_pred             --------CcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccc
Confidence                    67799999999999999999999886 9999999999999998654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-37  Score=281.25  Aligned_cols=199  Identities=26%  Similarity=0.332  Sum_probs=174.7

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .+.+.++|+++||||++|||+++|++|+++|++|++++ |+.++.++..+++.+.  +.++.++++|++|.+++++++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            34578899999999999999999999999999999888 7777777777776554  46789999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+      
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  158 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF------  158 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS------
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC------
Confidence            999999999999999998777888889999999999999999999999999885     699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHH
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK  266 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~  266 (384)
                                +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...++....
T Consensus       159 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~  211 (256)
T 3ezl_A          159 ----------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK  211 (256)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHH
Confidence                      77899999999999999999999999999999999999999988766554443

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2e-37  Score=284.61  Aligned_cols=184  Identities=22%  Similarity=0.325  Sum_probs=170.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999987776665553     46789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  168 (277)
T 4dqx_A           98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA---------  168 (277)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC---------
Confidence            999999999999998778888889999999999999999999999999986     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.
T Consensus       169 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  211 (277)
T 4dqx_A          169 -------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYF  211 (277)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchh
Confidence                   7789999999999999999999999999999999999999984

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.6e-37  Score=278.11  Aligned_cols=189  Identities=24%  Similarity=0.370  Sum_probs=171.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++|+++||||++|||+++|++|+++|++|++++| +.++.++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 777777777766543  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP----------  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC----------
Confidence            99999999999997777778889999999999999999999999999874     799999998776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                            +...|++||+++++++++++.|++++||+||+|+||+++|++.+...
T Consensus       150 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  196 (246)
T 2uvd_A          150 ------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD  196 (246)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC
Confidence                  67799999999999999999999999999999999999999976543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-38  Score=289.52  Aligned_cols=188  Identities=23%  Similarity=0.370  Sum_probs=174.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA---TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +++||+++||||++|||+++|++|+++|+   +|++++|+.+++++..+++.+..++.++.+++||++|+++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999998   999999999999988888877655678999999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+      
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------  183 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP------  183 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT------
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC------
Confidence            999999999999999865 56778889999999999999999999999999984     699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus       184 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  226 (287)
T 3rku_A          184 ----------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS  226 (287)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc
Confidence                      6789999999999999999999999999999999999999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-37  Score=280.43  Aligned_cols=194  Identities=20%  Similarity=0.363  Sum_probs=171.9

Q ss_pred             CCCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Q psy2854          48 SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        48 ~~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      .+...++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHH
Confidence            344467899999999999999999999999999999999999888877777763332 4578889999999999999999


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcc-cccCCcCcCC
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSL-MDRGTIDFDN  201 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~-~~~~~~~~~~  201 (384)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||.. +..+.+    
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  167 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP----  167 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC----
Confidence            9999999999999999997777778889999999999999999999999999985     699999987 655443    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                  +...|++||+++++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       168 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          168 ------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc
Confidence                        667899999999999999999999999999999999999998654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.5e-37  Score=285.11  Aligned_cols=220  Identities=16%  Similarity=0.195  Sum_probs=177.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-------GQEALEKLKKEVQDGQIVLMELNLASFDSIKN  124 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~  124 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.+++||++|++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            46889999999999999999999999999999999999764       45555555544  5789999999999999999


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccC--Cc
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRG--TI  197 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~--~~  197 (384)
                      +++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+  .+
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999999998777888889999999999999999999999999985     6999999887655  22


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCccccCchH----HHHHHHHHHH
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPG-WCYTNLFRHADIK----FYQKVMIFPI  272 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~----~~~~~~~~~~  272 (384)
                                      +...|++||+|+++|+++++.|++++||+||+|+|| .++|++.+.....    +.........
T Consensus       160 ----------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~  223 (274)
T 3e03_A          160 ----------------AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADA  223 (274)
T ss_dssp             ----------------HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHH
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHH
Confidence                            567899999999999999999999999999999999 6999987432210    0000011223


Q ss_pred             HHHHHhhcccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTI  289 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i  289 (384)
                      ..+++...+...++..+
T Consensus       224 v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          224 AHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHTSCCTTCCSCEE
T ss_pred             HHHHhCccccccCCeEE
Confidence            34555555666666554

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.3e-37  Score=282.05  Aligned_cols=192  Identities=23%  Similarity=0.280  Sum_probs=167.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888888877654  5689999999999999999999999


Q ss_pred             HhCCCccEEEECCCC-CCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +.+|++|+||||||+ ....++.+.+.++|++++++|+.|++.+++.++|.|+     +||++||..+..+.+       
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  174 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA-------  174 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT-------
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC-------
Confidence            999999999999998 4456777889999999999999999999999999874     699999998876654       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                               +...|++||+|+++|+++++.|++++||+|++|+||+++|++.....
T Consensus       175 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  221 (262)
T 3rkr_A          175 ---------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS  221 (262)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc
Confidence                     67899999999999999999999999999999999999999976543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-37  Score=280.66  Aligned_cols=187  Identities=23%  Similarity=0.320  Sum_probs=166.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+ +..++..+++.+.  +.++.++++|++|+++++++.+.+ +
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~-~  102 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEEL-A  102 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHH-H
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH-H
Confidence            46889999999999999999999999999999999976 4556666666543  568899999999999999995544 5


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus       103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~---------  173 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR---------  173 (273)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---------
T ss_pred             hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC---------
Confidence            569999999999998878888889999999999999999999999999985     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       174 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (273)
T 3uf0_A          174 -------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAA  218 (273)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh
Confidence                   678999999999999999999999999999999999999998754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-36  Score=278.50  Aligned_cols=189  Identities=25%  Similarity=0.321  Sum_probs=168.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999988887777777553  45788999999999999999999999


Q ss_pred             hC-CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~-g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .+ |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+        
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------  166 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP--------  166 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC--------
Confidence            99 9999999999997777788889999999999999999999999999884     799999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       167 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          167 --------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence                    677999999999999999999999999999999999999999754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.9e-37  Score=283.96  Aligned_cols=188  Identities=21%  Similarity=0.239  Sum_probs=162.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777766655     35788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|+       +||++||..+..+.+      
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------  172 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP------  172 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT------
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC------
Confidence            99999999999999654 5778889999999999999999999999999984       699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       173 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          173 ----------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence                      67899999999999999999999999999999999999999976543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.2e-37  Score=285.54  Aligned_cols=189  Identities=17%  Similarity=0.231  Sum_probs=170.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-------hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-------RGQEALEKLKKEVQDGQIVLMELNLASFDSIK  123 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~  123 (384)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.  +.++.+++||++|+++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            35789999999999999999999999999999999999976       456666666554  568999999999999999


Q ss_pred             HHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCC-c
Q psy2854         124 NFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGT-I  197 (384)
Q Consensus       124 ~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~-~  197 (384)
                      ++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+. +
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            99999999999999999999998888888899999999999999999999999999985     69999998876653 2


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCccc
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPG-WCYTNLFR  257 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG-~v~T~~~~  257 (384)
                                      +...|++||+|+++|+++++.|++++||+||+|+|| .++|++.+
T Consensus       162 ----------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~  206 (285)
T 3sc4_A          162 ----------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ  206 (285)
T ss_dssp             ----------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHH
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHH
Confidence                            567899999999999999999999999999999999 79998754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-37  Score=284.25  Aligned_cols=190  Identities=18%  Similarity=0.232  Sum_probs=166.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +..+.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888876653 34468899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|+       +||++||..+..+.+      
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------  181 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP------  181 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC------
Confidence            99999999999998654 6778889999999999999999999999999984       699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       182 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  226 (281)
T 4dry_A          182 ----------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR  226 (281)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----
T ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh
Confidence                      778999999999999999999999999999999999999998653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.8e-36  Score=280.89  Aligned_cols=190  Identities=13%  Similarity=0.107  Sum_probs=168.5

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||+++||||+|  |||+++|++|+++|++|++++|+.+..+. .+++.+..  +.+.+++||++|+++++++++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAESL--GVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHH--TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhc--CCeEEEEcCCCCHHHHHHHHHHH
Confidence            468899999999997  99999999999999999999999654433 44444433  34688999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|++++++|+.+++++++.++|.|+   +||++||..+..+.+     
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~-----  177 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP-----  177 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-----
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC-----
Confidence            9999999999999999654    6677889999999999999999999999999986   699999998876655     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       178 -----------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~  224 (296)
T 3k31_A          178 -----------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS  224 (296)
T ss_dssp             -----------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH
T ss_pred             -----------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc
Confidence                       67789999999999999999999999999999999999999987653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.8e-37  Score=287.49  Aligned_cols=188  Identities=21%  Similarity=0.262  Sum_probs=170.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.  +.++.++++|++|+
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDL  119 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            46889999999999999999999999999999999886            45555555555443  56899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMD  193 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~  193 (384)
                      ++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+.
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            999999999999999999999999998888888899999999999999999999999999983      49999999887


Q ss_pred             cCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         194 RGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus       200 ~~~~----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          200 RGAP----------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             SCCT----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             CCCC----------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            7655                77899999999999999999999999999999999999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.2e-36  Score=279.78  Aligned_cols=189  Identities=18%  Similarity=0.212  Sum_probs=165.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++++|++|+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDR   86 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence            46899999999999999999999999999999999987            55666666665544  56899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMD  193 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~  193 (384)
                      ++++++++++.+++|++|+||||||+.....    +.++|++++++|+.|+++++++++|+|.      +||++||..+.
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999999999999999999864433    6899999999999999999999999883      69999999887


Q ss_pred             cCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         194 RGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .+...            ..++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       163 ~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          163 AGVGS------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             SCCCC------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             CCCcc------------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            65410            001667899999999999999999999999999999999999999764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-37  Score=281.43  Aligned_cols=188  Identities=22%  Similarity=0.239  Sum_probs=157.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988877766655     35688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCC----CCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEK----LTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGT  196 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~  196 (384)
                      ++|++|+||||||+....++.    +.+.++|++++++|+.|+++++++++|+|+           +||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999999986654432    568899999999999999999999999975           39999999887766


Q ss_pred             cCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         197 IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      +                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       158 ~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  205 (257)
T 3tpc_A          158 I----------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP  205 (257)
T ss_dssp             T----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred             C----------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC
Confidence            5                67899999999999999999999999999999999999999976543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-37  Score=280.79  Aligned_cols=190  Identities=20%  Similarity=0.257  Sum_probs=172.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++++|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888888777776654456789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|++.+++.++|.|+     +||++||..+..+.+        
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  160 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG--------  160 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS--------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC--------
Confidence            99999999999998765 6777889999999999999999999999999884     699999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       161 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  204 (267)
T 1iy8_A          161 --------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVE  204 (267)
T ss_dssp             --------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchh
Confidence                    67899999999999999999999999999999999999999854

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7.5e-37  Score=282.79  Aligned_cols=190  Identities=23%  Similarity=0.305  Sum_probs=168.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++..+...+..+.. +.++.++++|++|+++++++++++.+
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999875544444433332 46899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+   +||++||..+..+.+          
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------  191 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----------  191 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT----------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC----------
Confidence            99999999999998644 4677789999999999999999999999999986   699999998877655          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       192 ------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          192 ------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred             ------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence                  678999999999999999999999999999999999999998643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-36  Score=276.84  Aligned_cols=186  Identities=22%  Similarity=0.332  Sum_probs=170.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+..+.+|++|++++++++    +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----E   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----H
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----H
Confidence            468899999999999999999999999999999999999999998888887765677889999999999887765    4


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  152 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ---------  152 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT---------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC---------
Confidence            579999999999998888888889999999999999999999999999984     799999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||.++|++.+
T Consensus       153 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  196 (267)
T 3t4x_A          153 -------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE  196 (267)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHH
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHH
Confidence                   77899999999999999999999999999999999999999754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=9.6e-37  Score=277.70  Aligned_cols=188  Identities=24%  Similarity=0.321  Sum_probs=161.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|.++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999987777666544     4678999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---------cEEEEcCcccccCCcCcC
Q psy2854         131 KQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---------KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---------~iv~vsS~~~~~~~~~~~  200 (384)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|+         +||++||..+..+.+   
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  155 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP---  155 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT---
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC---
Confidence            99999999999999865 45667779999999999999999999999999985         299999998876655   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                   ....|++||+|+++|+++++.|++++||+|++|+||+++|++.+..
T Consensus       156 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          156 -------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh
Confidence                         6778999999999999999999999999999999999999997653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=3.4e-36  Score=278.59  Aligned_cols=190  Identities=15%  Similarity=0.107  Sum_probs=164.4

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+ ..+..+++.+..  +++.+++||++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            45889999999999  55999999999999999999999843 344455555543  46889999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCC----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSV----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+..    ..++.+.+.++|++++++|+.++++++++++|+|+   +||++||..+..+.+     
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----  178 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP-----  178 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT-----
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC-----
Confidence            999999999999999965    46777889999999999999999999999999987   799999998877655     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       179 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  225 (293)
T 3grk_A          179 -----------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG  225 (293)
T ss_dssp             -----------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc
Confidence                       67799999999999999999999999999999999999999976543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1e-36  Score=278.26  Aligned_cols=191  Identities=20%  Similarity=0.229  Sum_probs=170.5

Q ss_pred             CCCCCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN-SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas-~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+. .+.++.++++|++|+++++++++++.
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            46899999999997 59999999999999999999999998888888887544 34689999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.+++++++.++|+|+      +||++||..+..+.+       
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  169 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH-------  169 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT-------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC-------
Confidence            9999999999999998778888889999999999999999999999999874      599999998876654       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+..
T Consensus       170 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          170 ---------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence                     7789999999999999999999999999999999999999997654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-36  Score=276.26  Aligned_cols=189  Identities=20%  Similarity=0.236  Sum_probs=153.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888888887654  5688999999999999999999999


Q ss_pred             HhCCCccEEEECCCCC---CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVS---VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++++++|+||||||+.   ...++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..        
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  153 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------  153 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC--------
Confidence            9999999999999983   334566789999999999999999999999999985     599999987652        


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...
T Consensus       154 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  200 (253)
T 3qiv_A          154 -----------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT  200 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC
Confidence                       44579999999999999999999999999999999999999876543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.1e-37  Score=284.74  Aligned_cols=189  Identities=20%  Similarity=0.254  Sum_probs=174.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888888887664  56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+..+.+        
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  176 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--------  176 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT--------
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------
Confidence            999999999999998778888889999999999999999999999999874      699999998887655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+|+++|+++++.|+++.||+|++|+||+|+|++.+.
T Consensus       177 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          177 --------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc
Confidence                    778999999999999999999999999999999999999998643

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4e-37  Score=284.10  Aligned_cols=198  Identities=17%  Similarity=0.211  Sum_probs=167.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++++|++|+
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCH
Confidence            56899999999999999999999999999999999997            55555555555443  56899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCC
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGT  196 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~  196 (384)
                      ++++++++++.+++|++|+||||||+.... . +.+.++|++++++|+.|+++++++++|+|.   +||++||..+..+.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLG-A-HLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC-T-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCccc-C-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc
Confidence            999999999999999999999999986544 2 368999999999999999999999999986   69999999877654


Q ss_pred             cCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         197 IDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ...... .....    ++...|++||+++++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus       162 ~~~~~~-~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          162 AQPPGA-GGPQG----PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HCCC------CH----HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             cccccc-cccCC----CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            211100 00001    1567899999999999999999999999999999999999999764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-36  Score=272.08  Aligned_cols=185  Identities=21%  Similarity=0.250  Sum_probs=165.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++       .+.++++|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999976655443322       2778899999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||.. ..+.+          
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~----------  143 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL----------  143 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCC----------
Confidence            99999999999997777778889999999999999999999999999985     699999987 55543          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                            +...|++||+++++|+++++.|++++||+||+|+||+++|++.+....
T Consensus       144 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  191 (245)
T 1uls_A          144 ------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE  191 (245)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH
Confidence                  667899999999999999999999999999999999999999876543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.3e-36  Score=278.46  Aligned_cols=191  Identities=23%  Similarity=0.275  Sum_probs=167.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++ .++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999996544 34444444433  5689999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+        
T Consensus       103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  174 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM--------  174 (271)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--------
T ss_pred             HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC--------
Confidence            9999999999999998877888889999999999999999999999999884     699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                              +...|++||+|+++++++++.|++++||+|++|+||+++|++.+...
T Consensus       175 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (271)
T 4iin_A          175 --------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK  221 (271)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------
T ss_pred             --------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc
Confidence                    77899999999999999999999999999999999999999977654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=6.2e-37  Score=279.62  Aligned_cols=185  Identities=18%  Similarity=0.259  Sum_probs=166.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++.+|+++||||++|||+++|++|+++|++|++++|+.+++++.        ...++.++++|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999986544322        134788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+         
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---------  154 (266)
T 3p19_A           84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP---------  154 (266)
T ss_dssp             HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT---------
T ss_pred             HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC---------
Confidence            999999999999998778888889999999999999999999999999885     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       155 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          155 -------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence                   67899999999999999999999999999999999999999987654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.4e-36  Score=277.90  Aligned_cols=190  Identities=23%  Similarity=0.328  Sum_probs=167.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++|+++||||++|||+++|++|+++|++|++++ |+.+..++..+++..  .+.++.++++|++|+++++++++++.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD--AGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT--TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999998 554445554444433  256789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|+     +||++||..+..+.+         
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  170 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF---------  170 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC---------
Confidence            999999999999998878888889999999999999999999999999874     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...
T Consensus       171 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  217 (269)
T 3gk3_A          171 -------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP  217 (269)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc
Confidence                   77899999999999999999999999999999999999999987654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-36  Score=278.57  Aligned_cols=188  Identities=22%  Similarity=0.296  Sum_probs=169.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   +++.++++|++|+++++++++++.+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS---SCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999988777766666431   3788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc---------CcEEEEcCcccccCCcCcCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI---------QKVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l---------~~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|         .+||++||..+..+.+     
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-----  176 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-----  176 (276)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-----
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-----
Confidence            99999999999999777778888999999999999999999999999987         4699999998776544     


Q ss_pred             CcCcCcccCCCChh-hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNP-AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~-~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 +.. .|++||+++++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       177 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  222 (276)
T 2b4q_A          177 -----------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH  222 (276)
T ss_dssp             -----------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred             -----------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence                       445 899999999999999999999999999999999999998654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.5e-36  Score=284.22  Aligned_cols=192  Identities=21%  Similarity=0.289  Sum_probs=171.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+++||||+||||+++|++|+++|++|++++|+.+++++..+++.....+.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999988888887664334899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~~~~~  200 (384)
                      .+|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|.           +||++||.++..+.+   
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---  160 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---  160 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence            999999999999998888888889999999999999999999999999884           399999999887765   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                   +...|++||+|+++|+++++.|++++||+|++|+||+|+|++....
T Consensus       161 -------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          161 -------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             -------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence                         6789999999999999999999999999999999999999998654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=8.6e-37  Score=286.48  Aligned_cols=191  Identities=21%  Similarity=0.283  Sum_probs=173.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----------chhHHHHHHHHHHHhcCCcEEEEEeecCCHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS----------MIRGQEALEKLKKEVQDGQIVLMELNLASFD  120 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~  120 (384)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+          .++.++..+++.+.  +.++.++++|++|++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHH
Confidence            346889999999999999999999999999999999998          66777777777654  568899999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcC
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGS  189 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS  189 (384)
                      +++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|++++++++.|.|.           +||++||
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            99999999999999999999999998878888889999999999999999999999999874           7999999


Q ss_pred             cccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         190 SLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      ..+..+.+                +...|++||+|+++|+++++.|++++||+||+|+|| +.|++.+...
T Consensus       180 ~~~~~~~~----------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~  233 (322)
T 3qlj_A          180 GAGLQGSV----------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF  233 (322)
T ss_dssp             HHHHHCBT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC
T ss_pred             HHHccCCC----------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh
Confidence            98877655                678999999999999999999999999999999999 9999976543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.8e-36  Score=275.74  Aligned_cols=188  Identities=23%  Similarity=0.355  Sum_probs=166.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ +++..+++.+.. +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999887 777776665432 357888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+          
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  150 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------  150 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC----------
Confidence            99999999999987767777889999999999999999999999999884     799999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       151 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (260)
T 1x1t_A          151 ------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH
Confidence                  677999999999999999999999999999999999999998654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-36  Score=271.01  Aligned_cols=181  Identities=24%  Similarity=0.262  Sum_probs=163.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ||+++||||++|||+++|++|+++|  ++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999985  78999999987766655544     3578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      |++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+    +||++||..+..+.+           
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~-----------  145 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFS-----------  145 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSC-----------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCC-----------
Confidence            999999999998544 6778889999999999999999999999999985    699999998877655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|++||+|+++|+++++.|+  +||+||+|+||+++|++.+..
T Consensus       146 -----~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          146 -----SWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCC
T ss_pred             -----CcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHh
Confidence                 77899999999999999999998  689999999999999998654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3e-36  Score=274.67  Aligned_cols=187  Identities=24%  Similarity=0.298  Sum_probs=165.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ..++.++++|++|+++++++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999977665554433     257889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+. +.+            
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~------------  144 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF------------  144 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC------------
Confidence            99999999999997777778889999999999999999999999999983   79999999876 543            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                          +...|++||+++++++++++.|++++||+||+|+||+++|++.+...+
T Consensus       145 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  192 (263)
T 2a4k_A          145 ----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP  192 (263)
T ss_dssp             ----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH
T ss_pred             ----CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH
Confidence                677999999999999999999999999999999999999999876543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.8e-36  Score=277.15  Aligned_cols=180  Identities=23%  Similarity=0.333  Sum_probs=162.1

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+..            ......+++|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999986533            125677899999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+       
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  148 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-------  148 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-------
Confidence            99999999999999998777888889999999999999999999999999884     799999998877655       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||+|+++|+++++.|+++ ||+||+|+||+|+|++...
T Consensus       149 ---------~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          149 ---------NAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHH
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhh
Confidence                     6789999999999999999999988 9999999999999998643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3e-36  Score=274.32  Aligned_cols=189  Identities=24%  Similarity=0.310  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988887777777543  45788999999999999999999999


Q ss_pred             hC-CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~-g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++ +++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+        
T Consensus        83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  154 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP--------  154 (260)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC--------
Confidence            99 8999999999997767777889999999999999999999999999874     799999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+++++++++++.|++++||+||+|+||.++|++.+.
T Consensus       155 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          155 --------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence                    667899999999999999999999999999999999999998643

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.3e-36  Score=276.31  Aligned_cols=188  Identities=15%  Similarity=0.112  Sum_probs=167.9

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..  +.+.++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999976 555666666543  247789999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++|++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+      
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------  153 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA------  153 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC------
Confidence            999999999999998654    5667789999999999999999999999999985   799999988766544      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                +...|++||+|+++++++++.|++++||+||+|+||+|+|++.+..
T Consensus       154 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  199 (275)
T 2pd4_A          154 ----------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI  199 (275)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred             ----------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc
Confidence                      6678999999999999999999999999999999999999997654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.3e-37  Score=283.41  Aligned_cols=196  Identities=37%  Similarity=0.557  Sum_probs=164.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++  
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~--   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV--   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence            5689999999999999999999999999999999999987766655443     468999999999999999988766  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                        +++|+||||||+..+  ..+.+.++|++++++|+.|+++++++++|.|. +||++||.++..+.+...+......   
T Consensus        85 --~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~---  157 (291)
T 3rd5_A           85 --SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSR---  157 (291)
T ss_dssp             --CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSS---
T ss_pred             --CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccccccccc---
Confidence              799999999998543  34568899999999999999999999999997 8999999998877665544433311   


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCccccCch
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKG--VDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~  261 (384)
                      ..++...|++||+|+++|+++++.|++++|  |+|++|+||+|+|++.+....
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~  210 (291)
T 3rd5_A          158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR  210 (291)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch
Confidence            122678999999999999999999999877  999999999999999877543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.8e-36  Score=279.38  Aligned_cols=186  Identities=20%  Similarity=0.263  Sum_probs=165.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+  ..++..+.+.+.  +.++.++++|++|+++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998732  333443433332  567899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcC
Q psy2854         130 MKQYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+        
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~--------  194 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP--------  194 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT--------
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC--------
Confidence            999999999999999855 45677889999999999999999999999999986   699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                              +...|++||+|+++|+++++.|++++||+||+|+||+|+|++
T Consensus       195 --------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          195 --------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence                    778999999999999999999999999999999999999998

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.4e-36  Score=273.27  Aligned_cols=184  Identities=20%  Similarity=0.311  Sum_probs=161.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. ++.++   ++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999997 65554   23222  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  149 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE---------  149 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC---------
Confidence            999999999999997777778889999999999999999999999999884     799999998876654         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       150 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          150 -------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence                   67799999999999999999999999999999999999999865

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=9.7e-36  Score=274.61  Aligned_cols=188  Identities=16%  Similarity=0.171  Sum_probs=166.1

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++|+++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999875 5556666655432  36789999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      +++|++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|.|+    +||++||..+..+.+     
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  169 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP-----  169 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-----
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-----
Confidence            999999999999998653    4566789999999999999999999999999986    799999988766544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 +...|++||+|+++++++++.|++++||+||+|+||+++|++.+..
T Consensus       170 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (285)
T 2p91_A          170 -----------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI  215 (285)
T ss_dssp             -----------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc
Confidence                       6678999999999999999999999999999999999999987653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1e-35  Score=271.73  Aligned_cols=192  Identities=11%  Similarity=0.078  Sum_probs=171.2

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+ ..+..+++.+..+..++.+++||++|+++++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER-LEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH-HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            36889999999999  67999999999999999999999854 4445555555554457999999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCC----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSV----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+..    ..++.+.+.++|++++++|+.+++.+++.++|.|+   +||++||..+..+.+     
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  156 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP-----  156 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-----
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC-----
Confidence            999999999999999865    35667789999999999999999999999999987   699999998877655     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 +...|++||+|+++|+++++.|++++||+|++|+||+|+|++.+...
T Consensus       157 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          157 -----------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence                       77899999999999999999999999999999999999999987654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-36  Score=276.19  Aligned_cols=189  Identities=22%  Similarity=0.274  Sum_probs=171.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777766543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|.     +||++||..+..+.+        
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  152 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP--------  152 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT--------
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC--------
Confidence            999999999999986 556777889999999999999999999999999874     799999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||+++++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       153 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          153 --------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence                    677999999999999999999999999999999999999998643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=5.7e-36  Score=276.92  Aligned_cols=187  Identities=17%  Similarity=0.200  Sum_probs=166.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHH----------
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFD----------  120 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~----------  120 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++ |+.+++++..+++.+.. +.++.++++|++|++          
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----C
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccc
Confidence            457899999999999999999999999999999999 99888888777775332 467899999999999          


Q ss_pred             -------HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCC--------------hhhHHHHhchhhhHHHHHHHHHHH
Q psy2854         121 -------SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTT--------------KEGYEVHFGINHVGHFLLTNLLIE  179 (384)
Q Consensus       121 -------~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~~~~~~  179 (384)
                             +++++++++.+++|++|+||||||+....++.+.+              .++|++++++|+.|+++++++++|
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   99999999999999999999999997777777778              899999999999999999999999


Q ss_pred             hcC-----------cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEec
Q psy2854         180 RIQ-----------KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCP  248 (384)
Q Consensus       180 ~l~-----------~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~P  248 (384)
                      .|+           +||++||..+..+.+                +...|++||+++++|+++++.|++++||+||+|+|
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  227 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLL----------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  227 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCC----------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEee
Confidence            872           599999998876654                67899999999999999999999999999999999


Q ss_pred             CcccCCc
Q psy2854         249 GWCYTNL  255 (384)
Q Consensus       249 G~v~T~~  255 (384)
                      |+++|++
T Consensus       228 G~v~T~~  234 (291)
T 1e7w_A          228 GLSVLVD  234 (291)
T ss_dssp             SSBCCGG
T ss_pred             CCccCCc
Confidence            9999999

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-36  Score=274.87  Aligned_cols=189  Identities=24%  Similarity=0.307  Sum_probs=170.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeec--CCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL--ASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--s~~~~v~~~~~~i  129 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ..+..++.+|+  +|.++++++++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999998888888876642 34566777777  9999999999999


Q ss_pred             HHhCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .+.+|++|+||||||+. ...++.+.+.++|++++++|+.|++.+++.++|+|+     +||++||..+..+.+      
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  162 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA------  162 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT------
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC------
Confidence            99999999999999985 345677889999999999999999999999999985     699999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~T~~~~  257 (384)
                                +...|++||+|+++|+++++.|+++ +||+||+|+||+++|+|.+
T Consensus       163 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~  207 (247)
T 3i1j_A          163 ----------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRA  207 (247)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHH
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccch
Confidence                      7789999999999999999999987 8999999999999999864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-36  Score=271.42  Aligned_cols=185  Identities=22%  Similarity=0.272  Sum_probs=168.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||+++|++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.+++|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988887777776543  457889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+      +||++||..+..+.+            
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  147 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------  147 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC------------
Confidence            99999999997777778889999999999999999999999999873      799999998876654            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          +...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       148 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  192 (256)
T 1geg_A          148 ----ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE  192 (256)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence                677899999999999999999999999999999999999998643

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=272.10  Aligned_cols=191  Identities=15%  Similarity=0.141  Sum_probs=165.6

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        51 ~~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ..++++|+++||||+  +|||+++|++|+++|++|++++|+. +..+..+++.+..  +++.+++||++|++++++++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEF--GSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHH
Confidence            357899999999998  9999999999999999999999984 4455566665553  3578899999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCC----CCCCC-CChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcC
Q psy2854         129 VMKQYPKIHVLINNAGVSVP----IKEKL-TTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~  200 (384)
                      +.+++|++|+||||||+...    .++.+ .+.++|++++++|+.+++++++.++|.|+   +||++||..+..+.+   
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---  162 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP---  162 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT---
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC---
Confidence            99999999999999998664    45555 79999999999999999999999999986   799999998877655   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                   +...|++||+|+++|+++++.|++++||+|++|+||+|+|++.+...
T Consensus       163 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  209 (271)
T 3ek2_A          163 -------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK  209 (271)
T ss_dssp             -------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH
T ss_pred             -------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc
Confidence                         67799999999999999999999999999999999999999987654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.1e-35  Score=271.67  Aligned_cols=196  Identities=21%  Similarity=0.307  Sum_probs=173.9

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+.. +.++.+++||++|++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence            36899999999999  9999999999999999999999887665 66677776554 56899999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+...     
T Consensus        95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  169 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP-----  169 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-----
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-----
Confidence            999999999999999998878888889999999999999999999999999885     6999999887655320     


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHH
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF  263 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  263 (384)
                               ++...|++||+|+++|+++++.|+++. |+||+|+||+++|++.+......
T Consensus       170 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~  219 (267)
T 3gdg_A          170 ---------QEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKET  219 (267)
T ss_dssp             ---------SCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHH
Confidence                     156789999999999999999999887 99999999999999987665443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.8e-36  Score=272.90  Aligned_cols=189  Identities=22%  Similarity=0.303  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888877777775542 35788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|+     +||++||..+..+.+         
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  152 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW---------  152 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC---------
Confidence            999999999999997777788889999999999999999999999999874     699999998876544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (263)
T 3ai3_A          153 -------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI  196 (263)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence                   66789999999999999999999999999999999999999854

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=7.5e-36  Score=275.09  Aligned_cols=190  Identities=25%  Similarity=0.412  Sum_probs=168.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++ .++..+++.+.  +.++.++++|++|.++++++++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998754 34444555443  4678899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +.+|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+.         
T Consensus       103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  173 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP---------  173 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS---------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC---------
Confidence            9999999999999997777778889999999999999999999999999974   7999999887655431         


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       174 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  218 (283)
T 1g0o_A          174 ------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  218 (283)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhh
Confidence                  367899999999999999999999999999999999999998543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5.1e-36  Score=272.83  Aligned_cols=188  Identities=20%  Similarity=0.226  Sum_probs=170.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++....++.++.++++|++|+++++++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999998888877777754322337889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +| +|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        84 ~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  152 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ----------  152 (260)
T ss_dssp             TC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             cC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC----------
Confidence            99 99999999987777778889999999999999999999999999884     699999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       153 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          153 ------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             ------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence                  67799999999999999999999999999999999999999975

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5.1e-36  Score=272.65  Aligned_cols=181  Identities=15%  Similarity=0.214  Sum_probs=156.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++..+..++   .    .+.++++|++|+++++++++++.+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A----GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c----CCeEEECCCCCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999998765443332   2    377899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....+ .+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+         
T Consensus        96 ~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  165 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS---------  165 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS---------
T ss_pred             hcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---------
Confidence            9999999999999865555 5568899999999999999999999999984     699999998877655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+|+++|+++++.|+++ +|+||+|+||+++|++..
T Consensus       166 -------~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          166 -------KHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred             -------CcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence                   7789999999999999999999988 799999999999999754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.4e-36  Score=273.01  Aligned_cols=183  Identities=22%  Similarity=0.279  Sum_probs=165.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999977666554443     346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  146 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----------  146 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC----------
Confidence            99999999999987767777889999999999999999999999999884     799999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                            +...|++||+++++|+++++.|++++||+||+|+||+++|++.
T Consensus       147 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1hdc_A          147 ------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT  189 (254)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc
Confidence                  6779999999999999999999999999999999999999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-36  Score=274.64  Aligned_cols=189  Identities=24%  Similarity=0.269  Sum_probs=170.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCC---cEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG---QIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.   ++.++++|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777776543  23   7899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCC----CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCC-cCcC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIK----EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGT-IDFD  200 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~-~~~~  200 (384)
                      .+++|++|+||||||+....+    +.+.+.++|++++++|+.+++++++.++|.|.    +||++||..+..+. +   
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  157 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP---  157 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC---
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCC---
Confidence            999999999999999876655    66779999999999999999999999999884    79999999876654 3   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                   +...|++||+++++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       158 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  203 (280)
T 1xkq_A          158 -------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM  203 (280)
T ss_dssp             -------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc
Confidence                         6678999999999999999999999999999999999999986543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=5.6e-36  Score=272.23  Aligned_cols=184  Identities=20%  Similarity=0.250  Sum_probs=167.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR--GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  +++..+++.+.  +.++.++++|++|+++++++++++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999877  66666666543  4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc------CcEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l------~~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      |++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|      .+||++||..+..+.+          
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP----------  149 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC----------
Confidence            999999999999777777888999999999999999999999999986      4799999998776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++|+++++.|++++||+||+|+||+++|++.+
T Consensus       150 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  193 (258)
T 3a28_C          150 ------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE  193 (258)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh
Confidence                  67799999999999999999999999999999999999999854

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=6.5e-36  Score=273.19  Aligned_cols=190  Identities=17%  Similarity=0.216  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++.+|+++||||++|||+++|++|+++|++|++ ..|+.++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999966 557777777777777654  5688999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.|++++++.+++.|.      +||++||..+..+.+       
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  172 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR-------  172 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT-------
T ss_pred             HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC-------
Confidence            9999999999999998777888889999999999999999999999987763      699999998877655       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+..
T Consensus       173 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          173 ---------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc
Confidence                     7789999999999999999999999999999999999999998765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=9.1e-36  Score=273.65  Aligned_cols=187  Identities=26%  Similarity=0.340  Sum_probs=170.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887777777553  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.  |+     +||++||..+..+.+        
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------  168 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV--------  168 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT--------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC--------
Confidence            999999999999977777788899999999999999999999999998  63     799999998776554        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+++++++++++.|+++.||+||+|+||+++|++.+
T Consensus       169 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  212 (277)
T 2rhc_B          169 --------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA  212 (277)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh
Confidence                    67789999999999999999999999999999999999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.2e-35  Score=269.38  Aligned_cols=190  Identities=22%  Similarity=0.322  Sum_probs=171.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++|+++||||++|||+++|++|+++|++|+++ +|+.++.++..+++.+.  +.++.++++|++|.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999885 67777777777777654  56788999999999999999999988


Q ss_pred             hCC------CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         132 QYP------KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       132 ~~g------~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      +++      ++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+   +||++||..+..+.+     
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----  156 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP-----  156 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT-----
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC-----
Confidence            764      599999999997777788889999999999999999999999999986   799999998877665     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...
T Consensus       157 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          157 -----------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT
T ss_pred             -----------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc
Confidence                       67899999999999999999999999999999999999999987653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1e-35  Score=270.81  Aligned_cols=188  Identities=22%  Similarity=0.256  Sum_probs=170.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988887777777543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+     +||++||..+..+.+        
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  159 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP--------  159 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC--------
Confidence            9999999999999854 35667789999999999999999999999999874     699999998876544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+++++|+++++.|++++||+||+|+||+++|++.+
T Consensus       160 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          160 --------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch
Confidence                    67799999999999999999999999999999999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=7.9e-36  Score=274.60  Aligned_cols=184  Identities=23%  Similarity=0.208  Sum_probs=160.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..++    . +.++.++++|++|+++++++++++.++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA----H-GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----T-BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----c-CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999997766554433    2 467899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCC-CC----CCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVPI-KE----KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~-~~----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +|++|+||||||+.... ++    .+.+.++|++++++|+.|+++++++++|+|.    +||++||..+..+.+      
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  150 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG------  150 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS------
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC------
Confidence            99999999999985432 22    2345678999999999999999999999985    799999998877655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                +...|++||+|+++|+++++.|+++. |+||+|+||+++|+|...
T Consensus       151 ----------~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          151 ----------GGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCC
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccc
Confidence                      67889999999999999999999987 999999999999998754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-36  Score=276.60  Aligned_cols=189  Identities=24%  Similarity=0.294  Sum_probs=170.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCC---cEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDG---QIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.   ++.++++|++|++++++++++
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888777777553  33   789999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCC--CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCC-cCcCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIK--EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGT-IDFDN  201 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~-~~~~~  201 (384)
                      +.+++|++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|+    +||++||..+..+. +    
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~----  175 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS----  175 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT----
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCC----
Confidence            9999999999999999876666  77789999999999999999999999999984    79999998876654 3    


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                  +...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       176 ------------~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~  220 (297)
T 1xhl_A          176 ------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA  220 (297)
T ss_dssp             ------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHH
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccc
Confidence                        667899999999999999999999999999999999999998654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.6e-36  Score=275.61  Aligned_cols=187  Identities=21%  Similarity=0.238  Sum_probs=155.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.++.   .+++     +.++.++++|++|+++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999965432   2222     4678999999999999999999887


Q ss_pred             HhCCCccEEEECCCCCCCCC----CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------------cEEEEcCcccc
Q psy2854         131 KQYPKIHVLINNAGVSVPIK----EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------------KVVIVGSSLMD  193 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------------~iv~vsS~~~~  193 (384)
                      + +|++|+||||||+....+    ..+.+.++|++++++|+.|+++++++++|+|.             +||++||..+.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 899999999999854332    23468999999999999999999999999875             49999999887


Q ss_pred             cCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         194 RGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                      .+.+                +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...+.
T Consensus       155 ~~~~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~  207 (257)
T 3tl3_A          155 DGQI----------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE  207 (257)
T ss_dssp             CCHH----------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH
T ss_pred             CCCC----------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH
Confidence            7655                6789999999999999999999999999999999999999998776543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.2e-35  Score=266.24  Aligned_cols=186  Identities=22%  Similarity=0.315  Sum_probs=167.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.+++||++|+++++++++++.+++|
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999999999999999888888886443 56899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      ++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+    ++|+++|..+..+.+             
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------------  146 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP-------------  146 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT-------------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC-------------
Confidence            999999999998888888899999999999999999999999999874    588999988776654             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                         ....|++||+++++|+++++.  ..+||+|++|+||+++|++.+..
T Consensus       147 ---~~~~Y~~sKaa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~  190 (235)
T 3l77_A          147 ---YGGGYVSTKWAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSK  190 (235)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCC
T ss_pred             ---CcchHHHHHHHHHHHHHHHhh--cCCCeEEEEEeCCcccccccccc
Confidence               667899999999999999944  47799999999999999997654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.2e-35  Score=270.42  Aligned_cols=184  Identities=20%  Similarity=0.284  Sum_probs=166.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.     .++.++++|++|+++++++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999877666554442     24788999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  148 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------  148 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC----------
Confidence            99999999999997777788889999999999999999999999999874     699999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++++||+|++|+||+++|++.+
T Consensus       149 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          149 ------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence                  66789999999999999999999999999999999999999854

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=7.7e-36  Score=269.66  Aligned_cols=180  Identities=19%  Similarity=0.302  Sum_probs=158.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999987766655544     2478899999999999999999999999999


Q ss_pred             cEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+             
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------  142 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA-------------  142 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT-------------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC-------------
Confidence            99999999863 45677789999999999999999999999999884     699999998876544             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY-TNLFR  257 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~-T~~~~  257 (384)
                         +...|++||+++++|+++++.|++++||+||+|+||+++ |++.+
T Consensus       143 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          143 ---GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence               677999999999999999999999999999999999999 99864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-35  Score=268.76  Aligned_cols=187  Identities=22%  Similarity=0.262  Sum_probs=165.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999988888777777654  467889999999999999999999886


Q ss_pred             -CCCccEEEECCCC--C-----CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCc
Q psy2854         133 -YPKIHVLINNAGV--S-----VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       133 -~g~id~lvnnAG~--~-----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~  199 (384)
                       +|++|+||||||.  .     ...++.+.+.++|++++++|+.+++++++.++|.|.     +||++||..+..+.   
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  156 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM---  156 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC---
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC---
Confidence             8999999999953  2     235667778899999999999999999999999884     69999998775432   


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                    +...|++||+++++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       157 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  201 (260)
T 2qq5_A          157 --------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE  201 (260)
T ss_dssp             --------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH
Confidence                          446899999999999999999999999999999999999999754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-35  Score=269.87  Aligned_cols=185  Identities=23%  Similarity=0.352  Sum_probs=165.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876  4444555432  457888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  146 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST----------  146 (255)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC----------
Confidence            99999999999997767777889999999999999999999999999884     699999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       147 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (255)
T 2q2v_A          147 ------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ  190 (255)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh
Confidence                  67799999999999999999999999999999999999999854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.9e-35  Score=270.13  Aligned_cols=186  Identities=23%  Similarity=0.227  Sum_probs=163.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCH----HHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASF----DSIKNFA  126 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~----~~v~~~~  126 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.++.++..+++.+.. +.++.++++|++|+    +++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDII   85 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHH
Confidence            3578999999999999999999999999999999999 8887777777775542 35788999999999    9999999


Q ss_pred             HHHHHhCCCccEEEECCCCCCCCCCCCCCh-----------hhHHHHhchhhhHHHHHHHHHHHhc----------CcEE
Q psy2854         127 KNVMKQYPKIHVLINNAGVSVPIKEKLTTK-----------EGYEVHFGINHVGHFLLTNLLIERI----------QKVV  185 (384)
Q Consensus       127 ~~i~~~~g~id~lvnnAG~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~l----------~~iv  185 (384)
                      +++.+++|++|+||||||+....++.+.+.           ++|++++++|+.|+++++++++|.|          .+||
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv  165 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence            999999999999999999977677777777           9999999999999999999999988          4799


Q ss_pred             EEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         186 IVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       186 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      ++||..+..+.+                +...|++||+++++|+++++.|++++||+||+|+||+++|+
T Consensus       166 ~isS~~~~~~~~----------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          166 NLCDAMTDLPLP----------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             EECCGGGGSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             EECchhhcCCCC----------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            999998876654                67899999999999999999999999999999999999999

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-35  Score=269.12  Aligned_cols=193  Identities=19%  Similarity=0.270  Sum_probs=164.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+.+...+...+..+.. +.++.+++||++|+++++++++++.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999887665544444443332 357999999999999999999999999


Q ss_pred             CCCccEEEECCC--CCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccc--cCCcCcCCCC
Q psy2854         133 YPKIHVLINNAG--VSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMD--RGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG--~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~--~~~~~~~~~~  203 (384)
                      ++++|+||||||  .....++.+.+.++|++++++|+.|++.+++.++|.|+     +||++||....  .+.+      
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~------  156 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI------  156 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCT------
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCC------
Confidence            999999999999  44446677889999999999999999999999999985     69999987432  2221      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                                +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...++
T Consensus       157 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  205 (264)
T 3i4f_A          157 ----------YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE  205 (264)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH
Confidence                      6679999999999999999999999999999999999999998776543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6.5e-36  Score=273.70  Aligned_cols=186  Identities=23%  Similarity=0.312  Sum_probs=161.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+|+ |+++||||++|||+++|++|+++|++|++++|+.+++++..+++...   .++.++++|++|+++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5677 99999999999999999999999999999999987777766665331   4788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|+      +||++||..+..+.+       
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~-------  166 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP-------  166 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT-------
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC-------
Confidence            99999999999998654 6777889999999999999999999999999873      799999998876544       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                               +...|++||+++++|+++++.|++++||+||+|+||+++|++.+
T Consensus       167 ---------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  210 (272)
T 2nwq_A          167 ---------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSL  210 (272)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchh
Confidence                     66789999999999999999999999999999999999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-35  Score=278.85  Aligned_cols=190  Identities=18%  Similarity=0.225  Sum_probs=169.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-------GQEALEKLKKEVQDGQIVLMELNLASFDSIKN  124 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~  124 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.  +.++.++++|++|++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHH
Confidence            56899999999999999999999999999999999999875       44555665543  5689999999999999999


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCc
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~  199 (384)
                      +++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+..  
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~--  196 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW--  196 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC--
Confidence            9999999999999999999998888888899999999999999999999999999985     699999988765521  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCc-ccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGW-CYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~-v~T~~~~~  258 (384)
                                  .++...|++||+|+++|+++++.|++ .||+||+|+||+ ++|++.+.
T Consensus       197 ------------~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~  243 (346)
T 3kvo_A          197 ------------FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM  243 (346)
T ss_dssp             ------------TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh
Confidence                        01677999999999999999999999 899999999995 99987543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.2e-35  Score=272.70  Aligned_cols=190  Identities=23%  Similarity=0.280  Sum_probs=165.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCC----HHHHH
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLAS----FDSIK  123 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~----~~~v~  123 (384)
                      +...++++|+++||||++|||+++|++|+++|++|++++|+. ++.++..+++.+.. +.++.++++|++|    +++++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHH
Confidence            334568999999999999999999999999999999999998 77777777775332 4678999999999    99999


Q ss_pred             HHHHHHHHhCCCccEEEECCCCCCCCCC-----CC-----CChhhHHHHhchhhhHHHHHHHHHHHhcC-----------
Q psy2854         124 NFAKNVMKQYPKIHVLINNAGVSVPIKE-----KL-----TTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------  182 (384)
Q Consensus       124 ~~~~~i~~~~g~id~lvnnAG~~~~~~~-----~~-----~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------  182 (384)
                      ++++++.+++|++|+||||||+....++     .+     .+.++|++++++|+.+++.+++.++|.|+           
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            9999999999999999999998766665     55     78899999999999999999999999873           


Q ss_pred             cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         183 KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       183 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +||++||..+..+.+                +...|++||+|+++|+++++.|++++||+||+|+||+++|++
T Consensus       175 ~iv~isS~~~~~~~~----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          175 SIVNLCDAMVDQPCM----------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             EEEEECCTTTTSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             EEEEEecccccCCCC----------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            699999998776544                678999999999999999999999999999999999999999

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-35  Score=269.09  Aligned_cols=184  Identities=21%  Similarity=0.264  Sum_probs=167.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987766655544     457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|.|+    +||++||..+..+.+           
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  146 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE-----------  146 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCC-----------
Confidence            99999999999997777788889999999999999999999999999985    699999998876554           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCC--CcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADK--GVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~--gI~v~~v~PG~v~T~~~~  257 (384)
                           +...|++||+++++++++++.|++++  ||+|++|+||+++|++.+
T Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~  192 (253)
T 1hxh_A          147 -----QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ  192 (253)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh
Confidence                 67799999999999999999999888  999999999999999753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3.4e-35  Score=270.23  Aligned_cols=190  Identities=17%  Similarity=0.132  Sum_probs=168.4

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        51 ~~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ..++++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..  .++.+++||++|++++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHH
Confidence            356889999999988  8899999999999999999999986  455666665553  3588999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCC----CCCCC-CChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCc
Q psy2854         129 VMKQYPKIHVLINNAGVSVP----IKEKL-TTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~  199 (384)
                      +.++++++|+||||||+...    .++.+ .+.++|++++++|+.+++++++.++|.|+    +||++||.++..+.+  
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--  174 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP--  174 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT--
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC--
Confidence            99999999999999998654    33344 78999999999999999999999999986    699999998877655  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                    +...|++||+|+++|+++++.|++++||+|++|+||+|+|++.+...
T Consensus       175 --------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          175 --------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             --------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred             --------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence                          77899999999999999999999999999999999999999987654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-35  Score=267.94  Aligned_cols=181  Identities=23%  Similarity=0.232  Sum_probs=163.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++ ++..+++    .  + .++++|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~----~--~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI----G--G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH----T--C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh----h--C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999876 5444433    1  4 77899999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+          
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------  144 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------  144 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----------
Confidence            99999999999997777788889999999999999999999999999874     699999998776654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  188 (256)
T 2d1y_A          145 ------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL  188 (256)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             ------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh
Confidence                  67799999999999999999999999999999999999998743

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-35  Score=276.45  Aligned_cols=187  Identities=22%  Similarity=0.251  Sum_probs=158.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-----hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-----IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.     +++++..+.+...  +.++.++++|++|+++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Confidence            46789999999999999999999999999999988763     3333333333332  5679999999999999999999


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCC
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+...    
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~----  155 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP----  155 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC----
Confidence            9999999999999999998778888889999999999999999999999999985     6999999987644321    


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                                 +...|++||+|+++++++++.|+++.||+|++|+||.++|++.
T Consensus       156 -----------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          156 -----------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                       5678999999999999999999999999999999999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.6e-35  Score=266.06  Aligned_cols=189  Identities=14%  Similarity=0.160  Sum_probs=167.3

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..  +.+.++++|++|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHH
Confidence            35789999999999  99999999999999999999999874 555566665543  23788999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+     
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  155 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-----  155 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-----
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC-----
Confidence            9999999999999998653    5667789999999999999999999999999985   799999988766544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 +...|++||+++++++++++.|++++||+||+|+||+++|++.+..
T Consensus       156 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  201 (261)
T 2wyu_A          156 -----------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI  201 (261)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc
Confidence                       6678999999999999999999999999999999999999987653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.6e-35  Score=268.27  Aligned_cols=179  Identities=21%  Similarity=0.296  Sum_probs=154.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++             .+.++++|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999865432             267889999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  154 (253)
T 2nm0_A           84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA---------  154 (253)
T ss_dssp             HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC---------
Confidence            999999999999997777777889999999999999999999999999874     799999988766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||++++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       155 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (253)
T 2nm0_A          155 -------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL  200 (253)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence                   6778999999999999999999999999999999999999997643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-35  Score=265.61  Aligned_cols=188  Identities=23%  Similarity=0.341  Sum_probs=149.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..+.++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ..++.++.+|++|.+++++++++  
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK--   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT--
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh--
Confidence            35789999999999999999999999999999999999987777665554     35788899999999998887754  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                        .+++|+||||||+....+..+.+.++|++++++|+.|++.+++.++|.|.     +||++||..+..+.+        
T Consensus        82 --~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  151 (249)
T 3f9i_A           82 --TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP--------  151 (249)
T ss_dssp             --CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS--------
T ss_pred             --cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC--------
Confidence              47899999999997777777788999999999999999999999999884     699999998877655        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF  263 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  263 (384)
                              +...|++||+|+++++++++.|++++||+|++|+||+++|++.+......
T Consensus       152 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~  201 (249)
T 3f9i_A          152 --------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ  201 (249)
T ss_dssp             --------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH
Confidence                    67899999999999999999999999999999999999999988766543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-35  Score=272.35  Aligned_cols=190  Identities=22%  Similarity=0.305  Sum_probs=160.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.... .+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999888777766663211 134688999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCC----ChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCccc-ccCCcCcCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLT----TKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLM-DRGTIDFDNL  202 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~----~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~-~~~~~~~~~~  202 (384)
                      ++|++|+||||||+....++.+.    +.++|++++++|+.|++++++.++|.|+    +||++||..+ ..+.+     
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  157 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP-----  157 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT-----
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCC-----
Confidence            99999999999998766666677    8999999999999999999999999873    7999999887 55443     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 +...|++||+++++++++++.|++++||+||+|+||+++|++...
T Consensus       158 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          158 -----------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence                       667899999999999999999999999999999999999998654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-35  Score=275.95  Aligned_cols=188  Identities=17%  Similarity=0.196  Sum_probs=167.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHH-----------
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFD-----------  120 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~-----------  120 (384)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++.... +.++.++++|++|++           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccc
Confidence            47899999999999999999999999999999999 99888888777775332 467899999999999           


Q ss_pred             ------HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCC--------------hhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         121 ------SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTT--------------KEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       121 ------~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                            +++++++++.+++|++|+||||||+....++.+.+              .++|++++++|+.|++.++++++|.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  99999999999999999999999997767777777              8999999999999999999999998


Q ss_pred             cC-----------cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecC
Q psy2854         181 IQ-----------KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPG  249 (384)
Q Consensus       181 l~-----------~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG  249 (384)
                      |.           +||++||..+..+.+                +...|++||+|+++|+++++.|++++||+||+|+||
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~----------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  265 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLL----------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG  265 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCC----------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            72           699999998776554                678999999999999999999999999999999999


Q ss_pred             cccCCcccc
Q psy2854         250 WCYTNLFRH  258 (384)
Q Consensus       250 ~v~T~~~~~  258 (384)
                      +|+|++ +.
T Consensus       266 ~v~T~~-~~  273 (328)
T 2qhx_A          266 LSVLVD-DM  273 (328)
T ss_dssp             SBSCCC-CS
T ss_pred             cccCCc-cc
Confidence            999999 44

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=7.8e-36  Score=272.33  Aligned_cols=178  Identities=23%  Similarity=0.304  Sum_probs=160.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+..+             ....+++|++|.++++++++++.+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999865322             123458999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+         
T Consensus        91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  161 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP---------  161 (266)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT---------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC---------
Confidence            999999999999998888888889999999999999999999999999985     699999998876655         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       162 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          162 -------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence                   778999999999999999999999999999999999999998643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.5e-35  Score=271.31  Aligned_cols=185  Identities=25%  Similarity=0.272  Sum_probs=167.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|.++++++++++.++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999999988776655432     457899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+          
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  146 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA----------  146 (281)
T ss_dssp             HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC----------
Confidence            99999999999997777888889999999999999999999999999885     799999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+++++++++++.|++++||+|++|+||+++|++...
T Consensus       147 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          147 ------GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence                  678999999999999999999999999999999999999999754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=7.6e-35  Score=265.82  Aligned_cols=188  Identities=14%  Similarity=0.156  Sum_probs=166.1

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+  ...++++|++|+++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHH
Confidence            4789999999999  9999999999999999999999987 55566666655532  34788999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCC----CCCCC-CChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVSVP----IKEKL-TTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      +++|++|+||||||+...    .++.+ .+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+     
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  157 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-----  157 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-----
Confidence            999999999999998653    45556 78999999999999999999999999985   799999988776544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 +...|++||+++++++++++.|++++||+||+|+||+++|++.+..
T Consensus       158 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  203 (265)
T 1qsg_A          158 -----------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI  203 (265)
T ss_dssp             -----------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc
Confidence                       6678999999999999999999999999999999999999987653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-35  Score=268.32  Aligned_cols=182  Identities=24%  Similarity=0.329  Sum_probs=162.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++..           ..++.++++|++|+++++++++++.++
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999865422           236889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+.         
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  164 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG---------  164 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT---------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC---------
Confidence            99999999999998778888889999999999999999999999999885     6999999876543221         


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           .+...|++||+|+++|+++++.|++++||+||+|+||+++|++....
T Consensus       165 -----~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  211 (260)
T 3un1_A          165 -----MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE  211 (260)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH
Confidence                 15578999999999999999999999999999999999999997643

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5.6e-35  Score=265.78  Aligned_cols=188  Identities=21%  Similarity=0.204  Sum_probs=167.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAK---LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~---~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ++++|+++||||++|||+++|++|++   +|++|++++|+.+++++..+++.+..++.++.++++|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   899999999999888888888766544567899999999999999999999


Q ss_pred             HH--hCCCcc--EEEECCCCCCC--CCCCC-CChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccC
Q psy2854         130 MK--QYPKIH--VLINNAGVSVP--IKEKL-TTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRG  195 (384)
Q Consensus       130 ~~--~~g~id--~lvnnAG~~~~--~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~  195 (384)
                      .+  .+|++|  +||||||+...  .++.+ .+.++|++++++|+.|+++++++++|.|+       +||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            98  778899  99999998543  45666 68999999999999999999999999984       3999999988766


Q ss_pred             CcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         196 TIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .+                +...|++||+|+++|+++++.|+++  |+||+|+||+++|+|.+.
T Consensus       163 ~~----------------~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~  207 (259)
T 1oaa_A          163 YK----------------GWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             CT----------------TCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHH
T ss_pred             CC----------------CccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHH
Confidence            54                6789999999999999999999963  999999999999998653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.9e-35  Score=267.54  Aligned_cols=188  Identities=22%  Similarity=0.267  Sum_probs=162.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++|+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.++++|++|+++++++++++.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            357999999999999999999999999999876 77777777776666543  568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +|++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|.        +||++||.++..+.+.     
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  176 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT-----  176 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-----
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-----
Confidence            9999999999998664 6777889999999999999999999999999975        4999999988765431     


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                ....|++||+|+++|+++++.|++++||+|++|+||+|+|++.+.
T Consensus       177 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          177 ----------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence                      456899999999999999999999999999999999999998754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=3.8e-35  Score=265.03  Aligned_cols=180  Identities=23%  Similarity=0.306  Sum_probs=154.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++             +..+++|++|+++++++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998654321             12388999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  148 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG---------  148 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC---------
Confidence            999999999999997767778889999999999999999999999999874     799999998776654         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||++++.|+++++.|++++||+||+|+||+++|++.+...
T Consensus       149 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  195 (247)
T 1uzm_A          149 -------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD  195 (247)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC
Confidence                   66789999999999999999999999999999999999999865443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-35  Score=268.00  Aligned_cols=184  Identities=23%  Similarity=0.389  Sum_probs=163.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++      .++.++++|++|+++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999976655544332      2478899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+    +||++||..+..+.+         
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  149 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA---------  149 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC---------
Confidence            99999999999998643 5677789999999999999999999999999874    799999988766654         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||+++++++++++.|++++||+||+|+||+++|++.+
T Consensus       150 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~  193 (270)
T 1yde_A          150 -------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWE  193 (270)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhh
Confidence                   66789999999999999999999999999999999999999854

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-34  Score=263.92  Aligned_cols=193  Identities=21%  Similarity=0.292  Sum_probs=169.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988777777666543  4578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +.++++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|.     +||++||..+..+.+        
T Consensus       117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  188 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV--------  188 (285)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--------
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC--------
Confidence            9999999999999997777778889999999999999999999999999874     799999998776654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                              +...|++||++++.++++++.|+++.||+|++|+||.++|++.+...+
T Consensus       189 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  236 (285)
T 2c07_A          189 --------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE  236 (285)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCH
Confidence                    677899999999999999999999999999999999999999766543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.5e-35  Score=265.18  Aligned_cols=185  Identities=24%  Similarity=0.347  Sum_probs=165.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     ..++.++++|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~~~   82 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKAID   82 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999976665544333     12678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc------CcEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l------~~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|      .+||++||..+..+.+        
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  154 (263)
T 3ak4_A           83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP--------  154 (263)
T ss_dssp             HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC--------
Confidence            99999999999998776777788999999999999999999999999986      3799999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||+++++++++++.|++++||+|++|+||+++|++.+
T Consensus       155 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  198 (263)
T 3ak4_A          155 --------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE  198 (263)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh
Confidence                    66789999999999999999999999999999999999999854

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.3e-34  Score=266.62  Aligned_cols=190  Identities=19%  Similarity=0.272  Sum_probs=168.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|.++++++++++ +
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            5688999999999999999999999999999999999988777766655     467999999999999999999999 8


Q ss_pred             hCCCccEEEEC-CCCCCCCCC-----CCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCccccc
Q psy2854         132 QYPKIHVLINN-AGVSVPIKE-----KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDR  194 (384)
Q Consensus       132 ~~g~id~lvnn-AG~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~  194 (384)
                      +++++|++||| ||+......     .+.+.++|++++++|+.+++++++.++|.+.           +||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            88999999999 666444433     3568899999999999999999999999873           699999999887


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHH
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF  263 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  263 (384)
                      +.+                +...|++||+|+++|+++++.|++++||+|++|+||+|+|++.+....+.
T Consensus       180 ~~~----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~  232 (281)
T 3ppi_A          180 GQI----------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA  232 (281)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH
T ss_pred             CCC----------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH
Confidence            655                77899999999999999999999999999999999999999987765433

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-35  Score=270.96  Aligned_cols=203  Identities=30%  Similarity=0.394  Sum_probs=167.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF-DSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~  130 (384)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|+ ++++++++++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999888888886652 45799999999998 99999999999


Q ss_pred             HhCCCccEEEECCCCCCC------------------------------CCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         131 KQYPKIHVLINNAGVSVP------------------------------IKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~------------------------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      +++|++|+||||||+...                              .++.+.+.+++++++++|+.|++++++.++|.
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999998632                              13445688999999999999999999999999


Q ss_pred             cC-----cEEEEcCcccccCCcCcC------------------------------CCCcCcCcccCCCChhhhhhcHHHH
Q psy2854         181 IQ-----KVVIVGSSLMDRGTIDFD------------------------------NLNGEKGFVQKGHSNPAYCNSKLMN  225 (384)
Q Consensus       181 l~-----~iv~vsS~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~Y~aSK~a~  225 (384)
                      |+     +||++||..+..+.....                              ......++   .++...|++||+|+
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~SK~a~  243 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW---PSFGAAYTTSKACL  243 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC---CSSCHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC---cccchhhHHHHHHH
Confidence            85     799999998876532100                              00000111   12557899999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       226 ~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      ++|+++++.|+.  +|+|++|+||+|+|+|.+...
T Consensus       244 ~~~~~~la~e~~--~i~v~~v~PG~v~T~~~~~~~  276 (311)
T 3o26_A          244 NAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGIG  276 (311)
T ss_dssp             HHHHHHHHHHCT--TSEEEEECCCSBCSGGGTTCC
T ss_pred             HHHHHHHHhhcC--CceEEEecCCceecCCcCCCC
Confidence            999999999985  499999999999999987643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.7e-34  Score=261.22  Aligned_cols=179  Identities=24%  Similarity=0.315  Sum_probs=156.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.         +   ...+..+++|++|+++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998652         1   11277889999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+         
T Consensus        71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------  141 (250)
T 2fwm_X           71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRI---------  141 (250)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC---------
Confidence            999999999999997777788889999999999999999999999999874     799999998876544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       142 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          142 -------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence                   677899999999999999999999999999999999999998654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-33  Score=257.99  Aligned_cols=200  Identities=24%  Similarity=0.258  Sum_probs=172.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++..+..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998777766666665543 45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.+.      +||++||..+..+.+...     
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-----  163 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-----  163 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-----
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc-----
Confidence            999999999999997777777889999999999999999999999999863      699999987765432100     


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                      .    ...+...|++||++++.++++++.|++++||+|++|+||+++|++.+...+
T Consensus       164 ~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  215 (265)
T 1h5q_A          164 N----GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK  215 (265)
T ss_dssp             T----EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH
T ss_pred             c----ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch
Confidence            0    011467899999999999999999999999999999999999999876543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-34  Score=257.20  Aligned_cols=186  Identities=23%  Similarity=0.343  Sum_probs=168.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA-------TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +|+++||||++|||++++++|+++|+       +|++++|+.++.++..+++...  +.++.++++|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999988777766666432  46789999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +.++++++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|.|+     +||++||..+..+.+      
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  153 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR------  153 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC------
Confidence            999999999999999997777777889999999999999999999999999873     799999998776544      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                +...|++||+++++++++++.|++++||+|++|+||+++|++.+..
T Consensus       154 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          154 ----------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence                      6678999999999999999999999999999999999999997653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.6e-34  Score=262.02  Aligned_cols=177  Identities=24%  Similarity=0.301  Sum_probs=162.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++             +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998654             24678899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+     +||++||..+..+.+         
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  141 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK---------  141 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC---------
Confidence            999999999999997777788889999999999999999999999999984     699999998776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+++++|+++++.|+++. |+||+|+||+++|++.+.
T Consensus       142 -------~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          142 -------NASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhh
Confidence                   67799999999999999999999988 999999999999998643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.2e-34  Score=261.18  Aligned_cols=176  Identities=20%  Similarity=0.178  Sum_probs=157.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++|+++||||++|||+++|++|++ .|++|++++|+.+.            ...++.++++|++|+++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            3678999999999999999999999 78999999987541            12457889999999999999996554  


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|+   +||++||..+..+.+            
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------  135 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP------------  135 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT------------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC------------
Confidence            78999999999998888888899999999999999999999999999986   699999998877655            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                          +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       136 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  181 (244)
T 4e4y_A          136 ----NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL  181 (244)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH
Confidence                7789999999999999999999999999999999999999987643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.6e-34  Score=264.30  Aligned_cols=184  Identities=15%  Similarity=0.130  Sum_probs=160.8

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++.   .+++.++. +.++.++++|++|+++++++++++.
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHH
Confidence            578999999999  99999999999999999999999987542   12232322 3467889999999999999999999


Q ss_pred             HhCC---CccEEEECCCCCC-----CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCc
Q psy2854         131 KQYP---KIHVLINNAGVSV-----PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       131 ~~~g---~id~lvnnAG~~~-----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~  199 (384)
                      +++|   ++|+||||||+..     ..++.+.+.++|++++++|+.++++++++++|+|+   +||++||... .+.+  
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~--  156 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMP--  156 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCT--
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccC--
Confidence            9999   9999999999865     35677789999999999999999999999999986   7999998764 3322  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                    .+..|++||+++++|+++++.|++++||+||+|+||+++|++.+
T Consensus       157 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  200 (269)
T 2h7i_A          157 --------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS  200 (269)
T ss_dssp             --------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHH
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhh
Confidence                          66789999999999999999999999999999999999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=5.7e-34  Score=256.04  Aligned_cols=178  Identities=23%  Similarity=0.312  Sum_probs=158.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||+++|++|+++|++|++++|+.++   ..+++     +  +..+++|++| ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999765   22222     2  6788999999 9999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|+     +||++||..+..+..             
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-------------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------------
Confidence            99999999997777788889999999999999999999999999874     799999998776541             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                       .++...|++||+++++++++++.|++++||+||+|+||+++|++.+.
T Consensus       138 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  184 (239)
T 2ekp_A          138 -PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLP  184 (239)
T ss_dssp             -TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhc
Confidence             01667999999999999999999999999999999999999998653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-34  Score=262.60  Aligned_cols=188  Identities=29%  Similarity=0.367  Sum_probs=169.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988887777777554  45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|+||||||+....++.+.+.+++++++++|+.|++.+++.++|.|.     +||++||..+..+.+         
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  175 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---------  175 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH---------
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC---------
Confidence            999999999999997767777778899999999999999999999999874     799999998776544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYA---DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~---~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||++++.++++++.|++   +.||+|++|+||+++|++.+
T Consensus       176 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          176 -------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence                   677899999999999999999997   67999999999999999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.3e-34  Score=258.62  Aligned_cols=180  Identities=19%  Similarity=0.208  Sum_probs=153.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+.   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999987766655544     457888999999999999998877543   4


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      |+||||||+....++.+.+.++|++++++|+.|++++++.++|.|+    +||++||..+..+.+               
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------  138 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA---------------  138 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT---------------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC---------------
Confidence            9999999998778888889999999999999999999999999986    699999998876654               


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                       +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+...
T Consensus       139 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          139 -QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence             67899999999999999999999999999999999999999987544

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-33  Score=259.55  Aligned_cols=192  Identities=18%  Similarity=0.226  Sum_probs=169.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.....++.++++|++|+++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988887777777654323568889999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|.|+       +||++||..+....+      
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~------  180 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP------  180 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS------
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC------
Confidence            9999999999999997777777889999999999999999999999998873       699999987753211      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCcc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~  256 (384)
                              .++...|++||++++.++++++.|++  +.||+|++|+||+++|++.
T Consensus       181 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          181 --------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA  227 (279)
T ss_dssp             --------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh
Confidence                    01667899999999999999999998  8899999999999999984

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.1e-33  Score=257.16  Aligned_cols=190  Identities=22%  Similarity=0.295  Sum_probs=168.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777777776543  45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|.     +||++||..+..+.+.       
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  159 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP-------  159 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC-------
Confidence            9999999999999866 56677789999999999999999999999999863     6999999877655431       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             .+...|++||++++.++++++.|++++||+|++|+||+++|++.+
T Consensus       160 -------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          160 -------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             -------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             -------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence                   023789999999999999999999999999999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=5.7e-34  Score=270.59  Aligned_cols=188  Identities=11%  Similarity=-0.027  Sum_probs=160.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhHHH------------HHHHHHHHhcCCcEEEEEeecCCHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQE------------ALEKLKKEVQDGQIVLMELNLASFDS  121 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~Dvs~~~~  121 (384)
                      .+|+||||||++|||+++|+.|++ +|++|++++|+.+..++            ..+++.+.  +.++..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            489999999999999999999999 99999999998765432            12333332  5678899999999999


Q ss_pred             HHHHHHHHHHhC-CCccEEEECCCCC-------------CCCCC---------------------CCCChhhHHHHhchh
Q psy2854         122 IKNFAKNVMKQY-PKIHVLINNAGVS-------------VPIKE---------------------KLTTKEGYEVHFGIN  166 (384)
Q Consensus       122 v~~~~~~i~~~~-g~id~lvnnAG~~-------------~~~~~---------------------~~~~~~~~~~~~~vN  166 (384)
                      ++++++++.+++ |++|+||||||+.             ...++                     .+.++++|++++++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999972             22333                     357899999999999


Q ss_pred             hhHHH-HHHHHHHHh-cC----cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh--hhhhhcHHHHHHHHHHHHHHhCC
Q psy2854         167 HVGHF-LLTNLLIER-IQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN--PAYCNSKLMNYYFGAELYLKYAD  238 (384)
Q Consensus       167 ~~~~~-~l~~~~~~~-l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~aSK~a~~~~~~~la~e~~~  238 (384)
                      ..+.+ .+++.+.+. |.    +||++||..+..+.+                .+  .+|++||+|+.+|+++|+.|+++
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p----------------~~~~~aY~ASKaAl~~lTrsLA~Ela~  281 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP----------------IYWHGALGKAKVDLDRTAQRLNARLAK  281 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH----------------HHTSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC----------------CccchHHHHHHHHHHHHHHHHHHHhCc
Confidence            99997 788887654 42    799999998876654                44  78999999999999999999999


Q ss_pred             CCcEEEEEecCcccCCccccCc
Q psy2854         239 KGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       239 ~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      +|||||+|+||+|+|++....+
T Consensus       282 ~GIRVNaVaPG~i~T~~~~~ip  303 (422)
T 3s8m_A          282 HGGGANVAVLKSVVTQASAAIP  303 (422)
T ss_dssp             TTCEEEEEEECCCCCTTGGGST
T ss_pred             cCEEEEEEEcCCCcChhhhcCC
Confidence            9999999999999999987664

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.2e-33  Score=264.07  Aligned_cols=189  Identities=9%  Similarity=-0.057  Sum_probs=160.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhHH-----------HHHH-HHHHHhcCCcEEEEEeecCCHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQ-----------EALE-KLKKEVQDGQIVLMELNLASFD  120 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~r~~~~~~-----------~~~~-~l~~~~~~~~~~~~~~Dvs~~~  120 (384)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+           +..+ ++.+.  +.++..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHH
Confidence            4689999999999999999999999 9999999998765432           1222 33332  567889999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCC-------------CCCCC---------------------CCCChhhHHHHhchh
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVS-------------VPIKE---------------------KLTTKEGYEVHFGIN  166 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~-------------~~~~~---------------------~~~~~~~~~~~~~vN  166 (384)
                      +++++++++.+++|++|+||||||+.             ...++                     .+.++++|++++++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            99999999999999999999999984             22344                     667999999999999


Q ss_pred             hhHHH-HHHHHHHH-hcC----cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh--hhhhhcHHHHHHHHHHHHHHhCC
Q psy2854         167 HVGHF-LLTNLLIE-RIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN--PAYCNSKLMNYYFGAELYLKYAD  238 (384)
Q Consensus       167 ~~~~~-~l~~~~~~-~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~aSK~a~~~~~~~la~e~~~  238 (384)
                      ..+.+ .+++.+.+ .|.    +||++||..+..+.+                .+  .+|++||+|+.+++++|+.|+++
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p----------------~~~~~aY~AaKaal~~ltrsLA~Ela~  266 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD----------------IYWNGSIGAAKKDLDQKVLAIRESLAA  266 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT----------------TTTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC----------------CccchHHHHHHHHHHHHHHHHHHHhCc
Confidence            99998 78888765 443    799999998877655                44  78999999999999999999999


Q ss_pred             C-CcEEEEEecCcccCCccccCc
Q psy2854         239 K-GVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       239 ~-gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      + |||||+|+||.+.|++....+
T Consensus       267 ~~GIRVNaVaPG~i~T~~s~~ip  289 (405)
T 3zu3_A          267 HGGGDARVSVLKAVVSQASSAIP  289 (405)
T ss_dssp             TTSCEEEEEECCCCCCHHHHTST
T ss_pred             ccCeEEEEEEeCCCcCchhhcCC
Confidence            9 999999999999999987654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.1e-34  Score=257.97  Aligned_cols=190  Identities=22%  Similarity=0.324  Sum_probs=151.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++||||++|||++++++|+++|++|+++ .|+.++.++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 67777777766666543  46789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      .++++|+||||||+....++.+.+.+++++.+++|+.+++++++.++|.|+     +||++||..+..+.+         
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  150 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA---------  150 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---------
Confidence            999999999999987666677778899999999999999999999999874     799999987766544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             +...|++||++++.++++++.|+++.||+|++++||+++|++.+...
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  197 (247)
T 2hq1_A          151 -------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP  197 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             -------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc
Confidence                   66789999999999999999999999999999999999999865543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=6.9e-34  Score=259.22  Aligned_cols=187  Identities=24%  Similarity=0.309  Sum_probs=163.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988777665554     45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCC------CCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCccccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEK------LTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDR  194 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~  194 (384)
                      +++++|+||||||+....+..      +.+.++|++++++|+.+++.+++.+.|.|+           +||++||..+..
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            999999999999986655443      368899999999999999999999999862           599999988776


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                      +.+                +...|++||++++.++++++.|++++||+|++|+||+++|++.+..
T Consensus       163 ~~~----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  211 (265)
T 2o23_A          163 GQV----------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL  211 (265)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred             CCC----------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence            554                6778999999999999999999999999999999999999987643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.6e-34  Score=255.41  Aligned_cols=187  Identities=22%  Similarity=0.343  Sum_probs=167.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ||+++||||++|||++++++|+++|++|++ .+|+.++.++..+++...  +.++.++++|++|+++++++++++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999998 488887777776666543  45788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|.     +||++||..+..+.+            
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  146 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------------  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC------------
Confidence            999999999997777777789999999999999999999999999873     799999988766554            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                          +...|++||++++.++++++.|++++||+|++|+||+++|++.+...
T Consensus       147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  193 (244)
T 1edo_A          147 ----GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG  193 (244)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             ----CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC
Confidence                66789999999999999999999999999999999999999876544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=9.7e-34  Score=257.72  Aligned_cols=189  Identities=28%  Similarity=0.363  Sum_probs=169.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++++|+++||||++|||++++++|+++|++|++++| +.++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777766666666543  4578899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc------CcEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l------~~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|.|      .+||++||..+..+.+       
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  153 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP-------  153 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC-------
Confidence            999999999999999776677778999999999999999999999999986      2799999987765543       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +...|++||++++.++++++.|++++||+|++|+||+++|++.+.
T Consensus       154 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  198 (261)
T 1gee_A          154 ---------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh
Confidence                     677999999999999999999999999999999999999998653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=6.4e-34  Score=259.68  Aligned_cols=189  Identities=20%  Similarity=0.237  Sum_probs=154.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777776553  45788999999999999999999999


Q ss_pred             hC-CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~-g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      .+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|+     +||++||..+..+.+        
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  159 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS--------  159 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC--------
Confidence            98 8999999999987767777889999999999999999999999998874     799999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||++++.++++++.|++++||+|++|+||++.|++.+.
T Consensus       160 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (266)
T 1xq1_A          160 --------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA  204 (266)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhh
Confidence                    567899999999999999999999999999999999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=9.1e-34  Score=256.34  Aligned_cols=189  Identities=28%  Similarity=0.327  Sum_probs=168.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++..   ..++.++++|++|+++++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998776665555422   25789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|.|+      +||++||..+..+.+        
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  150 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------  150 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT--------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC--------
Confidence            999999999999997777777889999999999999999999999999874      699999988776554        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              +...|++||++++.++++++.|+.  +.||++++|+||+++|++.+..
T Consensus       151 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~  198 (251)
T 1zk4_A          151 --------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred             --------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc
Confidence                    677999999999999999999988  8899999999999999987643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.1e-33  Score=256.61  Aligned_cols=191  Identities=22%  Similarity=0.280  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+ .++.++..+++...  +.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 77777777776553  4678999999999999999999999


Q ss_pred             HhCCCccEEEECCCC-CCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----------CcEEEEcCccccc-CCcC
Q psy2854         131 KQYPKIHVLINNAGV-SVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----------QKVVIVGSSLMDR-GTID  198 (384)
Q Consensus       131 ~~~g~id~lvnnAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----------~~iv~vsS~~~~~-~~~~  198 (384)
                      ++++++|+||||||. ....++.+.+.+++++++++|+.+++.+++.++|.|          .+||++||..+.. +.+ 
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  159 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP-  159 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT-
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC-
Confidence            999999999999997 555667778999999999999999999999999876          4689999987765 433 


Q ss_pred             cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         199 FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                     +...|++||++++.++++++.|++++||+|++|+||+++|++.+...
T Consensus       160 ---------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~  206 (258)
T 3afn_B          160 ---------------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT  206 (258)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC
Confidence                           66789999999999999999999999999999999999999976543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.6e-33  Score=257.54  Aligned_cols=190  Identities=19%  Similarity=0.253  Sum_probs=166.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999988777666655443  467889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCC-CCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccC--CcCcCCCC
Q psy2854         133 YPKIHVLINNAGVSVP-IKEK-LTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRG--TIDFDNLN  203 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~--~~~~~~~~  203 (384)
                      +|++|+||||||+... .++. +.+.++|++++++|+.|++.+++.++|.++     +||++||..+..+  .+      
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  182 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQ------  182 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---C------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCC------
Confidence            9999999999998665 5565 678899999999999999999999999874     7999999887654  22      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                                +...|++||++++.++++++.|++++| +|++|+||+++|++.+....
T Consensus       183 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~  229 (279)
T 3ctm_A          183 ----------LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK  229 (279)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH
T ss_pred             ----------CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh
Confidence                      678999999999999999999999999 99999999999999865443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.5e-34  Score=289.87  Aligned_cols=185  Identities=23%  Similarity=0.292  Sum_probs=162.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM---------IRGQEALEKLKKEVQDGQIVLMELNLASFDSI  122 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v  122 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.         +++++..+++.+.  +.+.   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            357899999999999999999999999999999998765         5566666666543  2332   4699999889


Q ss_pred             HHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCc
Q psy2854         123 KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTI  197 (384)
Q Consensus       123 ~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~  197 (384)
                      +++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||.++..+.+
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999997777888899999999999999999999999999995     699999998877765


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                      +...|++||+|+.+|+++|+.|++++||+||+|+|| ++|+|...
T Consensus       159 ----------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          159 ----------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc
Confidence                            778999999999999999999999999999999998 68988654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.5e-33  Score=254.39  Aligned_cols=191  Identities=25%  Similarity=0.329  Sum_probs=171.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|+++++++++++.++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999888777766665432 457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||.....++.+.+.+++++.+++|+.+++++++.++|.++     +||++||..+..+.+          
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  152 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV----------  152 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC----------
Confidence            99999999999987766777789999999999999999999999998874     799999987766544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                            +...|++||++++.++++++.|+++.||++++++||+++|++.+...
T Consensus       153 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~  199 (248)
T 2pnf_A          153 ------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS  199 (248)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc
Confidence                  66789999999999999999999999999999999999999876544

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-33  Score=255.63  Aligned_cols=186  Identities=23%  Similarity=0.273  Sum_probs=164.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|+++++++++++.+++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999877776665552211 357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCC---CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         136 IHVLINNAGVSVPIK---EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       136 id~lvnnAG~~~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|+||||||+....+   +.+.+.+++++++++|+.+++.+++.++|.|+     +||++||..+..+.+          
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  150 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP----------  150 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------
Confidence            999999999865555   66778999999999999999999999999873     799999988776544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||++++.++++++.|++++||+|++|+||+++|++.+.
T Consensus       151 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          151 ------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence                  677899999999999999999999999999999999999998653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-34  Score=258.65  Aligned_cols=176  Identities=14%  Similarity=0.038  Sum_probs=158.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||||++|||+++|++|+++|++|++++|+.++.+            ....++++|++|+++++++++++.+++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999876432            235678899999999999999999998


Q ss_pred             --CCccEEEECCCCCCCCCC-CCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         134 --PKIHVLINNAGVSVPIKE-KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       134 --g~id~lvnnAG~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                        +++|+||||||+....++ .+.+.++|++++++|+.+++.+++.++|.|+   +||++||..+..+.+          
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------  138 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP----------  138 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC----------
Confidence              799999999998766666 6778899999999999999999999999985   799999998876544          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++|+++++.|++  ++||+|++|+||+++|++.+
T Consensus       139 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~  184 (236)
T 1ooe_A          139 ------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR  184 (236)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH
T ss_pred             ------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh
Confidence                  678999999999999999999998  89999999999999999864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.8e-34  Score=258.06  Aligned_cols=191  Identities=18%  Similarity=0.257  Sum_probs=165.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-----cCCcEEEEEeecCCHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-----QDGQIVLMELNLASFDSIKNFA  126 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dvs~~~~v~~~~  126 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+..     +..++.++++|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999999877766655553321     1146888999999999999999


Q ss_pred             HHHHHhCCCc-cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCc
Q psy2854         127 KNVMKQYPKI-HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       127 ~~i~~~~g~i-d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~  199 (384)
                      +++.+++|++ |+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.      +||++||..+..+.+  
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  160 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV--  160 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT--
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC--
Confidence            9999999999 9999999997777777889999999999999999999999999863      699999987766554  


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                    +...|++||++++.++++++.|++++||+|++|+||+++|++.+.
T Consensus       161 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          161 --------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             --------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence                          678999999999999999999999999999999999999998653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=9.5e-35  Score=273.33  Aligned_cols=189  Identities=14%  Similarity=0.220  Sum_probs=158.5

Q ss_pred             CCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCch---------hHHHHHHHHHH-HhcCCcEEEEEeecCCH--H
Q psy2854          55 EGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMI---------RGQEALEKLKK-EVQDGQIVLMELNLASF--D  120 (384)
Q Consensus        55 ~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~---------~~~~~~~~l~~-~~~~~~~~~~~~Dvs~~--~  120 (384)
                      ++|++|||||++  |||+++|++|+++|++|++++|+..         +++...+.... ......+..++||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            378999999986  9999999999999999998877642         11111111110 00123478899999988  8


Q ss_pred             ------------------HHHHHHHHHHHhCCCccEEEECCCCC--CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         121 ------------------SIKNFAKNVMKQYPKIHVLINNAGVS--VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       121 ------------------~v~~~~~~i~~~~g~id~lvnnAG~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                                        +++++++++.+++|++|+||||||+.  ...++.+.+.++|++++++|+.|+++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999984  3567788899999999999999999999999999


Q ss_pred             cC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChh-hhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCc
Q psy2854         181 IQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP-AYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       181 l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~T~~  255 (384)
                      |+   +||++||.++..+.+                +.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|
T Consensus       161 m~~~g~Iv~isS~~~~~~~~----------------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~  224 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVP----------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCT----------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred             HhhCCeEEEEeCccccCCCC----------------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence            97   699999998877655                553 8999999999999999999998 89999999999999999


Q ss_pred             cccC
Q psy2854         256 FRHA  259 (384)
Q Consensus       256 ~~~~  259 (384)
                      .+..
T Consensus       225 ~~~~  228 (329)
T 3lt0_A          225 ATAI  228 (329)
T ss_dssp             HHTC
T ss_pred             Hhhh
Confidence            7654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=3.1e-33  Score=253.37  Aligned_cols=188  Identities=22%  Similarity=0.342  Sum_probs=168.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777776543  45788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +++++|+||||||.....++ +.+.++|++.+++|+.+++++++.++|.|+     +||++||..+..+.+         
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  154 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI---------  154 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT---------
T ss_pred             hcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC---------
Confidence            99999999999998766555 678999999999999999999999998874     699999988765543         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||++++.++++++.|++++||++++++||++.|++.+.
T Consensus       155 -------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          155 -------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence                   667899999999999999999999999999999999999998654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-33  Score=252.04  Aligned_cols=182  Identities=24%  Similarity=0.214  Sum_probs=155.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+|+++||||++|||++++++|+++|++|++++|+.++.++..+++      .++.++++|++|+++++++++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999976655544332      2678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++|+||||||+....++.+.+.++|++.+++|+.|++.+++.++|.|+     +||++||..+..+.+            
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  145 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK------------  145 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC------------
Confidence            999999999987767777889999999999999999999999999874     699999988765543            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          +...|++||++++.++++++.|++++||++++|+||+++|++.+.
T Consensus       146 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          146 ----GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence                667899999999999999999999999999999999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.2e-33  Score=264.24  Aligned_cols=185  Identities=18%  Similarity=0.335  Sum_probs=163.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE---------ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLG---------CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSI  122 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v  122 (384)
                      .+++||+++||||++|||+++|++|+++|++|++.         +|+.++.++..+++...  +..   ..+|++|.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHHHH
Confidence            46889999999999999999999999999999996         45677777777777553  222   35899999999


Q ss_pred             HHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCc
Q psy2854         123 KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTI  197 (384)
Q Consensus       123 ~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~  197 (384)
                      +++++++.+++|++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|+     +||++||..+..+.+
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~  159 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  159 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC
Confidence            999999999999999999999997766777889999999999999999999999999884     799999988776654


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                      +...|++||+|+++|+++++.|++++||+||+|+||.+ |++.+.
T Consensus       160 ----------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          160 ----------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred             ----------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence                            67799999999999999999999999999999999998 888654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8e-34  Score=256.17  Aligned_cols=179  Identities=20%  Similarity=0.266  Sum_probs=155.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++.. +    .  .++.++++|++|+++++    ++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~----~--~~~~~~~~D~~~~~~~~----~~~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K----Y--PGIQTRVLDVTKKKQID----QFANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G----S--TTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h----c--cCceEEEeeCCCHHHHH----HHHHH
Confidence            578999999999999999999999999999999999875544322 1    1  26888999999999888    44556


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+.         
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  142 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV---------  142 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT---------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC---------
Confidence            78999999999997777778889999999999999999999999999874     7999999877654321         


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++++||+|++|+||+++|++.+
T Consensus       143 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  186 (246)
T 2ag5_A          143 ------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ  186 (246)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh
Confidence                  45689999999999999999999999999999999999999854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.5e-33  Score=252.97  Aligned_cols=186  Identities=20%  Similarity=0.266  Sum_probs=164.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcE-EEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI-VLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++ .++++|++|+++++++++++.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987766655554     2356 889999999999999999998


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      + ++++|+||||||+....+..+.+.+++++++++|+.|++.+++.++|.++     +||++||..+..+.+.       
T Consensus        82 ~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  153 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP-------  153 (254)
T ss_dssp             H-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-------
T ss_pred             h-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC-------
Confidence            8 89999999999997777778889999999999999999999999999874     7999999887655431       


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             .+...|++||++++.++++++.|++++||++++|+||+++|++.+
T Consensus       154 -------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~  198 (254)
T 2wsb_A          154 -------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL  198 (254)
T ss_dssp             -------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh
Confidence                   023789999999999999999999999999999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=4.2e-33  Score=272.00  Aligned_cols=187  Identities=25%  Similarity=0.323  Sum_probs=161.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+..  .+..+++.+..   ...+++||++|.++++++++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~--~~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA--AEDLKRVADKV---GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG--HHHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc--HHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998743  22223332322   356899999999999999999999


Q ss_pred             hCCC-ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPK-IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~-id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++++ +|+||||||+....++.+.+.++|++++++|+.|++++++.+.|.|.     +||++||.++..+.+        
T Consensus       284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~--------  355 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR--------  355 (454)
T ss_dssp             HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT--------
T ss_pred             HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC--------
Confidence            9986 99999999998888888899999999999999999999999999864     799999999887765        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              ++..|++||+++++|+++++.|++++||+||+|+||+++|+|.+..
T Consensus       356 --------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          356 --------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence                    7789999999999999999999999999999999999999998654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4.8e-34  Score=256.85  Aligned_cols=176  Identities=13%  Similarity=0.061  Sum_probs=158.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .++|+++||||++|||+++|++|+++|++|++++|+.++.+            ....++++|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999875432            235678899999999999999999998


Q ss_pred             --CCccEEEECCCCCCCCCC-CCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         134 --PKIHVLINNAGVSVPIKE-KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       134 --g~id~lvnnAG~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                        +++|+||||||+....++ .+.+.++|++++++|+.+++.++++++|.|+   +||++||..+..+.+          
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  142 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------  142 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----------
Confidence              799999999998766666 6778899999999999999999999999985   799999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +...|++||+++++++++++.|++  ++||+||+|+||+++|++.+
T Consensus       143 ------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~  188 (241)
T 1dhr_A          143 ------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR  188 (241)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc
Confidence                  678999999999999999999999  89999999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=5.1e-34  Score=257.13  Aligned_cols=174  Identities=14%  Similarity=0.134  Sum_probs=154.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-e--cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLG-C--RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ||+++||||++|||+++|++|+++|++|+++ +  |+.+++++..+++    .+       +|+.|+++++++++++.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9877666554443    11       3445888899999999999


Q ss_pred             CCCccEEEECCCCCCC---CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         133 YPKIHVLINNAGVSVP---IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +|++|+||||||+...   .++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+       
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------  142 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA-------  142 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-------
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC-------
Confidence            9999999999999776   7788889999999999999999999999999984     699999998876654       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                               +...|++||+++++|+++++.|++++||+||+|+||+++|++.
T Consensus       143 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          143 ---------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ---------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence                     6678999999999999999999999999999999999999997

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=6.8e-34  Score=267.07  Aligned_cols=186  Identities=20%  Similarity=0.232  Sum_probs=157.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH----hcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE----VQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++.++..+.+...    ..+.++.++++|++|.++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            3789999999999999999999999999998888765554433333221    11357899999999999999999988 


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                       .++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||..+..+.+        
T Consensus        80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~--------  150 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP--------  150 (327)
T ss_dssp             -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT--------
T ss_pred             -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC--------
Confidence             358999999999997777777889999999999999999999999999884     699999998876654        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              ....|++||+++++|+++++.|++++||+|++|+||+|+|+|.+.
T Consensus       151 --------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          151 --------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence                    667899999999999999999999999999999999999999764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.5e-33  Score=255.60  Aligned_cols=180  Identities=24%  Similarity=0.250  Sum_probs=158.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF-DSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~  130 (384)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++.++++|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            478999999999999999999999999996 9999998642  3445555554456789999999998 99999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++++++|+||||||+.        +.+++++++++|+.|+++++++++|.|.        +||++||.++..+.+     
T Consensus        80 ~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  146 (254)
T 1sby_A           80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----  146 (254)
T ss_dssp             HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----
T ss_pred             HhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-----
Confidence            9999999999999973        4578999999999999999999999884        399999998876554     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 +...|++||+++++++++++.|+.++||+|++|+||+++|++.+.
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          147 -----------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence                       677999999999999999999998889999999999999998654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.6e-34  Score=285.94  Aligned_cols=184  Identities=24%  Similarity=0.325  Sum_probs=160.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++.+|.  ..++..+++.+.  +.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            36889999999999999999999999999999998864  234555666543  456777888884  556788999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||.++..+.+         
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~---------  462 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF---------  462 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---------
Confidence            999999999999998777888899999999999999999999999999994     699999998877665         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             +...|++||+|+.+|+++|+.|++++||+||+|+||. +|+|.+.
T Consensus       463 -------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~  506 (604)
T 2et6_A          463 -------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS  506 (604)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc
Confidence                   7789999999999999999999999999999999995 9998754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.6e-33  Score=258.13  Aligned_cols=189  Identities=18%  Similarity=0.236  Sum_probs=168.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|+++++++++++.+
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999888887777776543 45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.+++++++++|+.|++.+++.++|.+.      +||++||..+..+.+        
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  172 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------  172 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC--------
Confidence            999999999999987667777789999999999999999999999999873      699999987766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC-ccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN-LFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~-~~~  257 (384)
                              +...|++||++++.++++++.|++++||+|++|+||.++|+ +.+
T Consensus       173 --------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  217 (302)
T 1w6u_A          173 --------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS  217 (302)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence                    66789999999999999999999999999999999999998 443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.1e-33  Score=251.82  Aligned_cols=187  Identities=21%  Similarity=0.283  Sum_probs=166.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEE-EEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVL-MELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +|+++||||++|||++++++|+++|++|+++ +|+.++.++..+++...  +.++.. +.+|++|.++++++++++.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999998 89888777766666543  345666 8999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      +++|+||||||+....++.+.+.+++++++++|+.|++++++.++|.|+     +||++||..+..+.+           
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  147 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP-----------  147 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------
Confidence            9999999999997767777889999999999999999999999999874     799999987766544           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                           +...|++||++++.++++++.|++++||++++|+||+++|++.+...
T Consensus       148 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  194 (245)
T 2ph3_A          148 -----GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP  194 (245)
T ss_dssp             -----SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC
Confidence                 66789999999999999999999999999999999999999876543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=3.2e-33  Score=248.45  Aligned_cols=166  Identities=17%  Similarity=0.183  Sum_probs=149.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh---
Confidence            578999999999999999999999999999999999753                      8999999999988765   


Q ss_pred             CCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                       +++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|+   +||++||..+..+.+           
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  125 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA-----------  125 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT-----------
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC-----------
Confidence             8999999999986 456778889999999999999999999999999987   699999998876654           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK  262 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  262 (384)
                           +...|++||+++++|+++++.|+++  |+||+|+||+++|++.+.....
T Consensus       126 -----~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~  172 (223)
T 3uce_A          126 -----NTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD  172 (223)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh
Confidence                 6789999999999999999999987  9999999999999998776543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-33  Score=257.22  Aligned_cols=187  Identities=22%  Similarity=0.401  Sum_probs=167.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV---QDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++....   .+.++.++++|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888888777776521   245789999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-C----cEEEEcCcccccCCcCcCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-Q----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.+ +    +||++||.. ..+.+      
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~------  166 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP------  166 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC------
Confidence            99999999999999998766677778999999999999999999999999954 2    699999987 44433      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                                ....|++||+++++++++++.|++++||+|++|+||+++|++
T Consensus       167 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          167 ----------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             ----------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence                      667899999999999999999999999999999999999995

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.6e-34  Score=259.21  Aligned_cols=177  Identities=14%  Similarity=0.030  Sum_probs=156.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+..+|+++||||++|||+++|++|+++|++|++++|+.++.+              ...+.+|++|.++++++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999975422              13578999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCC-CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIK-EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++|++|+||||||+....+ ..+.+.++|++++++|+.|++.++++++|.|+   +||++||..+..+.+          
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------  153 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS----------  153 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC----------
Confidence            9999999999999866654 56678899999999999999999999999986   699999998876654          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            +...|++||+|++.++++++.|++  ++||+|++|+||+++|++.+.
T Consensus       154 ------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~  200 (251)
T 3orf_A          154 ------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK  200 (251)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh
Confidence                  778999999999999999999987  899999999999999998643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=7.6e-33  Score=255.36  Aligned_cols=187  Identities=21%  Similarity=0.208  Sum_probs=165.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||+||||++++++|+++|++|++++|+.+++++..+++.+. +..++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777776554 234788999999999999999999999


Q ss_pred             hCCCccEEEEC-CCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINN-AGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnn-AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+|||| ||+.. .+..+.+.+++++++++|+.|++.++++++|.|+    +||++||.++..+.+         
T Consensus       103 ~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  172 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP---------  172 (286)
T ss_dssp             HHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT---------
T ss_pred             HcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC---------
Confidence            99999999999 67643 3445568999999999999999999999999874    799999998776554         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCcc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKY--ADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~--~~~gI~v~~v~PG~v~T~~~  256 (384)
                             +...|++||+++++++++++.|+  ...||+|++|+||+++|++.
T Consensus       173 -------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~  217 (286)
T 1xu9_A          173 -------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA  217 (286)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH
Confidence                   67799999999999999999999  67899999999999999874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1e-32  Score=253.29  Aligned_cols=190  Identities=21%  Similarity=0.281  Sum_probs=166.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++..   ..++.++++|++|+++++++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999987666555444421   23789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      +++++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.     +||++||..+..+.+.      
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------  162 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG------  162 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT------
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC------
Confidence            99999999999998643  4667778999999999999999999999999874     7999999887655321      


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +...|++||++++.++++++.|++++||+|++|+||+++|++.+..
T Consensus       163 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          163 ---------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh
Confidence                     4568999999999999999999999999999999999999997654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-33  Score=255.11  Aligned_cols=181  Identities=24%  Similarity=0.393  Sum_probs=159.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+...+.++.++++|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988777666666443223568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      |++|+||||||+.        +.++|++.+++|+.+++.+++.++|.|+        +||++||..+..+.+        
T Consensus        85 g~id~lv~~Ag~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  148 (267)
T 2gdz_A           85 GRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA--------  148 (267)
T ss_dssp             SCCCEEEECCCCC--------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCC--------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC--------
Confidence            9999999999974        2467899999999999999999999874        599999998876544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHH--HHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAEL--YLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~l--a~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                              +...|++||++++++++++  +.|+++.||+||+|+||+++|++.+.
T Consensus       149 --------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          149 --------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence                    6678999999999999995  68899999999999999999998654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.3e-33  Score=254.38  Aligned_cols=178  Identities=16%  Similarity=0.146  Sum_probs=156.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||+++|++|+++|++|++++|+.++.++..+ +...  +.++..+     |+++++++++++.+++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999887776554 5443  3444433     6778899999999999999


Q ss_pred             cEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         137 HVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       137 d~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      |+||||||+. ...++.+.+.++|++++++|+.|+++++++++|.|+     +||++||..+..+.+             
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  140 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK-------------  140 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT-------------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC-------------
Confidence            9999999987 566777889999999999999999999999999884     799999998876654             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc---------cCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC---------YTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v---------~T~~~~~  258 (384)
                         +...|++||+++++|+++++.|++++||+||+|+||++         +|++.+.
T Consensus       141 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~  194 (254)
T 1zmt_A          141 ---ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT  194 (254)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc
Confidence               67799999999999999999999999999999999999         8887654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1e-32  Score=252.59  Aligned_cols=188  Identities=26%  Similarity=0.400  Sum_probs=168.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++++|+++||||++|||++++++|+++|++|++++| +.++.++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999 766666666666543  4678899999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccc-cCCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMD-RGTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~-~~~~~~~~~~~~~  206 (384)
                      ++++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.++   +||++||..+. .+.+         
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  165 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------  165 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC---------
Confidence            9999999999999997766777789999999999999999999999999874   79999998876 4433         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             +...|++||++++.++++++.|++++||++++|+||.++|++.+
T Consensus       166 -------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          166 -------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence                   66789999999999999999999999999999999999999754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-32  Score=246.30  Aligned_cols=191  Identities=26%  Similarity=0.349  Sum_probs=158.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.++.++.. ++    .+.++.++++|++|+++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI----KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999  99999999987765432 11    256789999999999999999999999


Q ss_pred             hCC--CccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----------------CcEEEEcCccc
Q psy2854         132 QYP--KIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----------------QKVVIVGSSLM  192 (384)
Q Consensus       132 ~~g--~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----------------~~iv~vsS~~~  192 (384)
                      ++|  ++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|.|                .+||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            998  9999999999976 5677778999999999999999999999999875                36999999987


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..+.....         ....+...|++||++++.++++++.|++++||+|++|+||+++|++.+.
T Consensus       156 ~~~~~~~~---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          156 SITDNTSG---------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             CSTTCCST---------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             ccCCcccc---------cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence            66542110         0001667899999999999999999999999999999999999999764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-32  Score=248.38  Aligned_cols=178  Identities=18%  Similarity=0.211  Sum_probs=150.5

Q ss_pred             CCCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Q psy2854          48 SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        48 ~~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      .+.+.+++||+++||||++|||+++|++|+++|++|++++|+.+.    .+++      +++.++ +|+  .++++++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~------~~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS------GHRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT------CSEEEE-CCT--TTCHHHHHH
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhh------CCeEEE-eeH--HHHHHHHHH
Confidence            344467999999999999999999999999999999999998522    2221      256677 999  556776666


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCC
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++    .++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|.|+     +||++||..+..+.+     
T Consensus        78 ~~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  148 (249)
T 1o5i_A           78 KV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE-----  148 (249)
T ss_dssp             HS----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----
T ss_pred             Hh----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC-----
Confidence            54    3899999999987777778889999999999999999999999999884     799999998876544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 +...|++||+++++++++++.|++++||+|++|+||+++|++.+.
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  193 (249)
T 1o5i_A          149 -----------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  193 (249)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence                       678999999999999999999999999999999999999998654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.9e-34  Score=255.70  Aligned_cols=182  Identities=19%  Similarity=0.233  Sum_probs=134.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++||||++|||+++|++|++ |++|++++|+.++.++..+       ..++.++.+|+++.++ .+.+.+..++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHh
Confidence            46899999999999999999999988 9999999999766544332       2468889999999877 4455555667


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++++|+||||||+....++.+.+.++|++++++|+.|++.+++.++|.|+    +||++||..+..+.+           
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  141 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP-----------  141 (245)
T ss_dssp             CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC-----------
Confidence            89999999999998777888889999999999999999999999999885    699999998877655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                           +...|++||+|+++|+++++.|++++||+|++|+||+++|++.+..
T Consensus       142 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  187 (245)
T 3e9n_A          142 -----GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL  187 (245)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh
Confidence                 6789999999999999999999999999999999999999987654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-32  Score=248.07  Aligned_cols=194  Identities=21%  Similarity=0.279  Sum_probs=164.7

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      +...++++|+++||||++|||+++|++|+++|   ++|++++|+.++.+. .+++.+.  +.++.++.+|++|.++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~--~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKN--HSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHH--CTTEEEEECCTTCGGGHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhcc--CCceEEEEecCCChHHHHHH
Confidence            33456889999999999999999999999999   999999999876654 3444443  45799999999999999999


Q ss_pred             HHHHHHhCC--CccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----------------CcEEE
Q psy2854         126 AKNVMKQYP--KIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----------------QKVVI  186 (384)
Q Consensus       126 ~~~i~~~~g--~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----------------~~iv~  186 (384)
                      ++++.+.++  ++|+||||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|                .+||+
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            999999988  8999999999876 5667778999999999999999999999999986                35999


Q ss_pred             EcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         187 VGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       187 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +||..+..+.+.             ..+...|++||++++.|+++++.|++++||+|++|+||+++|+|.+.
T Consensus       171 isS~~~~~~~~~-------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          171 MSSILGSIQGNT-------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             ECCGGGCSTTCC-------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             EecccccccCCC-------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC
Confidence            999887655321             01456799999999999999999999999999999999999999764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=5.2e-32  Score=243.81  Aligned_cols=180  Identities=21%  Similarity=0.272  Sum_probs=156.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++      ....++++|++|+++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHH----
Confidence            3578999999999999999999999999999999999976655443322      135567999999999988776    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||+....++.+.+.++|++.+++|+.+++++++++.|.|+      +||++||..+..+.+        
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  144 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------  144 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--------
Confidence            568999999999987767777789999999999999999999999999862      699999988766543        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||++++.++++++.|++++||+|++|+||.++|++.+
T Consensus       145 --------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          145 --------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence                    67789999999999999999999999999999999999999864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.7e-33  Score=280.51  Aligned_cols=189  Identities=19%  Similarity=0.254  Sum_probs=149.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec---------CchhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCR---------SMIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      +...+++||++|||||++|||+++|++|+++|++|++++|         +.++.++..+++.+.  +..   ..+|++|.
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~D~~d~   86 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGE---AVADYNSV   86 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCC---EEECCCCG
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCe---EEEEeCCH
Confidence            3346799999999999999999999999999999999988         666677777777654  223   34899999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR  194 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~  194 (384)
                      ++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||.++..
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~  166 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY  166 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            999999999999999999999999998888888899999999999999999999999999985     699999998887


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                      +.+                +...|++||+|+.+|+++++.|++++||+||+|+||.+ |+|....
T Consensus       167 ~~~----------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~  214 (613)
T 3oml_A          167 GNF----------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI  214 (613)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC
T ss_pred             CCC----------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc
Confidence            765                77899999999999999999999999999999999975 6666543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4.3e-33  Score=260.53  Aligned_cols=191  Identities=17%  Similarity=0.155  Sum_probs=152.9

Q ss_pred             CCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHHHhcCC---cEEEEEe-----
Q psy2854          52 KPMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIR-------GQEALEKLKKEVQDG---QIVLMEL-----  114 (384)
Q Consensus        52 ~~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~---~~~~~~~-----  114 (384)
                      .+++||+++||||  ++|||+++|++|+++|++|++++|+...       ..+..+++.+...+.   ...++.+     
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3578999999999  8999999999999999999999986411       011112221110111   0233444     


Q ss_pred             -------ecCC--------HHHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHH
Q psy2854         115 -------NLAS--------FDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLL  177 (384)
Q Consensus       115 -------Dvs~--------~~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  177 (384)
                             |++|        +++++++++++.+++|++|+||||||+..  ..++.+.+.++|++++++|+.|++++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                   3443        66899999999999999999999999853  456777899999999999999999999999


Q ss_pred             HHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCccc
Q psy2854         178 IERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCY  252 (384)
Q Consensus       178 ~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~  252 (384)
                      +|+|+   +||++||..+..+.+                +. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+
T Consensus       165 ~~~m~~~g~Iv~isS~~~~~~~~----------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          165 GPIMNEGGSAVTLSYLAAERVVP----------------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             STTEEEEEEEEEEEEGGGTSCCT----------------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             HHHHhcCCEEEEEecccccccCC----------------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            99985   799999998776544                44 47999999999999999999985 89999999999999


Q ss_pred             CCcccc
Q psy2854         253 TNLFRH  258 (384)
Q Consensus       253 T~~~~~  258 (384)
                      |++.+.
T Consensus       229 T~~~~~  234 (315)
T 2o2s_A          229 SRAASA  234 (315)
T ss_dssp             CHHHHH
T ss_pred             chhhhh
Confidence            998643

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.9e-32  Score=253.99  Aligned_cols=191  Identities=15%  Similarity=0.169  Sum_probs=153.2

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHH-------HHHHHHHHHhcCC----cEEEEEee---
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQ-------EALEKLKKEVQDG----QIVLMELN---  115 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~-------~~~~~l~~~~~~~----~~~~~~~D---  115 (384)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.....       +..+++ ++...+    ....+.+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            35789999999999  99999999999999999999988642110       001111 111011    12344443   


Q ss_pred             -----c----CC--------HHHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHH
Q psy2854         116 -----L----AS--------FDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNL  176 (384)
Q Consensus       116 -----v----s~--------~~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  176 (384)
                           +    +|        +++++++++++.+++|++|+||||||+..  ..++.+.+.++|++++++|+.|+++++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 2    22        66899999999999999999999999753  45667789999999999999999999999


Q ss_pred             HHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcc
Q psy2854         177 LIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWC  251 (384)
Q Consensus       177 ~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v  251 (384)
                      ++|+|+   +||++||..+..+.+                +. ..|++||+|+++|+++++.|+++ +||+||+|+||++
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~----------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v  226 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIP----------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL  226 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCT----------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HHHHhccCceEEEEeccccccCCC----------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccc
Confidence            999985   799999998776544                44 58999999999999999999985 8999999999999


Q ss_pred             cCCccccC
Q psy2854         252 YTNLFRHA  259 (384)
Q Consensus       252 ~T~~~~~~  259 (384)
                      +|++.+..
T Consensus       227 ~T~~~~~~  234 (297)
T 1d7o_A          227 GSRAAKAI  234 (297)
T ss_dssp             BCCCSSCC
T ss_pred             ccchhhhc
Confidence            99997754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.3e-32  Score=247.73  Aligned_cols=202  Identities=26%  Similarity=0.401  Sum_probs=164.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAK-LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++|+++||||++|||++++++|++ +|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            3679999999999999999999999 9999999999988888777777654  457889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCC-hhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCc--------C
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTT-KEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDF--------D  200 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~--------~  200 (384)
                      ++++|+||||||+...... +.+ .+++++++++|+.|++++++.++|.|+   +||++||..+..+....        .
T Consensus        80 ~g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             cCCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence            9999999999998654332 334 589999999999999999999999985   79999998776431100        0


Q ss_pred             --CCCcCc---------------CcccCCCChhhhhhcHHHHHHHHHHHHHHhCC----CCcEEEEEecCcccCCcccc
Q psy2854         201 --NLNGEK---------------GFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD----KGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       201 --~~~~~~---------------~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~----~gI~v~~v~PG~v~T~~~~~  258 (384)
                        .+.+..               .......+...|++||++++.++++++.|+++    .||+|++|+||+++|++.+.
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence              000000               00000012368999999999999999999987    79999999999999999764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=6.6e-33  Score=259.77  Aligned_cols=192  Identities=15%  Similarity=0.141  Sum_probs=132.8

Q ss_pred             CCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCc-----------hhHH-----------HHHHHHHHHhcC-
Q psy2854          52 KPMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSM-----------IRGQ-----------EALEKLKKEVQD-  106 (384)
Q Consensus        52 ~~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~-----------~~~~-----------~~~~~l~~~~~~-  106 (384)
                      .+++||+++||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++.+.... 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4578999999999  89999999999999999999998753           1111           112222211000 


Q ss_pred             CcEEEEEee------------cCC--------HHHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhc
Q psy2854         107 GQIVLMELN------------LAS--------FDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFG  164 (384)
Q Consensus       107 ~~~~~~~~D------------vs~--------~~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~  164 (384)
                      ....++.+|            ++|        +++++++++++.+++|++|+||||||+..  ..++.+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            012344433            343        45899999999999999999999999753  45677889999999999


Q ss_pred             hhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh-hhhhhcHHHHHHHHHHHHHHhCC-C
Q psy2854         165 INHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN-PAYCNSKLMNYYFGAELYLKYAD-K  239 (384)
Q Consensus       165 vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~aSK~a~~~~~~~la~e~~~-~  239 (384)
                      +|+.|+++++++++|+|+   +||++||..+..+.+                +. ..|++||+|+++|+++|+.|+++ +
T Consensus       165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------~~~~~Y~asKaal~~l~~~la~el~~~~  228 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP----------------GYGGGMSSAKAALESDCRTLAFEAGRAR  228 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC----------------ccchhhHHHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999985   799999998766544                44 58999999999999999999985 8


Q ss_pred             CcEEEEEecCcccCCccccC
Q psy2854         240 GVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       240 gI~v~~v~PG~v~T~~~~~~  259 (384)
                      ||+||+|+||+|+|+|.+..
T Consensus       229 gIrvn~v~PG~v~T~~~~~~  248 (319)
T 2ptg_A          229 AVRVNCISAGPLKSRAASAI  248 (319)
T ss_dssp             CCEEEEEEECCCC-------
T ss_pred             CeeEEEEeeCCccChhhhhc
Confidence            99999999999999997543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.98  E-value=2e-31  Score=255.31  Aligned_cols=190  Identities=12%  Similarity=-0.057  Sum_probs=159.9

Q ss_pred             CCCCEEEEeCCCCchhHH--HHHHHHHCCCEEEEEecCchhH-----------HHHHHHHHHHhcCCcEEEEEeecCCHH
Q psy2854          54 MEGKVCIITGANSGIGYE--TAKELAKLKATVVLGCRSMIRG-----------QEALEKLKKEVQDGQIVLMELNLASFD  120 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a--~a~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~~Dvs~~~  120 (384)
                      ..||+|+||||++|||++  ++++|+++|++|++++|+.+..           .+..++..+.. +.++..++||++|++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeCCCHH
Confidence            579999999999999999  9999999999999999976442           23333333332 567889999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCC-------------CCCCC---------------------CCCChhhHHHHhchh
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVS-------------VPIKE---------------------KLTTKEGYEVHFGIN  166 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~-------------~~~~~---------------------~~~~~~~~~~~~~vN  166 (384)
                      +++++++++.+++|++|+||||||..             ...++                     .+.+.++|+.++++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            99999999999999999999999984             22333                     356899999999999


Q ss_pred             hhHHH-HHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccCCCCh--hhhhhcHHHHHHHHHHHHHHhCC
Q psy2854         167 HVGHF-LLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN--PAYCNSKLMNYYFGAELYLKYAD  238 (384)
Q Consensus       167 ~~~~~-~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~aSK~a~~~~~~~la~e~~~  238 (384)
                      ..+.+ .+++.+.+.+.     +||++||..+..+.+                .+  ++|++||+|+++|+++|+.|+++
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p----------------~~~~~aY~ASKaAL~~ltrsLA~ELa~  280 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYK----------------IYREGTIGIAKKDLEDKAKLINEKLNR  280 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTT----------------TTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCC----------------ccccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99988 77787776532     699999998776655                44  79999999999999999999999


Q ss_pred             -CCcEEEEEecCcccCCccccCc
Q psy2854         239 -KGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       239 -~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                       +|||||+|+||.|+|++....+
T Consensus       281 ~~GIrVN~V~PG~v~T~~s~~ip  303 (418)
T 4eue_A          281 VIGGRAFVSVNKALVTKASAYIP  303 (418)
T ss_dssp             HHSCEEEEEECCCCCCHHHHTST
T ss_pred             ccCeEEEEEECCcCcChhhhcCC
Confidence             9999999999999999987664

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.98  E-value=2e-31  Score=239.87  Aligned_cols=180  Identities=20%  Similarity=0.233  Sum_probs=156.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..++    .  ....++.+|++|+++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----C--PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----S--TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c--cCCCcEEecCCCHHHHHHHHH----
Confidence            357899999999999999999999999999999999997665544332    2  245667999999999988876    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|.      +||++||..+..+.+        
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  144 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------  144 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC--------
Confidence            578999999999987767777889999999999999999999999999862      699999988766544        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                              +...|++||++++.++++++.|++++||++++|+||.+.|++.+
T Consensus       145 --------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          145 --------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence                    66789999999999999999999999999999999999999854

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=7e-31  Score=235.86  Aligned_cols=174  Identities=21%  Similarity=0.238  Sum_probs=153.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .             .++.++++|++|+++++++++++ +++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             23578999999999999999999 88899


Q ss_pred             ccEEEECCCCCCCCCCCCCCh----hhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCCcCcC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTK----EGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~----~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~~~~~  200 (384)
                      +|++|||||.....+..+.+.    +++++++++|+.+++.+++.++|.|.           +||++||..+..+.+   
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  143 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---  143 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence            999999999876655554444    49999999999999999999999874           699999988776544   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                   +...|++||++++.++++++.|++++||+|++|+||+++|++.+...
T Consensus       144 -------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~  190 (242)
T 1uay_A          144 -------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP  190 (242)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC
T ss_pred             -------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc
Confidence                         67789999999999999999999999999999999999999876544

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=4.1e-29  Score=247.89  Aligned_cols=181  Identities=14%  Similarity=0.081  Sum_probs=160.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEE-ecCc-------------hhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKAT-VVLG-CRSM-------------IRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      .+|++|||||++|||+++|++|+++|++ |+++ +|+.             ++.++..+++.+.  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            5899999999999999999999999998 7777 8983             4556666666654  57899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-----C-cEEEEcCcccc
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-----Q-KVVIVGSSLMD  193 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-----~-~iv~vsS~~~~  193 (384)
                      ++++++++++. +++++|+||||||+....++.+.+.+++++++++|+.|++++.+.+.+.+     . +||++||.++.
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            99999999998 78999999999999888888899999999999999999999999999998     3 79999999988


Q ss_pred             cCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         194 RGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .+.+                +...|++||+++++|+    .+++..||++++|+||.++|+|...
T Consensus       407 ~g~~----------------g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~  451 (525)
T 3qp9_A          407 WGGA----------------GQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTE  451 (525)
T ss_dssp             TCCT----------------TCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGS
T ss_pred             CCCC----------------CCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccc
Confidence            8766                7889999999998874    5677889999999999999999853

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.96  E-value=3.2e-30  Score=233.87  Aligned_cols=178  Identities=17%  Similarity=0.152  Sum_probs=132.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||++|||+++|++|+++|++|++++|+.++.+.            .   +++|++|+++++++++++   .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~---~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D---LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C---TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c---cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998654321            1   578999999998887633   3899


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcC---cCc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGE---KGF  208 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~---~~~  208 (384)
                      |+||||||+...       .+.|++++++|+.|+++++++++|.|+     +||++||..+.............   ...
T Consensus        64 d~lv~~Ag~~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             SEEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             CEEEECCCCCCC-------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccch
Confidence            999999998531       133899999999999999999999884     69999999876321100000000   000


Q ss_pred             ---------ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         209 ---------VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       209 ---------~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               ....++...|++||++++.++++++.|++++||+|++|+||+++|++.+..
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence                     001115678999999999999999999999999999999999999997643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=5e-29  Score=217.73  Aligned_cols=158  Identities=17%  Similarity=0.219  Sum_probs=142.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+||||++++++|+ +|++|++++|+.+                   .+++|++|+++++++++++    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9999999999853                   3789999999999988765    7899


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      ++|||||.....+..+.+.+++++.+++|+.+++.+++.+.|.++   ++|++||..+..+.+                +
T Consensus        61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------~  124 (202)
T 3d7l_A           61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIV----------------Q  124 (202)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCT----------------T
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCC----------------c
Confidence            999999987667777789999999999999999999999999864   799999987765543                6


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...|++||++++.++++++.|+ ++||++++|+||++.|++.
T Consensus       125 ~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A          125 GASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWD  165 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchh
Confidence            6789999999999999999999 7899999999999999873

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=2.9e-29  Score=219.98  Aligned_cols=171  Identities=16%  Similarity=0.096  Sum_probs=146.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+||||++++++|+++  +|++++|+.++.++..+++    + .  .++++|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~----~-~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV----G-A--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH----T-C--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc----c-C--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            58999999999999999999999  9999999977665554443    1 2  7789999999999998886    6899


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |+||||||.....++.+.+.+++++++++|+.+++.+++++... ..+||++||..+..+.+                +.
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~----------------~~  131 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP----------------GF  131 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST----------------TB
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------------Cc
Confidence            99999999977777778889999999999999999999998332 13799999988765544                67


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ..|++||++++.++++++.|++++||++++++||.+.|++.
T Consensus       132 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~  172 (207)
T 2yut_A          132 AAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW  172 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc
Confidence            79999999999999999999999999999999999999974

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.96  E-value=1.1e-28  Score=267.58  Aligned_cols=187  Identities=17%  Similarity=0.174  Sum_probs=161.7

Q ss_pred             CCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSG-IGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.++.++..+++.+..+  +.++.+++||++|.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            588999999999998 9999999999999999998 6888888877777766543  45789999999999999999999


Q ss_pred             HHHh-----CC-CccEEEECCCCCCCC-CCCCCC--hhhHHHHhchhhhHHHHHHHHH--HHhcC-----cEEEEcCccc
Q psy2854         129 VMKQ-----YP-KIHVLINNAGVSVPI-KEKLTT--KEGYEVHFGINHVGHFLLTNLL--IERIQ-----KVVIVGSSLM  192 (384)
Q Consensus       129 i~~~-----~g-~id~lvnnAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~l~-----~iv~vsS~~~  192 (384)
                      +.++     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  +|.|.     +||++||..+
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence            9998     66 999999999997766 777778  8999999999999999999988  67774     6999999877


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHH-HHHHHHHhCCCCcEEEEEecCccc-CCcccc
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF-GAELYLKYADKGVDVSVVCPGWCY-TNLFRH  258 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~  258 (384)
                      ..+                  +...|++||+|+++| ++.++.++++. |+||+|+||+|+ |+|...
T Consensus       832 ~~g------------------g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~  880 (1887)
T 2uv8_A          832 TFG------------------GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSA  880 (1887)
T ss_dssp             CSS------------------CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----
T ss_pred             ccC------------------CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEeccccccccccc
Confidence            654                  345799999999999 99999999887 999999999999 888653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=5.9e-28  Score=261.27  Aligned_cols=187  Identities=17%  Similarity=0.186  Sum_probs=161.8

Q ss_pred             CCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSG-IGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.++..  +.++.++.||++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999 99999999999999999985 667777777777755543  45789999999999999999999


Q ss_pred             HHHh---CC-CccEEEECCCCCCCC-CCCCCC--hhhHHHHhchhhhHHHHHHHH--HHHhcC-----cEEEEcCccccc
Q psy2854         129 VMKQ---YP-KIHVLINNAGVSVPI-KEKLTT--KEGYEVHFGINHVGHFLLTNL--LIERIQ-----KVVIVGSSLMDR  194 (384)
Q Consensus       129 i~~~---~g-~id~lvnnAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~--~~~~l~-----~iv~vsS~~~~~  194 (384)
                      +.++   +| ++|+||||||+.... ++.+.+  .++|++++++|+.|++.+++.  ++|.|.     +||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence            9998   89 999999999997766 778878  899999999999999999987  678873     699999987765


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHH-hCCCCcEEEEEecCccc-CCcccc
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLK-YADKGVDVSVVCPGWCY-TNLFRH  258 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e-~~~~gI~v~~v~PG~v~-T~~~~~  258 (384)
                      +                  +...|++||+|+++|++.++.+ +++. |+||+|+||+++ |+|...
T Consensus       809 g------------------g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          809 G------------------NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             S------------------CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH
T ss_pred             C------------------CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc
Confidence            4                  2347999999999999877655 7666 999999999999 998753

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.4e-29  Score=263.12  Aligned_cols=187  Identities=17%  Similarity=0.172  Sum_probs=162.0

Q ss_pred             CCCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSG-IGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        52 ~~~~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      .+++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.++.+  +.++.+++||++|.++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4688999999999998 9999999999999999998 6777777766666644432  4578899999999999999999


Q ss_pred             HHHHh-----CC-CccEEEECCCCCCCC-CCCCCC--hhhHHHHhchhhhHHHHHHHHH--HHhcC-----cEEEEcCcc
Q psy2854         128 NVMKQ-----YP-KIHVLINNAGVSVPI-KEKLTT--KEGYEVHFGINHVGHFLLTNLL--IERIQ-----KVVIVGSSL  191 (384)
Q Consensus       128 ~i~~~-----~g-~id~lvnnAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~l~-----~iv~vsS~~  191 (384)
                      ++.++     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|+     +||++||.+
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence            99998     77 999999999997666 777777  8999999999999999999998  78874     699999987


Q ss_pred             cccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHH-HHHHHHHhCCCCcEEEEEecCccc-CCccc
Q psy2854         192 MDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF-GAELYLKYADKGVDVSVVCPGWCY-TNLFR  257 (384)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~  257 (384)
                      +..+                  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|..
T Consensus       632 G~~G------------------g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~  680 (1688)
T 2pff_A          632 GTFG------------------GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS  680 (1688)
T ss_dssp             TTSS------------------CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred             hccC------------------CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence            6544                  345799999999999 78888888877 999999999999 78754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=2.5e-28  Score=253.17  Aligned_cols=179  Identities=16%  Similarity=0.174  Sum_probs=159.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHH-HCCC-EEEEEecC---chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELA-KLKA-TVVLGCRS---MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~-~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+|+++||||++|||+++|+.|+ ++|+ +|++++|+   .++.++..+++.+.  +.++.+++||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 59999999   45566677777654  678999999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      .+++ +||+||||||+....++.+.+.++|++++++|+.|++++++++.|.| +||++||.++..+.+            
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~------------  672 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSG------------  672 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCS------------
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCC------------
Confidence            8776 99999999999888888999999999999999999999999998888 999999999988876            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          ++..|++||+    |+++|++++++.||++|+|+||++.|++..
T Consensus       673 ----g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          673 ----GQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             ----SCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHH
T ss_pred             ----CCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhh
Confidence                8889999996    666667777778999999999999988653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=9.9e-28  Score=235.41  Aligned_cols=180  Identities=17%  Similarity=0.144  Sum_probs=155.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+|+++||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.  +.++.++.||++|.++++++++++.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            459999999999999999999999999 799999974   3345555666543  5789999999999999999999987


Q ss_pred             HhCCCccEEEECCCCC-CCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         131 KQYPKIHVLINNAGVS-VPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      ++ +++|+||||||+. ...++.+.+.++|++++++|+.|++++.+.+.+... +||++||.++..+.+           
T Consensus       316 ~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-----------  383 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-----------  383 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT-----------
T ss_pred             Hh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC-----------
Confidence            77 7999999999997 667888899999999999999999999999988764 899999999887765           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                           ++..|++||+++++|++.++    ..||++++|+||.+.|+.+.
T Consensus       384 -----g~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          384 -----GQPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC-
T ss_pred             -----CcHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccc
Confidence                 78899999999999887654    45999999999998776543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=1.4e-26  Score=209.16  Aligned_cols=175  Identities=25%  Similarity=0.247  Sum_probs=137.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+||||++++++|+++|++|++++|+.++.+.               .+++|++|+++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            589999999999999999999999999999998654221               1578999999999888755   4789


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-----CcEEEEcCcccccCCcCcCCC-------Cc
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-----QKVVIVGSSLMDRGTIDFDNL-------NG  204 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-----~~iv~vsS~~~~~~~~~~~~~-------~~  204 (384)
                      |+||||||....       .+.+++.+++|+.+++++++++.+.|     .++|++||..+..+.......       +.
T Consensus        64 d~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           64 DGLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             SEEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             cEEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccch
Confidence            999999997431       23488899999999999999999986     379999999877543110000       00


Q ss_pred             CcCc---ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         205 EKGF---VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       205 ~~~~---~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ....   ....++...|++||++++.+++.++.++++.||++++++||.+.|++.
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~  191 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL  191 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence            0000   000015678999999999999999999988899999999999999874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=4.3e-25  Score=218.14  Aligned_cols=177  Identities=20%  Similarity=0.202  Sum_probs=151.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMI---RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++++||||+||||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++++++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            579999999999999999999999999 6999999864   345555555443  56799999999999999998876  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                         +++|+||||||+.....+.+.+.++++.++++|+.|++++.+.+.+.  +.+||++||.++..+.+           
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----------  399 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----------  399 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----------
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----------
Confidence               68999999999987777888899999999999999999999987653  35899999998877665           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC-YTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~  258 (384)
                           +...|++||++++.|++.++    ..|+++++|+||.+ +|+|...
T Consensus       400 -----g~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          400 -----GQGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCC
T ss_pred             -----CCHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCccccc
Confidence                 77899999999999988653    56999999999999 8888754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=2.7e-25  Score=202.73  Aligned_cols=172  Identities=17%  Similarity=0.171  Sum_probs=142.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||||+||||++++++|+++|++|++++|+..+..           ..++.++.+|++|+++++++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            35789999999999999999999999999999999875432           3578999999999999998876      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                       ++|+||||||..        +.+.|++++++|+.|++++++++.+.- ++||++||..+....+....+.+.....   
T Consensus        64 -~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~---  131 (267)
T 3rft_A           64 -GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPAR---  131 (267)
T ss_dssp             -TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC---
T ss_pred             -CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCC---
Confidence             689999999983        445688999999999999999998765 3899999988775444333333333222   


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                       +...|+.||++.+.+++.++.++   |+++++|+||.+.+++...
T Consensus       132 -~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~  173 (267)
T 3rft_A          132 -PDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY  173 (267)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC
Confidence             56789999999999999999886   8999999999999887543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=2e-25  Score=219.69  Aligned_cols=177  Identities=16%  Similarity=0.135  Sum_probs=151.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCch---hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMI---RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++++||||+||||++++++|+++|++ |++++|+..   ..++..+++.+.  +.++.++.||++|.++++++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            5799999999999999999999999995 999999875   344555555443  568999999999999999999998 


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      ++++++|+||||||+....++.+.+.+++++++++|+.|++++.+.+.+. ..++|++||.++..+.+            
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------  369 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------  369 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------
Confidence            56789999999999987777888899999999999999999999988765 34899999998877665            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                          +...|+++|++++.|++.++    ..|+++++|+||.+.|+
T Consensus       370 ----g~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          370 ----GLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGS  406 (486)
T ss_dssp             ----TCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--
T ss_pred             ----CCHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCC
Confidence                67789999999998876554    45999999999999876

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=1.9e-25  Score=253.09  Aligned_cols=188  Identities=19%  Similarity=0.201  Sum_probs=144.7

Q ss_pred             CCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSG-IGYETAKELAKLKATVVLGCRSMIR-GQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .++||++|||||++| ||+++|++|+++|++|++++|+.++ ..+..+++.++..  +.++..++||++|++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998766 2222333433332  45788899999999999999999


Q ss_pred             HHH----hCCCccEEEECCCCC----C-CCCCCCCChhhHHHH----hchhhhHHHHHHHHHHHhcCc--------EEEE
Q psy2854         129 VMK----QYPKIHVLINNAGVS----V-PIKEKLTTKEGYEVH----FGINHVGHFLLTNLLIERIQK--------VVIV  187 (384)
Q Consensus       129 i~~----~~g~id~lvnnAG~~----~-~~~~~~~~~~~~~~~----~~vN~~~~~~l~~~~~~~l~~--------iv~v  187 (384)
                      +.+    ++|++|+||||||+.    . .....+.+.++|+..    +++|+.+++.+++.+.+.|..        ++..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    889999999999971    1 122333355555555    999999999999999998751        2222


Q ss_pred             cCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHH--hCCCCcEEEEEecCccc-CCcccc
Q psy2854         188 GSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLK--YADKGVDVSVVCPGWCY-TNLFRH  258 (384)
Q Consensus       188 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e--~~~~gI~v~~v~PG~v~-T~~~~~  258 (384)
                      +|..  .+..               .+..+|++||+|+.+|+++++.|  ++ .+|+||+|+||+|+ |++...
T Consensus      2293 ~ss~--~g~~---------------g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D         2293 GSPN--RGMF---------------GGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp             ECSS--TTSC---------------SSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTT
T ss_pred             CCcc--cccC---------------CCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCccccc
Confidence            2211  1100               03457999999999999999999  65 46999999999999 777543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.89  E-value=8.2e-23  Score=182.65  Aligned_cols=162  Identities=17%  Similarity=0.111  Sum_probs=125.9

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcE-EEEEeecCCHHHHHHHHHH
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQI-VLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ...+++||+++||||+||||++++++|+++|++|++++|+.++.++..+        .++ .++++|++         +.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~   77 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------ED   77 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SC
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HH
Confidence            3357899999999999999999999999999999999999876554321        257 88999998         23


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +.+.++++|+||||||...        .++++..+++|+.++.++++++...- +++|++||..+..+...         
T Consensus        78 ~~~~~~~~D~vi~~ag~~~--------~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~---------  140 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGP--------HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG---------  140 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCT--------TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGS---------
T ss_pred             HHHHHcCCCEEEECCCCCC--------CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCC---------
Confidence            3445568999999999742        25678899999999999999997764 48999999654433100         


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .    .+...|+.||++++.+.+       ..|+++++++||.+.|+..
T Consensus       141 ~----~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~  178 (236)
T 3e8x_A          141 P----MNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEES  178 (236)
T ss_dssp             C----GGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCC
T ss_pred             h----hhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCC
Confidence            0    156789999999998865       4599999999999999853

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=4e-22  Score=189.15  Aligned_cols=187  Identities=13%  Similarity=0.042  Sum_probs=145.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.....+.+.   ...++.++++|++|++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            567899999999999999999999999999999998765444333321   1357888999999999999888765    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                       ++|+||||||...    ...+.++++..+++|+.++.++++++.+.  .+++|++||...+........+.+....   
T Consensus        80 -~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~---  151 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM---  151 (357)
T ss_dssp             -CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB---
T ss_pred             -CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC---
Confidence             7999999999622    11245677889999999999999999886  3489999998765432211112221111   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhC------CCCcEEEEEecCcccCCcc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYA------DKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~------~~gI~v~~v~PG~v~T~~~  256 (384)
                       .+...|+.||++.+.+++.++.++.      +.|+++++++||.+.++..
T Consensus       152 -~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          152 -GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence             1556899999999999999999875      4589999999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=1e-21  Score=185.08  Aligned_cols=184  Identities=15%  Similarity=0.082  Sum_probs=145.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++||||+|+||++++++|+++|++|++++|+.++..+..+++.... +.++.++++|++|++++++++++     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46799999999999999999999999999999998877766666665543 45788999999999999988875     4


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      ++|++|||||......    ..+..+..+++|+.++.++++++...- +++|++||...+.. .....+.+.....    
T Consensus        78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~-~~~~~~~e~~~~~----  148 (341)
T 3enk_A           78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGV-PERSPIDETFPLS----  148 (341)
T ss_dssp             CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCS-CSSSSBCTTSCCB----
T ss_pred             CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecC-CCCCCCCCCCCCC----
Confidence            7999999999854322    334456788999999999999887764 48999999776532 2222233332222    


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +...|+.||++.+.+++.++.++.  |+++++++||.+..+.
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence            556899999999999999998863  6999999999998774

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=6.3e-22  Score=186.97  Aligned_cols=170  Identities=12%  Similarity=0.129  Sum_probs=140.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKL-KA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~-G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..+++|+++||||+|+||++++++|+++ |+ +|++++|+..+..+..+++    ...++.++.+|++|.++++++++  
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF----NDPRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH----CCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh----cCCCEEEEECCCCCHHHHHHHHh--
Confidence            4578999999999999999999999999 98 9999999876655444333    24578999999999998877654  


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                           ++|+||||||.... +.   .....++.+++|+.|+.++++++.+.. +++|++||..+..              
T Consensus        91 -----~~D~Vih~Aa~~~~-~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------  147 (344)
T 2gn4_A           91 -----GVDICIHAAALKHV-PI---AEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------  147 (344)
T ss_dssp             -----TCSEEEECCCCCCH-HH---HHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------------
T ss_pred             -----cCCEEEECCCCCCC-Cc---hhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------------
Confidence                 68999999997432 11   233456799999999999999999875 4899999865432              


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                           +...|++||++.+.++++++.++++.|+++++++||.+.++.
T Consensus       148 -----p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          148 -----PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence                 345799999999999999999888889999999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.88  E-value=7.4e-22  Score=185.81  Aligned_cols=191  Identities=14%  Similarity=0.072  Sum_probs=144.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEE-EeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM-ELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dvs~~~~v~~~~~~i~  130 (384)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.++.+...+.+.... +.++.++ .+|++|.++++++++   
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc---
Confidence            35788999999999999999999999999999999999776655444443322 2568888 799999987776553   


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCC-cCc--CCCCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGT-IDF--DNLNGE  205 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~-~~~--~~~~~~  205 (384)
                          ++|++|||||.....       +++++.+++|+.++.++++++.+.  .+++|++||...+... +..  ..+.+.
T Consensus        83 ----~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~  151 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEK  151 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTT
T ss_pred             ----CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCcc
Confidence                689999999975321       345679999999999999999863  4589999998775322 100  011111


Q ss_pred             cC------------cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         206 KG------------FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       206 ~~------------~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..            ...+..+...|+.||++.+.+++.++.++.. ++++++++||.+.++....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~  215 (342)
T 1y1p_A          152 SWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDP  215 (342)
T ss_dssp             CCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCT
T ss_pred             ccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCC
Confidence            10            0001124568999999999999999999865 8999999999999998654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.88  E-value=4.6e-22  Score=187.45  Aligned_cols=186  Identities=18%  Similarity=0.106  Sum_probs=138.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||||+|+||++++++|+++|++|++++|+.++...  +.+.......++.++.+|++|.++++++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            457899999999999999999999999999999998765432  12222212346888999999999999988776    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                       ++|++|||||....    +.+.++++..+++|+.++.++++++.+.-  +++|++||...+.... ...+.+....   
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~-~~~~~e~~~~---  145 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQ-EIPQTEKTPF---  145 (345)
T ss_dssp             -CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCS-SSSBCTTSCC---
T ss_pred             -CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC-CCCCCccCCC---
Confidence             79999999997431    11345688899999999999999998754  4899999987654322 1122222221   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYA---DKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~---~~gI~v~~v~PG~v~T~~  255 (384)
                       .+...|+.||++.+.+++.++.++.   ..++.++.+.||...|.+
T Consensus       146 -~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          146 -YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence             2566899999999999999999874   234566677787766654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=2.3e-22  Score=228.94  Aligned_cols=174  Identities=21%  Similarity=0.143  Sum_probs=136.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhHH---HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSMIRGQ---EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+|+++||||++|||+++|+.|+++|++ |++++|+..+.+   +..+++.+.  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999997 888999875543   334444332  5688899999999999999999987


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      + +|++|+||||||+....++.+.+.++|++++++|+.|++++.+.+.+.+.   +||++||.++..+.+          
T Consensus      1961 ~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~---------- 2029 (2512)
T 2vz8_A         1961 Q-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA---------- 2029 (2512)
T ss_dssp             H-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT----------
T ss_pred             h-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC----------
Confidence            4 79999999999997777888899999999999999999999999988764   799999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC  251 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v  251 (384)
                            ++..|++||+++++|++.++.+    |++..++..|.+
T Consensus      2030 ------g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2030 ------GQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             ------CcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence                  7789999999999999987766    777788877654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=3.4e-21  Score=179.52  Aligned_cols=190  Identities=11%  Similarity=-0.035  Sum_probs=146.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCchhH------------HHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELA-KLKATVVLGCRSMIRG------------QEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~-~~G~~Vi~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      ...+|+|||||||+|||+|++..|+ +.|++++++++..+..            ....+++++.  +.+...+.||++|+
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCH
Confidence            3568999999999999999999999 7899999988865322            2333444443  67899999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCC-------------CC---------------------CCCChhhHHH---H
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPI-------------KE---------------------KLTTKEGYEV---H  162 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~-------------~~---------------------~~~~~~~~~~---~  162 (384)
                      ++++++++++++++|+||+||||+|.....             |+                     ...+.++++.   .
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            999999999999999999999999975211             11                     1123444444   4


Q ss_pred             hchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCC
Q psy2854         163 FGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADK  239 (384)
Q Consensus       163 ~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~  239 (384)
                      |.....+.+...+...+.|.   +++.+|+.......|.+              ....++++|++++..++.|+.+++  
T Consensus       205 Mg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y--------------~~G~mG~AKaaLEa~~r~La~eL~--  268 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALY--------------RKGTIGKAKEHLEATAHRLNKENP--  268 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHH--------------TTSHHHHHHHHHHHHHHHHHHHCT--
T ss_pred             HhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCC--------------CccHHHHHHHHHHHHHHHHHHhcC--
Confidence            55556666666666667675   79999887665544321              334689999999999999999997  


Q ss_pred             CcEEEEEecCcccCCccccCc
Q psy2854         240 GVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       240 gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      ++++++++||.+.|+-....+
T Consensus       269 ~~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          269 SIRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             TEEEEEEECCCCCCTTGGGSS
T ss_pred             CCcEEEEEcCccccchhhcCC
Confidence            489999999999999887765

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=2.3e-22  Score=180.29  Aligned_cols=157  Identities=20%  Similarity=0.100  Sum_probs=127.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++|+++||||+||||++++++|+++|+  +|++++|+.++.++..        ..++.++.+|++|+++++++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc----
Confidence            5678999999999999999999999999  9999999876543211        1257789999999988876653    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                         ++|++|||||...       ..+.++..+++|+.++..+++++.+.. +++|++||..+...               
T Consensus        84 ---~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~---------------  138 (242)
T 2bka_A           84 ---GHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS---------------  138 (242)
T ss_dssp             ---SCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT---------------
T ss_pred             ---CCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC---------------
Confidence               7999999999732       224567899999999999999988764 48999999876432               


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGV-DVSVVCPGWCYTNLFR  257 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI-~v~~v~PG~v~T~~~~  257 (384)
                         +...|++||++++.+++.+       ++ ++++|+||.+.|++..
T Consensus       139 ---~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          139 ---SNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             ---CSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGG
T ss_pred             ---CcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCC
Confidence               3347999999999987653       56 7999999999999753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-20  Score=178.26  Aligned_cols=182  Identities=12%  Similarity=0.073  Sum_probs=140.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+++||||+|+||++++++|+++|++|++++|+. ....+..+.+..   .+++.++.+|++|+++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999854 222333334432   246888999999999999888752     6


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcC-------------
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFD-------------  200 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~-------------  200 (384)
                      +|+||||||....    +.+.++++..+++|+.++.++++++.+...  ++|++||...+.......             
T Consensus        74 ~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           74 PDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             CSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             CCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCccccccccccccc
Confidence            9999999997421    123457788999999999999999999874  699999987654322100             


Q ss_pred             --CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         201 --NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       201 --~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                        .+.+..    +..+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       150 ~~~~~e~~----~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          150 PNGYDEST----QLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             TTCBCTTS----CCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCC
T ss_pred             ccCccccC----CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCC
Confidence              011111    11256789999999999999999886   899999999999999754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.86  E-value=5.1e-21  Score=178.70  Aligned_cols=177  Identities=15%  Similarity=0.095  Sum_probs=137.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+.++++||||+|+||++++++|+++|++|++++|+.+. +.    +       ++.++.+|++|+++++++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----
Confidence            346799999999999999999999999999999998653 11    1       578899999999999988775     


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCc-CcCCCCcCcCccc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQ  210 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~-~~~~~~~~~~~~~  210 (384)
                      +++|++|||||.....    .+.++++..+++|+.|+.++++++...  .+++|++||...+.... ....+.+....  
T Consensus        73 ~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~--  146 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL--  146 (321)
T ss_dssp             HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC--
T ss_pred             cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC--
Confidence            3799999999974321    133467889999999999999999433  34899999987654321 11122222221  


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                        .+...|+.||++.+.+++.++.++   |+++++++||.+.++....
T Consensus       147 --~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~  189 (321)
T 2pk3_A          147 --RPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSL  189 (321)
T ss_dssp             --BCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCT
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCC
Confidence              155689999999999999999875   8999999999999987654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=3.4e-20  Score=178.64  Aligned_cols=192  Identities=14%  Similarity=0.059  Sum_probs=141.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH----------------HHHHHHHHHhcCCcEEEEEeec
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ----------------EALEKLKKEVQDGQIVLMELNL  116 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~Dv  116 (384)
                      ..++.+++||||+|.||++++++|+++|++|++++|+.....                +...++... .+.++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL-TGKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-HCCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc-cCCceEEEECCC
Confidence            356789999999999999999999999999999998653321                112222211 145788899999


Q ss_pred             CCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCccccc
Q psy2854         117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDR  194 (384)
Q Consensus       117 s~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~  194 (384)
                      +|+++++++++..     ++|+||||||........ .++++++..+++|+.|+.++++++.+..  +++|++||.+.+.
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg  160 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSM-IDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYG  160 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGC
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccchh-hCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhC
Confidence            9999999888765     699999999975432222 2566778899999999999999998875  4899999986553


Q ss_pred             CCcCcCCCCcCc----------CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         195 GTIDFDNLNGEK----------GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       195 ~~~~~~~~~~~~----------~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...  ..+.+..          ....+..+...|+.||++.+.+++.++.++   |+++++++||.+.+|..
T Consensus       161 ~~~--~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          161 TPN--IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CCS--SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             CCC--CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            321  1122110          000112255689999999999999998886   89999999999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.86  E-value=8.6e-21  Score=179.64  Aligned_cols=185  Identities=15%  Similarity=0.066  Sum_probs=142.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ---DGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+..+++.+...   ..++.++.+|++|.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            5678999999999999999999999999999999976433333333332211   2468899999999998887765   


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                          ++|++|||||.....    .+.++++..+++|+.++.++++++.+.- +++|++||...+.+... ..+.+.... 
T Consensus       102 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~-~~~~E~~~~-  171 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG-LPKVEDTIG-  171 (352)
T ss_dssp             ----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC-SSBCTTCCC-
T ss_pred             ----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCC-CCCCCCCCC-
Confidence                789999999974321    1346778899999999999999998764 47999999877654321 122222211 


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         .+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       172 ---~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          172 ---KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCC
Confidence               245689999999999999999886   899999999999998754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.86  E-value=2.6e-20  Score=179.13  Aligned_cols=185  Identities=12%  Similarity=0.054  Sum_probs=138.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCchh---------HHHHHHHHHHHhc---CCc---EEEEEeecCCH
Q psy2854          56 GKVCIITGANSGIGYETAKELA-KLKATVVLGCRSMIR---------GQEALEKLKKEVQ---DGQ---IVLMELNLASF  119 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~-~~G~~Vi~~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~Dvs~~  119 (384)
                      +++++||||+|+||++++++|+ ++|++|++++|+...         .+...+.+.+...   ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999997654         2222222222211   124   88999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcC
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTID  198 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~  198 (384)
                      +++++++++    ++++|+||||||......    +.++++..+++|+.++.++++++...- +++|++||...+.....
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~  153 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM  153 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCc
Confidence            998877653    566999999999743221    346778899999999999999987654 48999999765432210


Q ss_pred             ------cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         199 ------FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       199 ------~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                            ...+.+....    .+...|+.||++.+.+++.++.++   |+++++++||.+..+.
T Consensus       154 ~~~~~~~~~~~E~~~~----~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKK----SPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             -----CCCCBCTTSCC----BCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             ccccccccCcCccCCC----CCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence                  1222222221    145689999999999999999987   8999999999998775

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.85  E-value=9.5e-21  Score=178.01  Aligned_cols=180  Identities=13%  Similarity=0.133  Sum_probs=136.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++++++||||+|+||++++++|+++|  ++|++++|+..  ..+. .+++.   ...++.++.+|++|.+++++++    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~----   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE---DDPRYTFVKGDVADYELVKELV----   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc---cCCceEEEEcCCCCHHHHHHHh----
Confidence            45689999999999999999999997  89999998642  1111 11111   1357889999999999888876    


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                         +++|++|||||....    +.+.++++..+++|+.++.++++++.+.-  +++|++||...+.... -..+.+....
T Consensus        74 ---~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~-~~~~~E~~~~  145 (336)
T 2hun_A           74 ---RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL-KGSFTENDRL  145 (336)
T ss_dssp             ---HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS-SSCBCTTBCC
T ss_pred             ---hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC-CCCcCCCCCC
Confidence               379999999997431    12446678899999999999999999874  4899999986543321 1122222222


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                          .+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       146 ----~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          146 ----MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQF  187 (336)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCC
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCC
Confidence                255689999999999999999885   899999999999999753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.84  E-value=1.9e-20  Score=168.42  Aligned_cols=169  Identities=16%  Similarity=0.065  Sum_probs=127.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++|+++||||+|+||++++++|+++  |++|++++|+.++.++    +     ..++.++.+|++|+++++++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~-----~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c-----CCCeeEEEecCCCHHHHHHHHc----
Confidence            45789999999999999999999999  8999999998654332    1     2456788999999998888764    


Q ss_pred             hCCCccEEEECCCCCCCCCC---------CCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKE---------KLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~  201 (384)
                         ++|++|||||.......         .+...+.+++.+++|+.++..+++++.+.. +++|++||..+.......  
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~--  143 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL--  143 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG--
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCcc--
Confidence               58999999997542211         111234455788999999999999998764 489999998764321100  


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                          ..|     +...|+.+|++++.+.+.       .|+++++++||.+.++..
T Consensus       144 ----~~~-----~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          144 ----NKL-----GNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             ----GGG-----GGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred             ----ccc-----cchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence                000     123477899999887652       689999999999998863

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.84  E-value=2.3e-20  Score=175.55  Aligned_cols=188  Identities=14%  Similarity=0.023  Sum_probs=133.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++|+++||||+|+||++++++|+++|++|+++.|+.+...+. ..+.+ ..  ..++.++++|++|.++++++++    
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLD-LPKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHT-STTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHh-cccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            3578999999999999999999999999999999987643322 11111 11  1257889999999998887764    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcC-CCCcCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFD-NLNGEKGF  208 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~-~~~~~~~~  208 (384)
                         .+|++||+|+..   ...  ..+..+..+++|+.|+.++++++.+..  +++|++||..+..+..... .+++....
T Consensus        77 ---~~d~Vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~  148 (337)
T 2c29_D           77 ---GCTGVFHVATPM---DFE--SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWS  148 (337)
T ss_dssp             ---TCSEEEECCCCC---CSS--CSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCC
T ss_pred             ---CCCEEEEecccc---CCC--CCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCC
Confidence               579999999863   111  122335689999999999999999875  5899999987654432111 11111100


Q ss_pred             c-----cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 V-----QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~-----~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .     ...++...|+.||++.+.+++.++.+.   |+++++++||.+.+|....
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~  200 (337)
T 2c29_D          149 DMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMS  200 (337)
T ss_dssp             CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCS
T ss_pred             chhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCC
Confidence            0     000123469999999999988877653   8999999999999997543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.84  E-value=1.9e-20  Score=177.68  Aligned_cols=180  Identities=14%  Similarity=0.113  Sum_probs=137.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          58 VCIITGANSGIGYETAKELAKL-KATVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +++||||+|+||++++++|+++ |++|++++|+..  ..+. .+++.   ...++.++.+|++|.+++++++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 799999998642  1111 11111   1357889999999999999888752     


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc---C-------cEEEEcCcccccCCcC------
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI---Q-------KVVIVGSSLMDRGTID------  198 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l---~-------~iv~vsS~~~~~~~~~------  198 (384)
                      ++|+||||||....    +.+.++++..+++|+.++.++++++.+.|   +       ++|++||...+.....      
T Consensus        73 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           73 QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence            79999999997431    12456778899999999999999999874   2       8999999765432210      


Q ss_pred             ---cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         199 ---FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       199 ---~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         ...+.+....    .+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       149 ~~~~~~~~E~~~~----~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          149 SVTLPLFTETTAY----APSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             TSCCCCBCTTSCC----CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred             cccCCCCCCCCCC----CCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCC
Confidence               0012222211    256789999999999999999886   899999999999999854

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.83  E-value=2.6e-20  Score=175.77  Aligned_cols=189  Identities=16%  Similarity=0.137  Sum_probs=136.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +.++++++|+||||+|+||.+++++|+++|  ++|+..+|......  .+.+.......++.++++|++|.++++++++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            345778999999999999999999999999  67877777542111  11121222235789999999999999998876


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      .     ++|++||+||......    +.++++..+++|+.++..+++++.+.- +++|++||...+........+.+...
T Consensus        97 ~-----~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~  167 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHVDR----SIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETP  167 (346)
T ss_dssp             H-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSC
T ss_pred             c-----CCCEEEECCcccchhh----hhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCC
Confidence            4     6999999999854322    446677899999999999999998764 36999999876654432223333332


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .    .+...|+.||.+.+.+++.++.+.   |+++++++||.+.++...
T Consensus       168 ~----~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  210 (346)
T 4egb_A          168 L----APNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQY  210 (346)
T ss_dssp             C----CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred             C----CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCC
Confidence            2    255789999999999999998875   899999999999988653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-19  Score=172.69  Aligned_cols=184  Identities=15%  Similarity=0.054  Sum_probs=133.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ-EALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... +..+++.+..  .+.++.++.+|++|.++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865421 2222222111  1346888999999999999988765   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                        ++|++|||||.....    .+.++++..+++|+.++.++++++.+..    .++|++||...+.... ...+.+....
T Consensus        78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~-~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ-EIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC-SSSBCTTSCC
T ss_pred             --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCC-CCCCCccCCC
Confidence              689999999974322    2456678899999999999999999887    4899999987654322 1122222221


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                          .+...|+.||++.+.+++.++.++   |+.+..+.|..+..|..
T Consensus       151 ----~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~  191 (372)
T 1db3_A          151 ----YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRR  191 (372)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTS
T ss_pred             ----CCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCC
Confidence                145689999999999999999886   67777888877766543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.83  E-value=5.6e-20  Score=173.86  Aligned_cols=187  Identities=15%  Similarity=0.061  Sum_probs=146.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ---DGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+++|+++||||+|+||++++++|+++|++|++++|+........+.+.....   ..++.++++|++|.++++++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            35688999999999999999999999999999999987655555555543211   1578999999999998887765  


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                           ++|++||+||.....    .+.++.+..+++|+.++.++++++...- +++|++||...+..... ..+.+....
T Consensus       100 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~-~~~~E~~~~  169 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPA-LPKVEENIG  169 (351)
T ss_dssp             -----TCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC-SSBCTTCCC
T ss_pred             -----CCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCC-CCCccCCCC
Confidence                 799999999974321    1445677899999999999999998775 48999999876644322 222222221


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                          .+...|+.||.+.+.+++.++.+.   |++++.++||.+..+....
T Consensus       170 ----~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~  212 (351)
T 3ruf_A          170 ----NPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDP  212 (351)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCC
Confidence                255689999999999999999886   8999999999999886543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.83  E-value=1.4e-20  Score=171.30  Aligned_cols=165  Identities=18%  Similarity=0.194  Sum_probs=130.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+|+||++++++|+++|++|++++|+.++..           ..++.++.+|++|+++++++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999865311           1357888999999998887765       58


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++|||||..        +.+.++..+++|+.++.++++++.+.- +++|++||...+...+....+.+....    .+.
T Consensus        65 d~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~----~~~  132 (267)
T 3ay3_A           65 DGIIHLGGVS--------VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPR----RPD  132 (267)
T ss_dssp             SEEEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCC----CCC
T ss_pred             CEEEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCC----CCC
Confidence            9999999974        234567899999999999999998764 489999998776543322223332221    245


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCC
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC-YTN  254 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v-~T~  254 (384)
                      ..|+.||++.+.+++.++.+   .|+++++++||.+ .++
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKP  169 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSC
T ss_pred             ChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCC
Confidence            68999999999999988654   5899999999998 454

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.83  E-value=1.7e-20  Score=176.10  Aligned_cols=175  Identities=10%  Similarity=0.012  Sum_probs=130.0

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..+++++++++||||+|+||++++++|+++|++|++++|+.....+..+++      .++.++.+|++|.++++++++++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHHHHhhc
Confidence            346789999999999999999999999999999999999754322111111      36888999999999999888765


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCc-CCCCcCcC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDF-DNLNGEKG  207 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~-~~~~~~~~  207 (384)
                           ++|+||||||.....     +.++++  +++|+.++.++++++...- +++|++||...+...... ..+.+.. 
T Consensus        88 -----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~-  154 (330)
T 2pzm_A           88 -----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT-  154 (330)
T ss_dssp             -----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC-
T ss_pred             -----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC-
Confidence                 799999999975332     345555  9999999999999998754 489999998765432110 0122211 


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                           .+...|+.||++.+.+++.+       +++...++|+.+..|.
T Consensus       155 -----~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~  190 (330)
T 2pzm_A          155 -----APFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPR  190 (330)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTT
T ss_pred             -----CCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcC
Confidence                 14568999999999998876       4556666666655554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.83  E-value=3.7e-20  Score=176.00  Aligned_cols=182  Identities=16%  Similarity=0.020  Sum_probs=136.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH--CCCEEEEEecCchhHHHHH------HHHHHHhcCCcEEEEEeecCCHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAK--LKATVVLGCRSMIRGQEAL------EKLKKEVQDGQIVLMELNLASFDSIK  123 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~--~G~~Vi~~~r~~~~~~~~~------~~l~~~~~~~~~~~~~~Dvs~~~~v~  123 (384)
                      +++++|+|+||||+|+||++++++|++  +|++|++++|+........      ... ....+.++.++.+|++|+++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF-KNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG-GGGTTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh-hhccccCceEEECCCCCHHHHH
Confidence            467899999999999999999999999  9999999999764211000      000 0112346789999999999888


Q ss_pred             HHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCC
Q psy2854         124 NFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       124 ~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      ++      ...++|+||||||....      +.++++..+++|+.++.++++++...-.++|++||...+.....  .+.
T Consensus        85 ~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~--~~~  150 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA--PNV  150 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS--SBC
T ss_pred             Hh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC--CCC
Confidence            76      34589999999996322      44677889999999999999999877667999999665543322  233


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +....    .+...|+.||++.+.+++.++.+     +++..++|+.+..|...
T Consensus       151 E~~~~----~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          151 VGKNE----SPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             TTSCC----CCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCG
T ss_pred             CCCCC----CCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCC
Confidence            32221    25568999999999998887655     78889999988877654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.83  E-value=3.5e-20  Score=172.36  Aligned_cols=177  Identities=14%  Similarity=0.098  Sum_probs=133.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|......+   .+     ..++.++++|++|++++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999999885322111   01     135667899999999998887652     689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCC-cCcCCCCcCcCcccCCCCh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGT-IDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~  215 (384)
                      ++||+||.....    .+.++++..+++|+.|+.++++++.... +++|++||..+..+. .....+.+....    .+.
T Consensus        69 ~vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~----~~~  140 (311)
T 2p5y_A           69 HVSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPP----RPK  140 (311)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCC----CCC
T ss_pred             EEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCC----CCC
Confidence            999999974321    2456778899999999999999998764 489999998332222 111112222111    145


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..|+.||++.+.+++.++.++   |+++++++||.+.+|....
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~  180 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDP  180 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCS
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCC
Confidence            689999999999999998875   8999999999999987543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.83  E-value=1.5e-19  Score=170.66  Aligned_cols=169  Identities=11%  Similarity=0.017  Sum_probs=130.8

Q ss_pred             CCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          50 FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        50 ~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..++.++|+|+||||+|+||++++++|+++|++|++++|+.++              .++.++.+|++|.+++.++++  
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh--
Confidence            3356789999999999999999999999999999999998653              356788999999998887765  


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCC-cCcCCCCcCcC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGT-IDFDNLNGEKG  207 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~-~~~~~~~~~~~  207 (384)
                           ++|++||+||....      +.+.++..+++|+.++.++++++...- +++|++||...+... .....+.+...
T Consensus        77 -----~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  145 (347)
T 4id9_A           77 -----GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHP  145 (347)
T ss_dssp             -----TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSC
T ss_pred             -----CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCC
Confidence                 78999999997432      445568899999999999999998764 489999998665432 12222333322


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY  252 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~  252 (384)
                      .    .+...|+.||.+.+.+++.++.+.   |++++.++|+.+.
T Consensus       146 ~----~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          146 L----CPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             C----CCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             C----CCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence            2    256789999999999999998874   8999999999998

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.82  E-value=2.3e-19  Score=169.41  Aligned_cols=183  Identities=15%  Similarity=0.108  Sum_probs=138.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR------GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +|+++||||+|+||++++++|+++|++|++++|+...      ..+..+++.+.. +.++.++.+|++|.+++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5789999999999999999999999999999886432      233334443321 356888999999999988887652


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                           ++|++|||||......    +.++++..+++|+.++.++++++...- +++|++||...+... ....+.+....
T Consensus        81 -----~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~-~~~~~~E~~~~  150 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNP-QYLPLDEAHPT  150 (348)
T ss_dssp             -----CEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSC-SSSSBCTTSCC
T ss_pred             -----CCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCC-CCCCcCCCCCC
Confidence                 7999999999743221    345678899999999999999887654 489999997765432 11222222211


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .   +....|+.||++.+.+++.++.+  ..++++..++|+.+..+
T Consensus       151 ~---p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          151 G---GCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             C---CCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             C---CCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence            1   12568999999999999999887  34699999999998876

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.82  E-value=6.5e-20  Score=161.83  Aligned_cols=155  Identities=12%  Similarity=0.152  Sum_probs=123.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS-FDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~g~i  136 (384)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.          .++.++++|++| +++++++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            699999999999999999999999999999997643321          468899999999 888776653       69


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++|||||...            ...+++|+.++..+++++...- +++|++||..+..+.+.    .+ .    ...+.
T Consensus        65 d~vi~~ag~~~------------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~----~e-~----~~~~~  123 (219)
T 3dqp_A           65 DAIINVSGSGG------------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKW----IG-A----GFDAL  123 (219)
T ss_dssp             SEEEECCCCTT------------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGC----CS-H----HHHHT
T ss_pred             CEEEECCcCCC------------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcc----cc-c----ccccc
Confidence            99999999853            1278899999999999998764 48999999876543321    00 0    00136


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ..|+.+|++.+.+.+      ...|+++++++||.+.++..
T Consensus       124 ~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~  158 (219)
T 3dqp_A          124 KDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEA  158 (219)
T ss_dssp             HHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCC
T ss_pred             cHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCC
Confidence            789999999998876      35699999999999988753

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.82  E-value=1.7e-19  Score=159.30  Aligned_cols=152  Identities=13%  Similarity=0.114  Sum_probs=110.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELA-KLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~-~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|+++||||+||||++++++|+ ++|++|++++|+.+ ++++..    .  ...++.++++|++|+++++++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I--DHERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H--TSTTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c--CCCceEEEECCCCCHHHHHHHHc------
Confidence            4789999999999999999999 89999999999976 444322    1  14678999999999999888775      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                       ++|+||||||..                   |+. ...+++.+...- +++|++||..+..+.+...     ..+... 
T Consensus        73 -~~d~vv~~ag~~-------------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-----~~~~~~-  125 (221)
T 3r6d_A           73 -NAEVVFVGAMES-------------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-----EKWTFD-  125 (221)
T ss_dssp             -TCSEEEESCCCC-------------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-----HHHHHH-
T ss_pred             -CCCEEEEcCCCC-------------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-----cccccc-
Confidence             689999999963                   222 333344333322 3799999987765433100     000000 


Q ss_pred             CChh-hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         213 HSNP-AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       213 ~~~~-~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                       ... .|+.+|.+++.+.+.       .|+++++|+||++.++
T Consensus       126 -~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          126 -NLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYND  160 (221)
T ss_dssp             -TSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred             -ccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence             111 799999999887653       5999999999999887

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.82  E-value=1.5e-19  Score=170.64  Aligned_cols=179  Identities=14%  Similarity=0.131  Sum_probs=136.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchh-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIR-GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |+++||||+|+||++++++|+++  |++|++++|+... ..+..++    ....++.++.+|++|+++++++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA----ILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG----GCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh----hccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999997521 1111111    113578899999999998887764      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcC-----------cCCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTID-----------FDNL  202 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~-----------~~~~  202 (384)
                       .+|++|||||....    +.+.++++..+++|+.++.++++++.+.-.++|++||...+.....           ...+
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~  149 (348)
T 1oc2_A           75 -KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  149 (348)
T ss_dssp             -TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             -cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCc
Confidence             46999999997431    1134567889999999999999999987669999999875533210           0112


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .+....    .+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       150 ~E~~~~----~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          150 TAETNY----NPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQH  197 (348)
T ss_dssp             CTTSCC----CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCC
T ss_pred             CCCCCC----CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCC
Confidence            222211    255689999999999999999886   899999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.82  E-value=6.2e-20  Score=172.93  Aligned_cols=177  Identities=15%  Similarity=0.136  Sum_probs=132.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-------ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      .+++++++||||+|+||++++++|+++|       ++|++++|+.++...        ....++.++.+|++|+++++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHH
Confidence            4788999999999999999999999999       899999998643221        1135788899999999988877


Q ss_pred             HHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc------CcEEEEcCcccccCCcCc
Q psy2854         126 AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI------QKVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l------~~iv~vsS~~~~~~~~~~  199 (384)
                      ++      +++|++|||||....     .+.++++..+++|+.|+.++++++.+..      +++|++||...+..... 
T Consensus        83 ~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-  150 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP-  150 (342)
T ss_dssp             HH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC-
T ss_pred             Hh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC-
Confidence            65      479999999997431     2456788999999999999999998865      58999999876543211 


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEe--cCcccC
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVC--PGWCYT  253 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~--PG~v~T  253 (384)
                      ..+.+....    .+...|+.||++.+.+++.++.+..  ...+|++.|.  ||.+.+
T Consensus       151 ~~~~E~~~~----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          151 YPIPDEFHT----TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             SSBCTTCCC----CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             CCcCCCCCC----CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence            122222221    1456899999999999998887631  1224555554  655443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=2.7e-19  Score=167.95  Aligned_cols=183  Identities=15%  Similarity=0.023  Sum_probs=137.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ-EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      -.+++++||||+|+||++++++|+++|++|++++|+.++.. ...+.+.   ...++.++.+|++|.++++++++.+   
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc---
Confidence            35789999999999999999999999999999999865421 1111111   1346888999999999999888765   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                        ++|++||+||.....    .+.++++..+++|+.++.++++++.+.-  +++|++||...+..... ..+.+....  
T Consensus        86 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~-~~~~E~~~~--  156 (335)
T 1rpn_A           86 --QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA-ERQDENTPF--  156 (335)
T ss_dssp             --CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSS-SSBCTTSCC--
T ss_pred             --CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCC-CCCCcccCC--
Confidence              689999999974321    1234567899999999999999998874  58999999876544321 122222211  


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                        .+...|+.||++.+.+++.++.++   |+++..++|+.+..|..
T Consensus       157 --~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~  197 (335)
T 1rpn_A          157 --YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLR  197 (335)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTS
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCC
Confidence              145689999999999999998876   78899999999887754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=3.3e-19  Score=170.19  Aligned_cols=182  Identities=15%  Similarity=0.026  Sum_probs=136.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-----GQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     .+...++.... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999998543     11111111000 1346888999999999999888765  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----CcEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----QKVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----~~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                         ++|+||||||.....    .+.++++..+++|+.++.++++++.+..    +++|++||...+.... ...+.+...
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~-~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ-EIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS-SSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC-CCCCCccCC
Confidence               689999999974321    1346778899999999999999999886    5899999987764332 112222222


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .    .+...|+.||++.+.+++.++.++   |+++..+.|+.+..|..
T Consensus       174 ~----~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          174 F----YPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRR  215 (375)
T ss_dssp             C----CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             C----CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCC
Confidence            1    145689999999999999999876   78898899988776653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.81  E-value=1.9e-19  Score=174.97  Aligned_cols=186  Identities=12%  Similarity=0.059  Sum_probs=133.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh---HHHHHHHHHHH-------hcCCcEEEEEeecCCHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR---GQEALEKLKKE-------VQDGQIVLMELNLASFDS  121 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~---~~~~~~~l~~~-------~~~~~~~~~~~Dvs~~~~  121 (384)
                      .+..+|+|+||||+|+||++++++|+++|++|++++|+.+.   .+...+.+...       ....++.++.+|++|+++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            35678899999999999999999999999999999999873   23333333221       113679999999999887


Q ss_pred             HHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcC---
Q psy2854         122 IKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTID---  198 (384)
Q Consensus       122 v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~---  198 (384)
                      +.        ..+++|+||||||...       ..+.++..+++|+.++.++++++.+..+++|++||... .....   
T Consensus       145 l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~  208 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDT  208 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSC
T ss_pred             CC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCC
Confidence            76        4579999999999753       23567889999999999999999996668999999877 21110   


Q ss_pred             -cCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         199 -FDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       199 -~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                       -..+.+.... ....+...|+.||++.+.+++.++.    .|+++++++||.+.++....
T Consensus       209 ~~~~~~E~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          209 EDVTFSEADVY-KGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             SCCEECTTCSC-SSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSC
T ss_pred             CCccccccccc-cCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCC
Confidence             0111111111 1112567899999999999998764    58999999999999887543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.81  E-value=5.3e-20  Score=171.76  Aligned_cols=187  Identities=13%  Similarity=0.049  Sum_probs=125.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCR-SMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ||+++||||+|+||++++++|+++|++|+++.| +.+..++ ...+.... ...++.++++|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            579999999999999999999999999999888 6432110 01111100 01257788999999998887764      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcC-CCCcCcC---
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFD-NLNGEKG---  207 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~-~~~~~~~---  207 (384)
                       .+|+|||||+..   ...  ..+.+++.+++|+.|+.++++++.+.  .+++|++||..+..+.+... .+++...   
T Consensus        74 -~~d~vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~  147 (322)
T 2p4h_X           74 -GCVGIFHTASPI---DFA--VSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDV  147 (322)
T ss_dssp             -TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCH
T ss_pred             -CCCEEEEcCCcc---cCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccch
Confidence             579999999742   111  11224568999999999999999886  35899999987654432111 1111100   


Q ss_pred             -cccC-CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 -FVQK-GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 -~~~~-~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                       +..+ .+....|+.||++.+.+++.++.+   .|+++++++||.+.+++...
T Consensus       148 ~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~  197 (322)
T 2p4h_X          148 DLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCP  197 (322)
T ss_dssp             HHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSS
T ss_pred             hhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCC
Confidence             0000 001126999999888887766654   48999999999999997643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.81  E-value=3.2e-19  Score=167.85  Aligned_cols=171  Identities=14%  Similarity=0.048  Sum_probs=127.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      .+++||||+|+||++++++|+++|++|++++|+.++.++    +.    ..++.++.+|++|.++++++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            489999999999999999999999999999998765432    11    1257889999999998877654       68


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCC-
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS-  214 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (384)
                      |++||+||...      .+.++++..+++|+.++.++++++.+.- +++|++||...+..........+.....    + 
T Consensus        79 d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~----p~  148 (342)
T 2x4g_A           79 DGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYD----SL  148 (342)
T ss_dssp             SEEEEC------------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCS----SC
T ss_pred             CEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCC----cc
Confidence            99999999742      1345678899999999999999998875 5899999987765433211122221111    3 


Q ss_pred             ---hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         215 ---NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       215 ---~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                         ...|+.||++.+.+++.++.   . |+++++++||.+.++..
T Consensus       149 ~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          149 PSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred             ccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence               56899999999999999876   3 89999999999999875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.81  E-value=7.4e-19  Score=165.25  Aligned_cols=181  Identities=13%  Similarity=0.058  Sum_probs=131.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|......+..+++.+.. +.++.++.+|++|+++++++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            68999999999999999999999999998875332222233333221 346788999999999988877642     699


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      +||||||......    ..++.+..+++|+.++.++++++...- +++|++||...+... ....+.+....   .++..
T Consensus        76 ~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~-~~~~~~e~~~~---~~~~~  147 (338)
T 1udb_A           76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDN-PKIPYVESFPT---GTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC-CSSSBCTTSCC---CCCSS
T ss_pred             EEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCC-CCCCcCcccCC---CCCCC
Confidence            9999999743211    234567789999999999999887653 589999997655322 11112222111   01356


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .|+.||++.+.+++.++.+.  .|+++..++|+.+..+
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            89999999999999999874  4799999999877544

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.81  E-value=3.1e-19  Score=167.75  Aligned_cols=178  Identities=16%  Similarity=0.126  Sum_probs=134.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC---C---CEEEEEecCchhH-HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKL---K---ATVVLGCRSMIRG-QEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~---G---~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++||||+|+||++++++|+++   |   ++|++++|+.... .+..+++   ....++.++.+|++|++++++++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV---DADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG---TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc---ccCCCeEEEEcCCCCHHHHHHHh----
Confidence            6999999999999999999997   8   9999999864211 1111111   11357889999999998887765    


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                         +++|++|||||....    +.+.++++..+++|+.++.++++++.+... ++|++||...+..... ..+.+.... 
T Consensus        75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~-~~~~E~~~~-  145 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS-GSWTESSPL-  145 (337)
T ss_dssp             ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS-SCBCTTSCC-
T ss_pred             ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCC-CCCCCCCCC-
Confidence               479999999997432    113456778999999999999999998764 8999999876543211 122222221 


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         .+...|+.||++.+.+++.++.++   |++++.++||.+.++...
T Consensus       146 ---~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          146 ---EPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCC
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCC
Confidence               255689999999999999999876   899999999999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.81  E-value=3.2e-19  Score=170.60  Aligned_cols=182  Identities=13%  Similarity=0.028  Sum_probs=137.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +.++++++||||+|+||++++++|+++|++|++++|+..+....        ...++.++.+|++|.++++++++     
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFHLVDLRVMENCLKVTE-----   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--------GGTCSEEEECCTTSHHHHHHHHT-----
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh--------ccCCceEEECCCCCHHHHHHHhC-----
Confidence            44678999999999999999999999999999999986542211        02367889999999998887764     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCc----CCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDF----DNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~----~~~~~~~~  207 (384)
                        ++|++||+||.......   +.++++..+++|+.++.++++++.... +++|++||...+......    ..+.+...
T Consensus        93 --~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~  167 (379)
T 2c5a_A           93 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDA  167 (379)
T ss_dssp             --TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             --CCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccC
Confidence              68999999997432111   135677899999999999999998764 489999997665432110    01111110


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .  ...+...|+.||++.+.+++.++.+.   |+++++++||.+.++...
T Consensus       168 ~--~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          168 W--PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             S--SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSC
T ss_pred             C--CCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCC
Confidence            0  11255689999999999999998875   899999999999998654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.80  E-value=2.8e-19  Score=166.15  Aligned_cols=173  Identities=19%  Similarity=0.110  Sum_probs=134.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+..        ...+.++.+|++|.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999765432211        356788999999987 554432       3 


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++||+||....    ..+.++++..+++|+.++.++++++...- +++|++||...+.... ...+.+....    .+.
T Consensus        64 d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~-~~~~~e~~~~----~p~  134 (312)
T 3ko8_A           64 DVVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDAD-VIPTPEEEPY----KPI  134 (312)
T ss_dssp             SEEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS-SSSBCTTSCC----CCC
T ss_pred             CEEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCC-CCCCCCCCCC----CCC
Confidence            999999996322    23566778899999999999999998764 3899999987654332 2223333222    256


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..|+.||++.+.+++.++.++   |+++++++||.+.+|....
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~  174 (312)
T 3ko8_A          135 SVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRH  174 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCS
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCC
Confidence            789999999999999999987   8999999999999987543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=6.7e-19  Score=168.40  Aligned_cols=179  Identities=17%  Similarity=0.064  Sum_probs=133.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR-----GQEALEKLKKEVQDG-QIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      |+++||||+|+||++++++|+++|++|++++|+.++     ++...+++...  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22211111110  12 6888999999999999888765 


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-C-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-Q-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                          ++|+||||||.....    .+.++++..+++|+.++.++++++.+.. +     ++|++||...+.....  .+.+
T Consensus       106 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~--~~~E  175 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP--PQSE  175 (381)
T ss_dssp             ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS--SBCT
T ss_pred             ----CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC--CCCC
Confidence                789999999974321    2356788899999999999999999875 2     8999999876544322  2222


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ....    .+...|+.||++.+.+++.++.++   |+.+..+.|+.+..|.
T Consensus       176 ~~~~----~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~  219 (381)
T 1n7h_A          176 TTPF----HPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR  219 (381)
T ss_dssp             TSCC----CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCC----CCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCC
Confidence            2221    255689999999999999999876   6766666666555543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.80  E-value=3.1e-19  Score=158.15  Aligned_cols=164  Identities=11%  Similarity=0.035  Sum_probs=127.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+..         ..++.++++|++|.++++++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999997654221         2578899999999999888775       58


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++|||||....      .    ...+++|+.++.++++++.+.- +++|++||.....+.+...  ....    +..+.
T Consensus        69 d~vi~~a~~~~~------~----~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~--~~~~----~~~p~  132 (227)
T 3dhn_A           69 DAVISAFNPGWN------N----PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR--LMDS----GEVPE  132 (227)
T ss_dssp             SEEEECCCC----------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE--GGGT----TCSCG
T ss_pred             CEEEEeCcCCCC------C----hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc--cccC----CcchH
Confidence            999999986411      1    1278899999999999998765 4899999987665433111  0111    11256


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ..|+.+|++.+.+.+.++.   ..|++++.++||.+.++.
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~  169 (227)
T 3dhn_A          133 NILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPG  169 (227)
T ss_dssp             GGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESC
T ss_pred             HHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCC
Confidence            7899999999988887765   359999999999998775

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.80  E-value=2.4e-19  Score=171.35  Aligned_cols=182  Identities=12%  Similarity=0.072  Sum_probs=134.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++++++||||+|+||++++++|+++| ++|++++|+.....+...      ...++.++.+|++|+++++++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------CCCceEEEECCCCCHHHHHHHhh----
Confidence            4678999999999999999999999999 999999998643221110      13578899999999987776543    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCcCcCCCC--cCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTIDFDNLN--GEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~~~~~~~--~~~~  207 (384)
                         ++|++||+||.....    .+.++++..+++|+.++.++++++...  .+++|++||...+.... ...+.  +.. 
T Consensus        99 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~~~~E~~-  169 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKT-FDDAKATEET-  169 (377)
T ss_dssp             ---CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC---------------CCC-
T ss_pred             ---CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCC-CCCcCccccc-
Confidence               799999999974321    134567889999999999999999876  45899999976553321 11111  111 


Q ss_pred             cccCC-CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         208 FVQKG-HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       208 ~~~~~-~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...+. .+...|+.||++.+.+++.++.+.   |+++++++||.+.++..
T Consensus       170 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          170 DIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             ccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            00011 245689999999999999998876   89999999999998865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.80  E-value=5.9e-19  Score=165.76  Aligned_cols=172  Identities=15%  Similarity=0.038  Sum_probs=126.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +..+++++++||||+|+||++++++|+++|++|++++|+.....+...+      -.++.++.+|++|+++++++++.  
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~------~~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD------HPNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC------CTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh------cCCceEEEEeCCCHHHHHHHHhc--
Confidence            3567889999999999999999999999999999999975432111110      14688899999999999888775  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccC---CcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRG---TIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~---~~~~~~~~~~~  206 (384)
                         +++|+||||||.....     +.++++  +++|+.++.++++++.+.- +++|++||...+..   .... .+++..
T Consensus        88 ---~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~  156 (333)
T 2q1w_A           88 ---LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR  156 (333)
T ss_dssp             ---HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC
T ss_pred             ---cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC
Confidence               2799999999975432     334444  9999999999999998864 48999999776541   1111 222221


Q ss_pred             CcccCCCCh-hhhhhcHHHHHHHHHH-HHHHhCCCCcEEEEEecCcccCCc
Q psy2854         207 GFVQKGHSN-PAYCNSKLMNYYFGAE-LYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       207 ~~~~~~~~~-~~Y~aSK~a~~~~~~~-la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                            .+. ..|+.||++.+.+++. ++        ++..++|+.+..+.
T Consensus       157 ------~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          157 ------NPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPR  193 (333)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTT
T ss_pred             ------CCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcC
Confidence                  134 6899999999999877 54        67889999888776

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.79  E-value=6.7e-19  Score=167.80  Aligned_cols=183  Identities=13%  Similarity=0.078  Sum_probs=137.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA-SFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~i  129 (384)
                      .+|++++|+||||+|+||++++++|+++ |++|++++|+.++.....       ...++.++.+|++ |.++++++++  
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-------KHERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-------GSTTEEEEECCTTTCHHHHHHHHH--
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-------cCCCeEEEeCccCCCHHHHHHHhc--
Confidence            4578899999999999999999999998 999999999875543321       1357899999999 9998888776  


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCc-
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGF-  208 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~-  208 (384)
                           ++|++||+||......    ..++.+..+++|+.++.++++++...-+++|++||...+.... ...+.+.... 
T Consensus        91 -----~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~-~~~~~e~~~~~  160 (372)
T 3slg_A           91 -----KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCA-DEQFDPDASAL  160 (372)
T ss_dssp             -----HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCC-CSSBCTTTCCE
T ss_pred             -----cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCC-CCCCCcccccc
Confidence                 5899999999854321    2345667899999999999999987768899999976554322 1122222110 


Q ss_pred             --ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 --VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 --~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                        .....+...|+.||.+.+.+++.++.+    |+++++++|+.+..+...
T Consensus       161 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          161 TYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             EECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCC
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcc
Confidence              001125568999999999999888765    899999999999888654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.79  E-value=2e-19  Score=169.10  Aligned_cols=185  Identities=12%  Similarity=0.022  Sum_probs=128.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE--ALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +|+++||||+|+||++++++|+++|++|+++.|+.++..+  ...++.   ...++.++++|++|+++++++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ---ELGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG---GGSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC---CCCcEEEEecCCCChHHHHHHHc------
Confidence            6899999999999999999999999999998998654321  112221   12468889999999988877664      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCc---CCCCcCcC-
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDF---DNLNGEKG-  207 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~---~~~~~~~~-  207 (384)
                       ++|++||+||...   ..  ..+..++.+++|+.|+.++++++.+..  +++|++||.++..+.+..   ..+++... 
T Consensus        80 -~~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~  153 (338)
T 2rh8_A           80 -GCDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWT  153 (338)
T ss_dssp             -TCSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTT
T ss_pred             -CCCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhcc
Confidence             5899999998631   11  112224589999999999999999874  589999998743322110   01222110 


Q ss_pred             ---cccCC-CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 ---FVQKG-HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ---~~~~~-~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         +..+. +....|+.||++.+.+++.++.+.   |+++++++||.+.+|....
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~  205 (338)
T 2rh8_A          154 DIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTS  205 (338)
T ss_dssp             CC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSS
T ss_pred             chhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCC
Confidence               00000 011269999999999888877653   8999999999999997643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.79  E-value=2.1e-18  Score=161.53  Aligned_cols=174  Identities=14%  Similarity=0.054  Sum_probs=135.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++||||+|+||++++++|+++|++|++++|+.....+       .. ..++.++.+|++|.+++++++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-------AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-------hc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            579999999999999999999999999999987543221       11 13678899999999998888765     379


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++||+||......    +.++++..+++|+.++.++++++...- +++|++||...+... ....+.+....    .+.
T Consensus        69 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~-~~~~~~E~~~~----~~~  139 (330)
T 2c20_A           69 EAVMHFAADSLVGV----SMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEV-DVDLITEETMT----NPT  139 (330)
T ss_dssp             EEEEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSC-SSSSBCTTSCC----CCS
T ss_pred             CEEEECCcccCccc----cccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCC-CCCCCCcCCCC----CCC
Confidence            99999999743211    346778899999999999999987654 489999997665432 11122222221    255


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ..|+.||++.+.+++.++.++   |+++++++||.+.++.
T Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          140 NTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            789999999999999998764   8999999999998874

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.78  E-value=2e-18  Score=162.66  Aligned_cols=184  Identities=13%  Similarity=0.084  Sum_probs=131.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +.++++++++||||+|+||++++++|+++|++|++++|+.....+..+.+   ....++.++.+|+++..          
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL----------   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC----------
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh----------
Confidence            34578899999999999999999999999999999999754322111111   11356889999998753          


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCc-Ccc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEK-GFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~-~~~  209 (384)
                        +.++|++||+||......    ..++++..+++|+.++.++++++.+.-.++|++||...+.... ...+.+.. ...
T Consensus        89 --~~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~-~~~~~E~~~~~~  161 (343)
T 2b69_A           89 --YIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPE-VHPQSEDYWGHV  161 (343)
T ss_dssp             --CCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCS-SSSBCTTCCCBC
T ss_pred             --hcCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCC-CCCCcccccccC
Confidence              457999999999743221    1234567899999999999999987766899999976553321 11122210 000


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .+..+...|+.||++.+.+++.++.+.   |+++++++||.+.++...
T Consensus       162 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~  206 (343)
T 2b69_A          162 NPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMH  206 (343)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCC
Confidence            112256789999999999999998775   899999999999988654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.78  E-value=1e-18  Score=162.25  Aligned_cols=174  Identities=18%  Similarity=0.114  Sum_probs=134.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +++++||||+|+||++++++|+++  |++|++++|+..+.+     +.     .++.++.+|++|.+++++++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            468999999999999999999999  899999999865521     11     13567899999999988887653    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                       ++|++||+||.....     ..++.+..+++|+.++.++++++.+.- +++|++||...+.+........+...    .
T Consensus        68 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~----~  137 (312)
T 2yy7_A           68 -KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTI----M  137 (312)
T ss_dssp             -TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCB----C
T ss_pred             -CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCc----C
Confidence             699999999974221     235677899999999999999998764 48999999876654321111222211    1


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+...|+.||++.+.+++.++.++   |+++++++||.+..+..
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~  178 (312)
T 2yy7_A          138 EPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWST  178 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSS
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCC
Confidence            245689999999999999998775   89999999999988653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.78  E-value=3e-18  Score=176.65  Aligned_cols=188  Identities=17%  Similarity=0.127  Sum_probs=137.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+..+++... ...++.++.+|++|++++++++++.  
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~--   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL-TKHHIPFYEVDLCDRKGLEKVFKEY--   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH-HTSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc-cCCceEEEEcCCCCHHHHHHHHHhC--
Confidence            4577899999999999999999999999999999999765433333333322 1356788999999999988887643  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcC---cCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTID---FDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~---~~~~~~~~~  207 (384)
                         ++|+||||||......    ..+..+..+++|+.++.++++++...- +++|++||.+.+.....   ...+.+...
T Consensus        84 ---~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~  156 (699)
T 1z45_A           84 ---KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECP  156 (699)
T ss_dssp             ---CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             ---CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCC
Confidence               7999999999743221    123345689999999999999887654 58999999876533211   111222111


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                          ..+...|+.||++++.+++.++.+. ..|+++.+++|+.+..+
T Consensus       157 ----~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          157 ----LGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             ----CCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                1145689999999999999998875 46899999999988765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.78  E-value=6.7e-19  Score=166.91  Aligned_cols=180  Identities=13%  Similarity=0.064  Sum_probs=132.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++++++||||+|+||++++++|+++| ++|++++|+.....  .+.+      ..+. +.+|++|.++++++++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~------~~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL------VDLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT------TTSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc------cCce-EeeecCcHHHHHHHHhh--c
Confidence            4667899999999999999999999999 89999999765421  1111      1122 67899999888877653  1


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      .++++|++||+||....      +.++++..+++|+.++.++++++.+.-.++|++||...+.... ...+.+....   
T Consensus       112 ~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~-~~~~~E~~~~---  181 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRT-SDFIESREYE---  181 (357)
T ss_dssp             CCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCS-SCCCSSGGGC---
T ss_pred             ccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCC-CCCcCCcCCC---
Confidence            35689999999997433      3345778999999999999999987644999999987654322 1122222211   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                       .+...|+.||++.+.+++.++.++   |+++++++||.+.++...
T Consensus       182 -~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          182 -KPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCT
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCC
Confidence             145689999999999999988763   899999999999988643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.78  E-value=3.2e-18  Score=148.96  Aligned_cols=152  Identities=14%  Similarity=0.040  Sum_probs=118.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++++++||||+|+||++++++|+++|++|++++|+.++.+..        ...++.++++|++|+++++++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            347899999999999999999999999999999987653211        13468889999999998887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      .+|++|||||....   .  +      ..++|+.++..+++++.+.. +++|++||..........         .   .
T Consensus        67 ~~d~vi~~a~~~~~---~--~------~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~---------~---~  123 (206)
T 1hdo_A           67 GQDAVIVLLGTRND---L--S------PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV---------P---P  123 (206)
T ss_dssp             TCSEEEECCCCTTC---C--S------CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS---------C---G
T ss_pred             CCCEEEECccCCCC---C--C------ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc---------c---c
Confidence            57999999997432   1  1      12488999999999988764 489999998654332210         0   0


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWC  251 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v  251 (384)
                      +...|+.+|++++.+.+.       .|+++++++||.+
T Consensus       124 ~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~  154 (206)
T 1hdo_A          124 RLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHI  154 (206)
T ss_dssp             GGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEE
T ss_pred             cchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcc
Confidence            456899999999988742       5899999999998

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.78  E-value=2.5e-18  Score=160.03  Aligned_cols=162  Identities=17%  Similarity=0.103  Sum_probs=98.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.            +  +  ++.+|++|+++++++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999987432            0  1  5789999999988888765     6


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      +|++|||||.....    .+.++++..+++|+.++.++++++.+.-.++|++||...+.+.  ...+.+....    .+.
T Consensus        61 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~--~~~~~E~~~~----~~~  130 (315)
T 2ydy_A           61 PHVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT--NPPYREEDIP----APL  130 (315)
T ss_dssp             CSEEEECC-----------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSS--SCSBCTTSCC----CCC
T ss_pred             CCEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCC--CCCCCCCCCC----CCc
Confidence            99999999974321    2456788899999999999999999876699999998876541  1122222211    245


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ..|+.||++.+.+++.++.       ++..++|+.+..+.
T Consensus       131 ~~Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~  163 (315)
T 2ydy_A          131 NLYGKTKLDGEKAVLENNL-------GAAVLRIPILYGEV  163 (315)
T ss_dssp             SHHHHHHHHHHHHHHHHCT-------TCEEEEECSEECSC
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCC
Confidence            6899999999999988642       33566777666443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.78  E-value=2.4e-18  Score=162.03  Aligned_cols=179  Identities=13%  Similarity=0.066  Sum_probs=133.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF-DSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~~~~g  134 (384)
                      ++++||||+|+||++++++|+++ |++|++++|+.++.++..       ...++.++++|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 899999999876543211       135788999999984 55666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCc---ccC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGF---VQK  211 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~---~~~  211 (384)
                      ++|++||+||...+..    ..++++..+++|+.++.++++++.+.-+++|++||...+..... ..+.+....   ...
T Consensus        67 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~-~~~~e~~~~~~~~~~  141 (345)
T 2bll_A           67 KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSD-KYFDEDHSNLIVGPV  141 (345)
T ss_dssp             HCSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCC-SSBCTTTCCCBCCCT
T ss_pred             CCCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCC-CCcCCcccccccCcc
Confidence            4799999999743211    23456778999999999999999876678999999876543221 112222110   000


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ..+...|+.||++.+.+++.++.+.   |+++++++||.+.++...
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~  184 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLD  184 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCC
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcc
Confidence            1244589999999999999998875   899999999999988753

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.78  E-value=1.7e-19  Score=158.41  Aligned_cols=150  Identities=13%  Similarity=0.052  Sum_probs=122.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.++            ...++.++.+|++|++++++++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh------
Confidence            467999999999999999999999998  99999998754            1246788899999887665543      


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                         +|++|||||....      +.++++..+++|+.++..+++++.+.. +++|++||......                
T Consensus        66 ---~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~----------------  120 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK----------------  120 (215)
T ss_dssp             ---CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT----------------
T ss_pred             ---hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC----------------
Confidence               8999999997421      245677889999999999999998764 37999999765432                


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcE-EEEEecCcccCCcc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVD-VSVVCPGWCYTNLF  256 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~-v~~v~PG~v~T~~~  256 (384)
                        +...|+.+|++++.+.+.       .|++ ++.++||.+.++..
T Consensus       121 --~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A          121 --SSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             --CSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred             --CccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence              335799999999988764       3898 99999999998864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.78  E-value=2.3e-18  Score=160.11  Aligned_cols=172  Identities=15%  Similarity=0.095  Sum_probs=130.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+|+||++++++|+++|..|++..|+....+.         ....+.++.+|++| +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF---------VNEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG---------SCTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh---------cCCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            479999999999999999999999556555554332211         13468889999999 87777664       78


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++||+||....    ..+.++++..+++|+.++.++++++...- +++|++||...+.... ...+.+....    .+.
T Consensus        65 d~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~-~~~~~E~~~~----~~~  135 (313)
T 3ehe_A           65 EEVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAK-VIPTPEDYPT----HPI  135 (313)
T ss_dssp             SEEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCS-SSSBCTTSCC----CCC
T ss_pred             CEEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCC-CCCCCCCCCC----CCC
Confidence            999999996322    23567788899999999999999987764 4899999987654322 1222222222    256


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ..|+.||++.+.+++.++.++   |+++++++|+.+.++...
T Consensus       136 ~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  174 (313)
T 3ehe_A          136 SLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRST  174 (313)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCC
Confidence            789999999999999999886   899999999999988644

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.77  E-value=1.6e-18  Score=153.20  Aligned_cols=163  Identities=11%  Similarity=0.022  Sum_probs=116.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|+.++..+.        ...++.++++|++|+++         +.++++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~---------~~~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTE---------ADLDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCH---------HHHTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccH---------hhcccCC
Confidence            599999999999999999999999999999996554322        13578899999999887         2235799


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++|||||.....       +    ...+|+.++..+++++...-+++|++||..+..+..............  ..+...
T Consensus        65 ~vi~~ag~~~~~-------~----~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~--~~~~~~  131 (224)
T 3h2s_A           65 AVVDALSVPWGS-------G----RGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPES--AASQPW  131 (224)
T ss_dssp             EEEECCCCCTTS-------S----CTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGG--GGGSTT
T ss_pred             EEEECCccCCCc-------c----hhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCC--Cccchh
Confidence            999999985211       1    135688888887777765556899999987655433211000000010  012567


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      |+.+|++.+.+    .......|++++.++||.+.++
T Consensus       132 y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          132 YDGALYQYYEY----QFLQMNANVNWIGISPSEAFPS  164 (224)
T ss_dssp             HHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCC
T ss_pred             hHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCC
Confidence            99999988854    2222467999999999999987

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.77  E-value=6.1e-18  Score=166.59  Aligned_cols=183  Identities=15%  Similarity=0.158  Sum_probs=133.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC---CCEEEEEecCchhHHHHHHHHHHHhc--------------CCcEEEEEee
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL---KATVVLGCRSMIRGQEALEKLKKEVQ--------------DGQIVLMELN  115 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~D  115 (384)
                      ..++|+|+||||+|+||++++++|+++   |++|++++|+.+.. +..+.+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            467899999999999999999999999   99999999987643 23333333222              2689999999


Q ss_pred             cC------CHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEc
Q psy2854         116 LA------SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVG  188 (384)
Q Consensus       116 vs------~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vs  188 (384)
                      ++      |.++++++++       ++|++|||||....        +.++..+++|+.++.++++++.... +++|++|
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iS  213 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALTTKLKPFTYVS  213 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence            99      5556666554       58999999998543        3345688999999999999988765 4899999


Q ss_pred             CcccccCCcCcCCCCcCcCccc-------CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         189 SSLMDRGTIDFDNLNGEKGFVQ-------KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       189 S~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |...+.... ...+.+......       .......|+.||.+.+.+++.++.+.   |+++++++||.|..+-
T Consensus       214 S~~v~~~~~-~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          214 TADVGAAIE-PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             EGGGGTTSC-TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             ehhhcCccC-CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            976543221 112222211100       00112459999999999999998865   8999999999998763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.76  E-value=2.2e-17  Score=153.43  Aligned_cols=167  Identities=14%  Similarity=0.052  Sum_probs=129.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++++||||+|+||++++++|+++|++|++++|+....+  .+         ++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN---------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC---------ceEEEEcccc-HHHHHHhhc-------C
Confidence            368999999999999999999999999999999843322  11         5788999999 888777654       7


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      +|++||+||.....        +.+..+++|+.++.++++++...- +++|++||...+.... ...+.+....    .+
T Consensus        63 ~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~-~~~~~E~~~~----~p  129 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDET-SLPWNEKELP----LP  129 (311)
T ss_dssp             CSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGG-GCSBCTTSCC----CC
T ss_pred             CCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCC-CCCCCCCCCC----CC
Confidence            99999999985432        445678999999999999998764 4699999976554322 1222322221    25


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ...|+.||.+.+.+++.++.+   .|++++.++||.+.++...
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC-
T ss_pred             CchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCC
Confidence            568999999999999998886   4899999999999988654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.76  E-value=4.8e-18  Score=158.18  Aligned_cols=167  Identities=17%  Similarity=0.203  Sum_probs=127.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++||||+|+||++++++|+++  |++|++++|+....+             ++.++.+|++|++++++++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999998  899999998754321             3567899999999998887642     7


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      +|++||+||....     ...++++..+++|+.++.++++++.+.- +++|++||...+.+........+...    ..+
T Consensus        63 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~----~~p  133 (317)
T 3ajr_A           63 IDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITI----TRP  133 (317)
T ss_dssp             CCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSC----CCC
T ss_pred             CcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCcccccc----CCC
Confidence            9999999997421     1245677899999999999999998764 48999999877654321111111111    125


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      ...|+.||++.+.+++.++.+.   |+++++++|+.+..+
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          134 RTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISY  170 (317)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECS
T ss_pred             CchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEecc
Confidence            6789999999999999988764   899999987665543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.76  E-value=5.1e-18  Score=149.46  Aligned_cols=159  Identities=14%  Similarity=0.129  Sum_probs=111.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.         ..++.++++|++|+++         +.++++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~D~~d~~~---------~~~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT---------HKDINILQKDIFDLTL---------SDLSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH---------CSSSEEEECCGGGCCH---------HHHTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc---------cCCCeEEeccccChhh---------hhhcCCC
Confidence            589999999999999999999999999999997654332         1467889999999887         1225799


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++|||||....             ...+|+.++..+++++... ..++|++||..+..+.+..........    ..+..
T Consensus        64 ~vi~~ag~~~~-------------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~----~~~~~  126 (221)
T 3ew7_A           64 VVVDAYGISPD-------------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKG----LREAP  126 (221)
T ss_dssp             EEEECCCSSTT-------------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-----------------------CC
T ss_pred             EEEECCcCCcc-------------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCC----CCCHH
Confidence            99999998321             2456888888888887766 458999999877655432111111111    11345


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .|+.+|.+.+.+. .+..  ...|++++.++||.+.++
T Consensus       127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCC
T ss_pred             HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecC
Confidence            6999999988862 2322  156999999999999987

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.74  E-value=3.8e-17  Score=152.35  Aligned_cols=169  Identities=15%  Similarity=0.099  Sum_probs=128.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+++++||||+|+||++++++|+++|++|++++|+.                      .+|++|.+++++++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            467899999999999999999999999999888762                      27999999998887754     


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      ++|++||+||......   ...++.+..+++|+.++.++++++.+.- +++|++||...+.... ...+.+.........
T Consensus        55 ~~d~vih~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~-~~~~~E~~~~~~~~~  130 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLA-KQPMAESELLQGTLE  130 (321)
T ss_dssp             CCSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTC-CSSBCGGGTTSSCCC
T ss_pred             CCCEEEEcCeecCCcc---hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCC-CCCcCccccccCCCC
Confidence            6999999999743111   1244567889999999999999998764 4899999987654321 111222211000111


Q ss_pred             C-hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         214 S-NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       214 ~-~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      + ...|+.||.+.+.+++.++.+.   |+++++++||.+..+...
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCC
Confidence            2 3589999999999999998775   899999999999988654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.74  E-value=1.5e-17  Score=153.09  Aligned_cols=157  Identities=22%  Similarity=0.296  Sum_probs=123.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      -..++++||||+|+||++++++|+++|++|++++|+                       .+|++|.++++++++..    
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~----   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK----   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc----
Confidence            346799999999999999999999999999999886                       27999999998888765    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                       ++|++|||||....    +.+.++++..+++|+.++.++++++.+.-.++|++||...+.+... ..+.+....    .
T Consensus        63 -~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~-~~~~E~~~~----~  132 (292)
T 1vl0_A           63 -KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAK-EPITEFDEV----N  132 (292)
T ss_dssp             -CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCS-SCBCTTSCC----C
T ss_pred             -CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCC-CCCCCCCCC----C
Confidence             79999999997432    1134678889999999999999999887569999999876544321 122222211    1


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      +...|+.||++.+.+++.++.       .+..++|+.+.++
T Consensus       133 ~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          133 PQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD  166 (292)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred             CccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence            456899999999999887642       4788999999877

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.73  E-value=2e-17  Score=169.24  Aligned_cols=183  Identities=13%  Similarity=0.062  Sum_probs=136.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDS-IKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~i~  130 (384)
                      .+++++++||||+|+||++++++|+++ |++|++++|+.++.++.       ....++.++.+|++|.++ ++++++   
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc---
Confidence            357899999999999999999999998 89999999987553221       113578899999999764 555543   


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCc--
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGF--  208 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~--  208 (384)
                          ++|++|||||......    ..++++..+++|+.++.++++++.+.-+++|++||...+..... ..+.+....  
T Consensus       382 ----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~-~~~~E~~~~~~  452 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSD-KYFDEDHSNLI  452 (660)
T ss_dssp             ----HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCS-SSBCTTTCCEE
T ss_pred             ----CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCC-cccCCCccccc
Confidence                5899999999743211    23456789999999999999999877678999999876543221 112222110  


Q ss_pred             -ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         209 -VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       209 -~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                       .....+...|+.||++.+.+++.++.+.   |+++++++||.+.++...
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSS
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCcc
Confidence             0001245589999999999999998875   899999999999988753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.73  E-value=1.5e-17  Score=148.38  Aligned_cols=156  Identities=12%  Similarity=0.102  Sum_probs=100.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+..|+++||||+||||++++++|+++| ++|++++|+.++.++.        ...++.++++|++|+++++++++    
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~----   87 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ----   87 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT----
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc----
Confidence            4557899999999999999999999999 8999999997654321        13478899999999999888775    


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh-cCcEEEEcCcccccCCcCcC-CCCcCcCcc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER-IQKVVIVGSSLMDRGTIDFD-NLNGEKGFV  209 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~iv~vsS~~~~~~~~~~~-~~~~~~~~~  209 (384)
                         ++|+||||||..        +.+          ...-.+++++... .++||++||...+.+.+... ......   
T Consensus        88 ---~~D~vv~~a~~~--------~~~----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~---  143 (236)
T 3qvo_A           88 ---GQDIVYANLTGE--------DLD----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV---  143 (236)
T ss_dssp             ---TCSEEEEECCST--------THH----------HHHHHHHHHHHHTTCCEEEEECCCCC------------------
T ss_pred             ---CCCEEEEcCCCC--------chh----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc---
Confidence               579999999851        111          1111333333332 23799999987765433110 000000   


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                       .......|..+|.+           +.+.||++++|+||++.|+..
T Consensus       144 -~~~~~~~~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          144 -IGEPLKPFRRAADA-----------IEASGLEYTILRPAWLTDEDI  178 (236)
T ss_dssp             --CGGGHHHHHHHHH-----------HHTSCSEEEEEEECEEECCSC
T ss_pred             -ccchHHHHHHHHHH-----------HHHCCCCEEEEeCCcccCCCC
Confidence             00123345444332           236799999999999988753

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.73  E-value=1.1e-17  Score=155.16  Aligned_cols=175  Identities=13%  Similarity=0.059  Sum_probs=129.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      +++||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|++|.++++++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            38999999999999999999999 89999999765421  11111    1  12 678999988877765421  02369


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      |++||+||....      +.++++..+++|+.++.++++++.+.-.++|++||...+.... ...+.+...    ..+..
T Consensus        70 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~-~~~~~E~~~----~~p~~  138 (310)
T 1eq2_A           70 EAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRT-SDFIESREY----EKPLN  138 (310)
T ss_dssp             CEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCC-SCBCSSGGG----CCCSS
T ss_pred             cEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCC-CCCCCCCCC----CCCCC
Confidence            999999997433      3345678899999999999999987644999999987654322 111222211    12456


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      .|+.||.+.+.+++.++.+   .|+++++++||.+.++...
T Consensus       139 ~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          139 VYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCG
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCC
Confidence            8999999999999988765   4899999999999988643

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.73  E-value=1.7e-17  Score=152.27  Aligned_cols=155  Identities=18%  Similarity=0.211  Sum_probs=123.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+++|++|++++|.                       ++|++|.+++++++++.     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999982                       27999999999888765     799


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+||......    ..++++..+++|+.++.++++++.+.-.++|++||...+.+... ..+.+....    .+...
T Consensus        59 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~-~~~~E~~~~----~p~~~  129 (287)
T 3sc6_A           59 IIIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRP-EGYDEFHNP----APINI  129 (287)
T ss_dssp             EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCS-SCBCTTSCC----CCCSH
T ss_pred             EEEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCC-CCCCCCCCC----CCCCH
Confidence            9999999854211    23567889999999999999999887668999999876544321 223332221    25668


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      |+.||.+.+.+++.++.       +++.++|+.+..+..
T Consensus       130 Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~  161 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYG  161 (287)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSS
T ss_pred             HHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCC
Confidence            99999999999887643       468899999988753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.73  E-value=2.1e-17  Score=150.36  Aligned_cols=154  Identities=19%  Similarity=0.182  Sum_probs=118.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|++ |++|++++|+.+..           .+     +.+|++|+++++++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            589999999999999999994 89999999986420           11     789999999999988765     699


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++|||||.....    .+.+++++.+++|+.++.++++++.+.-.++|++||...+.+...  .+.+....    .+...
T Consensus        60 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~--~~~e~~~~----~~~~~  129 (273)
T 2ggs_A           60 VIINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG--NYKEEDIP----NPINY  129 (273)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC--SBCTTSCC----CCSSH
T ss_pred             EEEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC--CcCCCCCC----CCCCH
Confidence            999999974321    235678899999999999999999886568999999887654331  22222211    14568


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCY  252 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~  252 (384)
                      |+.||++.+.+++.         +....++|+.+.
T Consensus       130 Y~~sK~~~e~~~~~---------~~~~~iR~~~v~  155 (273)
T 2ggs_A          130 YGLSKLLGETFALQ---------DDSLIIRTSGIF  155 (273)
T ss_dssp             HHHHHHHHHHHHCC---------TTCEEEEECCCB
T ss_pred             HHHHHHHHHHHHhC---------CCeEEEeccccc
Confidence            99999999998876         234566777665

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.71  E-value=4.6e-17  Score=150.24  Aligned_cols=159  Identities=13%  Similarity=0.075  Sum_probs=123.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++||||+|+||++++++|+ +|++|++++|+..                   .+.+|++|.++++++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999999751                   2578999999998887754     689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+||.....    .+.++++..+++|+.++.++++++.+.-.++|++||...+.+... ..+.+....    .+...
T Consensus        57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~-~~~~E~~~~----~p~~~  127 (299)
T 1n2s_A           57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGD-IPWQETDAT----SPLNV  127 (299)
T ss_dssp             EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTT-CCBCTTSCC----CCSSH
T ss_pred             EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCC-CCCCCCCCC----CCccH
Confidence            999999974321    123456778999999999999999876558999999876544321 122222211    24568


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      |+.||++.+.+++.++.       +++.++||.+.++...
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSC
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcC
Confidence            99999999998877532       7899999999988643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.69  E-value=6.3e-17  Score=150.10  Aligned_cols=174  Identities=14%  Similarity=0.015  Sum_probs=126.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++++++||||+|+||++++++|+++|+      +..             .....+..+++|++|++++.++++..   
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------------~~~~~~~~~~~D~~d~~~~~~~~~~~---   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------------EDWVFVSSKDADLTDTAQTRALFEKV---   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------------CEEEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------------ccccccCceecccCCHHHHHHHHhhc---
Confidence            36788999999999999999999999997      110             00112333478999999998887753   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc-c
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV-Q  210 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~-~  210 (384)
                        ++|++||+||......   .+.++.+..+++|+.++.++++++...- +++|++||...+.. .....+.+..... .
T Consensus        61 --~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~-~~~~~~~E~~~~~~~  134 (319)
T 4b8w_A           61 --QPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD-KTTYPIDETMIHNGP  134 (319)
T ss_dssp             --CCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCS-SCCSSBCGGGGGBSC
T ss_pred             --CCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCC-CCCCCccccccccCC
Confidence              6999999999843111   1234556789999999999999998765 47999999865533 2222233322111 1


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ..+....|+.||.+.+.+++.++.+.   |++++.++|+.+..+...
T Consensus       135 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          135 PHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCC
Confidence            11123369999999999999998875   899999999999988653

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.68  E-value=2.2e-16  Score=156.78  Aligned_cols=183  Identities=13%  Similarity=0.064  Sum_probs=131.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH---HHHHHHHHHH-------hcCCcEEEEEeecCCHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG---QEALEKLKKE-------VQDGQIVLMELNLASFDSIKN  124 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~---~~~~~~l~~~-------~~~~~~~~~~~Dvs~~~~v~~  124 (384)
                      ..++|+||||+|+||++++++|.+.|++|++++|+..+.   +...+.+...       ....++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            357999999999999999999999999999999987632   2222222211       12468999999999977766 


Q ss_pred             HHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcC----cC
Q psy2854         125 FAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTID----FD  200 (384)
Q Consensus       125 ~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~----~~  200 (384)
                             ...++|+||||||...       ..+.++..+++|+.++.++++++.+..+++|++||... .....    -.
T Consensus       228 -------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~  292 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDV  292 (508)
T ss_dssp             -------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCC
T ss_pred             -------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCc
Confidence                   3468999999999743       22355678899999999999999986678999999877 21110    01


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      .+.+..... ...+...|+.||.+.+.+.+.++.    .|++++.++||.+.++....
T Consensus       293 ~~~E~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          293 TFSEADVYK-GQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             EECTTCSCS-SBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSC
T ss_pred             ccccccccc-cccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCC
Confidence            111111111 011456899999999999988654    49999999999998876543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.68  E-value=1.7e-17  Score=154.41  Aligned_cols=176  Identities=15%  Similarity=-0.014  Sum_probs=121.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++.+++++||||+|+||++++++|+++|++|++++|+........+.+.......++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            35678999999999999999999999999999999976411000011111011123444555654               


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                        ++|++||+||.......    .+..+..++ |+.++.++++++...- +++|++||...+.... ...+.+....   
T Consensus        69 --~~d~vi~~a~~~~~~~~----~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~-~~~~~E~~~~---  137 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRS----FKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQAD-TLPTPEDSPL---  137 (321)
T ss_dssp             --TEEEEEECCCCCCHHHH----TTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS-SSSBCTTSCC---
T ss_pred             --cCCEEEECCccCChHHH----HhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCC-CCCCCCCCCC---
Confidence              79999999998543211    122233556 9999999999998776 5899999987654432 2222332222   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCcccc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGV-DVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI-~v~~v~PG~v~T~~~~~  258 (384)
                       .+...|+.||.+.+.+++.++.+   .|+ +++.++|+.+.++....
T Consensus       138 -~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~  181 (321)
T 3vps_A          138 -SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERP  181 (321)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCT
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCC
Confidence             15578999999999999998876   489 99999999999886543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.64  E-value=1.2e-15  Score=139.90  Aligned_cols=144  Identities=11%  Similarity=0.083  Sum_probs=114.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      |+++||||+|+||++++++|+++  |++|++++|+.++.++.    ..    .++.++.+|++|+++++++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l----~~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----AD----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH----HH----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH----hh----cCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  99999999987654432    11    357789999999988877654       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      ++|++||+||.. .      . +      ++|+.++.++++++...- +++|++||.....                   
T Consensus        66 ~~d~vi~~a~~~-~------~-~------~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------------  112 (287)
T 2jl1_A           66 GVSKLLFISGPH-Y------D-N------TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------------  112 (287)
T ss_dssp             TCSEEEECCCCC-S------C-H------HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------------
T ss_pred             cCCEEEEcCCCC-c------C-c------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------------
Confidence            589999999962 1      1 1      578999999999987754 4899999876531                   


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ....|+.+|.+.+.+.+.       .|++++.++||.+.++.
T Consensus       113 ~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          113 SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEecccc
Confidence            112699999999988753       58999999999887654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.63  E-value=1.8e-16  Score=145.35  Aligned_cols=161  Identities=14%  Similarity=0.005  Sum_probs=119.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++++++||| +|+||++++++|+++|++|++++|+.++.            ..++.++.+|++|.++++++++      
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------
Confidence            3467899999 59999999999999999999999986541            2467889999999998877654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      +++|++||+||..         .++.+..+++|+.++.++++++...- +++|++||...+.... ...+.+....    
T Consensus        62 ~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~-~~~~~E~~~~----  127 (286)
T 3gpi_A           62 LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEV-EEWLDEDTPP----  127 (286)
T ss_dssp             GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCC-SSEECTTSCC----
T ss_pred             CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCC-CCCCCCCCCC----
Confidence            3699999999862         24456788999999999999987543 4899999987654322 1112222221    


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .+...|+.||.+.+.+ +..        ++++.++||.+..+..
T Consensus       128 ~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~  162 (286)
T 3gpi_A          128 IAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGR  162 (286)
T ss_dssp             CCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTB
T ss_pred             CCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCc
Confidence            1456899999998887 442        8899999999988764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.62  E-value=7.4e-15  Score=138.83  Aligned_cols=151  Identities=15%  Similarity=0.077  Sum_probs=113.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEee-cCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN-LASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-vs~~~~v~~~~~~i~~~  132 (384)
                      +.+++++||||+|+||++++++|+++|++|++++|+.++..  .+++..   ..++.++.+| ++|++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-----
Confidence            34678999999999999999999999999999999876542  122321   2368889999 999998887764     


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCccc-ccCCcCcCCCCcCcCcc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLM-DRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~-~~~~~~~~~~~~~~~~~  209 (384)
                        .+|++|||++...               .+.|..+ .++++++...-  +++|++||... ..+..            
T Consensus        73 --~~d~Vi~~a~~~~---------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~------------  122 (352)
T 1xgk_A           73 --GAHLAFINTTSQA---------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPW------------  122 (352)
T ss_dssp             --TCSEEEECCCSTT---------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSC------------
T ss_pred             --cCCEEEEcCCCCC---------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCC------------
Confidence              5799999997521               1236666 77788777764  58999999762 22111            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                          ....|+.||++.+.+++.       .|+++++++||++.++.
T Consensus       123 ----~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          123 ----PAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             ----CCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred             ----CCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCc
Confidence                334699999999988765       28999999999875544

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.60  E-value=6.1e-15  Score=136.08  Aligned_cols=156  Identities=14%  Similarity=0.026  Sum_probs=113.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +|+++||||+|+||++++++|+++| ++|++++|+.++...  +.+..    ..+.++++|++|+++++++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5799999999999999999999999 999999998765432  22222    357889999999998887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      ++|++|||||.....            ..+.|+.+...+++++...- +++|++||. +..+...        +     .
T Consensus        72 ~~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~~--------~-----~  125 (299)
T 2wm3_A           72 GAYATFIVTNYWESC------------SQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKLTA--------G-----R  125 (299)
T ss_dssp             TCSEEEECCCHHHHT------------CHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CHHHHTT--------T-----S
T ss_pred             cCCEEEEeCCCCccc------------cchHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccccCC--------C-----c
Confidence            589999999852110            12356667777777776553 477875543 3222110        0     0


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ....|+.+|.+++.+.+.       .|++++.++||.+.+++..
T Consensus       126 ~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          126 LAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred             ccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence            234699999999988764       3899999999999887643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.59  E-value=2.6e-14  Score=134.67  Aligned_cols=160  Identities=13%  Similarity=0.121  Sum_probs=114.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +|+.++++||||+|+||++++++|+++|++|++++|+.....+..+.+... ...++.++++|++|.+++.+++++.   
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL-EDKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH-HhCCcEEEEeecCCHHHHHHHHhhC---
Confidence            356789999999999999999999999999999999873222222222221 1357889999999999998887653   


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-C-cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-Q-KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                        ++|++||+||..                   |+.++.++++++...- . ++| .| ..+..       .....    
T Consensus        83 --~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~~g~v~~~v-~S-~~g~~-------~~e~~----  128 (346)
T 3i6i_A           83 --EIDIVVSTVGGE-------------------SILDQIALVKAMKAVGTIKRFL-PS-EFGHD-------VNRAD----  128 (346)
T ss_dssp             --TCCEEEECCCGG-------------------GGGGHHHHHHHHHHHCCCSEEE-CS-CCSSC-------TTTCC----
T ss_pred             --CCCEEEECCchh-------------------hHHHHHHHHHHHHHcCCceEEe-ec-ccCCC-------CCccC----
Confidence              699999999871                   7788888999888765 3 444 33 22211       11111    


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      +..+...|+.+|.+++.+.+.       .|++++.++||.+...+..
T Consensus       129 ~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~  168 (346)
T 3i6i_A          129 PVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYY  168 (346)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCS
T ss_pred             cCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCc
Confidence            112567899999998877654       4899999999998876543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.58  E-value=6.4e-15  Score=134.78  Aligned_cols=141  Identities=16%  Similarity=0.154  Sum_probs=106.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKL--KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++||||+|+||++++++|+++  |++|++++|+.++.++.    ..    .++.++.+|++|+++++++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~----~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL----AA----QGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH----HH----TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh----hc----CCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3799999999999999999999  99999999987654432    11    357788999999988877654       5


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      +|++||+||.. .               ..|+.++.++++++...- +++|++||.... .                  .
T Consensus        66 ~d~vi~~a~~~-~---------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~------------------~  110 (286)
T 2zcu_A           66 VEKLLLISSSE-V---------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-T------------------S  110 (286)
T ss_dssp             CSEEEECC------------------------CHHHHHHHHHHHHTCCEEEEEEETTTT-T------------------C
T ss_pred             CCEEEEeCCCC-c---------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-C------------------C
Confidence            89999999952 1               136778888888887654 489999987654 1                  1


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ...|+.+|.+.+.+.+.       .|++++.++||++.+++
T Consensus       111 ~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          111 PLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             CSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHH
T ss_pred             cchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhh
Confidence            13699999999988753       38999999999877654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.56  E-value=6.4e-14  Score=129.52  Aligned_cols=150  Identities=13%  Similarity=0.144  Sum_probs=105.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-------hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-------IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+. .+++.    ...+.++++|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~----~~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQ----SLGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHH----HTTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHH----hCCCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999986       33322 22332    2357889999999998887765 


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCc
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                            ++|++|||||...                   +.+...+++++...-  +++|  .|..+..  .     ....
T Consensus        76 ------~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~g~v~~~v--~S~~g~~--~-----~~~~  121 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-------------------IEDQVKIIKAIKEAGNVKKFF--PSEFGLD--V-----DRHD  121 (307)
T ss_dssp             ------TCSEEEECSSSSC-------------------GGGHHHHHHHHHHHCCCSEEE--CSCCSSC--T-----TSCC
T ss_pred             ------CCCEEEECCcccc-------------------cccHHHHHHHHHhcCCceEEe--ecccccC--c-----cccc
Confidence                  5899999999732                   234456677776653  4555  3433211  1     0000


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .   ..+....| .+|++++.+.+.       .|++++.++||++.+++.
T Consensus       122 ~---~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A          122 A---VEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             C---CTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTG
T ss_pred             C---CCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeecccc
Confidence            0   01135679 999998887653       379999999999988654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.56  E-value=3.6e-14  Score=134.35  Aligned_cols=171  Identities=13%  Similarity=-0.007  Sum_probs=118.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLK-----ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G-----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++++||||+|+||++++++|+++|     ++|++++|+.....         ....++.++.+|++|.++++++++.  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~--   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSP--   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhc--
Confidence            4689999999999999999999999     99999999865432         1134688899999999988776643  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh---cCcEE-------EEcCcccccCCc-Cc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER---IQKVV-------IVGSSLMDRGTI-DF  199 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~---l~~iv-------~vsS~~~~~~~~-~~  199 (384)
                        .+++|++||+||...         ++.+..+++|+.++.++++++.+.   .+++|       ++||...+.... ..
T Consensus        70 --~~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~  138 (364)
T 2v6g_A           70 --LTDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHD  138 (364)
T ss_dssp             --CTTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred             --CCCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCC
Confidence              234999999999742         245678899999999999999886   44666       577765443221 11


Q ss_pred             CCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCC-cEEEEEecCcccCCcccc
Q psy2854         200 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKG-VDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~g-I~v~~v~PG~v~T~~~~~  258 (384)
                      ..+.+.....   +....|.    +.+.+.+.++.   ..| ++++.++|+.+..+....
T Consensus       139 ~~~~E~~~~~---~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~  188 (364)
T 2v6g_A          139 PPYTEDLPRL---KYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYS  188 (364)
T ss_dssp             SSBCTTSCCC---SSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTC
T ss_pred             CCCCccccCC---ccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCc
Confidence            1222221111   0123462    23444444332   245 999999999999876543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.54  E-value=3.8e-14  Score=134.79  Aligned_cols=136  Identities=18%  Similarity=0.142  Sum_probs=111.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      +++||||+|+||++++++|+++|+ +|+..+|+                           +|+++++++++       ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 77776654                           67777777765       48


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      |++||+||....        ++.+..+++|+.++.++++++...-.  ++|++||.....                    
T Consensus        48 d~Vih~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------------   99 (369)
T 3st7_A           48 DFIVHLAGVNRP--------EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------   99 (369)
T ss_dssp             SEEEECCCSBCT--------TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------------
T ss_pred             CEEEECCcCCCC--------CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------------
Confidence            999999997542        23455788999999999999877642  699999876542                    


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ...|+.||++.+.+.+.++++.   |++++.++|+.+..+..+.
T Consensus       100 ~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~  140 (369)
T 3st7_A          100 DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKP  140 (369)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCT
T ss_pred             CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCC
Confidence            3479999999999999998875   7999999999998876543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.52  E-value=5.2e-14  Score=139.81  Aligned_cols=163  Identities=13%  Similarity=-0.007  Sum_probs=115.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.                ..+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCC
Confidence            57999999999999999999999999999999986532                12567876431         223458


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++....  +++|++||...+........+.+....     
T Consensus       202 ~D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-----  273 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-----  273 (516)
T ss_dssp             CSEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-----
T ss_pred             CCEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-----
Confidence            99999999985433   23567778899999999999999854433  479999997765412111112222211     


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +...|+.+|...+.+.+.    ....|++++.++||.+.++.
T Consensus       274 ~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          274 GDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             CSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTT
T ss_pred             CcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCC
Confidence            345688888877765443    23459999999999998875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.52  E-value=6e-14  Score=128.68  Aligned_cols=144  Identities=13%  Similarity=0.138  Sum_probs=103.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      +++||||+|+||++++++|++. |++|++++|+.++..+.        ...++.++++|++|+++++++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~--------~~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD--------WRGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG--------GBTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh--------hhCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998 99999999997654321        13578899999999998887654       68


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      |++|||||....       .       ..|+.++..+++++...- +++|++||.......                   
T Consensus        67 d~vi~~a~~~~~-------~-------~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~-------------------  113 (289)
T 3e48_A           67 DTVVFIPSIIHP-------S-------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN-------------------  113 (289)
T ss_dssp             SEEEECCCCCCS-------H-------HHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC-------------------
T ss_pred             CEEEEeCCCCcc-------c-------hhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC-------------------
Confidence            999999997421       1       236777778888877654 479999985422111                   


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                       .|..++...  .   ....+...|++++.++||.+.+++
T Consensus       114 -~~~~~~~~~--~---~e~~~~~~g~~~~ilrp~~~~~~~  147 (289)
T 3e48_A          114 -PFHMSPYFG--Y---ASRLLSTSGIDYTYVRMAMYMDPL  147 (289)
T ss_dssp             -CSTTHHHHH--H---HHHHHHHHCCEEEEEEECEESTTH
T ss_pred             -CCccchhHH--H---HHHHHHHcCCCEEEEecccccccc
Confidence             122222211  1   122233458999999999998874

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.49  E-value=1.7e-13  Score=127.03  Aligned_cols=158  Identities=13%  Similarity=0.065  Sum_probs=107.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .++++||||+|+||++++++|+++|++|++++|+.... .+..+.+... ...++.++++|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHHh-------
Confidence            46799999999999999999999999999999985321 1111222111 13468889999999998887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ++|++||+||.....               .|+.++..+++++...-  +++|+  |..+....    ..  ...   ..
T Consensus        76 ~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~~~g~v~~~v~--S~~g~~~~----~~--~~~---~~  129 (313)
T 1qyd_A           76 QVDVVISALAGGVLS---------------HHILEQLKLVEAIKEAGNIKRFLP--SEFGMDPD----IM--EHA---LQ  129 (313)
T ss_dssp             TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHHHSCCCSEEEC--SCCSSCTT----SC--CCC---CS
T ss_pred             CCCEEEECCccccch---------------hhHHHHHHHHHHHHhcCCCceEEe--cCCcCCcc----cc--ccC---CC
Confidence            589999999974321               26677788888887753  46653  33221110    00  000   01


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      +....| .+|.+++.+.+.       .|++++.++||++.+++
T Consensus       130 p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~  164 (313)
T 1qyd_A          130 PGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYF  164 (313)
T ss_dssp             STTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHH
T ss_pred             CCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceecccc
Confidence            135678 999998877642       48999999999886543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.49  E-value=6.1e-13  Score=121.68  Aligned_cols=151  Identities=7%  Similarity=-0.090  Sum_probs=108.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++++|||| |+||++++++|+++|++|++++|+.++.....    .    ..+.++.+|++|.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A----SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H----TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h----CCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999999999999976654322    1    36889999999833            4579


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHH---hcCcEEEEcCcccccCCcCcCCCCcCcCcccCCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIE---RIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGH  213 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~---~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  213 (384)
                      |++||+||.....       +..          ...+.+++..   ..+++|++||...+.... ...+.+....    .
T Consensus        65 d~vi~~a~~~~~~-------~~~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~-~~~~~E~~~~----~  122 (286)
T 3ius_A           65 THLLISTAPDSGG-------DPV----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHD-GAWVDETTPL----T  122 (286)
T ss_dssp             CEEEECCCCBTTB-------CHH----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCT-TCEECTTSCC----C
T ss_pred             CEEEECCCccccc-------cHH----------HHHHHHHHHhhcCCceEEEEeecceecCCCC-CCCcCCCCCC----C
Confidence            9999999974321       110          1234444443   335899999986554322 1112222221    1


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      +...|+.||.+.+.+.+.+      .|+++++++||.+..+..
T Consensus       123 p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A          123 PTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             CCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTB
T ss_pred             CCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCc
Confidence            4568999999999888776      589999999999988753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.47  E-value=5.1e-13  Score=124.31  Aligned_cols=149  Identities=10%  Similarity=0.079  Sum_probs=102.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-h----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-I----RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ...+..+++.    ...+.++++|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc---
Confidence            35799999999999999999999999999999986 2    1122222222    2458889999999998887765   


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                          ++|++||+||...                   +.+...+++++...-  +++|  .|..+..  .     ......
T Consensus        77 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~g~v~~~v--~S~~g~~--~-----~~~~~~  124 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-------------------ISSQIHIINAIKAAGNIKRFL--PSDFGCE--E-----DRIKPL  124 (321)
T ss_dssp             ----TCSEEEECCCGGG-------------------SGGGHHHHHHHHHHCCCCEEE--CSCCSSC--G-----GGCCCC
T ss_pred             ----CCCEEEECCCccc-------------------hhhHHHHHHHHHHhCCccEEe--ccccccC--c-----cccccC
Confidence                5899999998631                   334456667776653  4665  3433211  0     000000


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                         .+....| .+|++++.+.+.       .|++++.++||.+.++
T Consensus       125 ---~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          125 ---PPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAY  159 (321)
T ss_dssp             ---HHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHH
T ss_pred             ---CCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccc
Confidence               0024579 999999887753       2788899999987653

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.46  E-value=5.2e-13  Score=123.40  Aligned_cols=153  Identities=14%  Similarity=0.124  Sum_probs=103.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG--QEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .++++||||+|+||++++++|+++|++|++++|+....  .+..+.+... ....+.++++|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999985432  2222222221 13468889999999998887765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                       ++|++||+||...                   +.+...+++++...-  +++| . |..+..  .     .....   .
T Consensus        77 -~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~~g~v~~~v-~-S~~g~~--~-----~~~~~---~  124 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ-------------------IESQVNIIKAIKEVGTVKRFF-P-SEFGND--V-----DNVHA---V  124 (308)
T ss_dssp             -TCSEEEECCCGGG-------------------SGGGHHHHHHHHHHCCCSEEE-C-SCCSSC--T-----TSCCC---C
T ss_pred             -CCCEEEECCcchh-------------------hhhHHHHHHHHHhcCCCceEe-e-cccccC--c-----ccccc---C
Confidence             5899999998631                   233455667776653  4565 3 332211  1     00000   0


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .+....| .+|++++.+.+.       .|++++.++||++.+++
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          125 EPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHH
T ss_pred             CcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceecccc
Confidence            1134678 999998887653       37889999999886643

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.43  E-value=9.8e-13  Score=122.29  Aligned_cols=147  Identities=14%  Similarity=0.111  Sum_probs=101.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+..+++..    ..+.++++|++|++++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            5799999999999999999999999999999987522222333322    357889999999998887764       58


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--CcEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      |++||+||...                   +.+...+++++...-  +++| . |..+..  .     ......   .+.
T Consensus        81 d~vi~~a~~~~-------------------~~~~~~l~~aa~~~g~v~~~v-~-S~~g~~--~-----~~~~~~---~p~  129 (318)
T 2r6j_A           81 DVVISALAFPQ-------------------ILDQFKILEAIKVAGNIKRFL-P-SDFGVE--E-----DRINAL---PPF  129 (318)
T ss_dssp             SEEEECCCGGG-------------------STTHHHHHHHHHHHCCCCEEE-C-SCCSSC--T-----TTCCCC---HHH
T ss_pred             CEEEECCchhh-------------------hHHHHHHHHHHHhcCCCCEEE-e-eccccC--c-----ccccCC---CCc
Confidence            99999998631                   234456667766653  4555 2 332211  0     000000   002


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                      ...| .+|.+++.+.+.       .|++++.++||.+..
T Consensus       130 ~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A          130 EALI-ERKRMIRRAIEE-------ANIPYTYVSANCFAS  160 (318)
T ss_dssp             HHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHH
T ss_pred             chhH-HHHHHHHHHHHh-------cCCCeEEEEcceehh
Confidence            4578 999998877653       478999999997754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.41  E-value=9.2e-14  Score=127.53  Aligned_cols=109  Identities=18%  Similarity=0.230  Sum_probs=85.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||+||||++++++|+++|++|++++|+.++.++..+++....   ++.++.+|++|+++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH-----
Confidence            4789999999999999999999999999999999999888887777765431   35667899999988776654     


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCCh-hhHHHHhchhhhHHH
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTK-EGYEVHFGINHVGHF  171 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~-~~~~~~~~vN~~~~~  171 (384)
                        .+|+||||||.... .+..+.+. ++++..+++|+.+++
T Consensus       188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence              47999999987432 22222233 666778899988765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.22  E-value=1.2e-10  Score=107.09  Aligned_cols=160  Identities=14%  Similarity=0.036  Sum_probs=104.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .|+||||||.||++++++|.++|++|+++.|++..              ..+   ..|     ..      ..+...++|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TWD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EHH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ecc-----hh------hHhhccCCC
Confidence            58999999999999999999999999999997532              111   112     11      113356899


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      .+||.||.....+....+.+..+..++.|+.++..+.+.+...-.   .+|+.||...+ +...-....++....    +
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vy-g~~~~~~~~E~~p~~----~  128 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYY-QPSLTAEYDEDSPGG----D  128 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGS-CCCSSCCBCTTCCCS----C
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeee-cCCCCCcccccCCcc----c
Confidence            999999864333333346677778899999999988887765433   24555555443 332222222222211    3


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      ...|+.+|...+.     .......++++..++||.+..+-
T Consensus       129 ~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          129 FDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRG  164 (298)
T ss_dssp             SSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTT
T ss_pred             cchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCC
Confidence            3445555544332     22345678999999999998774

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.15  E-value=1.7e-11  Score=106.91  Aligned_cols=84  Identities=14%  Similarity=0.127  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          52 KPMEGKVCIITGA----------------NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        52 ~~~~~k~vlITGa----------------s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .+++||+|+||||                |||||+++|++|+++|++|++++++.. ++         . ...+  -.+|
T Consensus         4 ~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~-~~g~--~~~d   70 (226)
T 1u7z_A            4 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------T-PPFV--KRVD   70 (226)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------C-CTTE--EEEE
T ss_pred             cCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------c-CCCC--eEEc
Confidence            3689999999999                689999999999999999999888642 11         0 1122  2568


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCCCCCCCCC
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE  151 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~  151 (384)
                      +++.+   ++.+.+.+.++++|++|||||+....+.
T Consensus        71 v~~~~---~~~~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           71 VMTAL---EMEAAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             CCSHH---HHHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             cCcHH---HHHHHHHHhcCCCCEEEECCcccCCCCc
Confidence            87754   4566777788999999999998654443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.09  E-value=2.7e-10  Score=106.32  Aligned_cols=168  Identities=17%  Similarity=0.079  Sum_probs=107.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-------TVVLGCRSM--IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      ..++||||+|.||.+++..|+++|.       +|++.+++.  ++.+....++..    ..+.++ .|+.+.++..+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~----~~~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED----CAFPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT----TTCTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc----cccccc-CCeEeccChHHHh-
Confidence            4699999999999999999999996       799998864  223332333322    111122 5666544444332 


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--C-cEEEEcCcccccCCcCcCCCCc
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--Q-KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~-~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                            .+.|++||.||.... +  .   +..+..+++|+.++..+++.+...-  . +++++|+..........    .
T Consensus        79 ------~~~D~Vih~Ag~~~~-~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~----~  142 (327)
T 1y7t_A           79 ------KDADYALLVGAAPRK-A--G---MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAY----K  142 (327)
T ss_dssp             ------TTCSEEEECCCCCCC-T--T---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH----H
T ss_pred             ------CCCCEEEECCCcCCC-C--C---CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHH----H
Confidence                  368999999998532 1  1   2234578999999999999998874  3 56666665421111000    0


Q ss_pred             Cc-CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         205 EK-GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       205 ~~-~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                      .. ++    ++...|+.||...+.+...++..+   |+++..++|..|..
T Consensus       143 ~~~~~----~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          143 NAPGL----NPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG  185 (327)
T ss_dssp             TCTTS----CGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred             HcCCC----ChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence            00 11    144569999999999988888776   55555555554433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.95  E-value=2.3e-10  Score=99.98  Aligned_cols=93  Identities=15%  Similarity=0.132  Sum_probs=65.7

Q ss_pred             CCCEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC
Q psy2854          55 EGKVCIITGA----------------NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS  118 (384)
Q Consensus        55 ~~k~vlITGa----------------s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~  118 (384)
                      +||+|+||||                ||++|.++|++|+++|++|++++|+.....        .. ...+     |+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~-~~~~-----~~~~   67 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EP-HPNL-----SIRE   67 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CC-CTTE-----EEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cC-CCCe-----EEEE
Confidence            5899999999                777999999999999999999999743100        00 1122     3333


Q ss_pred             HHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHH
Q psy2854         119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEV  161 (384)
Q Consensus       119 ~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~  161 (384)
                      .+++++..+.+.+.++++|++|||||+....+....+.+.+..
T Consensus        68 v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~~  110 (232)
T 2gk4_A           68 ITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQA  110 (232)
T ss_dssp             CCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHHHH
T ss_pred             HhHHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhhhc
Confidence            3456667777777888999999999997655554334444443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.80  E-value=4.3e-09  Score=87.25  Aligned_cols=77  Identities=10%  Similarity=0.069  Sum_probs=62.5

Q ss_pred             CchhHHHHHHHHHCCCEEEEEecCchhHH---HHHHHHHHHhcCCcEEEEEeecCCH--HHHHHHHHHHHHhCCCccEEE
Q psy2854          66 SGIGYETAKELAKLKATVVLGCRSMIRGQ---EALEKLKKEVQDGQIVLMELNLASF--DSIKNFAKNVMKQYPKIHVLI  140 (384)
Q Consensus        66 ~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dvs~~--~~v~~~~~~i~~~~g~id~lv  140 (384)
                      +-++.++++.|++.|++|++..|+.+...   +..+.+.+.  +.+...+++|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45889999999999999999988754332   123333332  56788889999999  9999999999999999 9999


Q ss_pred             ECCCC
Q psy2854         141 NNAGV  145 (384)
Q Consensus       141 nnAG~  145 (384)
                      ||||+
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99997

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.79  E-value=2.4e-08  Score=77.93  Aligned_cols=75  Identities=12%  Similarity=0.019  Sum_probs=60.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|++++.+...        ...+..+.+|+++.+++++++       
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~-------   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKAL-------   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHT-------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHH-------
Confidence            3578999999 999999999999999 89999999876554432        235667889999988777654       


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      .++|++|+++|.
T Consensus        68 ~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 GGFDAVISAAPF   79 (118)
T ss_dssp             TTCSEEEECSCG
T ss_pred             cCCCEEEECCCc
Confidence            378999999964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.70  E-value=7.5e-08  Score=92.29  Aligned_cols=82  Identities=22%  Similarity=0.338  Sum_probs=69.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++++|+|| ||||+++++.|+++|   .+|++++|+.+++++..+++.... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            47889999 899999999999998   489999999988888777765431 246888999999999999998875    


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                       ++|+||||||.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.69  E-value=8.3e-09  Score=102.20  Aligned_cols=99  Identities=22%  Similarity=0.318  Sum_probs=65.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++|||| ||+|++++++|++.|++|++++|+.++.++..+++     +.++.    ++.|.   +++      .
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~dl---~~~------~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTDL---DNY------H  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTTT---TTC-------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHHh---hhc------c
Confidence            467899999999 59999999999999999999999987766655443     12221    23221   100      1


Q ss_pred             CCCccEEEECCCCCCC-----CCCCCCChhhHHHHhchhhhHH
Q psy2854         133 YPKIHVLINNAGVSVP-----IKEKLTTKEGYEVHFGINHVGH  170 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-----~~~~~~~~~~~~~~~~vN~~~~  170 (384)
                      .+.+|+||||+|+...     .++.+.+.+.++.++++|+.+.
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            1358999999998542     2455556778888999998764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.68  E-value=7e-11  Score=113.92  Aligned_cols=44  Identities=25%  Similarity=0.321  Sum_probs=39.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL   97 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   97 (384)
                      .+.||+|+|||++ |||+++|+.|++.|++|+++++++.+..+..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5789999999987 9999999999999999999999876655544

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=2e-08  Score=91.77  Aligned_cols=82  Identities=17%  Similarity=0.301  Sum_probs=61.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++.++..+++....... . .+.+|+++.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HHh
Confidence            4678999999997 99999999999999 99999999888877777665431101 0 123566552          345


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                      ++++|+||||+|....
T Consensus       191 ~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          191 LDGVDIIINATPIGMY  206 (287)
T ss_dssp             CTTCCEEEECSCTTCT
T ss_pred             hCCCCEEEECCCCCCC
Confidence            6789999999998553

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.61  E-value=5e-08  Score=91.05  Aligned_cols=79  Identities=14%  Similarity=0.158  Sum_probs=59.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+.+.|++|++++|+.++.+.. +++     +..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            578999999999999999999999999999999987665443 222     222   34688874455555554432  5


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|||+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            8999999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.58  E-value=1.1e-07  Score=81.80  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|++++.+..    ++ . +..   ..+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-~-g~~---~~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-L-GVE---YVGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-T-CCS---EEEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC---EEeeCCcHHHHHHHHHHhC--CC
Confidence            578999999999999999999999999999999986654332    22 1 222   2358877654444433221  13


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|||+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.57  E-value=9.5e-08  Score=92.67  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |++|+++||| +||+|+++++.|++.|++|++++|+.++.++..+    ..  ..+..+++|++|.++++++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~--~~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GV--QHSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TC--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hc--CCceEEEeecCCHHHHHHHHc------
Confidence            3578999998 7999999999999999999999998765443322    11  246778899999988876653      


Q ss_pred             CCccEEEECCCCC
Q psy2854         134 PKIHVLINNAGVS  146 (384)
Q Consensus       134 g~id~lvnnAG~~  146 (384)
                       ++|++|||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             699999999874

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.47  E-value=1.7e-06  Score=79.48  Aligned_cols=84  Identities=17%  Similarity=0.249  Sum_probs=64.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS---MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.++..+++.... +  ......++.+.+++.+.+. 
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~--~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-D--CKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHHHH-
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-C--CceEEeccchHHHHHhhhc-
Confidence            578999999998 7999999999999999 89999999   788888777776653 1  2334457777665554332 


Q ss_pred             HHHhCCCccEEEECCCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSV  147 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~  147 (384)
                            ..|++||+.....
T Consensus       226 ------~aDiIINaTp~Gm  238 (315)
T 3tnl_A          226 ------ESVIFTNATGVGM  238 (315)
T ss_dssp             ------TCSEEEECSSTTS
T ss_pred             ------CCCEEEECccCCC
Confidence                  5799999987643

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=3.2e-07  Score=83.02  Aligned_cols=78  Identities=21%  Similarity=0.314  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++.++..+++...   ..+     |+.+.+++       . +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~---~~~-----~~~~~~~~-------~-~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT---GSI-----QALSMDEL-------E-G  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG---SSE-----EECCSGGG-------T-T
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc---CCe-----eEecHHHh-------c-c
Confidence            467899999998 79999999999999999999999988777666554321   122     22332221       1 1


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                       ++.|++|||+|....
T Consensus       179 -~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          179 -HEFDLIINATSSGIS  193 (271)
T ss_dssp             -CCCSEEEECCSCGGG
T ss_pred             -CCCCEEEECCCCCCC
Confidence             689999999997543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.39  E-value=2.5e-06  Score=80.65  Aligned_cols=78  Identities=21%  Similarity=0.134  Sum_probs=60.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++++++|+|+ |+||+++++.+...|++|++++|+.++.+...+.    . +..   +.+|.++.++++++++     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----~-g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----F-GGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----T-TTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c-Cce---EEEecCCHHHHHHHHh-----
Confidence            578899999999 9999999999999999999999997665544322    2 222   4678888887776653     


Q ss_pred             CCCccEEEECCCCC
Q psy2854         133 YPKIHVLINNAGVS  146 (384)
Q Consensus       133 ~g~id~lvnnAG~~  146 (384)
                        +.|++|+++|..
T Consensus       229 --~~DvVi~~~g~~  240 (369)
T 2eez_A          229 --HADLLIGAVLVP  240 (369)
T ss_dssp             --HCSEEEECCC--
T ss_pred             --CCCEEEECCCCC
Confidence              579999999973

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.38  E-value=9.1e-07  Score=82.96  Aligned_cols=80  Identities=15%  Similarity=0.122  Sum_probs=60.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|+.++.+.. ++    . +..   ..+|.++.+++.+.++++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~----~-g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS----I-GGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH----T-TCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH----c-CCc---eEEecCccHhHHHHHHHHhCC--
Confidence            478999999999999999999999999999999987765432 22    1 222   235888666666666665433  


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.34  E-value=1.5e-05  Score=71.00  Aligned_cols=46  Identities=22%  Similarity=0.255  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||.++.++||+||+|+||+++|++.+..
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~  198 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS  198 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc
Confidence            4457999999999999999999999999999999999999997654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.33  E-value=7e-07  Score=82.98  Aligned_cols=79  Identities=16%  Similarity=0.203  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|++++.+...+ +     +..   ..+|.++.+..+++.+...  .+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHhC--CC
Confidence            47899999999999999999999999999999998766544322 2     222   2357777654444433221  13


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1.2e-06  Score=85.05  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++++++++|+|| ||+|+++++.|++. |++|++++|+.++.++..++       ..+..+.+|++|.+++.++++   
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc---
Confidence            3577899999997 99999999999998 78999999997665544322       135567899999888776654   


Q ss_pred             HhCCCccEEEECCCCC
Q psy2854         131 KQYPKIHVLINNAGVS  146 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~  146 (384)
                          ++|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                689999999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.32  E-value=9.9e-07  Score=82.18  Aligned_cols=80  Identities=20%  Similarity=0.191  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|+.++.+... ++     +..   ..+|.++.+..+++.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCH---HTINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCCHHHHHHHHHHhC--CC
Confidence            4789999999999999999999999999999999876654432 22     222   2357776654444433321  23


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.32  E-value=7.7e-07  Score=83.34  Aligned_cols=81  Identities=15%  Similarity=0.131  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.++++.+...|++|++++|+.++.+...+    +. +..   ..+|.++.+++.+.++++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~~-g~~---~~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT----KF-GFD---DAFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TS-CCS---EEEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----Hc-CCc---eEEecCCHHHHHHHHHHHhC--C
Confidence            57899999999999999999999999999999998765544322    22 222   23477765445554544432  5


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       225 ~~d~vi~~~g~  235 (345)
T 2j3h_A          225 GIDIYFENVGG  235 (345)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCH
Confidence            79999999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.29  E-value=1.2e-06  Score=82.41  Aligned_cols=80  Identities=20%  Similarity=0.168  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.. +++     +..   ..+|.++.+..+++.+...  .+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHhc--CC
Confidence            478999999999999999999999999999999987665543 222     222   2357776554443332211  13


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.27  E-value=1.2e-06  Score=81.68  Aligned_cols=80  Identities=18%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.++++.+...|++|++++|++++.+...+++     +..   ...|.++.+..+.+.+ ..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~~~-~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAGLKR-EC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHHHHH-HC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHHHHH-hc--CC
Confidence            5889999999999999999999999999999999876655442322     221   2357766543333332 21  24


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.25  E-value=9.1e-07  Score=83.28  Aligned_cols=77  Identities=16%  Similarity=0.164  Sum_probs=54.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ++++||||+||||.++++.+...|+ +|++++++.++.+...++    . +..   ..+|.++.+..+. +.+...  ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~----~-g~~---~~~d~~~~~~~~~-~~~~~~--~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE----L-GFD---AAINYKKDNVAEQ-LRESCP--AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----S-CCS---EEEETTTSCHHHH-HHHHCT--TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----c-CCc---eEEecCchHHHHH-HHHhcC--CC
Confidence            8999999999999999999999999 999999986655443321    2 222   2467776443332 222211  27


Q ss_pred             ccEEEECCC
Q psy2854         136 IHVLINNAG  144 (384)
Q Consensus       136 id~lvnnAG  144 (384)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.24  E-value=1.7e-06  Score=81.24  Aligned_cols=80  Identities=14%  Similarity=0.174  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.. ++    . +..   ..+|.++.+..+++.+..  ..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~----~-ga~---~~~d~~~~~~~~~~~~~~--~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ----N-GAH---EVFNHREVNYIDKIKKYV--GEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----T-TCS---EEEETTSTTHHHHHHHHH--CTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH----c-CCC---EEEeCCCchHHHHHHHHc--CCC
Confidence            478999999999999999999999999999999987665522 22    2 222   235777655444433322  123


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       239 ~~D~vi~~~G~  249 (351)
T 1yb5_A          239 GIDIIIEMLAN  249 (351)
T ss_dssp             CEEEEEESCHH
T ss_pred             CcEEEEECCCh
Confidence            79999999983

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.22  E-value=5.5e-06  Score=75.11  Aligned_cols=82  Identities=15%  Similarity=0.208  Sum_probs=61.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++....+..++.  ..+..+   +.+.++    
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh----
Confidence            578999999998 7999999999999999 69999999999888888887654333332  334333   333222    


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                         ..|++||+....+
T Consensus       194 ---~~DiVInaTp~Gm  206 (283)
T 3jyo_A          194 ---AADGVVNATPMGM  206 (283)
T ss_dssp             ---HSSEEEECSSTTS
T ss_pred             ---cCCEEEECCCCCC
Confidence               4699999987644

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.20  E-value=5.6e-06  Score=66.76  Aligned_cols=75  Identities=9%  Similarity=0.043  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++++++|+|+ |.+|+++++.|.++|++|+++++++++.+...    +    ....++..|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~----~~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----D----EGFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H----TTCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----H----CCCcEEECCCCCHHHHHhC------Ccc
Confidence            3568999998 77999999999999999999999876544432    2    1356788999999876653      234


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899998776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.20  E-value=1.6e-06  Score=69.98  Aligned_cols=78  Identities=13%  Similarity=0.094  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++|++++.+.    +.+    .....+.+|.++.+.++++      .
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~----~~~~~~~~d~~~~~~l~~~------~   67 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YAS----YATHAVIANATEENELLSL------G   67 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTT----TCSEEEECCTTCHHHHHTT------T
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH----hCCEEEEeCCCCHHHHHhc------C
Confidence            355678999998 999999999999999999999998654332    211    1235577899887655432      1


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .++.|++|++++.
T Consensus        68 ~~~~d~vi~~~~~   80 (144)
T 2hmt_A           68 IRNFEYVIVAIGA   80 (144)
T ss_dssp             GGGCSEEEECCCS
T ss_pred             CCCCCEEEECCCC
Confidence            3468999999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.15  E-value=3.5e-06  Score=78.92  Aligned_cols=80  Identities=14%  Similarity=0.196  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|++++||||+||||.++++.+... |++|+++++++++.+.. +++     +..   ..+|.++.+..+++ .++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~-~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GAD---YVINASMQDPLAEI-RRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCS---EEEETTTSCHHHHH-HHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCC---EEecCCCccHHHHH-HHHhcC-
Confidence            5789999999999999999999999 99999999987665443 222     222   23476665433322 222111 


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            589999999985

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.14  E-value=1.8e-05  Score=72.54  Aligned_cols=84  Identities=19%  Similarity=0.248  Sum_probs=61.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS---MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.++..+++.... +  ......+..+.+...+.++ 
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~--~~v~~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-D--CVVTVTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHHHH-
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-C--cceEEechHhhhhhHhhcc-
Confidence            578999999997 8999999999999999 79999999   777777777776543 2  2233456655433222222 


Q ss_pred             HHHhCCCccEEEECCCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSV  147 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~  147 (384)
                            ..|++||+....+
T Consensus       220 ------~~DiIINaTp~Gm  232 (312)
T 3t4e_A          220 ------SADILTNGTKVGM  232 (312)
T ss_dssp             ------HCSEEEECSSTTS
T ss_pred             ------CceEEEECCcCCC
Confidence                  4699999987654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.11  E-value=7.7e-06  Score=73.16  Aligned_cols=47  Identities=13%  Similarity=-0.076  Sum_probs=43.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.||.+|.++||+||+|+||+++|++.+...
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence            44579999999999999999999999999999999999999988653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.07  E-value=1.1e-05  Score=72.79  Aligned_cols=124  Identities=15%  Similarity=0.122  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHHHHHH-HH-HHhhccccc-cccc-ccccccCCC
Q psy2854         222 KLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIA-MM-VVIVGSSLM-DRGT-IDFDNLNGE  297 (384)
Q Consensus       222 K~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~-~~~s~s~~~-~~~~-i~f~~l~g~  297 (384)
                      ...++.+.+....++.  +|.+..-+-|.....-..+...+.+.+.+-.-+. .+ +.+..-..+ .++. +......+.
T Consensus        87 ~~~v~~~~~~~~~~~G--~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A           87 LAELDRLYEKVKAEAG--RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             HHHHHHHHHHHHHHHS--CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHHHcC--CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            3455666677777775  3666666666544333334444444443321111 11 122222222 2222 333222222


Q ss_pred             ccccccCCCCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         298 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       298 ~~~~~~g~~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      .+.    ....+|+.||.+...+++.||.+|.++||+||+|+||+++|++.+..
T Consensus       165 ~~~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~  214 (273)
T 4fgs_A          165 TGT----PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL  214 (273)
T ss_dssp             SCC----TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC------
T ss_pred             cCC----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh
Confidence            211    34457999999999999999999999999999999999999987654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.07  E-value=8.6e-06  Score=73.56  Aligned_cols=78  Identities=21%  Similarity=0.312  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++...   ..+.  .+|+.   ++.        +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~---~~~~--~~~~~---~~~--------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQ--AVSMD---SIP--------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEE--EEEGG---GCC--------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc---CCeE--EeeHH---Hhc--------c
Confidence            467899999998 79999999999999999999999988877776665321   1222  23431   110        1


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                       +..|++||+++....
T Consensus       179 -~~~DivIn~t~~~~~  193 (272)
T 1p77_A          179 -QTYDLVINATSAGLS  193 (272)
T ss_dssp             -SCCSEEEECCCC---
T ss_pred             -CCCCEEEECCCCCCC
Confidence             479999999998543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.04  E-value=1.2e-05  Score=75.46  Aligned_cols=79  Identities=20%  Similarity=0.245  Sum_probs=57.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.++++.+...|++|+++++++++.+... ++     +..   ...|.++.+..+.+.+ ..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~~~~~~~~~~~~~~-~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAK---RGINYRSEDFAAVIKA-ET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHH-HH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEeCCchHHHHHHHH-Hh--CC
Confidence            5789999999999999999999999999999999977655432 22     222   2246666544443333 22  45


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.01  E-value=1e-05  Score=72.10  Aligned_cols=45  Identities=13%  Similarity=0.216  Sum_probs=41.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~  199 (255)
T 4g81_D          155 TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA  199 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc
Confidence            445799999999999999999999999999999999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.01  E-value=6.7e-06  Score=73.58  Aligned_cols=46  Identities=28%  Similarity=0.403  Sum_probs=40.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||.++.++||+||+|+||+++|++.+..
T Consensus       149 ~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~  194 (258)
T 4gkb_A          149 NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNW  194 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhh
Confidence            4457999999999999999999999999999999999999998754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.98  E-value=2.9e-05  Score=72.09  Aligned_cols=156  Identities=11%  Similarity=0.003  Sum_probs=97.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecC----chhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA-------TVVLGCRS----MIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      ..++||||+|.+|.+++..|+..|.       .|++.+++    .++.+....++....  ...   ..|+...++..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~---~~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPL---LAGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTT---EEEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--ccc---cCcEEEecCcHHH
Confidence            4799999999999999999999885       79999988    555655555554421  111   1244433333332


Q ss_pred             HHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc--C-cEEEEcCcccccCCcCcCCC
Q psy2854         126 AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI--Q-KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l--~-~iv~vsS~~~~~~~~~~~~~  202 (384)
                             +...|++|+.||.... +  ..+.   ...+..|+.....+.+.+..+-  . +++++|.........-..  
T Consensus        81 -------l~~aD~Vi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~--  145 (329)
T 1b8p_A           81 -------FKDADVALLVGARPRG-P--GMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMK--  145 (329)
T ss_dssp             -------TTTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHH--
T ss_pred             -------hCCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHH--
Confidence                   3478999999997432 1  1122   3467899999999999998874  3 577776644221110000  


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA  237 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~  237 (384)
                       ...+++    ....|+.++.--..+...++..+.
T Consensus       146 -~~~~~p----~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          146 -SAPSLP----AKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             -TCTTSC----GGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             -HcCCCC----HHHEEEeecHHHHHHHHHHHHHhC
Confidence             000111    333577777655666677777764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.97  E-value=2.4e-05  Score=73.07  Aligned_cols=79  Identities=16%  Similarity=0.176  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||+|.++++.+...|++|++++|++++.+... ++     +..   ..+|.++.+..++ +.+.. ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~---~~~d~~~~~~~~~-~~~~~-~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GAD---ETVNYTHPDWPKE-VRRLT-GGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTSTTHHHH-HHHHT-TTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEcCCcccHHHH-HHHHh-CCC
Confidence            4789999999999999999999999999999999876655432 22     222   1257776542222 22221 123


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.96  E-value=1.1e-05  Score=75.18  Aligned_cols=80  Identities=14%  Similarity=0.155  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.+.++.+...|++|++++++.++.+.. ++    . +..   ...|.++.+..+.+.+..  ...
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~----~-ga~---~~~~~~~~~~~~~~~~~~--~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE----Y-GAE---YLINASKEDILRQVLKFT--NGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----T-TCS---EEEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----c-CCc---EEEeCCCchHHHHHHHHh--CCC
Confidence            578999999999999999999999999999999987665532 22    2 222   234665544333332211  123


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.92  E-value=2e-05  Score=76.39  Aligned_cols=85  Identities=15%  Similarity=0.248  Sum_probs=58.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEe--ecC---------CHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL--NLA---------SFDSIK  123 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~--Dvs---------~~~~v~  123 (384)
                      .|++|+|+||+||||.+.++.+...|++|++++++.++.+.. +   + . +....+-..  |+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~-l-Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---A-L-GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---H-T-TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---h-c-CCCEEEecccccccccccccccccchhhh
Confidence            588999999999999999999999999999999886665443 2   2 2 222211111  111         123455


Q ss_pred             HHHHHHHHhCC-CccEEEECCCC
Q psy2854         124 NFAKNVMKQYP-KIHVLINNAGV  145 (384)
Q Consensus       124 ~~~~~i~~~~g-~id~lvnnAG~  145 (384)
                      ++.+++.+..+ ++|++|+|+|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence            55666666544 69999999984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.91  E-value=9.1e-06  Score=71.92  Aligned_cols=46  Identities=26%  Similarity=0.307  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||.++.++||+||+|+||+++|++.+..
T Consensus       148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~  193 (247)
T 4hp8_A          148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL  193 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc
Confidence            4457999999999999999999999999999999999999998753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.91  E-value=1.7e-05  Score=73.54  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.+.++.+...|++|+++++++++.+... ++     +..   ...|.++.+..+++.+..  ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~~~~~~--~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHEDVAKRVLELT--DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHT--TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCccHHHHHHHHh--CCC
Confidence            5789999999999999999999999999999999876655432 22     222   234666544333332221  113


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999985

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.89  E-value=1.9e-05  Score=73.64  Aligned_cols=80  Identities=15%  Similarity=0.121  Sum_probs=56.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+||||.+.++.+...|++|++++++.++.+...+ +     +..   ...|.++.+..+++.+..  ...
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~---~~~~~~~~~~~~~~~~~~--~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAA---YVIDTSTAPLYETVMELT--NGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCc---EEEeCCcccHHHHHHHHh--CCC
Confidence            57899999999999999999998999999999999877654432 2     222   124665544333322211  113


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999985

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.87  E-value=0.00071  Score=60.66  Aligned_cols=45  Identities=27%  Similarity=0.303  Sum_probs=41.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  207 (270)
T 3is3_A          163 KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE  207 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence            445799999999999999999999999999999999999999763

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.86  E-value=2.6e-05  Score=69.21  Aligned_cols=45  Identities=20%  Similarity=0.244  Sum_probs=38.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||++|.. +|+||+|+||+++|++.+..
T Consensus       142 ~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~  186 (247)
T 3ged_A          142 DSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF  186 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH
Confidence            3457999999999999999999975 99999999999999987654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.86  E-value=2.2e-05  Score=70.41  Aligned_cols=44  Identities=27%  Similarity=0.391  Sum_probs=40.9

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.||.+|.++||+||+|+||+++|++.+.
T Consensus       150 ~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          150 TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence            45699999999999999999999999999999999999998764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.83  E-value=0.00015  Score=67.05  Aligned_cols=114  Identities=17%  Similarity=0.052  Sum_probs=74.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ..++||||+|.+|..++..|+++|  .+|++.+++++  +....++.......++..    +++.++.++++       .
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------~   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------T   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------C
Confidence            479999999999999999999998  78999998765  333334433211112221    23334444333       3


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGS  189 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS  189 (384)
                      ..|++|+.||......   .+.   ...+..|+.+...+.+.+.+.-. .+++++|
T Consensus        76 gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             TCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            6899999999743211   122   23578899999999988887653 4555554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.83  E-value=9.7e-05  Score=69.43  Aligned_cols=78  Identities=21%  Similarity=0.149  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|+.++++...+...     ..+   .++..+.+++.+.+      
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~---~~~~~~~~~~~~~~------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRV---ELLYSNSAEIETAV------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGS---EEEECCHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----cee---EeeeCCHHHHHHHH------
Confidence            366799999999 999999999999999999999999877665543321     122   12333444443322      


Q ss_pred             CCCccEEEECCCCC
Q psy2854         133 YPKIHVLINNAGVS  146 (384)
Q Consensus       133 ~g~id~lvnnAG~~  146 (384)
                       ...|++||++|..
T Consensus       229 -~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 -AEADLLIGAVLVP  241 (361)
T ss_dssp             -HTCSEEEECCCCT
T ss_pred             -cCCCEEEECCCcC
Confidence             2689999999874

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.82  E-value=9.9e-05  Score=60.25  Aligned_cols=78  Identities=9%  Similarity=0.031  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .++.++|.|+ |.+|+.+++.|.+.|++|++++++. ++.+...+    .. ...+.++..|.++++.++++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~----~~-~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQ----RL-GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHH----HH-CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHH----hh-cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            4567888886 9999999999999999999999974 33333222    11 23477889999998866543      13


Q ss_pred             CCccEEEECCC
Q psy2854         134 PKIHVLINNAG  144 (384)
Q Consensus       134 g~id~lvnnAG  144 (384)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            46899988875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.82  E-value=3.3e-05  Score=69.24  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=37.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||+++|++.+..
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  202 (262)
T 3ksu_A          157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ  202 (262)
T ss_dssp             CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence            3457999999999999999999999999999999999999997754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.81  E-value=5.7e-05  Score=70.49  Aligned_cols=77  Identities=19%  Similarity=0.290  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+||||.+.++.+...|++|++++++.++.+... ++     +... .  .|..  ++.   .+++.+..+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~-v--~~~~--~~~---~~~v~~~~~  224 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GADI-V--LPLE--EGW---AKAVREATG  224 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE-E--EESS--TTH---HHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcE-E--ecCc--hhH---HHHHHHHhC
Confidence            5889999999999999999999999999999999887764332 22     2221 2  3443  222   233333332


Q ss_pred             --CccEEEECCCC
Q psy2854         135 --KIHVLINNAGV  145 (384)
Q Consensus       135 --~id~lvnnAG~  145 (384)
                        ++|++++|+|.
T Consensus       225 ~~g~Dvvid~~g~  237 (342)
T 4eye_A          225 GAGVDMVVDPIGG  237 (342)
T ss_dssp             TSCEEEEEESCC-
T ss_pred             CCCceEEEECCch
Confidence              69999999995

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.81  E-value=4.5e-05  Score=71.89  Aligned_cols=76  Identities=17%  Similarity=0.267  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +++|++|+|+|| ||+|..+++.+...|++|++++++.   ++.+. .+++     +  ...+  | ++ +-.+++ .+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~-----g--a~~v--~-~~-~~~~~~-~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET-----K--TNYY--N-SS-NGYDKL-KD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH-----T--CEEE--E-CT-TCSHHH-HH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh-----C--Ccee--c-hH-HHHHHH-HH-
Confidence            567999999999 9999999999999999999999987   55432 2222     2  2223  6 55 222222 22 


Q ss_pred             HHhCCCccEEEECCCC
Q psy2854         130 MKQYPKIHVLINNAGV  145 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~  145 (384)
                      . . +++|++|+++|.
T Consensus       243 ~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-H-CCEEEEEECCCC
T ss_pred             h-C-CCCCEEEECCCC
Confidence            2 2 689999999986

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.79  E-value=3.9e-05  Score=70.08  Aligned_cols=78  Identities=15%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++...   ..      ++.+.+++       .+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~---~~------~~~~~~~~-------~~  200 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER---RS------AYFSLAEA-------ET  200 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS---SC------CEECHHHH-------HH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc---cC------ceeeHHHH-------Hh
Confidence            467899999997 7999999999999998 8999999987766655443110   00      11122222       22


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                      .....|++||+.+...
T Consensus       201 ~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          201 RLAEYDIIINTTSVGM  216 (297)
T ss_dssp             TGGGCSEEEECSCTTC
T ss_pred             hhccCCEEEECCCCCC
Confidence            3347899999998754

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.79  E-value=0.00019  Score=64.43  Aligned_cols=47  Identities=23%  Similarity=0.377  Sum_probs=43.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||++.|++.+...
T Consensus       155 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          155 DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence            44579999999999999999999999999999999999999988653

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.78  E-value=0.00013  Score=65.94  Aligned_cols=76  Identities=17%  Similarity=0.334  Sum_probs=57.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++...   ..+...  +..+..           
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~---~~~~~~--~~~~l~-----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY---GEVKAQ--AFEQLK-----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG---SCEEEE--EGGGCC-----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc---CCeeEe--eHHHhc-----------
Confidence            578999999998 7999999999999996 8999999988887777766432   123333  222110           


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                        ...|++||+.+...
T Consensus       186 --~~aDiIInaTp~gm  199 (281)
T 3o8q_A          186 --QSYDVIINSTSASL  199 (281)
T ss_dssp             --SCEEEEEECSCCCC
T ss_pred             --CCCCEEEEcCcCCC
Confidence              36899999987644

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.77  E-value=0.00024  Score=67.14  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.|++++|+|+ |+||+++++.+...|++|++.+|+.++.+...+.+     +..+   .+|.++.+++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 99999999999999999999999976655443222     2222   245555665555442     


Q ss_pred             CCCccEEEECCCCC
Q psy2854         133 YPKIHVLINNAGVS  146 (384)
Q Consensus       133 ~g~id~lvnnAG~~  146 (384)
                        ..|++|++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              579999999863

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.76  E-value=4.7e-06  Score=75.99  Aligned_cols=68  Identities=24%  Similarity=0.258  Sum_probs=42.7

Q ss_pred             CccccccccccccchHHHHHHhhcCC--ceEEEeecCceeccccccCChhHHHHHHHHHHHHHHhcChhhh
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKG--VDVCVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMYMRSANQL  375 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~--v~v~~~~pg~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (384)
                      ...|+.||.+...+++++++++.+.|  |++++||||+|+|++.++.+. .....+......+++++||++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  231 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR-KLGDALMSAATRVVATDADFG  231 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch-HHHHHHHHHHHHHHhCCHHHH
Confidence            35799999999999999999998877  999999999999999987531 111222233334455566664

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.75  E-value=9.7e-05  Score=69.08  Aligned_cols=79  Identities=9%  Similarity=-0.025  Sum_probs=55.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++++|+||+||||.+.++.+...|++|++++++.++.+... ++     +..   ...|..+.+..+.+.+....  .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAA---HVLNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCS---EEEETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCcHHHHHHHHHHhcC--CC
Confidence            479999999999999999999999999999999887765442 22     222   12465554433333322221  27


Q ss_pred             ccEEEECCCC
Q psy2854         136 IHVLINNAGV  145 (384)
Q Consensus       136 id~lvnnAG~  145 (384)
                      +|++++++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.75  E-value=6.3e-06  Score=72.76  Aligned_cols=46  Identities=30%  Similarity=0.400  Sum_probs=39.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||.+|.++||+||+|+||+++|++.+..
T Consensus       143 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~  188 (242)
T 4b79_A          143 DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL  188 (242)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc
Confidence            4457999999999999999999999999999999999999998764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.75  E-value=7.7e-05  Score=67.10  Aligned_cols=76  Identities=13%  Similarity=0.310  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++..    ..+...  +..+.+          +
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l~----------~  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEALE----------G  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGGT----------T
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHhc----------c
Confidence            578999999998 7999999999999996 899999998887776665532    223332  222211          1


Q ss_pred             hCCCccEEEECCCCCC
Q psy2854         132 QYPKIHVLINNAGVSV  147 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~  147 (384)
                        ...|++||+.....
T Consensus       180 --~~~DivInaTp~gm  193 (272)
T 3pwz_A          180 --QSFDIVVNATSASL  193 (272)
T ss_dssp             --CCCSEEEECSSGGG
T ss_pred             --cCCCEEEECCCCCC
Confidence              36899999976643

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.74  E-value=0.0011  Score=59.63  Aligned_cols=46  Identities=22%  Similarity=0.201  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  221 (271)
T 3v2g_A          176 GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD  221 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc
Confidence            4457999999999999999999999999999999999999997653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.74  E-value=9.1e-05  Score=71.94  Aligned_cols=85  Identities=15%  Similarity=0.202  Sum_probs=60.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEE--ee--------cCCHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME--LN--------LASFDSIKN  124 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D--------vs~~~~v~~  124 (384)
                      .|++|+|+||+||+|...++.+...|++|+++++++++.+.+ +++     +....+-.  .|        .++.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            588999999999999999999999999999999886665433 222     22211110  11        245666777


Q ss_pred             HHHHHHHhCC--CccEEEECCCC
Q psy2854         125 FAKNVMKQYP--KIHVLINNAGV  145 (384)
Q Consensus       125 ~~~~i~~~~g--~id~lvnnAG~  145 (384)
                      +.+++.+..+  ++|++|+++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            7777776543  79999999984

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.73  E-value=0.00041  Score=62.62  Aligned_cols=46  Identities=28%  Similarity=0.379  Sum_probs=37.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||+++|++.+..
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc
Confidence            3457999999999999999999999999999999999999998754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.72  E-value=0.00017  Score=57.40  Aligned_cols=75  Identities=19%  Similarity=0.240  Sum_probs=54.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|++++.++    +.+.   ..+..+..|.++.+.+.+      ....+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~----~~~~---~~~~~~~~d~~~~~~l~~------~~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK----ASAE---IDALVINGDCTKIKTLED------AGIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHH---CSSEEEESCTTSHHHHHH------TTTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHh---cCcEEEEcCCCCHHHHHH------cCccc
Confidence            357889987 999999999999999999999998655433    3222   134567789888765432      12347


Q ss_pred             ccEEEECCC
Q psy2854         136 IHVLINNAG  144 (384)
Q Consensus       136 id~lvnnAG  144 (384)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999975

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.71  E-value=4.5e-05  Score=68.58  Aligned_cols=45  Identities=24%  Similarity=0.219  Sum_probs=36.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          171 SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence            445799999999999999999999999999999999999999765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.70  E-value=4.1e-05  Score=67.96  Aligned_cols=47  Identities=23%  Similarity=0.351  Sum_probs=43.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..+
T Consensus       151 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  197 (248)
T 3op4_A          151 GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN  197 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC
Confidence            44679999999999999999999999999999999999999988654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.70  E-value=9.7e-05  Score=65.70  Aligned_cols=46  Identities=13%  Similarity=0.097  Sum_probs=32.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceE-EEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDV-CVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v-~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.|++++.++||+| |+++||+++|++.+..
T Consensus       151 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          151 GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc
Confidence            445799999999999999999999999999 9999999999998764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.68  E-value=0.00013  Score=64.79  Aligned_cols=83  Identities=13%  Similarity=0.179  Sum_probs=63.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .|.+...+.+.+..+..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            466789999996 7999999999999997 899999987                   7788888888776555566666


Q ss_pred             EeecCCHHHHHHHHHHHHHhCCCccEEEECCC
Q psy2854         113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAG  144 (384)
Q Consensus       113 ~~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG  144 (384)
                      ..++++ +.+.+++       ...|++|++.+
T Consensus       107 ~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             eccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            666653 3333332       26799998864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.67  E-value=7.3e-05  Score=70.34  Aligned_cols=78  Identities=21%  Similarity=0.225  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||...++.+...|++|+++++++++.+...    + . +...   ..|.++.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~-~-Ga~~---~~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----S-L-GCDR---PINYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-T-TCSE---EEETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----H-c-CCcE---EEecCChh-HHHHHHHhc--CC
Confidence            4789999999999999999999999999999999866554332    2 2 2221   24555433 222232221  24


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.67  E-value=7.9e-05  Score=67.56  Aligned_cols=45  Identities=13%  Similarity=0.089  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|++++.++||+||+|+||+++|++.+.
T Consensus       174 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          174 HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            445799999999999999999999999999999999999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.66  E-value=6.1e-05  Score=67.46  Aligned_cols=46  Identities=15%  Similarity=0.186  Sum_probs=37.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence            4567999999999999999999999999999999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.66  E-value=0.0002  Score=64.46  Aligned_cols=46  Identities=11%  Similarity=-0.134  Sum_probs=42.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  199 (275)
T 2pd4_A          154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI  199 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc
Confidence            4457999999999999999999999999999999999999998764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.65  E-value=0.00041  Score=63.77  Aligned_cols=115  Identities=18%  Similarity=0.072  Sum_probs=74.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCR--SMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r--~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++||||+|.+|..++..|+..|.  .+.+.++  +.++.+....++.....  +..+.+...|  |  ++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chH-------H
Confidence            589999999999999999998885  5888888  66555554445543211  1122222211  1  111       1


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGS  189 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS  189 (384)
                      .+.+.|++||.||.... +  ..+.   ...+..|+.+...+.+.+..+-.++++++|
T Consensus        71 al~gaD~Vi~~Ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~vlv~S  122 (313)
T 1hye_A           71 IIDESDVVIITSGVPRK-E--GMSR---MDLAKTNAKIVGKYAKKIAEICDTKIFVIT  122 (313)
T ss_dssp             GGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred             HhCCCCEEEECCCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence            23478999999997432 1  1122   346899999999999998876544555554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.65  E-value=9.4e-05  Score=67.58  Aligned_cols=45  Identities=20%  Similarity=0.225  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||+++|++.+.
T Consensus       187 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          187 NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence            445799999999999999999999999999999999999999864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.64  E-value=7.8e-05  Score=66.49  Aligned_cols=46  Identities=17%  Similarity=0.232  Sum_probs=41.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++..+||+||+++||++.|++.+..
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          156 RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence            4467999999999999999999999999999999999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.64  E-value=6.1e-05  Score=66.78  Aligned_cols=47  Identities=17%  Similarity=0.147  Sum_probs=42.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..+
T Consensus       149 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  195 (247)
T 3rwb_A          149 NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP  195 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC
Confidence            44579999999999999999999999999999999999999877643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.64  E-value=5.7e-05  Score=66.91  Aligned_cols=47  Identities=17%  Similarity=0.264  Sum_probs=43.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+||+++||++.|++.+...
T Consensus       150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  196 (246)
T 3osu_A          150 GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS  196 (246)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC
Confidence            44579999999999999999999999999999999999999987653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.64  E-value=0.00071  Score=61.85  Aligned_cols=112  Identities=14%  Similarity=0.069  Sum_probs=74.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCR--SMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++||||+|.+|.+++..|+..|.  ++++.++  +.++++....++..... ...+.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999998875  6888998  77666554555544321 12233222 2  2221           


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGS  189 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS  189 (384)
                      +...|++|+.||.... +  ..+.   ...+..|+.+...+.+.+..+-. .+++++|
T Consensus        68 ~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQ-P--GQTR---IDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             GTTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hCCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            2378999999997422 1  1122   23588999999999988887643 4555544

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.64  E-value=0.0001  Score=66.39  Aligned_cols=46  Identities=11%  Similarity=-0.026  Sum_probs=36.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||++.|++.+..
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (272)
T 4dyv_A          173 YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM  218 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh
Confidence            4457999999999999999999999999999999999999998764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.62  E-value=9.5e-05  Score=67.63  Aligned_cols=73  Identities=12%  Similarity=0.129  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS-FDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~  133 (384)
                      .|++++|+||+||+|.++++.+...|++|+++++++++.+... ++     +..   ...|..+ .+    +.+++    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~---~~~~~~~~~~----~~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAE---EAATYAEVPE----RAKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCS---EEEEGGGHHH----HHHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEECCcchh----HHHHh----
Confidence            4789999999999999999999999999999999887765432 22     222   1246554 32    22222    


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +++|++|+ +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            57999999 884

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.62  E-value=3.6e-05  Score=73.10  Aligned_cols=45  Identities=16%  Similarity=-0.035  Sum_probs=42.4

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      .+|+.||.+...+++.||.+|..+||+||+|+||++.|++.+..+
T Consensus       259 ~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip  303 (422)
T 3s8m_A          259 GALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIP  303 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCC
Confidence            469999999999999999999999999999999999999988765

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.61  E-value=0.00019  Score=63.68  Aligned_cols=46  Identities=20%  Similarity=0.221  Sum_probs=42.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||+++|++.+..
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  202 (255)
T 3icc_A          157 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL  202 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT
T ss_pred             CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh
Confidence            3457999999999999999999999999999999999999998865

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.61  E-value=0.00015  Score=64.47  Aligned_cols=47  Identities=28%  Similarity=0.341  Sum_probs=43.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++..+||++++++||++.|++.+...
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  205 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR  205 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC
Confidence            45679999999999999999999999999999999999999988754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.61  E-value=0.00021  Score=66.44  Aligned_cols=77  Identities=18%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+|| ||+|..+++.+...|++|++++|++++.+...    + . +..   ..+|.++.+ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~-l-Ga~---~~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----E-L-GAD---LVVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----H-T-TCS---EEECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-C-CCC---EEecCCCcc-HHHHHHHHh---C
Confidence            4789999999 88999999999999999999999876655432    2 2 222   235776543 222222222   5


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.61  E-value=0.00013  Score=65.70  Aligned_cols=45  Identities=18%  Similarity=0.061  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|++++.++||+||+|+||+++|++.+.
T Consensus       170 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          170 FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            345799999999999999999999999999999999999999764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.60  E-value=0.00036  Score=62.04  Aligned_cols=44  Identities=27%  Similarity=0.218  Sum_probs=39.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++  .+|+||+|+||+++|++.+..
T Consensus       146 ~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          146 SWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCC
T ss_pred             CcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHh
Confidence            44579999999999999999997  689999999999999998754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.59  E-value=0.00019  Score=67.00  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+|++|...++.+...|++|++++++.++.+...+ +     +...   ..|..+  +..+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---vi~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI---VLNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE---EECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE---EEECCc--cHHHHHHHh--CCC
Confidence            58899999999999999999999999999999998766444322 2     2221   234433  222222322  234


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|++++++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.59  E-value=0.00016  Score=64.96  Aligned_cols=44  Identities=20%  Similarity=0.267  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          155 MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            44579999999999999999999999999999999999999887

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.56  E-value=0.00017  Score=65.30  Aligned_cols=46  Identities=26%  Similarity=0.365  Sum_probs=42.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence            4457999999999999999999999999999999999999998754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.55  E-value=0.00045  Score=62.52  Aligned_cols=92  Identities=15%  Similarity=0.213  Sum_probs=71.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHHHhcCCcEEEE
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM------------------IRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      .++++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                  .|.+.+.+.+.+..+..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4577889999986 8999999999999996 699988876                  6777777888777777788888


Q ss_pred             EeecCCHHHHHHHHHHHHHh----CCCccEEEECCC
Q psy2854         113 ELNLASFDSIKNFAKNVMKQ----YPKIHVLINNAG  144 (384)
Q Consensus       113 ~~Dvs~~~~v~~~~~~i~~~----~g~id~lvnnAG  144 (384)
                      ..++++.+.++++++.+...    ....|++|.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            88888877777776654321    136899886653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.55  E-value=0.00016  Score=64.81  Aligned_cols=45  Identities=18%  Similarity=0.158  Sum_probs=41.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  199 (265)
T 3lf2_A          155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRR  199 (265)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhh
Confidence            345799999999999999999999999999999999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.54  E-value=0.00027  Score=63.20  Aligned_cols=47  Identities=11%  Similarity=-0.109  Sum_probs=42.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+|++|+||+++|++.+...
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence            34579999999999999999999999999999999999999988753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.54  E-value=0.00022  Score=67.14  Aligned_cols=45  Identities=11%  Similarity=-0.165  Sum_probs=42.5

Q ss_pred             ccccccccccccchHHHHHHhhcC-CceEEEeecCceeccccccCC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADK-GVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~-~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      .+|+.||.+...+++.||.+|... ||+||+|+||++.|++....+
T Consensus       244 ~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip  289 (405)
T 3zu3_A          244 GSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIP  289 (405)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTST
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCC
Confidence            579999999999999999999999 999999999999999988765

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.54  E-value=0.00023  Score=63.46  Aligned_cols=47  Identities=19%  Similarity=0.064  Sum_probs=43.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++..+||+||+++||++.|++.+...
T Consensus       150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            45679999999999999999999999999999999999999988753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.54  E-value=0.00027  Score=63.19  Aligned_cols=46  Identities=17%  Similarity=-0.047  Sum_probs=37.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++..+||+|++|+||+++|++.+..
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  208 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI  208 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc
Confidence            4457999999999999999999999999999999999999998865

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.53  E-value=0.0002  Score=65.21  Aligned_cols=46  Identities=11%  Similarity=-0.103  Sum_probs=37.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          179 NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence            4457999999999999999999999999999999999999998764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.53  E-value=0.00016  Score=64.71  Aligned_cols=46  Identities=17%  Similarity=0.156  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  202 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN  202 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc
Confidence            4457999999999999999999999999999999999999987654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.53  E-value=0.00014  Score=65.90  Aligned_cols=46  Identities=11%  Similarity=0.003  Sum_probs=37.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||++.|++.+..
T Consensus       182 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          182 NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh
Confidence            4467999999999999999999999999999999999999987653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.53  E-value=0.00025  Score=66.06  Aligned_cols=77  Identities=16%  Similarity=0.192  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||||.+.++.+...|++|+++ ++.++.+.. +++     +..  .  +| .+.+ ..+.+.+... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~--~--i~-~~~~-~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GAT--P--ID-ASRE-PEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSE--E--EE-TTSC-HHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCC--E--ec-cCCC-HHHHHHHHhc-CC
Confidence            57899999999999999999999999999988 766554322 222     222  2  45 3333 3333332221 23


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++++++|.
T Consensus       216 g~D~vid~~g~  226 (343)
T 3gaz_A          216 GFDLVYDTLGG  226 (343)
T ss_dssp             CEEEEEESSCT
T ss_pred             CceEEEECCCc
Confidence            79999999983

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.52  E-value=0.0003  Score=62.61  Aligned_cols=45  Identities=24%  Similarity=0.257  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       148 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          148 GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            445799999999999999999999999999999999999998764

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.51  E-value=0.00014  Score=66.19  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=62.2

Q ss_pred             CCCCE-EEEeCCCC-----------------c-hhHHHHHHHHHCCCEEEEEecCchhHH------HH--HHHHHHH-hc
Q psy2854          54 MEGKV-CIITGANS-----------------G-IGYETAKELAKLKATVVLGCRSMIRGQ------EA--LEKLKKE-VQ  105 (384)
Q Consensus        54 ~~~k~-vlITGas~-----------------G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~------~~--~~~l~~~-~~  105 (384)
                      +.||. |+||+|..                 | .|.++|++++++|+.|+++.+...-..      ..  .+.+... ..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            46777 99998876                 6 999999999999999999888532110      00  0100000 00


Q ss_pred             CCcEEEEEeecCCHHHHHHHHHHH------------------------------HHhCCCccEEEECCCCCCCC
Q psy2854         106 DGQIVLMELNLASFDSIKNFAKNV------------------------------MKQYPKIHVLINNAGVSVPI  149 (384)
Q Consensus       106 ~~~~~~~~~Dvs~~~~v~~~~~~i------------------------------~~~~g~id~lvnnAG~~~~~  149 (384)
                      +..+..+.+|+.+.+++.+++.+.                              .+.+++.|++|.+|++....
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            123445677777766666665443                              23457899999999996544

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.51  E-value=0.0002  Score=64.59  Aligned_cols=45  Identities=18%  Similarity=0.145  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||+++|++.+.
T Consensus       177 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          177 VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc
Confidence            334599999999999999999999999999999999999998765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.51  E-value=0.00023  Score=64.21  Aligned_cols=45  Identities=20%  Similarity=0.173  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence            445799999999999999999999999999999999999999764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.51  E-value=0.00018  Score=63.26  Aligned_cols=45  Identities=18%  Similarity=0.247  Sum_probs=39.0

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.+++++.++||+||+|+||+++|++++..
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc
Confidence            357999999999999999999999999999999999999998764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.51  E-value=0.00028  Score=66.33  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=55.4

Q ss_pred             CCCCC--EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGK--VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k--~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +++||  .|+|.|| |++|+.+|+.|++ ..+|.+++|+.+++++.         ......+.+|++|.+++.++++   
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~---   76 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK---   76 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT---
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh---
Confidence            45554  5888898 9999999998865 57899999986655443         1245668899999998887764   


Q ss_pred             HhCCCccEEEECCCC
Q psy2854         131 KQYPKIHVLINNAGV  145 (384)
Q Consensus       131 ~~~g~id~lvnnAG~  145 (384)
                          +.|++||+++.
T Consensus        77 ----~~DvVi~~~p~   87 (365)
T 3abi_A           77 ----EFELVIGALPG   87 (365)
T ss_dssp             ----TCSEEEECCCG
T ss_pred             ----CCCEEEEecCC
Confidence                57999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.50  E-value=0.00021  Score=63.44  Aligned_cols=46  Identities=28%  Similarity=0.586  Sum_probs=42.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  199 (250)
T 3nyw_A          154 DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA  199 (250)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc
Confidence            3567999999999999999999999999999999999999987743

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.50  E-value=0.00023  Score=63.97  Aligned_cols=45  Identities=16%  Similarity=0.262  Sum_probs=41.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (271)
T 4ibo_A          171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQA  215 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhh
Confidence            445799999999999999999999999999999999999999875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.50  E-value=0.00015  Score=59.39  Aligned_cols=80  Identities=15%  Similarity=0.089  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+..++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+...+       ......+..|.++.+.+.+.      
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT------
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc------
Confidence            5667889999996 999999999999999999999999776543210       12344567788876544321      


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                      ...+.|++|.+.+.
T Consensus        81 ~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 GMEKADMVFAFTND   94 (155)
T ss_dssp             TGGGCSEEEECSSC
T ss_pred             CcccCCEEEEEeCC
Confidence            12368999998763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.49  E-value=0.00021  Score=64.47  Aligned_cols=45  Identities=20%  Similarity=0.178  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       174 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          174 GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence            345799999999999999999999999999999999999998764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.48  E-value=0.00021  Score=63.09  Aligned_cols=45  Identities=33%  Similarity=0.383  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|++++.++||+||+|+||++.|++.+.
T Consensus       136 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  180 (244)
T 4e4y_A          136 NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN  180 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH
Confidence            345799999999999999999999999999999999999998775

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.46  E-value=0.00022  Score=67.17  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+|+ ||||...++.+...|++|++++++.++.+...+++     +..   ...|..+.+.++       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~---~v~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GAD---SFLVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCS---EEEETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCc---eEEeccCHHHHH-------HhhC
Confidence            5789999996 99999999999999999999999887765543222     222   234666654332       2235


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999986

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.46  E-value=9.5e-05  Score=66.38  Aligned_cols=47  Identities=19%  Similarity=0.367  Sum_probs=42.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+...
T Consensus       169 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~  215 (266)
T 3grp_A          169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN  215 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC
Confidence            34579999999999999999999999999999999999999987653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.45  E-value=0.00044  Score=65.95  Aligned_cols=45  Identities=11%  Similarity=-0.228  Sum_probs=42.6

Q ss_pred             ccccccccccccchHHHHHHhhc-CCceEEEeecCceeccccccCC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      .+|+.||.+...+++.||.+|.+ +||+||+|+||++.|++.+..+
T Consensus       258 ~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip  303 (418)
T 4eue_A          258 GTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIP  303 (418)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCC
Confidence            57999999999999999999999 9999999999999999998775

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.45  E-value=0.00019  Score=64.26  Aligned_cols=45  Identities=24%  Similarity=0.307  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       167 ~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  211 (266)
T 4egf_A          167 DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQR  211 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhh
Confidence            445799999999999999999999999999999999999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.45  E-value=8.4e-05  Score=66.88  Aligned_cols=47  Identities=19%  Similarity=0.255  Sum_probs=42.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..+
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (270)
T 3ftp_A          173 GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP  219 (270)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC
Confidence            34579999999999999999999999999999999999999987653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.45  E-value=0.00026  Score=63.99  Aligned_cols=45  Identities=29%  Similarity=0.443  Sum_probs=37.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||++.|++.+.
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  216 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK  216 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh
Confidence            345799999999999999999999999999999999999999765

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.45  E-value=0.0004  Score=63.27  Aligned_cols=46  Identities=11%  Similarity=-0.113  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||++.|++.+..
T Consensus       178 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  223 (296)
T 3k31_A          178 HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI  223 (296)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc
Confidence            4457999999999999999999999999999999999999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.43  E-value=0.00063  Score=60.65  Aligned_cols=46  Identities=20%  Similarity=0.015  Sum_probs=41.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  201 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI  201 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc
Confidence            3457999999999999999999999999999999999999987754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.42  E-value=0.00018  Score=64.35  Aligned_cols=45  Identities=22%  Similarity=0.328  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          156 KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH
Confidence            445799999999999999999999999999999999999998764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.42  E-value=0.00015  Score=64.77  Aligned_cols=45  Identities=29%  Similarity=0.327  Sum_probs=36.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++... |+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~  198 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTF  198 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC------
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccc
Confidence            44579999999999999999999776 9999999999999998754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.41  E-value=0.00036  Score=63.04  Aligned_cols=45  Identities=20%  Similarity=0.132  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+.
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence            445799999999999999999999999999999999999998764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.41  E-value=0.0002  Score=64.31  Aligned_cols=45  Identities=20%  Similarity=0.308  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       174 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          174 GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc
Confidence            445799999999999999999999999999999999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.41  E-value=0.00043  Score=61.29  Aligned_cols=45  Identities=16%  Similarity=0.146  Sum_probs=28.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.+++++.++||+|++++||++.|++.+..
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  199 (253)
T 3qiv_A          155 SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT  199 (253)
T ss_dssp             -----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc
Confidence            456999999999999999999999999999999999999988754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.40  E-value=0.00034  Score=63.11  Aligned_cols=45  Identities=16%  Similarity=0.115  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          171 GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH
Confidence            345799999999999999999999999999999999999998664

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.40  E-value=0.00022  Score=64.92  Aligned_cols=46  Identities=24%  Similarity=0.229  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+..
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence            4567999999999999999999999999999999999999987754

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.39  E-value=0.0003  Score=63.02  Aligned_cols=45  Identities=22%  Similarity=0.389  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+.
T Consensus       162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence            445799999999999999999999999999999999999998764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.39  E-value=0.00032  Score=66.19  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++++|+||+||+|...++.+...|++|+++++ .++.+. +++    . +..   ...|.++.+..    +++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~----l-Ga~---~v~~~~~~~~~----~~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRK----L-GAD---DVIDYKSGSVE----EQLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHH----T-TCS---EEEETTSSCHH----HHHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHH----c-CCC---EEEECCchHHH----HHHhh-cC
Confidence            5889999999999999999998899999998884 444332 222    2 222   12465554322    23332 35


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|++|+++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=97.39  E-value=0.00013  Score=75.63  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=32.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|++|+|.||+||+|.+.++.....|++|+.++++.
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~  380 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED  380 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence            588999999999999999988888999999887654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.38  E-value=0.00028  Score=63.70  Aligned_cols=45  Identities=27%  Similarity=0.392  Sum_probs=41.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+.
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          171 YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH
Confidence            445799999999999999999999999999999999999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.38  E-value=0.0003  Score=63.54  Aligned_cols=45  Identities=20%  Similarity=0.009  Sum_probs=41.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++..+||+||+++||++.|++.+.
T Consensus       160 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          160 WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence            345799999999999999999999999999999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.37  E-value=0.0004  Score=63.23  Aligned_cols=44  Identities=27%  Similarity=0.340  Sum_probs=40.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+|.|++.+
T Consensus       195 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  238 (294)
T 3r3s_A          195 HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI  238 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccc
Confidence            44579999999999999999999999999999999999999843

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.36  E-value=0.00018  Score=63.62  Aligned_cols=47  Identities=26%  Similarity=0.417  Sum_probs=43.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||.+++++||++.|++.+...
T Consensus       150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  196 (247)
T 3lyl_A          150 GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT  196 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc
Confidence            44579999999999999999999999999999999999999988764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.36  E-value=0.00024  Score=63.59  Aligned_cols=46  Identities=17%  Similarity=0.211  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.+.||+|++++||+++|++.+..
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc
Confidence            4467999999999999999999999999999999999999998764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.36  E-value=0.00092  Score=53.52  Aligned_cols=77  Identities=14%  Similarity=0.052  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++ .++|.|+ |.+|..+++.|.+.|++|+++++++++.++.    .+    ..+.++..|.++++.++++      .
T Consensus         5 ~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~----~~----~g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            5 DICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDEL----RE----RGVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH----HH----TTCEEEESCTTSHHHHHHT------T
T ss_pred             cCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH----HH----cCCCEEECCCCCHHHHHhc------C
Confidence            4444 5677786 8899999999999999999999997655443    22    2456788999998866543      1


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      ..+.|.+|.+.+-
T Consensus        69 i~~ad~vi~~~~~   81 (140)
T 3fwz_A           69 LECAKWLILTIPN   81 (140)
T ss_dssp             GGGCSEEEECCSC
T ss_pred             cccCCEEEEECCC
Confidence            2367888887653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.36  E-value=0.00038  Score=62.73  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=41.9

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.+++++.+.||+||+|+||+|+|++.+..
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence            457999999999999999999999999999999999999998764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.35  E-value=0.00017  Score=58.21  Aligned_cols=71  Identities=15%  Similarity=0.187  Sum_probs=51.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.++..+++     +.  ..  .+..+.   .++++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~~--~~--~~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----EY--EY--VLINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----TC--EE--EECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----CC--ce--EeecCH---HHHhc-------C
Confidence            789999996 99999999999999999999999987766554443     11  11  123332   22222       5


Q ss_pred             ccEEEECCCCC
Q psy2854         136 IHVLINNAGVS  146 (384)
Q Consensus       136 id~lvnnAG~~  146 (384)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            79999998864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.35  E-value=0.00023  Score=65.98  Aligned_cols=43  Identities=7%  Similarity=-0.067  Sum_probs=40.8

Q ss_pred             cccccccccccchHHHHHHhhc-CCceEEEeecCceeccccccC
Q psy2854         309 AYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       309 ~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      .|+.||.+...+++.|++++.. +||+||+|+||+|+|++.+..
T Consensus       185 ~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~  228 (329)
T 3lt0_A          185 GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAI  228 (329)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhh
Confidence            7999999999999999999988 899999999999999998864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.35  E-value=0.00024  Score=63.72  Aligned_cols=46  Identities=26%  Similarity=0.372  Sum_probs=41.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||+++|++.+..
T Consensus       171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence            3457999999999999999999999999999999999999998764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.35  E-value=0.00038  Score=62.81  Aligned_cols=47  Identities=17%  Similarity=-0.046  Sum_probs=43.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||+++|++.+...
T Consensus       175 ~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          175 SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence            44579999999999999999999999999999999999999988654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.35  E-value=0.00036  Score=61.54  Aligned_cols=45  Identities=20%  Similarity=0.100  Sum_probs=40.7

Q ss_pred             CCccccccccccccchHHHHHHhhc-CCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+ .+|+||+|+||+++|++.+.
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~  208 (247)
T 3i1j_A          163 NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQ  208 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchh
Confidence            4467999999999999999999976 79999999999999998754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.34  E-value=0.00042  Score=63.77  Aligned_cols=44  Identities=11%  Similarity=-0.026  Sum_probs=26.9

Q ss_pred             ccccccccccccchHHHHHHhhc-CCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.|++++.. +||+||+|+||+++|++.+..
T Consensus       204 ~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~  248 (319)
T 2ptg_A          204 GGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAI  248 (319)
T ss_dssp             ---------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhc
Confidence            37999999999999999999985 899999999999999997653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.34  E-value=0.00034  Score=64.44  Aligned_cols=45  Identities=20%  Similarity=0.117  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|++++.+.||+||+|+||+|.|++.+.
T Consensus       204 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  248 (317)
T 3oec_A          204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN  248 (317)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc
Confidence            345799999999999999999999999999999999999998754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.33  E-value=0.00055  Score=60.52  Aligned_cols=46  Identities=28%  Similarity=0.363  Sum_probs=42.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          151 NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc
Confidence            3457999999999999999999999999999999999999997754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.33  E-value=0.001  Score=59.41  Aligned_cols=68  Identities=22%  Similarity=0.104  Sum_probs=51.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.++.. ++     +  +..  .+..+.              ..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-----~--~~~--~~~~~l--------------~~  172 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-----G--CDC--FMEPPK--------------SA  172 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-----T--CEE--ESSCCS--------------SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-----C--CeE--ecHHHh--------------cc
Confidence            789999997 99999999999999999999999998877765 43     1  221  222221              16


Q ss_pred             ccEEEECCCCCCC
Q psy2854         136 IHVLINNAGVSVP  148 (384)
Q Consensus       136 id~lvnnAG~~~~  148 (384)
                      .|++||+......
T Consensus       173 ~DiVInaTp~Gm~  185 (269)
T 3phh_A          173 FDLIINATSASLH  185 (269)
T ss_dssp             CSEEEECCTTCCC
T ss_pred             CCEEEEcccCCCC
Confidence            8999999776543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.32  E-value=0.00064  Score=61.46  Aligned_cols=46  Identities=13%  Similarity=-0.102  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI  215 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc
Confidence            3457999999999999999999999999999999999999997754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.31  E-value=0.00052  Score=61.86  Aligned_cols=44  Identities=25%  Similarity=0.303  Sum_probs=40.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||++.|++++
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  212 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT  212 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh
Confidence            44579999999999999999999999999999999999999844

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.31  E-value=0.00063  Score=60.51  Aligned_cols=46  Identities=17%  Similarity=0.047  Sum_probs=33.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||+++|++.+..
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh
Confidence            3456999999999999999999999999999999999999998753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.30  E-value=0.00091  Score=58.99  Aligned_cols=46  Identities=20%  Similarity=0.238  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       144 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  189 (245)
T 1uls_A          144 GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (245)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc
Confidence            3457999999999999999999999999999999999999998764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.30  E-value=0.00037  Score=58.60  Aligned_cols=78  Identities=12%  Similarity=-0.009  Sum_probs=56.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++.++.++|.| .|.+|..+++.|.+. |++|+++++++++.+.    +.+.    .+..+..|.++++.++++     .
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~----~~~~----g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ----HRSE----GRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH----HHHT----TCCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH----HHHC----CCCEEEcCCCCHHHHHhc-----c
Confidence            46677788888 599999999999999 9999999999765544    2221    244567899887654422     0


Q ss_pred             hCCCccEEEECCC
Q psy2854         132 QYPKIHVLINNAG  144 (384)
Q Consensus       132 ~~g~id~lvnnAG  144 (384)
                      ...+.|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1346899998765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.30  E-value=0.00058  Score=60.91  Aligned_cols=46  Identities=22%  Similarity=0.108  Sum_probs=35.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.+.||+|++++||+++|++.+..
T Consensus       175 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL  220 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc
Confidence            4457999999999999999999999999999999999999998754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.29  E-value=0.00058  Score=61.42  Aligned_cols=45  Identities=27%  Similarity=0.315  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||++.|++.+.
T Consensus       174 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (273)
T 3uf0_A          174 NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAA  218 (273)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh
Confidence            445799999999999999999999999999999999999998764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.29  E-value=0.00096  Score=60.35  Aligned_cols=44  Identities=14%  Similarity=0.104  Sum_probs=40.2

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecC-ceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPG-WCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg-~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.|++++.++||+||+|+|| .+.|++.+.
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~  207 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN  207 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh
Confidence            35799999999999999999999999999999999 699988664

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.28  E-value=0.00043  Score=61.64  Aligned_cols=45  Identities=16%  Similarity=0.231  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||++.|++.+.
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  195 (259)
T 4e6p_A          151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG  195 (259)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh
Confidence            345799999999999999999999999999999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.27  E-value=0.00048  Score=61.97  Aligned_cols=44  Identities=16%  Similarity=0.206  Sum_probs=36.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecC-ceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPG-WCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg-~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++.++||+||+|+|| .+.|++.+.
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~  205 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM  205 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh
Confidence            34699999999999999999999999999999999 699998754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.27  E-value=0.0006  Score=60.33  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=35.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+
T Consensus       150 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          150 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            34579999999999999999999999999999999999999876

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.27  E-value=0.00065  Score=60.43  Aligned_cols=45  Identities=13%  Similarity=0.052  Sum_probs=39.6

Q ss_pred             CCccccccccccccchHHHHHHhh-cCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYA-DKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~-~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++. ++||+||+|+||++.|++.+.
T Consensus       152 ~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          152 GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence            445799999999999999999997 679999999999999997553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.27  E-value=4.9e-05  Score=67.81  Aligned_cols=45  Identities=22%  Similarity=0.183  Sum_probs=39.8

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ..|+.||.+...+++.+++++.++||+||+|+||+++|++.+..+
T Consensus       161 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  205 (257)
T 3tl3_A          161 AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP  205 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc
Confidence            469999999999999999999999999999999999999988654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.26  E-value=0.00016  Score=65.63  Aligned_cols=44  Identities=23%  Similarity=0.365  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++...||+||+|+||+++|++.+
T Consensus       184 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          184 TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            44579999999999999999999999999999999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.26  E-value=0.00052  Score=61.05  Aligned_cols=45  Identities=22%  Similarity=0.233  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+++||++.|++.+.
T Consensus       150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          150 ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence            345799999999999999999999999999999999999998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.25  E-value=0.00026  Score=63.53  Aligned_cols=44  Identities=30%  Similarity=0.278  Sum_probs=36.0

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.+++++...||+|++++||+++|++.+.
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            34699999999999999999999999999999999999998765

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.24  E-value=0.00038  Score=62.49  Aligned_cols=46  Identities=17%  Similarity=0.161  Sum_probs=38.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++...||+|++++||+++|++.+..
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh
Confidence            4467999999999999999999999999999999999999998764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.24  E-value=0.00064  Score=60.35  Aligned_cols=45  Identities=11%  Similarity=0.213  Sum_probs=41.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCce---------ecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWC---------YTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~---------~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++         +|++.+.
T Consensus       141 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~  194 (254)
T 1zmt_A          141 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT  194 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc
Confidence            44579999999999999999999999999999999999         8888765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.24  E-value=0.00034  Score=63.60  Aligned_cols=45  Identities=27%  Similarity=0.270  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||++.|++.+.
T Consensus       192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence            445799999999999999999999999999999999999998654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.23  E-value=0.00071  Score=60.23  Aligned_cols=45  Identities=29%  Similarity=0.497  Sum_probs=37.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (260)
T 1x1t_A          151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH
Confidence            445799999999999999999999999999999999999998764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.23  E-value=0.00053  Score=61.10  Aligned_cols=46  Identities=17%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+|++++||++.|++.+..
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  202 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT  202 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc
Confidence            3457999999999999999999999999999999999999998764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.22  E-value=0.00076  Score=60.22  Aligned_cols=46  Identities=20%  Similarity=0.208  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++.+. |+||+++||+++|++.+..+
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~  216 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP  216 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC
Confidence            34579999999999999999999877 99999999999999988754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.22  E-value=0.00048  Score=60.14  Aligned_cols=46  Identities=20%  Similarity=0.307  Sum_probs=35.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+..
T Consensus       139 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  184 (230)
T 3guy_A          139 QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS  184 (230)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc
Confidence            4457999999999999999999999999999999999999998764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.21  E-value=0.00059  Score=60.54  Aligned_cols=44  Identities=23%  Similarity=0.200  Sum_probs=39.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++... |+||+|+||+++|++.+.
T Consensus       161 ~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~  204 (252)
T 3f1l_A          161 NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRAS  204 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhh
Confidence            44579999999999999999999877 999999999999998653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.21  E-value=0.00049  Score=62.83  Aligned_cols=45  Identities=22%  Similarity=0.242  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||.|++|+||+++|++.++
T Consensus       177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          177 GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc
Confidence            345799999999999999999999999999999999999999775

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.20  E-value=0.00069  Score=60.63  Aligned_cols=44  Identities=20%  Similarity=0.298  Sum_probs=32.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.+++++ . ||+||+|+||+++|++.+..
T Consensus       149 ~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          149 TAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------
T ss_pred             CChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccc
Confidence            44579999999999999999997 4 99999999999999998754

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.19  E-value=0.00079  Score=63.21  Aligned_cols=78  Identities=14%  Similarity=0.110  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+| +|++|...++.+...|++|++++++.++.+.. +++     +...   ..| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADH---GIN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE---EEE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCE---EEc-CCcccHHHHHHHHhC-CC
Confidence            578999999 89999999999989999999999987665542 222     2221   235 443333333333322 12


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|++++++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            7999999998

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.17  E-value=0.0011  Score=59.26  Aligned_cols=45  Identities=13%  Similarity=-0.086  Sum_probs=40.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+.
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA  201 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhc
Confidence            345699999999999999999999999999999999999998654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.17  E-value=0.0013  Score=58.96  Aligned_cols=45  Identities=27%  Similarity=0.381  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.+.||+||+|+||++.|++.+.
T Consensus       168 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          168 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc
Confidence            345799999999999999999999999999999999999998764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.17  E-value=0.00093  Score=60.64  Aligned_cols=43  Identities=19%  Similarity=0.010  Sum_probs=40.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++..+||+||+|+||+++|++ +
T Consensus       193 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          193 GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence            445799999999999999999999999999999999999999 5

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.17  E-value=0.00076  Score=62.11  Aligned_cols=46  Identities=20%  Similarity=0.335  Sum_probs=36.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.++.++.+.||.|++|+||+|+|++.+..
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence            3457999999999999999999999999999999999999998753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.16  E-value=0.00075  Score=61.98  Aligned_cols=42  Identities=14%  Similarity=-0.002  Sum_probs=39.2

Q ss_pred             cccccccccccchHHHHHHhhc-CCceEEEeecCceecccccc
Q psy2854         309 AYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       309 ~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~  350 (384)
                      .|+.||.+...+++.|++++.. +||+||+|+||+++|++.+.
T Consensus       192 ~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          192 GMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence            6999999999999999999985 89999999999999998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.16  E-value=0.00067  Score=59.82  Aligned_cols=43  Identities=12%  Similarity=0.220  Sum_probs=40.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLF  348 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~  348 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          143 YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            3457999999999999999999999999999999999999997

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.15  E-value=0.004  Score=53.87  Aligned_cols=45  Identities=13%  Similarity=0.088  Sum_probs=40.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+++++..  |+||+++||+++|++.+...
T Consensus       126 ~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          126 NTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence            4457999999999999999999976  99999999999999988764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00037  Score=64.38  Aligned_cols=75  Identities=16%  Similarity=0.124  Sum_probs=49.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      +++|+||+||+|...++.+...|++|+++++++++.+... +    . +...   .+|.++.+  .+.++++  ..+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~----l-Ga~~---~i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V----L-GAKE---VLAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H----T-TCSE---EEECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H----c-CCcE---EEecCCcH--HHHHHHh--cCCccc
Confidence            7999999999999999998899999999999877655432 2    2 2221   23554432  2222222  124799


Q ss_pred             EEEECCCC
Q psy2854         138 VLINNAGV  145 (384)
Q Consensus       138 ~lvnnAG~  145 (384)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.15  E-value=0.0015  Score=61.26  Aligned_cols=86  Identities=16%  Similarity=0.126  Sum_probs=53.0

Q ss_pred             CC-CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCH--HHHHHHHHHHHH
Q psy2854          55 EG-KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF--DSIKNFAKNVMK  131 (384)
Q Consensus        55 ~~-k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~--~~v~~~~~~i~~  131 (384)
                      .| ++|+|+||+|++|...++.+...|++|++++++.++..+..+.+++ . +... +  .|..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-l-Ga~~-v--i~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-L-GATQ-V--ITEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-H-TCSE-E--EEHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-c-CCeE-E--EecCccchHHHHHHHHHHhh
Confidence            47 8999999999999999888888899999998876653333333332 2 2221 1  232220  122222222210


Q ss_pred             -hCCCccEEEECCCC
Q psy2854         132 -QYPKIHVLINNAGV  145 (384)
Q Consensus       132 -~~g~id~lvnnAG~  145 (384)
                       ..+++|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             23479999999984

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.13  E-value=0.0011  Score=60.24  Aligned_cols=44  Identities=9%  Similarity=-0.038  Sum_probs=40.5

Q ss_pred             ccccccccccccchHHHHHHhhc-CCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.+++++.. +||+||+|+||+++|++.+..
T Consensus       190 ~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~  234 (297)
T 1d7o_A          190 GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc
Confidence            47999999999999999999984 899999999999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.13  E-value=0.0014  Score=58.44  Aligned_cols=45  Identities=20%  Similarity=0.163  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      +...|+.||.+...+++.+++++.++||+||+|+||++.|++.+.
T Consensus       166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence            445799999999999999999999999999999999999998764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.13  E-value=0.00087  Score=60.09  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=39.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+++++.. +|+||+|+||++.|++.+.
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhh
Confidence            4457999999999999999999977 8999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-34
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-34
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-04
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-33
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	0.003
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	8e-32
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	0.002
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-30
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-30
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-30
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-30
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-06
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-29
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-29
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-28
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-28
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-28
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	0.002
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-28
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-28
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	7e-28
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-27
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	0.002
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-27
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-27
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-04
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-26
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.001
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-25
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	0.003
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-25
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-05
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-25
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	0.001
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-24
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-05
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-24
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-05
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-24
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-24
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-24
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.002
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-24
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-23
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-05
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-23
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-04
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-23
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-22
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-22
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	6e-22
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-21
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-20
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-20
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-20
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-20
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-18
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-18
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-17
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-17
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-17
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	3e-17
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	0.004
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-17
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-15
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-14
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-13
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-12
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-11
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-11
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-11
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	6e-10
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-06
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-06

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 1e-34
 Identities = 40/224 (17%), Positives = 90/224 (40%), Gaps = 9/224 (4%)

Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
           A P  +    ++ ++TGA+ GIG   A+ L +    VV   R++   +E   + K     
Sbjct: 1   ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 60

Query: 107 GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGIN 166
           G ++    +L++ + I +    +  Q+  + + INNAG++ P      +  G++  F +N
Sbjct: 61  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVN 120

Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK--LM 224
            +   + T    + +++  +    +++  ++     +G +           Y  +K  + 
Sbjct: 121 VLALSICTREAYQSMKERNVDDGHIININSM-----SGHRVLPLSVTH--FYSATKYAVT 173

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
               G    L+ A   +  + + PG   T        K  +K  
Sbjct: 174 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA 217

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 4e-34
 Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 35/239 (14%)

Query: 57  KVCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
            V ++TG N GIG    ++L +L    VVL  R + RGQ A+++L+ E         +L+
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLD 61

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTN 175
           +    SI+     + K+Y  + VL+NNAG++  + +        EV    N  G   +  
Sbjct: 62  IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 176 LLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFV----------------------- 209
            L+  I+    VV V S +  R          +K                          
Sbjct: 122 ELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 210 --QKGHSNPAYCNSK----LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
             ++G  + AY  +K    +++     +L  +     + ++  CPGW  T++      K
Sbjct: 182 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATK 240

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 290 DFDNLNGEKGFVQKGHSNPAYCNSK----LMNYYFGAELYLKYADKGVDVCVVCPGWCYT 345
            F     +    ++G  + AY  +K    +++     +L  +     + +   CPGW  T
Sbjct: 172 KFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT 231

Query: 346 NLFRHADIK 354
           ++      K
Sbjct: 232 DMAGPKATK 240

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 6e-33
 Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 26/220 (11%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           K + G++ +ITGA  GIG  TA E AKLK+ +VL   +    +E   K K      ++  
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHT 60

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
             ++ ++ + I + AK V  +   + +L+NNAGV        T     E  F +N + HF
Sbjct: 61  FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120

Query: 172 LLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
             T   +  + K     +V V S+                          AYC+SK    
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL----------------LAYCSSKFAAV 164

Query: 227 YFGAEL---YLKYADKGVDVSVVCPGWCYTNLFRHADIKF 263
            F   L          GV  + +CP +  T   ++     
Sbjct: 165 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL 204

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 3/51 (5%)

Query: 308 PAYCNSKLMNYYFGAEL---YLKYADKGVDVCVVCPGWCYTNLFRHADIKF 355
            AYC+SK     F   L          GV    +CP +  T   ++     
Sbjct: 154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL 204

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  118 bits (298), Expect = 8e-32
 Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 24/216 (11%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME 113
             KV IITG+++GIG  TA   A+  A V +  R   R +E  +++    V +  +  + 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLT----TKEGYEVHFGINHVG 169
            ++ +           + ++ K+ +L+NNAG ++P  +  T    + E Y+    +N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 170 HFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN 225
              LT   +  +     ++V + S            L+    F       P Y  +K   
Sbjct: 124 VIALTKKAVPHLSSTKGEIVNISSIAS--------GLHATPDF-------PYYSIAKAAI 168

Query: 226 YYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
             +     +     G+ V+ + PG   T       +
Sbjct: 169 DQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGM 204

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 18/122 (14%), Positives = 32/122 (26%), Gaps = 10/122 (8%)

Query: 240 GVDVSVVCPGWCY----TNLFRHADIKFYQKVM----IFPIAMMVVIVGSSLMDRGTIDF 291
            +D+ V   G       +       I+ Y   +       IA+    V      +G I  
Sbjct: 85  KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVN 144

Query: 292 DNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
            +              P Y  +K     +     +     G+ V  + PG   T      
Sbjct: 145 ISSIASGLHATPDF--PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 202

Query: 352 DI 353
            +
Sbjct: 203 GM 204

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  117 bits (293), Expect = 2e-31
 Identities = 50/216 (23%), Positives = 76/216 (35%), Gaps = 13/216 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           M     ++TGAN GIG    ++L K K    +   +  R  E   +LK   +D ++ ++ 
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA--RDVEKATELKSI-KDSRVHVLP 57

Query: 114 LNLASFDSIKNFAKNVMKQY--PKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGH 170
           L +    S+  F   V +      + +LINNAGV +         +        +N    
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN-------GEKGFVQKGHSNPAYCNSKL 223
            LLT  L+  ++      S      +               +           AY  SK 
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
               FG  L +   D  V V   CPGW  TNL    
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN 213

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 17/50 (34%), Positives = 18/50 (36%)

Query: 302 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
                  AY  SK     FG  L +   D  V V   CPGW  TNL    
Sbjct: 164 SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN 213

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  114 bits (286), Expect = 3e-30
 Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 15/206 (7%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K+ +ITG  +GIG   A+  A   A + +            E   +     +++ ++
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADL---VPAPEAEAAIRN-LGRRVLTVK 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +++    ++ F K V+  + +  +L+NNAG+   I     T E ++  F IN    FL+
Sbjct: 59  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLM 118

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
               +  +++           G     NL     +++       Y ++K  N  F   L 
Sbjct: 119 AKAFVPGMKR----------NGWGRIINLTSTTYWLKIEA-YTHYISTKAANIGFTRALA 167

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHA 259
                 G+ V+ + P    T     +
Sbjct: 168 SDLGKDGITVNAIAPSLVRTATTEAS 193

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 4e-30
 Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 14/206 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV ++TGA  GIG   A+ L    A V L   ++  G +    L ++ +  + + ++ 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++A    +++  + V+  + ++ +L+NNAGV+            +E    IN V     T
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN--------WEKTLQINLVSVISGT 113

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
            L ++ + K       ++    I+  +L G                  ++ +   A L  
Sbjct: 114 YLGLDYMSKQNGGEGGII----INMSSLAGLMPV--AQQPVYCASKHGIVGFTRSAALAA 167

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHAD 260
              + GV ++ +CPG+  T +    +
Sbjct: 168 NLMNSGVRLNAICPGFVNTAILESIE 193

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  114 bits (286), Expect = 4e-30
 Identities = 42/222 (18%), Positives = 74/222 (33%), Gaps = 14/222 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K  ++TG   GIG+   +E A   A +    R+     E L K +K+    Q+    
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSV 63

Query: 114 LNLASFDSIKNFAKNVMKQYP-KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            + +     +   + V   +  K+ +LINN G          T E +  H   N    + 
Sbjct: 64  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 123

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           L+ L    ++         M                V        Y  +K         L
Sbjct: 124 LSQLAHPLLKASGCGNIIFM-----------SSIAGVVSASVGSIYSATKGALNQLARNL 172

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAM 274
             ++A  G+  + V P    T L        ++KV+I    +
Sbjct: 173 ACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL 214

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  113 bits (283), Expect = 9e-30
 Identities = 43/223 (19%), Positives = 70/223 (31%), Gaps = 18/223 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  K  I   A  GIG +T++EL K      +     +    AL +LK       I    
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR-VENPTALAELKAINPKVNITFHT 61

Query: 114 LNLA-SFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            ++       K   K +  Q   + +LIN AG+              E    IN  G   
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI--------LDDHQIERTIAINFTGLVN 113

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
            T  +++   K       ++     +  ++ G        H  P Y  SK     F   L
Sbjct: 114 TTTAILDFWDKRKGGPGGII----ANICSVTGFNAI----HQVPVYSASKAAVVSFTNSL 165

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMM 275
                  GV    + PG   T L    +     +  +  + + 
Sbjct: 166 AKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS 208

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 5/130 (3%)

Query: 239 KGVDVSVVCPGWCYTNLFRHA-DIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGE 297
           K VD+ +   G    +       I F   V      +               +  ++ G 
Sbjct: 83  KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142

Query: 298 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQ 357
                  H  P Y  SK     F   L       GV    + PG   T L    +     
Sbjct: 143 NAI----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV 198

Query: 358 KVMIFPIAMM 367
           +  +  + + 
Sbjct: 199 EPRVAELLLS 208

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  111 bits (278), Expect = 5e-29
 Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 23/226 (10%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TG  SG+G E  K L    A V     +    + A ++L  E+   + + + 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN----EAAGQQLAAEL-GERSMFVR 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +++S          V ++   ++VL+NNAG+ +P   +    E +     IN    F+ 
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 174 TNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
               I  +++    ++ + S                     + ++  +   + +      
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLP--------------IEQYAGYSASKAAVSALTRA 164

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMM 275
           A L  +     + V+ + P   YT + + +  K   K M+     +
Sbjct: 165 AALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL 210

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  111 bits (278), Expect = 6e-29
 Identities = 55/218 (25%), Positives = 86/218 (39%), Gaps = 12/218 (5%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             K  I+TG N GIG    + +A   A V +  RS     E  EK+ KE    +    + 
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE-FGVKTKAYQC 66

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++++ D +    + +      I  LI NAGVSV       T E +   + +N  G F   
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126

Query: 175 NLLIERIQKV----VIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
             + +   +      IV +S M    I+  +LNG    V        Y +SK        
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV-------FYNSSKAACSNLVK 179

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
            L  ++A  G+ V+ + PG+  T+   H D K      
Sbjct: 180 GLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA 217

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  110 bits (276), Expect = 1e-28
 Identities = 42/210 (20%), Positives = 66/210 (31%), Gaps = 29/210 (13%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK  ++TG   GIG   A+  A+  A V L             + K+  +       ++
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR--------PEGKEVAEAIGGAFFQV 55

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +L        F +       ++ VL+NNA ++ P          +     +N      L+
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            L    ++K     +V V S                         N AY  SK       
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFA----------------EQENAAYNASKGGLVNLT 159

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             L L  A   + V+ V PG   T     A
Sbjct: 160 RSLALDLAPLRIRVNAVAPGAIATEAVLEA 189

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  110 bits (276), Expect = 2e-28
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 16/212 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME 113
             K  IITG+++GIG  TA   A+  A V +  RS  R +E  + + K  V + Q+  + 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKE----GYEVHFGINHVG 169
            ++ + D       + +KQ+ KI VL+NNAG ++P     T  +     Y     +N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
              +T  +   +          +   +        +  F+    +  A          + 
Sbjct: 124 VIEMTKKVKPHLVAS----KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQ-------YT 172

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
               +  A  G+ V+ V PG   T       +
Sbjct: 173 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGM 204

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 21/207 (10%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV ++TG   GIG    +      A VV+  +     +     L++E+     V +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQEL--PGAVFILC 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKE-GYEVHFGINHVGHFLL 173
           ++   D +K      ++++ ++  ++NNAG   P +    T   G+     +N +G + L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDN-LNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           T L +  ++K          +G +   + L G  G          Y  +K         L
Sbjct: 119 TKLALPYLRK---------SQGNVINISSLVGAIGQ----AQAVPYVATKGAVTAMTKAL 165

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHA 259
            L  +  GV V+ + PG  +T L+   
Sbjct: 166 ALDESPYGVRVNCISPGNIWTPLWEEL 192

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 11/47 (23%), Positives = 16/47 (34%)

Query: 305 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
                Y  +K         L L  +  GV V  + PG  +T L+   
Sbjct: 146 AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 192

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  108 bits (271), Expect = 4e-28
 Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 17/208 (8%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           KP+ GKV + TGA  GIG   A EL +  A+VV+         +A E++  E++    Q 
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG---SSSKAAEEVVAELKKLGAQG 58

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVG 169
           V ++ +++    +       +  +  +  +++N+G+ V   E   T+E ++  F +N  G
Sbjct: 59  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG 118

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
            F +    ++  ++           G I   +           H+  A   + +  +   
Sbjct: 119 QFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRA 168

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFR 257
               +    KGV V+ + PG   T++F 
Sbjct: 169 --FAVDCGAKGVTVNCIAPGGVKTDMFD 194

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  108 bits (270), Expect = 6e-28
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 14/207 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +EG   ++TG + GIGY   +ELA L A+V    R+     + L + + +    +     
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS--V 63

Query: 114 LNLASFDSIKNFAKNVMKQY-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            +L+S    +     V   +  K+++L+NNAG+ +  + K  T E Y +   IN    + 
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           L+ L    ++              +   +++G             Y  +K         L
Sbjct: 124 LSVLAHPFLKAS-------ERGNVVFISSVSGALAV----PYEAVYGATKGAMDQLTRCL 172

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHA 259
             ++A   + V+ V PG   T+L    
Sbjct: 173 AFEWAKDNIRVNGVGPGVIATSLVEMT 199

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (272), Expect = 7e-28
 Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 15/217 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD---GQIVL 111
           +G+V I+TG  +GIG    KEL +L + VV+  R + R + A ++L+  +      +++ 
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           ++ N+ + + + N  K+ +  + KI+ L+NN G       +  + +G+      N  G F
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            +         K V         G+I    +  + GF    H       ++   Y     
Sbjct: 131 YMC--------KAVYSSWMKEHGGSIVNIIVPTKAGFPLAVH----SGAARAGVYNLTKS 178

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           L L++A  G+ ++ V PG  Y+         + Q   
Sbjct: 179 LALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFF 215

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  107 bits (267), Expect = 2e-27
 Identities = 37/206 (17%), Positives = 89/206 (43%), Gaps = 11/206 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+V ++TG + G+G+  A+ LA+   +VV+  R++    EA +KL ++    + +   
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK-YGVETMAFR 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            ++++++ +K   + V +++ K+  ++N AG++     +    + +     +N  G + +
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
                  +++        +   T+                +  AY  SK         L 
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTV----------EEVTMPNISAYAASKGGVASLTKALA 171

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHA 259
            ++   G+ V+V+ PGW  T +    
Sbjct: 172 KEWGRYGIRVNVIAPGWYRTKMTEAV 197

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 3/115 (2%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKG 299
            +D  V   G    +      +  +++V+   +     +   +       D  ++     
Sbjct: 83  KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 142

Query: 300 FVQKGHSNPAYCN---SKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
              +  + P       SK         L  ++   G+ V V+ PGW  T +    
Sbjct: 143 LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV 197

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  106 bits (265), Expect = 3e-27
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 17/208 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD-GQIVLM 112
           ++GKV IITG   GIG   A +  +  A V++  R      +  EK  K V    QI   
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH----SDVGEKAAKSVGTPDQIQFF 59

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           + + +  D          K +  +  L+NNAG++V    + TT   +     +N  G F 
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
            T L I+R++   +  S       I+  ++ G  G      S  AY  SK          
Sbjct: 120 GTRLGIQRMKNKGLGAS------IINMSSIEGFVGD----PSLGAYNASKGAVRIMSKSA 169

Query: 233 YLKYA--DKGVDVSVVCPGWCYTNLFRH 258
            L  A  D  V V+ V PG+  T L   
Sbjct: 170 ALDCALKDYDVRVNTVHPGYIKTPLVDD 197

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  106 bits (266), Expect = 4e-27
 Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 14/210 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLME 113
            GK  IITG+++GIG   A   AK  A V +  R+  R +E  +++ K  V   +I  + 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
            ++       +     + ++ KI +L+NNAG ++           E Y+  F +N     
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            +T    E            + +   +  N++      Q     P Y  +K     +   
Sbjct: 123 EMTQKTKEH-----------LIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC 171

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHADI 261
             +     GV V+ V PG   T       +
Sbjct: 172 TAIDLIQHGVRVNSVSPGAVATGFMGAMGL 201

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 17/114 (14%), Positives = 28/114 (24%), Gaps = 4/114 (3%)

Query: 243 VSVVCPGWCYTNLFRHADIKFYQKVM---IFPIAMMVVIVGSSLMDRGTIDFDNLNGEKG 299
           V+                ++ YQK        +  M       L+       +  +   G
Sbjct: 89  VNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG 148

Query: 300 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADI 353
                   P Y  +K     +     +     GV V  V PG   T       +
Sbjct: 149 PQAHSGY-PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL 201

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  105 bits (262), Expect = 1e-26
 Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLM 112
           ++ KV IITG   GIG  TAK   +  A VV+   +     +  +K+   +     I  +
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA----DDHGQKVCNNIGSPDVISFV 59

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL--TTKEGYEVHFGINHVGH 170
             ++   + ++N     + ++ K+ ++  N GV       +     E ++    IN  G 
Sbjct: 60  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 119

Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGA 230
           FL+       +          +               F      +  Y  +K        
Sbjct: 120 FLVAKHAARVM----------IPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT 169

Query: 231 ELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
            L  +  + G+ V+ V P    + L    
Sbjct: 170 SLCTELGEYGIRVNCVSPYIVASPLLTDV 198

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  104 bits (260), Expect = 1e-26
 Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 16/214 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GKV +++G   G+G    + +    A VV G        E  + +  E+ D    +  L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL----DEEGKAMAAELADAARYV-HL 59

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++      K      +  +  +HVL+NNAG+      +      ++    +N  G FL  
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
             +++ +++                         +    +   Y  +K           L
Sbjct: 120 RAVVKPMKE-----------AGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL 168

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           +    G+ V+ + PG   T +        +Q  +
Sbjct: 169 ELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTAL 202

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  104 bits (261), Expect = 3e-26
 Identities = 40/209 (19%), Positives = 84/209 (40%), Gaps = 21/209 (10%)

Query: 53  PM--EGKVCIITGANSGIGYETAKELAKLKATVVLGCRS-----MIRGQEALEKLKKEVQ 105
           P+  +G+V ++TGA  G+G   A   A+  A VV+         + +G  A +K+ +E++
Sbjct: 2   PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR 61

Query: 106 DGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGI 165
                 +  N  S ++ +   K  +  + +I V++NNAG+         + E +++   +
Sbjct: 62  RRGGKAV-ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120

Query: 166 NHVGHFLLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           +  G F +T    + ++K         + G I    + +G  G          Y  +KL 
Sbjct: 121 HLRGSFQVTRAAWDHMKK--------QNYGRIIMTASASGIYG----NFGQANYSAAKLG 168

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYT 253
                  L ++     +  + + P     
Sbjct: 169 LLGLANTLVIEGRKNNIHCNTIAPNAGSR 197

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 16/112 (14%), Positives = 29/112 (25%), Gaps = 10/112 (8%)

Query: 240 GVDVSVVCPGWCYTNLFRH---ADIKFYQKVMIFPIAMMVVIVGSSLMDRGT---IDFDN 293
            +DV V   G      F      D    Q+V +     +       +  +     I   +
Sbjct: 90  RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS 149

Query: 294 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYT 345
            +G  G          Y  +KL        L ++     +    + P     
Sbjct: 150 ASGIYG----NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR 197

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (253), Expect = 1e-25
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 20/205 (9%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            G   ++TGA  GIG +T K L    A VV   R+       L  L KE    + V   +
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPV--CV 57

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +L  +D+     +  +     + +L+NNA + +       TKE ++  F +N    F ++
Sbjct: 58  DLGDWDAT----EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 113

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
            ++   +    + GS +     +                    Y ++K         + +
Sbjct: 114 QMVARDMINRGVPGSIVNVSSMVAHVTFPN----------LITYSSTKGAMTMLTKAMAM 163

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHA 259
           +     + V+ V P    T++ +  
Sbjct: 164 ELGPHKIRVNSVNPTVVLTDMGKKV 188

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 3/115 (2%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVM---IFPIAMMVVIVGSSLMDRGTIDFDNLNG 296
            VD+ V          F     + + +     +  +  +  +V   +++RG         
Sbjct: 74  PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 133

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
                    +   Y ++K         + ++     + V  V P    T++ +  
Sbjct: 134 SMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV 188

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  102 bits (254), Expect = 1e-25
 Identities = 31/205 (15%), Positives = 71/205 (34%), Gaps = 10/205 (4%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
             +V +ITG  SG+G  TA  LA   A + L   S    + +   + +   D +++    
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +++    ++ +     +++ +I    NNAG+        +            ++    L 
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 122

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
              + +I +    G  +            G +G   +     A      +      E   
Sbjct: 123 LEKVLKIMREQGSGMVVNTASV------GGIRGIGNQSGYAAAKHGVVGLTRNSAVEY-- 174

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHA 259
                G+ ++ + PG  +T +  ++
Sbjct: 175 --GRYGIRINAIAPGAIWTPMVENS 197

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  102 bits (254), Expect = 1e-25
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 15/211 (7%)

Query: 51  YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQ 108
           YK +EGKV +ITG+++G+G   A   A  KA VV+  RS    ++    + +E++   G+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGE 58

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
            + ++ ++     + N  ++ +K++ K+ V+INNAG+  P+     +   +      N  
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           G FL +   I+   +  I G+ +                          Y  SK      
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSS----------VHEKIPWPLFVHYAASKGGMKLM 168

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
              L L+YA KG+ V+ + PG   T +    
Sbjct: 169 TETLALEYAPKGIRVNNIGPGAINTPINAEK 199

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  101 bits (252), Expect = 2e-25
 Identities = 43/214 (20%), Positives = 76/214 (35%), Gaps = 16/214 (7%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK  IITG   G+G E A++     A VVL         E      +E+         L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVL----DEEGAATARELG-DAARYQHL 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++   +  +       +++  +  L+NNAG+S  +  +  + E +     IN  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
             +I            + D G     N++   G +       +Y  SK           +
Sbjct: 119 KTVIPA----------MKDAGGGSIVNISSAAGLMG-LALTSSYGASKWGVRGLSKLAAV 167

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           +     + V+ V PG  YT +     I+  +   
Sbjct: 168 ELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY 201

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVM-IFPIAMMVVI--VGSSLMDRGTIDFDNLNG 296
            VD  V   G           ++ ++KV+ I    + + +  V  ++ D G     N++ 
Sbjct: 79  SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISS 138

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFY 356
             G +       +Y  SK           ++     + V  V PG  YT +     I+  
Sbjct: 139 AAGLMG-LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG 197

Query: 357 QKVM 360
           +   
Sbjct: 198 EGNY 201

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  101 bits (253), Expect = 2e-25
 Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 19/244 (7%)

Query: 47  ASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD 106
             P    +EGKV ++TGA  GIG E A EL +    V++         E+ E++   ++ 
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA---NSTESAEEVVAAIKK 65

Query: 107 --GQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFG 164
                  ++ N+   + I    +  +K + K+ ++ +N+GV      K  T E ++  F 
Sbjct: 66  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 125

Query: 165 INHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           IN  G F +     + ++           R  +         G  +    +  Y  SK  
Sbjct: 126 INTRGQFFVAREAYKHLEI--------GGRLILMGSIT----GQAKAVPKHAVYSGSKGA 173

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH--ADIKFYQKVMIFPIAMMVVIVGSS 282
              F   + +  ADK + V+VV PG   T+++     +     + +          V  S
Sbjct: 174 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 233

Query: 283 LMDR 286
            + R
Sbjct: 234 PLRR 237

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 1/136 (0%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVM-IFPIAMMVVIVGSSLMDRGTIDFDNLNGEK 298
            +D+     G       +    + + +V  I       V   +            +    
Sbjct: 96  KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 155

Query: 299 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQK 358
           G  +    +  Y  SK     F   + +  ADK + V VV PG   T+++     ++   
Sbjct: 156 GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPN 215

Query: 359 VMIFPIAMMYMRSANQ 374
                   +   +A Q
Sbjct: 216 GENLSNEEVDEYAAVQ 231

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 98.9 bits (246), Expect = 1e-24
 Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 27/219 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++ K  +ITGA  GIG  T +  AK  A +V         +  L +  + V    +V   
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE----EGPLREAAEAVGAHPVV--- 55

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           +++A   S++      +    ++  +++ AG++          E +E+   +N  G FL+
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 174 TNL----LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
                  + E+    +++ +S +  G                      Y  S        
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGN----------------LGQANYAASMAGVVGLT 159

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
             L L+    G+ V+ + PG+  T +      K  +K +
Sbjct: 160 RTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAI 198

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKG 299
            +D  V   G    N      ++ ++ V+   +    ++  ++       +  ++     
Sbjct: 77  RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS 136

Query: 300 FVQKGHSN-PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFYQK 358
            V  G+     Y  S          L L+    G+ V  + PG+  T +      K  +K
Sbjct: 137 RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK 196

Query: 359 VM 360
            +
Sbjct: 197 AI 198

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 98.3 bits (244), Expect = 3e-24
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 11/213 (5%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GKV ++TG+ SGIG   A  LA   A +VL         E +          +++   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            +L+  ++++    N ++Q  +I +L+NNAG+      +    E ++    +N    F  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
           T   +  ++K          +G     N+    G V    +  AY  +K     F     
Sbjct: 122 TAAALPHMKK----------QGFGRIINIASAHGLVAS-ANKSAYVAAKHGVVGFTKVTA 170

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADIKFYQK 266
           L+ A +G+  + +CPGW  T L         +K
Sbjct: 171 LETAGQGITANAICPGWVRTPLVEKQISALAEK 203

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 4/122 (3%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVMI---FPIAMMVVIVGSSLMDRGTIDFDNLNG 296
            +D+ V   G  +T L      + +  ++      +          +  +G     N+  
Sbjct: 83  RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIAS 142

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKFY 356
             G V    +  AY  +K     F     L+ A +G+    +CPGW  T L         
Sbjct: 143 AHGLVAS-ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALA 201

Query: 357 QK 358
           +K
Sbjct: 202 EK 203

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 98.2 bits (244), Expect = 3e-24
 Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 18/222 (8%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLM 112
           +GK  IITGA +GIG E A   A   A+VV+   +     +A   +  E+Q   GQ    
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFAC 65

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
             ++ S   +   A   + +  K+ +L+NNAG   P    +   +    +          
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYE--------- 116

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
             N+        ++      + G +     +          ++ A   +   +      +
Sbjct: 117 -LNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH--LVRNM 173

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAM 274
                +K + V+ + PG   T+  +       ++ M+    +
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI 215

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.7 bits (245), Expect = 3e-24
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 19/247 (7%)

Query: 51  YKP--MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ 108
           ++P  ++GK  I+TGA+ GIG E A  LAK+ A VV+  RS    Q+ +    +      
Sbjct: 7   FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAAS 65

Query: 109 IVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHV 168
              +   +      + F     K    + +LI N   +  +               +N +
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFL 125

Query: 169 GHFLLTNLLIERIQKVVIVGSSLMDRGTIDF-DNLNGEKGFVQKGHSNPAYCNSKLMNYY 227
            + +LT   +  +++           G+I    +L G+  +        AY  SK     
Sbjct: 126 SYVVLTVAALPMLKQ---------SNGSIVVVSSLAGKVAY----PMVAAYSASKFALDG 172

Query: 228 FGAELYLKYADKGVDVSV--VCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMD 285
           F + +  +Y+   V+VS+     G   T     A                + I+    + 
Sbjct: 173 FFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALR 232

Query: 286 RGTIDFD 292
           +  + +D
Sbjct: 233 QEEVYYD 239

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 3e-24
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 28/210 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           + G+  ++TGA  GIG  T + L    A VV   R+    Q  L+ L +E     I  + 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT----QADLDSLVREC--PGIEPVC 58

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
           ++L  +++     +  +     + +L+NNA V++       TKE ++  F +N      +
Sbjct: 59  VDLGDWEAT----ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 174 TNLLI----ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           + ++      R     IV  S                   +   ++  YC++K       
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQ--------------CSQRAVTNHSVYCSTKGALDMLT 160

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             + L+     + V+ V P    T++ +  
Sbjct: 161 KVMALELGPHKIRVNAVNPTVVMTSMGQAT 190

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 3/115 (2%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVM---IFPIAMMVVIVGSSLMDRGTIDFDNLNG 296
            VD+ V          F     + + +     +  +  +  IV   L+ RG         
Sbjct: 76  PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
            +   +   ++  YC++K         + L+     + V  V P    T++ +  
Sbjct: 136 SQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT 190

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 98.2 bits (244), Expect = 3e-24
 Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 20/201 (9%)

Query: 60  IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASF 119
           I+T      G  +A  L++   TV     S         K K E++       +L   S 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDES--------FKQKDELEAFAETYPQLKPMSE 55

Query: 120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKL-TTKEGYEVHFGINHVGHFLLTNLLI 178
                  + V   Y ++ VL++N   +   +       E Y        +  F L N + 
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 179 ERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD 238
            +++K        +   T                     Y +++         L  +  +
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPW-----------KELSTYTSARAGACTLANALSKELGE 164

Query: 239 KGVDVSVVCPGWCYTNLFRHA 259
             + V  + P + ++    + 
Sbjct: 165 YNIPVFAIGPNYLHSEDSPYF 185

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 96.7 bits (240), Expect = 1e-23
 Identities = 52/233 (22%), Positives = 83/233 (35%), Gaps = 15/233 (6%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLME 113
            +V ++TGA SGIG E A+ L K    V +  R     +E L    KE+++   +     
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRT 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
            ++ S   I+     V+++Y  + VL+NNAG            E +      N  G F +
Sbjct: 58  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 117

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
           T  +++            M              G  Q       Y  SK     F   L 
Sbjct: 118 TKQVLKAGG---------MLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 168

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDR 286
           L+ A  G+ V+ VCPG+  T +       +     +        I     + R
Sbjct: 169 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR 221

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 23/132 (17%), Positives = 36/132 (27%), Gaps = 4/132 (3%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVMI----FPIAMMVVIVGSSLMDRGTIDFDNLN 295
            VDV V   G            + +  V+         +   ++ +  M           
Sbjct: 79  PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNI 138

Query: 296 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKF 355
              G  Q       Y  SK     F   L L+ A  G+ V  VCPG+  T +       +
Sbjct: 139 ASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY 198

Query: 356 YQKVMIFPIAMM 367
                +      
Sbjct: 199 SDIWEVSTEEAF 210

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 96.0 bits (238), Expect = 2e-23
 Identities = 45/232 (19%), Positives = 80/232 (34%), Gaps = 15/232 (6%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GK  +ITG+  GIG   A+   +  A V +   +     EA      E+       + L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADIN----LEAARATAAEI-GPAACAIAL 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           ++    SI      ++ ++  I +L+NNA +         T+E Y+  F IN  G   + 
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
             +   +               I+  +  G +G    G     YC +K           L
Sbjct: 119 QAVARAMIA------GGRGGKIINMASQAGRRGEALVGV----YCATKAAVISLTQSAGL 168

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDR 286
                G++V+ + PG      +   D KF     +        +  +    R
Sbjct: 169 NLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGR 220

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 39.0 bits (90), Expect = 5e-04
 Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 3/119 (2%)

Query: 240 GVDVSVVCPGWCYTNLFRHADIKFYQKVM---IFPIAMMVVIVGSSLMDRGTIDFDNLNG 296
            +D+ V                + Y ++    +     M+  V  +++  G         
Sbjct: 79  SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMA 138

Query: 297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHADIKF 355
            +   +       YC +K           L     G++V  + PG      +   D KF
Sbjct: 139 SQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKF 197

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 95.2 bits (236), Expect = 3e-23
 Identities = 51/228 (22%), Positives = 85/228 (37%), Gaps = 19/228 (8%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMI---RGQEALEKLKKEVQD--GQIVL 111
            + +ITGA  GIG   A E A+           ++   R    LEK+  E +        
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
           +  +++    ++    +++++Y  I  L+NNAGV         T+E ++     N  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            LT  L   +++      S               +           YC SK         
Sbjct: 122 FLTQALFALMER----QHSGHIFFITSVAATKAFRHS-------SIYCMSKFGQRGLVET 170

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFP--IAMMVV 277
           + L      V ++ V PG  YT ++   D +  Q +M+ P  IA  VV
Sbjct: 171 MRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-QALMMMPEDIAAPVV 217

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 92.5 bits (229), Expect = 3e-22
 Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 19/214 (8%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
            GK  ++TGA SGIG       A+  A++V   R      EA+  L+      + + +  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-----AEAIAVVA 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +++   +++      ++++ ++H + + AGV+          E +E    +N  G FL+ 
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
               E +++   +  +    G                      Y   KL        L L
Sbjct: 119 RKAGEVLEEGGSLVLTGSVAGLGA--------------FGLAHYAAGKLGVVGLARTLAL 164

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
           + A KGV V+V+ PG   T +        +++ +
Sbjct: 165 ELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEV 198

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 3e-22
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 22/228 (9%)

Query: 37  FKSRSWSKLKASPFYKPM------EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM 90
            +S+ +S     P  K M      +GKV  ITG  +G+G      L+ L A  V+  R M
Sbjct: 5   LQSKFFS-----PLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 59

Query: 91  IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK 150
              +   E++  +    ++  ++ ++   D ++N    ++K     +++INNA  +    
Sbjct: 60  DVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP 118

Query: 151 EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQ 210
            +  +   ++    I   G   +T  + +++          +                  
Sbjct: 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQL----------IKAQKGAAFLSITTIYAET 168

Query: 211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH 258
                    ++K         L  ++   G+  +V+ PG   T     
Sbjct: 169 GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 216

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.8 bits (227), Expect = 6e-22
 Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMIRGQEALEKLKKEVQDGQIV 110
           +   VC++TGA+ G G   A +LA+L    + +++  RS    ++  E+L  +  D ++V
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 111 LMELNLASFDSIKN----FAKNVMKQYPKIHVLINNAGVSVPIKEKL---TTKEGYEVHF 163
           L   +L +   ++       +    +  +  +LINNA     + +             ++
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 164 GINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKL 223
            +N      LT+  +   Q    +  ++++  ++          +   G          +
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-----PYKGWGLYCAGKAARDM 178

Query: 224 MNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
           +     AE         V V    PG    ++ + A
Sbjct: 179 LYQVLAAEEP------SVRVLSYAPGPLDNDMQQLA 208

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 89.9 bits (222), Expect = 3e-21
 Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
           KV ++TGA  GIG   A  L K    V +   +        + +  E+    G  V +++
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN----DATAKAVASEINQAGGHAVAVKV 57

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +++  D +    +   K      V++NNAGV+     +  T E  +  + IN  G     
Sbjct: 58  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGI 117

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
              +E  +K         +       N   + G V        Y +SK            
Sbjct: 118 QAAVEAFKK---------EGHGGKIINACSQAGHVGNPELA-VYSSSKFAVRGLTQTAAR 167

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDR 286
             A  G+ V+  CPG   T ++   D +  +                  + R
Sbjct: 168 DLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR 219

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 88.6 bits (219), Expect = 1e-20
 Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G+  +ITG  SG+G           A V +  +S     E L +L+ +     ++ + 
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS----AERLAELETD-HGDNVLGIV 57

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP-----IKEKLTTKEGYEVHFGINHV 168
            ++ S +  K  A   + ++ KI  LI NAG+           + +    ++  F IN  
Sbjct: 58  GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVK 117

Query: 169 GHFLLTNLLIERIQK----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
           G+       +  +      V+   S+                         P Y  +K  
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISNAGFYPNGGG----------------PLYTAAKHA 161

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
                 EL  + A   V V+ V  G   ++L   + +    K +
Sbjct: 162 IVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAI 204

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 87.5 bits (216), Expect = 2e-20
 Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 26/219 (11%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQIVLMEL 114
            V ++TGA+ GIG   A  L K    V++      R  +A E++ K+++   GQ +    
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA---RSAKAAEEVSKQIEAYGGQAITFGG 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           +++    ++   K  +  +  I V++NNAG++         K  ++    +N  G FL T
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
               + + K     ++ + S +   G I                    Y  +K     F 
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQ----------------ANYAAAKAGVIGFS 162

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
                + A + ++V+VVCPG+  +++         +K++
Sbjct: 163 KTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKIL 201

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.0 bits (215), Expect = 2e-20
 Identities = 42/226 (18%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 50  FYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--G 107
           +Y   E KV ++TGA  GIG E AK LAK  + V+   R+    Q++ + +  E++    
Sbjct: 4   YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT----QKSCDSVVDEIKSFGY 59

Query: 108 QIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINH 167
           +      +++  + I      ++ ++  + +L+NNAG++          + +E     N 
Sbjct: 60  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL 119

Query: 168 VGHFLLTNLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
              F +T  + +R+       ++ + S +   G +                    Y +SK
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ----------------ANYSSSK 163

Query: 223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
                F   L  + A + + V+ + PG+  +++      +  + ++
Sbjct: 164 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNII 209

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 87.2 bits (215), Expect = 3e-20
 Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 26/223 (11%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           K   GKVC++TGA   IG  TA  LA+    + L   +    +EALEK +  V++   + 
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN----REALEKAEASVREKGVEA 56

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTT-----KEGYEVHFG 164
                ++ S +++     +V++ + KI  L NNAG                     ++  
Sbjct: 57  RSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVT 116

Query: 165 INHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
                   ++  +I +    ++  +S+            G KG      +  AY  SK  
Sbjct: 117 GAFHVLKAVSRQMITQNYGRIVNTASMA-----------GVKGP----PNMAAYGTSKGA 161

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV 267
                    L  A   + V+ + PG+          ++   KV
Sbjct: 162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKV 204

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 82.5 bits (203), Expect = 1e-18
 Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 14/205 (6%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++G   ++TG + GIGY   +ELA L A V    R+     E LE  +++  + +     
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS--V 61

Query: 114 LNLASFDSIKNFAKNVMKQYP-KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
            +L S        + V   +  K+++L+NNAGV +  + K  T++ Y +  G N    + 
Sbjct: 62  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY- 120

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
                    Q    +  +  +   I   ++ G         S   Y  SK         L
Sbjct: 121 ------HLSQIAYPLLKASQNGNVIFLSSIAGFSAL----PSVSLYSASKGAINQMTKSL 170

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFR 257
             ++A   + V+ V PG   T L  
Sbjct: 171 ACEWAKDNIRVNSVAPGVILTPLVE 195

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 81.8 bits (201), Expect = 2e-18
 Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 9/214 (4%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA 117
             +ITG    IG+  A  L +    VV+  R      + L       + G  VL + +L+
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 118 S----FDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHF 171
                 D  ++      + + +  VL+NNA      P+     T    +       V   
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAY---CNSKLMNYYF 228
             +N +                      +               P +     +K      
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK 262
                L+ A + + V+ V PG          + +
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQ 216

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 78.9 bits (194), Expect = 1e-17
 Identities = 35/221 (15%), Positives = 75/221 (33%), Gaps = 28/221 (12%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           +  K  ++  A+ GIG   A  L++  A V +  R+    +E L++         +V   
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN----EELLKRSGHRY----VVC-- 51

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
                   ++     + ++  ++ +L+ NAG          T E ++       +     
Sbjct: 52  -------DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI-- 102

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
                + ++  +           +   + +          SN A    ++    F   L 
Sbjct: 103 -----KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA----RMALTGFLKTLS 153

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIAM 274
            + A  G+ V+ V PGW  T   +    +  +K +   I M
Sbjct: 154 FEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM 194

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 78.6 bits (192), Expect = 2e-17
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 14/213 (6%)

Query: 57  KVCIITGANSGIGYETAKELAKLK---ATVVLGCRSMIRGQEALEKLKKEVQDGQIVL-M 112
              +ITG N G+G    K L  L      +   CR+    +E  ++L+   ++   +  +
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN----REQAKELEDLAKNHSNIHIL 58

Query: 113 ELNLASFDSIKNF---AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVG 169
           E++L +FD+        + V K      +  N        +      +        N V 
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 118

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP---AYCNSKLMNY 226
             +L    +  ++K      S                    +G+++    AY  SK    
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
                L +    + +    + PGW  T++   +
Sbjct: 179 AATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS 211

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 78.6 bits (193), Expect = 2e-17
 Identities = 45/216 (20%), Positives = 78/216 (36%), Gaps = 24/216 (11%)

Query: 53  PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLM 112
           P   +  ++TG N GIG   A+ LA     V +  R       A + L           +
Sbjct: 4   PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG----SGAPKGLFG---------V 50

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           E+++   D++      V +    + VL++NAG+S        T+E +E     N  G F 
Sbjct: 51  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF- 109

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
                    Q+             I   +++G  G      +   Y  SK         +
Sbjct: 110 ------RVAQRASRSMQRNKFGRMIFIGSVSGLWGI----GNQANYAASKAGVIGMARSI 159

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
             + +   V  +VV PG+  T++ R  D +  Q  +
Sbjct: 160 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGAL 195

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 3e-17
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 21/205 (10%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           +GKV I+T A  GIG   A   A+  A V+    +    +  L++L+K       VL   
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN----ESKLQELEKYPGIQTRVLD-- 58

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
                 + K        +  ++ VL N AG           ++ ++    +N    +L+ 
Sbjct: 59  -----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
              + ++             G I   N++     V+   +   Y  +K         +  
Sbjct: 114 KAFLPKMLA--------QKSGNI--INMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163

Query: 235 KYADKGVDVSVVCPGWCYTNLFRHA 259
            +  +G+  + VCPG   T   +  
Sbjct: 164 DFIQQGIRCNCVCPGTVDTPSLQER 188

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (194), Expect = 3e-17
 Identities = 37/207 (17%), Positives = 73/207 (35%), Gaps = 17/207 (8%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSM--IRGQEALEKLKKEVQD--GQIVLM 112
            V +ITG +SGIG   A  LA   +       ++  ++ Q  L +  + +    G +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 113 ELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFL 172
           +L++    S+            ++ VL+ NAG+ +    +   ++       +N VG   
Sbjct: 63  QLDVRDSKSVAAA--RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 173 LTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAEL 232
           +    +            +  RG+          G +    +   YC SK         L
Sbjct: 121 MLQAFLPD----------MKRRGSGRVLVTGSVGGLMGLPFN-DVYCASKFALEGLCESL 169

Query: 233 YLKYADKGVDVSVVCPGWCYTNLFRHA 259
            +     GV +S++  G  +T      
Sbjct: 170 AVLLLPFGVHLSLIECGPVHTAFMEKV 196

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.004
 Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 1/105 (0%)

Query: 247 CPGWCYTNLFRHADIKFYQKVMIFPIAMMVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS 306
                         +     V +     M+      +  RG+          G +    +
Sbjct: 93  LGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN 152

Query: 307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA 351
              YC SK         L +     GV + ++  G  +T      
Sbjct: 153 -DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV 196

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 4e-17
 Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 8/218 (3%)

Query: 52  KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQ-IV 110
           + ++G V +ITG  SG+G  TA+ L    A+ VL       G+   +KL          V
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 111 LMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGH 170
             E ++ +  ++       +        +   +      K +  T E ++    +N +G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 171 FLLTNLLIERIQKVVIVGSSLMDRGTI-DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
           F +  L+   + +          RG I +  ++   +G V       AY  SK       
Sbjct: 121 FNVIRLVAGEMGQNEPDQG--GQRGVIINTASVAAFEGQV----GQAAYSASKGGIVGMT 174

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV 267
             +    A  G+ V  + PG   T L      K    +
Sbjct: 175 LPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFL 212

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 76.7 bits (188), Expect = 9e-17
 Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           EGK+ ++TGA+ GIG   A+ LA   A V+    S    +   + +   +      LM L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATS----ENGAQAISDYLGANGKGLM-L 57

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
           N+    SI++  + +  ++ ++ +L+NNAG++          E +      N    F L+
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 175 NLLIERIQK-----VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
             ++  + K     ++ +GS +   G                      Y  +K     F 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMG----------------NGGQANYAAAKAGLIGFS 161

Query: 230 AELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
             L  + A +G+ V+VV PG+  T++ R         ++
Sbjct: 162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGIL 200

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.9 bits (178), Expect = 2e-15
 Identities = 23/211 (10%), Positives = 58/211 (27%), Gaps = 32/211 (15%)

Query: 55  EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
           E +  ++ G    +G    +        V                  +  +    V++++
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV------------ENEEASASVIVKM 48

Query: 115 NLASFDSIKNFAKNVMKQY--PKIHVLINNAGVSVPIKEKLTTKEG-YEVHFGINHVGHF 171
             +  +        V K     K+  ++  AG       K  +     ++ +  +     
Sbjct: 49  TDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST 108

Query: 172 LLTNLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYF 228
           + ++L  + +++   + + G+     GT         KG V              +    
Sbjct: 109 ISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVH------------QLCQSL 156

Query: 229 GAELYLKYADKGVDVSVVCPGWCYTNLFRHA 259
             +        G     V P    T + R +
Sbjct: 157 AGK--NSGMPSGAAAIAVLPVTLDTPMNRKS 185

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 69.7 bits (169), Expect = 4e-14
 Identities = 35/222 (15%), Positives = 60/222 (27%), Gaps = 26/222 (11%)

Query: 58  VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME---- 113
           V ++TGA   +G   A+ L      V L          AL       +    + ++    
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 114 -------------LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE 160
                          +  F             + +  VL+NNA    P       ++G+E
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 161 VHFGINHVGHFLLTNLL---------IERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQK 211
              G          +L          + +     + G+    RGT        +    Q 
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
                 Y  +K           L+ A   + V+ V PG    
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.1 bits (163), Expect = 2e-13
 Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 22/215 (10%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +  ++TG  SG+G   A  L      VV+                   +   ++ +E ++
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRR--------------EGEDLIYVEGDV 47

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLI---NNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
              + ++       ++ P   V+          +  KE     E +     +N +G F +
Sbjct: 48  TREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELY 233
             L    +++         +       N      F        AY  SK           
Sbjct: 108 LRLAAWAMRENP----PDAEGQRGVIVNTASVAAFEG-QIGQAAYAASKGGVVALTLPAA 162

Query: 234 LKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM 268
            + A  G+ V  V PG   T L +    K    + 
Sbjct: 163 RELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLA 197

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 66.5 bits (161), Expect = 4e-13
 Identities = 34/232 (14%), Positives = 66/232 (28%), Gaps = 34/232 (14%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
            + +I+G  +GIG  T K L      +V       R  E +  L       Q        
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI---RDAEVIADLSTAEGRKQA------- 51

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKE------------KLTTKEGYEVHFG 164
                    A  + K    +  L+  AG+    K                          
Sbjct: 52  --------IADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKK 103

Query: 165 INHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLM 224
            +     +++++    +       +  ++ G               +   N AY  SK  
Sbjct: 104 GHQPAAVVISSVASAHLAFDKNPLALALEAGEE--AKARAIVEHAGEQGGNLAYAGSKNA 161

Query: 225 NYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA--DIKFYQKVMIFPIAM 274
                 +    + + GV ++ + PG   T L +    D ++ + +  F   M
Sbjct: 162 LTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM 213

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 63.0 bits (152), Expect = 5e-12
 Identities = 31/223 (13%), Positives = 71/223 (31%), Gaps = 23/223 (10%)

Query: 54  MEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + GK  ++TG  S   I Y  A+ + +  A +    ++  + +  +E+     Q G  ++
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAA--QLGSDIV 59

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIK-----EKLTTKEGYEVHFGIN 166
           ++ ++A   SI      + K +PK    +++ G +   +         T+EG+++   I+
Sbjct: 60  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS 119

Query: 167 HVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNY 226
                 +       +     + +           N N                 +K    
Sbjct: 120 SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN-------------VMGLAKASLE 166

Query: 227 YFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI 269
                +      +GV V+ +  G   T                
Sbjct: 167 ANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC 209

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 62.2 bits (150), Expect = 1e-11
 Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 33/210 (15%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN 115
           GKV I+ G    +G    +   K   TV+    S     ++   +               
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKN---------W 52

Query: 116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLT 174
                SI     + + Q  ++  +   AG             +  ++    +     +  
Sbjct: 53  TEQEQSILEQTASSL-QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 175 NLLIERIQK---VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
            L    ++    + + G++     T                 S   Y  +K   ++  + 
Sbjct: 112 KLATTHLKPGGLLQLTGAAAAMGPT----------------PSMIGYGMAKAAVHHLTSS 155

Query: 232 LYLKYADKGVD--VSVVCPGWCYTNLFRHA 259
           L  K +    +  V  + P    T + R  
Sbjct: 156 LAAKDSGLPDNSAVLTIMPVTLDTPMNRKW 185

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 61.4 bits (148), Expect = 2e-11
 Identities = 16/151 (10%), Positives = 52/151 (34%), Gaps = 12/151 (7%)

Query: 54  MEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           + GK  ++ G  +   +G+  A +L +  A V L  ++     EA +  +     G  +L
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE---ALGGALL 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFG----INH 167
              ++   + +      V + +  +  L++    +     +    +     +     ++ 
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122

Query: 168 VGHFLLTNLLIERIQK---VVIVGSSLMDRG 195
                +       +++   +V +     ++ 
Sbjct: 123 YSLVAVARRAEPLLREGGGIVTLTYYASEKV 153

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 60.5 bits (145), Expect = 4e-11
 Identities = 21/206 (10%), Positives = 59/206 (28%), Gaps = 12/206 (5%)

Query: 54  MEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVL 111
           ++GK  +++G   +S I +  A+   +  A +VL     +R  + +   +   +   + L
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-RLPAKAPLLEL 62

Query: 112 MELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHF 171
              N     S+       +    K+  ++++ G        +              +   
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 172 LLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAE 231
             +   + +           +         +  +    +   +      +K         
Sbjct: 123 AYSYASMAKAL---------LPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRF 173

Query: 232 LYLKYADKGVDVSVVCPGWCYTNLFR 257
           +  +    GV  ++V  G   T    
Sbjct: 174 VAREAGKYGVRSNLVAAGPIRTLAMS 199

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 57.3 bits (137), Expect = 6e-10
 Identities = 25/220 (11%), Positives = 54/220 (24%), Gaps = 21/220 (9%)

Query: 56  GKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMEL 114
               ++TG   G+G + A+ LA+  A  ++L  RS      A E + +    G    +  
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 115 NLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLT 174
              +           +     +  + + A           T E  E       +G   L 
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 175 NLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYL 234
                             +     F   +              Y            +   
Sbjct: 129 E--------------LTRELDLTAFVLFSSFASAFGAPG-LGGYAPGNAYLDGLAQQRRS 173

Query: 235 KYADKGVDVSVVCPG-WCYTNLFRHADIKFYQKVMIFPIA 273
                 +  + V  G W  + +        +++  +  + 
Sbjct: 174 DG----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMP 209

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 55.9 bits (133), Expect = 2e-09
 Identities = 28/204 (13%), Positives = 61/204 (29%), Gaps = 18/204 (8%)

Query: 54  MEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD--GQI 109
           ++GK  +I G   N  I Y  A+      AT+     +     E+LEK  + +       
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-----ESLEKRVRPIAQELNSP 57

Query: 110 VLMELNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVG 169
            + EL+++  +  K+   +V K    +  ++++   +     + +  E  +  F      
Sbjct: 58  YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 117

Query: 170 HFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFG 229
                  L   ++                        G  +          +K       
Sbjct: 118 SVYSLIELTNTLK---------PLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAV 168

Query: 230 AELYLKYADKGVDVSVVCPGWCYT 253
             L +      + V+ +  G   T
Sbjct: 169 RYLAVDLGKHHIRVNALSAGPIRT 192

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 54  MEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE 103
           + GK   I G   ++G G+  AK LA   A +++G              + +
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGK 57

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.0 bits (110), Expect = 8e-07
 Identities = 21/193 (10%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 57  KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNL 116
           +V ++ G    +G   A  LA L   +V+G R   + +    + ++   D  I  M+   
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE- 59

Query: 117 ASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNL 176
                  + A   +     I    +   +                  G  +         
Sbjct: 60  -DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSER----S 114

Query: 177 LIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKY 236
             E + +V+     +    TI                    +      +     ++ +  
Sbjct: 115 AAEIVAEVLESEKVVSALHTIPAARFANLDEKFD-------WDVPVCGDDDESKKVVMSL 167

Query: 237 ADKGVDVSVVCPG 249
             +   +  +  G
Sbjct: 168 ISEIDGLRPLDAG 180

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 25/169 (14%)

Query: 54  MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLME 113
           ++GK  ++      +G  +A  LA   A VVL  R + + Q A + + K  +        
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-------- 72

Query: 114 LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLL 173
             +    +      +  +     H +     + +    +L  +  ++    I  V  +  
Sbjct: 73  --VNVTAAETADDASRAEAVKGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNA 126

Query: 174 TNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSK 222
                     + I G    D+G        G++ F   G         +
Sbjct: 127 -------QPPLGIGGIDATDKGKE----YGGKRAFGALGIGGLKLKLHR 164

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 45.7 bits (106), Expect = 5e-06
 Identities = 29/232 (12%), Positives = 73/232 (31%), Gaps = 45/232 (19%)

Query: 56  GKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIR------------GQEALEKLK 101
             +C I G     G G+  AKEL+K    ++ G    +               + +    
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 102 KE------------------VQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIHVLINNA 143
           K+                  + +        N+    +I++ A  + ++Y KI++L+++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 144 GVSVPIKEKL--TTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDN 201
             +  +++ L  T+++GY      +      L    +  ++                  +
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--------QSSIISLTYH 173

Query: 202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT 253
            + +      G  + A    +         L   Y    + ++ +  G   +
Sbjct: 174 ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNY---NIRINTISAGPLKS 222

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.98
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.97
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.8
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.7
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.7
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.7
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.69
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.66
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.65
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.63
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.62
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.62
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.6
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.58
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.57
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.54
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.43
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.35
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.19
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.14
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.13
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.46
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.36
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.24
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.22
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.21
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.21
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.21
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.2
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.19
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.19
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.19
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.12
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.12
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.12
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.11
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.11
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.1
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.08
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.06
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.06
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.06
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.02
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.97
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.96
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.95
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.94
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.92
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.92
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.91
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.91
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.9
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.9
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.9
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.88
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.87
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.87
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.87
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.85
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.85
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.84
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.84
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.8
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.8
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.79
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.75
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.74
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.72
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.72
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.71
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.69
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.69
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	97.66
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.66
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.63
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.61
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.61
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.6
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.57
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.54
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.52
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.52
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.51
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.47
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.46
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.43
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.41
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.4
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.35
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.34
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.34
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.31
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.31
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.26
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.21
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.2
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.19
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.18
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.15
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.14
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.14
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.12
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.12
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.11
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.04
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.03
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.97
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.95
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.91
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.89
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.88
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.81
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.81
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.79
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.72
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.72
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.59
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.58
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.53
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.53
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.49
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.48
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.48
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.47
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.47
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.44
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.44
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.43
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.4
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.3
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.28
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.12
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.11
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.1
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.08
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.08
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.0
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.0
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.99
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.91
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.9
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.83
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.79
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.78
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.63
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.4
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.34
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.34
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.25
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.12
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.09
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.08
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.99
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.94
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.89
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.7
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.6
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.38
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.17
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.13
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.12
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.96
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.95
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.85
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.85
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.66
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.52
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.51
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.46
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.35
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.15
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.91
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.79
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.72
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.72
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.69
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.5
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.31
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.19
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.07
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.93
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.88
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.84
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.75
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.74
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.71
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.51
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.47
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.37
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.14
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.99
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.99
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.98
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	90.96
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.84
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.68
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.47
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.39
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.26
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.23
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.1
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.09
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.08
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	90.06
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.84
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.67
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	89.58
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.31
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.22
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.84
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.83
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	88.76
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.74
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	88.55
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	88.53
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.14
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	87.74
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.65
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.65
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	87.59
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.37
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.21
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.09
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	86.88
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.82
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.55
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	86.54
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	86.36
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	86.01
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.93
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	85.08
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.06
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.04
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	84.98
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	84.95
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.83
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	84.72
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.45
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	84.42
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	84.34
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	83.47
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	83.43
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	83.3
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	83.26
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	83.2
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	83.1
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.87
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	82.36
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.01
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	82.01
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	81.98
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	81.26
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	81.11
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	80.86
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	80.73
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	80.68
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	80.47
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	80.33
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	80.31

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.7e-44  Score=324.15  Aligned_cols=223  Identities=19%  Similarity=0.269  Sum_probs=193.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++++.  +.++..+++|++|+++++++++++.+
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999998888664  56899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|+     +||++||..+..+.+         
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---------  154 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV---------  154 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---------
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC---------
Confidence            999999999999998888889999999999999999999999999999986     699999999887765         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPIA  273 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~  273 (384)
                             +..+|++||+|+++|+++++.|++++|||||+|+||+|+|+|.+...++..+...             +....
T Consensus       155 -------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (251)
T d2c07a1         155 -------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  227 (251)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                   7789999999999999999999999999999999999999999887765544432             12234


Q ss_pred             HHHHhhccccccccccccc
Q psy2854         274 MMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       274 ~~~~~s~s~~~~~~~i~f~  292 (384)
                      .|+++..++++++..+..|
T Consensus       228 ~fL~S~~s~~itG~~i~vD  246 (251)
T d2c07a1         228 CFLSSDKSGYINGRVFVID  246 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhCCCcCcEEEEC
Confidence            5666666777777766553

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.3e-45  Score=324.09  Aligned_cols=219  Identities=22%  Similarity=0.299  Sum_probs=191.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+...++||++|+++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            578999999999999999999999999999999999988877776665     346788999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|+     +||++||.++..+.+          
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------  145 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG----------  145 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC----------
Confidence            99999999999998888999999999999999999999999999999995     699999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHHHH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPIAM  274 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~~  274 (384)
                            +.++|++||+|+++|+++++.|++++|||||+|+||+++|+|.+...++..+...             +.....
T Consensus       146 ------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~  219 (243)
T d1q7ba_         146 ------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA  219 (243)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                  7789999999999999999999999999999999999999998877654433321             122335


Q ss_pred             HHHhhccccccccccccc
Q psy2854         275 MVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       275 ~~~~s~s~~~~~~~i~f~  292 (384)
                      |+++..++++++..+..|
T Consensus       220 fL~S~~s~~itGq~i~vd  237 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVN  237 (243)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHhCchhcCCcCCeEEEC
Confidence            666666777777766553

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-44  Score=322.96  Aligned_cols=222  Identities=21%  Similarity=0.312  Sum_probs=192.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.  +.++.+++||++|+++++++++++.+
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999999999998765  56889999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+..+.++ +.+.++|++++++|+.|+++++|.++|+|+     +||++||.++..+.+         
T Consensus        85 ~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~---------  154 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI---------  154 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT---------
T ss_pred             HcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccc---------
Confidence            99999999999999776665 679999999999999999999999999986     589999998887766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc-hHHHHHHH-------------HHHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD-IKFYQKVM-------------IFPI  272 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~-------------~~~~  272 (384)
                             +..+|++||+|+.+|+++++.|++++|||||+|+||+|+|++.+... ++..+...             +...
T Consensus       155 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~  227 (255)
T d1fmca_         155 -------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANA  227 (255)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHH
T ss_pred             -------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                   77899999999999999999999999999999999999999986543 33333221             1113


Q ss_pred             HHHHHhhccccccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ..|+++..++++++..+..|
T Consensus       228 v~fL~S~~s~~itG~~i~vD  247 (255)
T d1fmca_         228 ALFLCSPAASWVSGQILTVS  247 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhCchhcCCcCCEEEEC
Confidence            35666666677777766554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.9e-44  Score=323.72  Aligned_cols=190  Identities=20%  Similarity=0.260  Sum_probs=177.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++..++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999998888766778999999999999999999999999


Q ss_pred             CCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||..+..+.+         
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  151 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG---------  151 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS---------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC---------
Confidence            999999999999864 45788889999999999999999999999999986     699999999887765         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                             ...+|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+.
T Consensus       152 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         152 -------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  196 (258)
T ss_dssp             -------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHH
Confidence                   778999999999999999999999999999999999999998654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.5e-44  Score=320.89  Aligned_cols=219  Identities=18%  Similarity=0.244  Sum_probs=190.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+..+++||++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988777766665     346888999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++|.++|.|+     +||++||..+..+.+          
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------  147 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------  147 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----------
Confidence            99999999999998888999999999999999999999999999999986     699999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHH--------HHHHHHHHHHHHHHhh
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKF--------YQKVMIFPIAMMVVIV  279 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~s  279 (384)
                            +..+|++||+|+++|+++++.|++++|||||+|+||+++|+|.+......        ....-+.....|++..
T Consensus       148 ------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         148 ------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             ------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhCh
Confidence                  77899999999999999999999999999999999999999976543211        0111223344566666


Q ss_pred             ccccccccccccc
Q psy2854         280 GSSLMDRGTIDFD  292 (384)
Q Consensus       280 ~s~~~~~~~i~f~  292 (384)
                      .++++++..+..|
T Consensus       222 ~s~~itG~~i~vD  234 (244)
T d1nffa_         222 ESSYSTGAEFVVD  234 (244)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhCCCcCCEEEEC
Confidence            6777787776654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.8e-44  Score=319.58  Aligned_cols=223  Identities=18%  Similarity=0.337  Sum_probs=191.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.+++||++|+++++++++++.++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999988887765 567889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc-CCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR-GTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~-~~~~~~~~~~~~  206 (384)
                      +|+||+||||||+....++.+.+.++|++++++|+.|+++++|.++|+|+     +||+++|..+.. +.+         
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~---------  151 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP---------  151 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc---------
Confidence            99999999999998888999999999999999999999999999999996     699999976543 333         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHHH-------------HH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVMI-------------FP  271 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~~-------------~~  271 (384)
                             +..+|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+...  ++..+....             ..
T Consensus       152 -------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~  224 (251)
T d1vl8a_         152 -------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKG  224 (251)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             -------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                   67799999999999999999999999999999999999999986532  222222211             11


Q ss_pred             HHHHHHhhccccccccccccc
Q psy2854         272 IAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       272 ~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ...|+++..++++++..+..|
T Consensus       225 ~v~fL~S~~a~~itG~~i~vD  245 (251)
T d1vl8a_         225 VAVFLASEEAKYVTGQIIFVD  245 (251)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhCCCcCcEEEeC
Confidence            335556666666676666543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.6e-44  Score=317.57  Aligned_cols=217  Identities=21%  Similarity=0.240  Sum_probs=184.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++       +..+++||++|+++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999987766655433       467789999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|+     .++++|| .+..+.+         
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~---------  143 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNL---------  143 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCT---------
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCC---------
Confidence            999999999999998888999999999999999999999999999999997     2555554 4444544         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPIA  273 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~  273 (384)
                             +..+|++||+|+.+|+++|+.|++++|||||+|+||+++|++.+..++...++..             +....
T Consensus       144 -------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v  216 (242)
T d1ulsa_         144 -------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAA  216 (242)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                   6789999999999999999999999999999999999999999887765544332             11233


Q ss_pred             HHHHhhccccccccccccc
Q psy2854         274 MMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       274 ~~~~~s~s~~~~~~~i~f~  292 (384)
                      .|+++..++++++..+..|
T Consensus       217 ~fL~S~~s~~itG~~i~vD  235 (242)
T d1ulsa_         217 LFLLSDESSFITGQVLFVD  235 (242)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhchhhCCCCCcEEEEC
Confidence            5666666777777776554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6.5e-44  Score=321.78  Aligned_cols=187  Identities=26%  Similarity=0.330  Sum_probs=175.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.+++||++|+++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999999999999999998764  56899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +||+||||||+....++.+.+.++|++++++|+.|+++++|+++|++.       +||+++|..+..+.+          
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~----------  148 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV----------  148 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT----------
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc----------
Confidence            999999999998888999999999999999999999999999999753       699999999887766          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..
T Consensus       149 ------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  194 (257)
T d2rhca1         149 ------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV  194 (257)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHH
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHH
Confidence                  7789999999999999999999999999999999999999997543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1e-43  Score=320.53  Aligned_cols=224  Identities=27%  Similarity=0.319  Sum_probs=191.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          51 YKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        51 ~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++++.  +.++..++||++|+++++++++++
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999864 566667777654  568899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .+++|+||+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|.      +|+++||.++..+.+      
T Consensus        80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~------  153 (261)
T d1geea_          80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP------  153 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT------
T ss_pred             HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc------
Confidence            99999999999999998888999999999999999999999999999999984      388999998877765      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH-------------
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM-------------  268 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~-------------  268 (384)
                                ...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+...  ++..+...             
T Consensus       154 ----------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~ped  223 (261)
T d1geea_         154 ----------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEE  223 (261)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHH
T ss_pred             ----------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHH
Confidence                      77899999999999999999999999999999999999999976432  22222211             


Q ss_pred             HHHHHHHHHhhccccccccccccc
Q psy2854         269 IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 ~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      +.....|+++..++++++..+..|
T Consensus       224 iA~~v~fL~S~~s~~itG~~i~vD  247 (261)
T d1geea_         224 IAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCchhcCCcCCeEEEC
Confidence            122335666666777787777654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.1e-43  Score=320.79  Aligned_cols=189  Identities=23%  Similarity=0.354  Sum_probs=170.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+.. +.++.+++||++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999975 55666667766554 568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.++++++|+++|+|+     +||++||.++..+.+          
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------  150 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------  150 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----------
Confidence            99999999999998888999999999999999999999999999999996     699999999888766          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                            +..+|++||+|+.+|+++++.|++++|||||+|+||+|+|+|.+..
T Consensus       151 ------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         151 ------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             ------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh
Confidence                  7789999999999999999999999999999999999999997654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.6e-44  Score=321.55  Aligned_cols=222  Identities=21%  Similarity=0.255  Sum_probs=171.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.||++|+++++++++++.++
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999888765  468999999999999999999999999


Q ss_pred             C-CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 Y-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~-g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      + |++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||..+..+.+         
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~---------  153 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---------  153 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc---------
Confidence            8 7899999999998888999999999999999999999999999999986     699999999877765         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH--HH------------H
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI--FP------------I  272 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~------------~  272 (384)
                             +..+|++||+|+.+|+++++.|++++|||||+|+||+|+|+|.+....+...+.+.  .|            .
T Consensus       154 -------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~  226 (259)
T d1xq1a_         154 -------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSL  226 (259)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHH
T ss_pred             -------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence                   66789999999999999999999999999999999999999987654322222111  11            3


Q ss_pred             HHHHHhhccccccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ..|+++..++++++..+..|
T Consensus       227 v~fL~S~~s~~iTG~~i~vD  246 (259)
T d1xq1a_         227 VAFLCMPAASYITGQTICVD  246 (259)
T ss_dssp             HHHHTSGGGTTCCSCEEECC
T ss_pred             HHHHhCchhcCCcCcEEEeC
Confidence            35666666677777666554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.4e-43  Score=319.56  Aligned_cols=222  Identities=23%  Similarity=0.293  Sum_probs=192.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.+++||++|+++++++++++.++
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999888765  568889999999999999999999999


Q ss_pred             CC-CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YP-KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g-~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++ ++|+||||||+....++.+.+.++|++++++|+.|++++++.++|+|+     +||++||..+..+.+         
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  153 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP---------  153 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT---------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc---------
Confidence            87 799999999998888899999999999999999999999999999985     699999998877765         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch-----HHHHHHH-------------
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI-----KFYQKVM-------------  268 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~~~-------------  268 (384)
                             +...|++||+|+.+|+++++.|++++|||||+|+||+|+|+|.+....     +..++..             
T Consensus       154 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~ped  226 (259)
T d2ae2a_         154 -------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE  226 (259)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHH
T ss_pred             -------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHH
Confidence                   778999999999999999999999999999999999999998754321     1222211             


Q ss_pred             HHHHHHHHHhhccccccccccccc
Q psy2854         269 IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 ~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      +.....|+++..++++++..+..|
T Consensus       227 vA~~v~fL~S~~s~~itG~~i~VD  250 (259)
T d2ae2a_         227 LAAMVAFLCFPAASYVTGQIIYVD  250 (259)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCchhCCCcCcEEEEC
Confidence            111335566666677777766554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.4e-43  Score=317.31  Aligned_cols=220  Identities=19%  Similarity=0.276  Sum_probs=176.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++.  ..+.+++.  +.++.+++||++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999987532  22233322  578999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||..+..+.+          
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------  147 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE----------  147 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS----------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc----------
Confidence            99999999999998888999999999999999999999999999999996     699999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHH---------------HHHHH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV---------------MIFPI  272 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---------------~~~~~  272 (384)
                            +..+|++||+|+.+|+++|+.|++++|||||+|+||+++|++.+....+...+.               -+...
T Consensus       148 ------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~  221 (247)
T d2ew8a1         148 ------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGA  221 (247)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHH
T ss_pred             ------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHH
Confidence                  778999999999999999999999999999999999999999765432111111               11223


Q ss_pred             HHHHHhhccccccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ..|+++..++++++..+..|
T Consensus       222 v~fL~S~~s~~itG~~i~vD  241 (247)
T d2ew8a1         222 AAFLASDDASFITGQTLAVD  241 (247)
T ss_dssp             HHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHhCchhcCCcCCeEEEC
Confidence            35555556666676666543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.2e-43  Score=316.76  Aligned_cols=222  Identities=25%  Similarity=0.260  Sum_probs=190.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..   ++++.+++||++|+++++++++++.+
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999998888877777642   46899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|+      +||++||..+..+.+        
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~--------  150 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------  150 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT--------
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC--------
Confidence            999999999999998888999999999999999999999999999999996      489999998887765        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCccccCchHHHHHH--------------HH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLK--YADKGVDVSVVCPGWCYTNLFRHADIKFYQKV--------------MI  269 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~--------------~~  269 (384)
                              ...+|++||+|+.+|+++++.|  ++++|||||+|+||+|+|+|.+..........              -+
T Consensus       151 --------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedv  222 (251)
T d1zk4a1         151 --------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDI  222 (251)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHH
T ss_pred             --------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHH
Confidence                    7789999999999999999998  56899999999999999999876543221111              11


Q ss_pred             HHHHHHHHhhccccccccccccc
Q psy2854         270 FPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       270 ~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      .....|+++..++++++..+..|
T Consensus       223 A~~v~fL~S~~s~~itG~~i~vD  245 (251)
T d1zk4a1         223 AYICVYLASNESKFATGSEFVVD  245 (251)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhCchhCCCcCcEEEEC
Confidence            22345666666777777666553

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.5e-44  Score=321.89  Aligned_cols=219  Identities=21%  Similarity=0.243  Sum_probs=189.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.+++||++|+++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999988777666554     357889999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||..+..+.+          
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~----------  146 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----------  146 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc----------
Confidence            99999999999998888999999999999999999999999999999986     799999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHH--------------HHHHHHHHH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFY--------------QKVMIFPIA  273 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--------------~~~~~~~~~  273 (384)
                            +.++|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|......+..              +..-+....
T Consensus       147 ------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         147 ------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             ------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                  778999999999999999999999999999999999999998753221000              011223345


Q ss_pred             HHHHhhccccccccccccc
Q psy2854         274 MMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       274 ~~~~~s~s~~~~~~~i~f~  292 (384)
                      .|+++..++++++..+..|
T Consensus       221 ~fL~S~~a~~itG~~i~vD  239 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVD  239 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhchhhCCCCCceEEeC
Confidence            6677777777887777654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.5e-43  Score=317.50  Aligned_cols=186  Identities=22%  Similarity=0.269  Sum_probs=173.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .|+||||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.+++||++|+++++++++++.+++|+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999999999999999999888765  568999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|.      +|+++||.++..+.+            
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------  146 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------  146 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc------------
Confidence            99999999998888999999999999999999999999999999864      489999998877765            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                          ..+.|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+..
T Consensus       147 ----~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  192 (255)
T d1gega_         147 ----ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI  192 (255)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH
T ss_pred             ----ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhh
Confidence                7789999999999999999999999999999999999999987654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.4e-43  Score=319.25  Aligned_cols=186  Identities=20%  Similarity=0.333  Sum_probs=173.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.+++||++|+++++++++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999988877777665     567899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|.|.      +||++||..+..+.+         
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------  147 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA---------  147 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---------
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc---------
Confidence            99999999999998888999999999999999999999999999998753      699999999887766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             ..++|++||+|+.+|+++++.|++++|||||+|+||+++|++.+..
T Consensus       148 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~  193 (256)
T d1k2wa_         148 -------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGV  193 (256)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHH
T ss_pred             -------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhh
Confidence                   7789999999999999999999999999999999999999997543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.8e-43  Score=317.88  Aligned_cols=187  Identities=21%  Similarity=0.272  Sum_probs=174.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..++||++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999888888664  568999999999999999999999999


Q ss_pred             CCCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      +|++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|.     +||++||..+..+.+         
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~---------  150 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP---------  150 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT---------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc---------
Confidence            9999999999998644 6788999999999999999999999999999985     699999999887766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             ...+|++||+|+.+|+++++.|++++|||||+|+||+|+|+|..
T Consensus       151 -------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~  194 (260)
T d1zema1         151 -------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW  194 (260)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchh
Confidence                   77899999999999999999999999999999999999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.3e-43  Score=312.81  Aligned_cols=218  Identities=21%  Similarity=0.328  Sum_probs=187.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGC-RSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ++||||||++|||+++|++|+++|++|++.+ |+.+.+++..+++++.  +.++.+++||++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5999999999999999999999999999875 5666677777777654  578999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|+||||||.....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||.++..+.+             
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-------------  146 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-------------  146 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-------------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC-------------
Confidence            99999999998888999999999999999999999999999999985     799999999887766             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHHHHHHH
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPIAMMVV  277 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~~~~~  277 (384)
                         +.++|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+...++..+...             +.....|++
T Consensus       147 ---~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         147 ---GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence               7789999999999999999999999999999999999999998887665544331             122334554


Q ss_pred             -hhccccccccccccc
Q psy2854         278 -IVGSSLMDRGTIDFD  292 (384)
Q Consensus       278 -~s~s~~~~~~~i~f~  292 (384)
                       ...++++++..+..|
T Consensus       224 ~S~~a~~itG~~i~vd  239 (244)
T d1edoa_         224 LSPAASYITGQAFTID  239 (244)
T ss_dssp             HCSGGGGCCSCEEEES
T ss_pred             CCchhcCCcCCeEEeC
Confidence             345566677666543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.3e-43  Score=310.40  Aligned_cols=212  Identities=22%  Similarity=0.286  Sum_probs=176.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..++||++|+++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998653             23567899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||+....++.+.+.|+|++++++|+.++++++|.++|+|+     +||++||.++..+.+         
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---------  140 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG---------  140 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc---------
Confidence            999999999999998888999999999999999999999999999999986     699999999887765         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH-------------HHHHH
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM-------------IFPIA  273 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~  273 (384)
                             +..+|++||+|+++|+++++.|++++|||||+|+||+++|+|.+..++...+...             +....
T Consensus       141 -------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  213 (237)
T d1uzma1         141 -------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV  213 (237)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                   7789999999999999999999999999999999999999998876654433321             12233


Q ss_pred             HHHHhhccccccccccccc
Q psy2854         274 MMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       274 ~~~~~s~s~~~~~~~i~f~  292 (384)
                      .|++...++++++..+..|
T Consensus       214 ~fL~S~~s~~itG~~i~vd  232 (237)
T d1uzma1         214 SFLASEDASYISGAVIPVD  232 (237)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhcCCcCCeEEEC
Confidence            5666666777777766553

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-43  Score=312.60  Aligned_cols=184  Identities=23%  Similarity=0.390  Sum_probs=167.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++      .+..+++||++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999977666554432      46788999999999999999999999


Q ss_pred             CCCccEEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|++|+||||||+.. ..++++.+.++|++++++|+.|+++++|+++|+|+    +||++||..+..+.+          
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~----------  146 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------  146 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc----------
Confidence            999999999999754 45677889999999999999999999999999996    799999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                            ...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+.
T Consensus       147 ------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         147 ------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             ------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH
Confidence                  778999999999999999999999999999999999999998653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.6e-42  Score=310.87  Aligned_cols=231  Identities=23%  Similarity=0.250  Sum_probs=193.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..++||++|+++++++++++.+
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999888887665 46789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.|++++++.+.|+|.      +|++++|..........      
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~------  157 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------  157 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc------
Confidence            999999999999998888999999999999999999999999999999984      46677766554332210      


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH-------------HHH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI-------------FPI  272 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-------------~~~  272 (384)
                         ....++..+|++||+|+.+|+++++.|++++|||||+|+||+|+|++....+++..+....             ...
T Consensus       158 ---~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~  234 (260)
T d1h5qa_         158 ---LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQ  234 (260)
T ss_dssp             ---TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             ---cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               0011156789999999999999999999999999999999999999998877655444321             113


Q ss_pred             HHHHHhhccccccccccccc
Q psy2854         273 AMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       273 ~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ..|+++..++++++..+..|
T Consensus       235 v~fL~S~~s~~itG~~i~VD  254 (260)
T d1h5qa_         235 AILLLSDHATYMTGGEYFID  254 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEEC
T ss_pred             HHHHhcchhCCCcCceEEEC
Confidence            35666666666777666553

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-42  Score=310.56  Aligned_cols=181  Identities=22%  Similarity=0.217  Sum_probs=165.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++       ...+++||++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999999976532 22222       2456899999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      +|+||+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|+     +||+++|..+..+.+          
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~----------  143 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------  143 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc----------
Confidence            99999999999998889999999999999999999999999999999995     699999999887766          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                            +..+|++||+|+.+|+++++.|++++|||||+|+||+++|++.+
T Consensus       144 ------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~  187 (248)
T d2d1ya1         144 ------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL  187 (248)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             ------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHH
Confidence                  77899999999999999999999999999999999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-43  Score=310.99  Aligned_cols=191  Identities=28%  Similarity=0.371  Sum_probs=178.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.+++.+.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999999999999998764  57899999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      ++|++|+||||||.....++.+.+.++|++++++|+.|++++++.++|+|+     +||++||.++..+.+         
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~---------  151 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---------  151 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH---------
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC---------
Confidence            999999999999998888888889999999999999999999999999996     699999999988766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCC---CCcEEEEEecCcccCCccccCc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD---KGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~---~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                             ++++|++||+|+.+|+++|+.|+++   +||+|++|+||+|+|+|.++..
T Consensus       152 -------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~  201 (244)
T d1yb1a_         152 -------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS  201 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC
Confidence                   7889999999999999999999865   6899999999999999987653

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.6e-42  Score=308.99  Aligned_cols=187  Identities=23%  Similarity=0.344  Sum_probs=175.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCE-------EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKAT-------VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~-------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ++||||||++|||+++|++|+++|++       |++++|+.+++++..+++++.  +.++.+++||++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999999999999999997       999999999999988888764  568899999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+++|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||.++..+.+       
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-------  152 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR-------  152 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC-------
Confidence            99999999999999998889999999999999999999999999999999996     699999999887766       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                               +.++|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..+.
T Consensus       153 ---------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~  200 (240)
T d2bd0a1         153 ---------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD  200 (240)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH
Confidence                     778999999999999999999999999999999999999999876543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=8.9e-43  Score=313.04  Aligned_cols=220  Identities=20%  Similarity=0.236  Sum_probs=188.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.+..+++||++|+++++++++++.+
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999988777766655     46788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ++|++|+||||||+..+.++.+.+.++|++++++|+.++++++++++|+|+    +||++||..+..+.+          
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~----------  146 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE----------  146 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT----------
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc----------
Confidence            999999999999998888999999999999999999999999999999997    699999999887765          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCccccCc-----hHHHHH-------------H
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYAD--KGVDVSVVCPGWCYTNLFRHAD-----IKFYQK-------------V  267 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~-------------~  267 (384)
                            ...+|++||+|+.+|+++++.|+++  +|||||+|+||+|+|++.+...     .+...+             .
T Consensus       147 ------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe  220 (253)
T d1hxha_         147 ------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             ------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH
Confidence                  7789999999999999999999987  4699999999999999864321     111100             0


Q ss_pred             HHHHHHHHHHhhccccccccccccc
Q psy2854         268 MIFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       268 ~~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      -+.....|+++..++++++..+..|
T Consensus       221 dvA~~v~fL~S~~s~~itG~~i~VD  245 (253)
T d1hxha_         221 RIAQLVLFLASDESSVMSGSELHAD  245 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEEC
Confidence            1222445667767777787776654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=7.3e-42  Score=310.17  Aligned_cols=223  Identities=18%  Similarity=0.227  Sum_probs=187.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++..   .+.+.+++||++|+++++++++++.+
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999888888877743   35688899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC--CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVPI--KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||+....  .+.+.+.++|++++++|+.|+++++|+++|+|.     +||+++|..+..+.+.      
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~------  152 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG------  152 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT------
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc------
Confidence            999999999999986544  467789999999999999999999999999985     6999999988765441      


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc---hHHHHHHH-------------
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD---IKFYQKVM-------------  268 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~-------------  268 (384)
                               ....|++||+|+.+|+++++.|++++|||||+|+||+++|+|.++..   ....++..             
T Consensus       153 ---------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p  223 (268)
T d2bgka1         153 ---------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA  223 (268)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred             ---------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCH
Confidence                     34579999999999999999999999999999999999999986542   22222111             


Q ss_pred             --HHHHHHHHHhhccccccccccccc
Q psy2854         269 --IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 --~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                        +.....|+++..++++++..+..|
T Consensus       224 edvA~~v~fL~S~~s~~itGq~i~VD  249 (268)
T d2bgka1         224 EDVADAVAYLAGDESKYVSGLNLVID  249 (268)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhChhhCCccCceEEEC
Confidence              112335666666777787777654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.8e-41  Score=304.06  Aligned_cols=222  Identities=23%  Similarity=0.289  Sum_probs=187.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+||||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++++++||+++.++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999988888665  567888999999999999999999999


Q ss_pred             C-CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         133 Y-PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       133 ~-g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                      + +.+|+||||||.....++.+.+.++|++++++|+.+++++++++.|.|.     +||++||..+..+.+         
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~---------  151 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP---------  151 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc---------
Confidence            8 6899999999998888999999999999999999999999999999986     799999999887766         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc------hHHHHHHH------------
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD------IKFYQKVM------------  268 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~~~~~~~~------------  268 (384)
                             ...+|+++|+|+++|++.+++|++++|||||+|+||+++|+|.+...      .+...+..            
T Consensus       152 -------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pe  224 (258)
T d1ae1a_         152 -------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ  224 (258)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHH
Confidence                   77899999999999999999999999999999999999999976542      22222221            


Q ss_pred             -HHHHHHHHHhhccccccccccccc
Q psy2854         269 -IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 -~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       +.....|+++..++++++..+..|
T Consensus       225 diA~~v~fL~S~~s~~itG~~i~vD  249 (258)
T d1ae1a_         225 EVSALIAFLCFPAASYITGQIIWAD  249 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEeC
Confidence             111335566666677777777654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.4e-42  Score=309.90  Aligned_cols=191  Identities=21%  Similarity=0.295  Sum_probs=163.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ...++.+++||++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999987753 235699999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC----CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCccc-ccCCcCcCCC
Q psy2854         132 QYPKIHVLINNAGVSVPI----KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLM-DRGTIDFDNL  202 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~-~~~~~~~~~~  202 (384)
                      ++|++|+||||||+..+.    ++.+.+.|+|++++++|+.|+++++|+++|+|+    ++|+++|+.+ ..+.+     
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~-----  156 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP-----  156 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT-----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC-----
Confidence            999999999999986443    345568899999999999999999999999997    5788777754 44544     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 ..++|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..
T Consensus       157 -----------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~  202 (264)
T d1spxa_         157 -----------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM  202 (264)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----
T ss_pred             -----------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhcc
Confidence                       6788999999999999999999999999999999999999997653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=305.80  Aligned_cols=198  Identities=19%  Similarity=0.224  Sum_probs=179.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      |-..+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++++...+.++.+++||++|++++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            33456899999999999999999999999999999999999999999999998876567899999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCcccccCCcCcCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDRGTIDFDN  201 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~~~~~~~~  201 (384)
                      +.+++|+||+||||||...+.++.+.+.++|++.+++|+.+++++++.++|.|+       +||++||.++..+.+.   
T Consensus        83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~---  159 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL---  159 (257)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC---
T ss_pred             HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC---
Confidence            999999999999999998889999999999999999999999999999999864       6999999987655431   


Q ss_pred             CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCccccCc
Q psy2854         202 LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKY--ADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       202 ~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                 .....|++||+|+.+|+++|+.|+  +++||+||+|+||.++|++.....
T Consensus       160 -----------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~  209 (257)
T d1xg5a_         160 -----------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH  209 (257)
T ss_dssp             -----------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT
T ss_pred             -----------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC
Confidence                       156789999999999999999998  789999999999999999876543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.2e-41  Score=303.59  Aligned_cols=219  Identities=21%  Similarity=0.265  Sum_probs=182.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     ++++.+++||++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987766555443     468899999999999999999999999


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +|++|+||||||.....++.+.+.++|++++++|+.+++.++|.+.|+++  ++++++|+.+..+.+             
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-------------  143 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-------------  143 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-------------
T ss_pred             hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc-------------
Confidence            99999999999998888999999999999999999999999999999997  344455554444433             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH-------------HHHHHHHH
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI-------------FPIAMMVV  277 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-------------~~~~~~~~  277 (384)
                         ++..|+++|+|+++|+++|++|++++|||||+|+||+++|++.+..+++..++...             .....|++
T Consensus       144 ---~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         144 ---GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL  220 (241)
T ss_dssp             ---HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             ---CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence               67889999999999999999999999999999999999999998877655554421             11335666


Q ss_pred             hhccccccccccccc
Q psy2854         278 IVGSSLMDRGTIDFD  292 (384)
Q Consensus       278 ~s~s~~~~~~~i~f~  292 (384)
                      +..++++++..+..|
T Consensus       221 S~~s~~itG~~i~vD  235 (241)
T d2a4ka1         221 SEESAYITGQALYVD  235 (241)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             cchhCCCcCceEEeC
Confidence            666777777766554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-41  Score=308.87  Aligned_cols=191  Identities=24%  Similarity=0.258  Sum_probs=170.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++..++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999998887652 235789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCC----CCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCc-ccccCCcCcCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKE----KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSS-LMDRGTIDFDNL  202 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~-~~~~~~~~~~~~  202 (384)
                      ++|++|+||||||+..+.++    .+.+.++|++++++|+.++++++|+++|+|+    ++|+++|+ ++..+.+     
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~-----  156 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP-----  156 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC-----
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCC-----
Confidence            99999999999999766554    3457778999999999999999999999996    57777665 4455554     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 +..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..
T Consensus       157 -----------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  202 (272)
T d1xkqa_         157 -----------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM  202 (272)
T ss_dssp             -----------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred             -----------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc
Confidence                       7789999999999999999999999999999999999999997643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-41  Score=307.60  Aligned_cols=224  Identities=21%  Similarity=0.368  Sum_probs=190.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ---DGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      ..|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+...   +.++..++||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999976542   46899999999999999999999


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.     +||++||. +..+.+      
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~------  160 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFP------  160 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCT------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-cccccc------
Confidence            999999999999999998888999999999999999999999999999999987     47777553 333333      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc----hHHHHHH------------
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD----IKFYQKV------------  267 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~~~~~~------------  267 (384)
                                ....|++||+|+.+|+++++.|++++|||||+|+||+|+|++.....    +++.+..            
T Consensus       161 ----------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~p  230 (297)
T d1yxma1         161 ----------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP  230 (297)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCT
T ss_pred             ----------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCH
Confidence                      67789999999999999999999999999999999999999864322    1111111            


Q ss_pred             -HHHHHHHHHHhhccccccccccccc
Q psy2854         268 -MIFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       268 -~~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       -+.....|+++..++++++..+..|
T Consensus       231 edvA~~v~fL~Sd~s~~iTG~~i~VD  256 (297)
T d1yxma1         231 EEVSSVVCFLLSPAASFITGQSVDVD  256 (297)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCchhcCcCCcEEEeC
Confidence             1233446777777888888777665

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-41  Score=301.38  Aligned_cols=215  Identities=20%  Similarity=0.228  Sum_probs=179.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      ..+..+.||++|++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~----~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKAL----G   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----H
Confidence            3689999999999999999999999999999999999977766555443      35778899999999887655    5


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.++++++|.+.|.|.      +||+++|..+..+.+        
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------  142 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------  142 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC--------
Confidence            679999999999998888999999999999999999999999999999753      699999998877665        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH-------------HH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM-------------IF  270 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~-------------~~  270 (384)
                              +..+|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+...  ++..++..             +.
T Consensus       143 --------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva  214 (242)
T d1cyda_         143 --------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVV  214 (242)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             --------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                    77899999999999999999999999999999999999999976432  23322221             11


Q ss_pred             HHHHHHHhhccccccccccccc
Q psy2854         271 PIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       271 ~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ....|++...++++++..+..|
T Consensus       215 ~~v~fL~S~~s~~itG~~i~vD  236 (242)
T d1cyda_         215 NSILFLLSDRSASTSGGGILVD  236 (242)
T ss_dssp             HHHHHHHSGGGTTCCSSEEEES
T ss_pred             HHHHHHhCchhcCcCCceEEeC
Confidence            1335666666677777766554

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.4e-41  Score=305.74  Aligned_cols=191  Identities=23%  Similarity=0.262  Sum_probs=169.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+... ..++.+++||++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999998877532 34789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC--CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVPI--KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      ++|++|+||||||.....  ...+.+.|+|++++++|+.++++++|+++|+|+     +|+++||.++..+.+       
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~-------  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS-------  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT-------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC-------
Confidence            999999999999975443  345568899999999999999999999999996     466666666655554       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                               +.++|++||+|+.+|+++++.|++++|||||+|+||+|+|++.+..
T Consensus       154 ---------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  199 (274)
T d1xhla_         154 ---------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM  199 (274)
T ss_dssp             ---------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred             ---------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh
Confidence                     7789999999999999999999999999999999999999986543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-41  Score=299.19  Aligned_cols=215  Identities=18%  Similarity=0.241  Sum_probs=179.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      ..+..+++|++|++++++++    +
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----H
Confidence            3589999999999999999999999999999999999987766655443      35778899999999887665    5


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      ++|++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.+.      +||++||..+..+.+        
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~--------  144 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------  144 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc--------
Confidence            679999999999998888999999999999999999999999999999752      699999999877765        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch--HHHHHHH-------------HH
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI--KFYQKVM-------------IF  270 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~~~-------------~~  270 (384)
                              ...+|++||+|+++|+++++.|++++|||||+|+||+|+|++.+....  +..+...             +.
T Consensus       145 --------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA  216 (244)
T d1pr9a_         145 --------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVV  216 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             --------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHH
Confidence                    778999999999999999999999999999999999999999765432  2222111             11


Q ss_pred             HHHHHHHhhccccccccccccc
Q psy2854         271 PIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       271 ~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ....|+++..++++++..+..|
T Consensus       217 ~~v~fL~S~~a~~itG~~i~vD  238 (244)
T d1pr9a_         217 NAILFLLSDRSGMTTGSTLPVE  238 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCchhCCcCCcEEEEC
Confidence            1335666666777777766554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.7e-40  Score=302.16  Aligned_cols=185  Identities=21%  Similarity=0.192  Sum_probs=164.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..+++|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999987776655543     45789999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCC-----CCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIK-----EKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~  202 (384)
                      ++|++|+||||||+.....     ..+.++++|++++++|+.|+++++|+++|+|+    +||+++|..+..+.+     
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~-----  150 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG-----  150 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS-----
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC-----
Confidence            9999999999999855432     23345567999999999999999999999996    699999998877665     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                                 +.++|++||+|+.+|+++|+.|+++. ||||+|+||+|+|+|...
T Consensus       151 -----------~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~  194 (276)
T d1bdba_         151 -----------GGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGP  194 (276)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCC
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCc
Confidence                       77899999999999999999999874 999999999999998754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.1e-40  Score=297.23  Aligned_cols=188  Identities=26%  Similarity=0.397  Sum_probs=168.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+. +..++..+++.+.  +.+++.++||++|+++++++++++.
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999999876554 4456666666554  5688999999999999999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCccccc-CCcCcCCCCcCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDR-GTIDFDNLNGEK  206 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~-~~~~~~~~~~~~  206 (384)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|+   ++++++|..+.. +.+         
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~---------  150 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------  150 (259)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC---------
T ss_pred             HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC---------
Confidence            9999999999999998888899999999999999999999999999999998   577777766544 333         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                             .+..|++||+|+.+|+++|++|++++|||||+|+||+++|+|.+
T Consensus       151 -------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~  194 (259)
T d1ja9a_         151 -------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  194 (259)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhh
Confidence                   67899999999999999999999999999999999999999853

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=300.12  Aligned_cols=182  Identities=24%  Similarity=0.399  Sum_probs=167.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.+++||++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            36999999999999999999999999999999999999999998888776666789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      |++|+||||||+.        ..++|++++++|+.+++.+++.++|+|.        +||++||.++..+.+        
T Consensus        81 G~iDilVnnAg~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~--------  144 (254)
T d2gdza1          81 GRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA--------  144 (254)
T ss_dssp             SCCCEEEECCCCC--------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT--------
T ss_pred             CCcCeeccccccc--------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC--------
Confidence            9999999999984        3456899999999999999999999986        399999999887766        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHH--HHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAE--LYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~--la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                              ..++|++||+|+.+|+++  |+.|++++|||||+|+||+|+|+|.+..
T Consensus       145 --------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~  192 (254)
T d2gdza1         145 --------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI  192 (254)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG
T ss_pred             --------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhc
Confidence                    778999999999999997  7889999999999999999999997654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-40  Score=302.23  Aligned_cols=219  Identities=16%  Similarity=0.254  Sum_probs=181.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM---------IRGQEALEKLKKEVQDGQIVLMELNLASFDSI  122 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v  122 (384)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++..     +.....+|++|.+++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~   77 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGKAVANYDSVEAG   77 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCEEEEECCCGGGH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-----cccccccccchHHHH
Confidence            678999999999999999999999999999999987654         334444444433     234568999999999


Q ss_pred             HHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCc
Q psy2854         123 KNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTI  197 (384)
Q Consensus       123 ~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~  197 (384)
                      +++++++.+++|+||+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|+     +||++||..+..+.+
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            999999999999999999999999889999999999999999999999999999999996     799999999887766


Q ss_pred             CcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHH---HHHHHHH
Q psy2854         198 DFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV---MIFPIAM  274 (384)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~  274 (384)
                                      +...|++||+|+.+|+++|+.|++++|||||+|+||++.|++....+.+..+..   .+.+...
T Consensus       158 ----------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~  221 (302)
T d1gz6a_         158 ----------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVL  221 (302)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHH
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHH
Confidence                            778999999999999999999999999999999999999988766654332211   1223445


Q ss_pred             HHHhhccccccccccccc
Q psy2854         275 MVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       275 ~~~~s~s~~~~~~~i~f~  292 (384)
                      |++. ++...++..+..|
T Consensus       222 fL~S-~~a~itG~~i~vd  238 (302)
T d1gz6a_         222 WLCH-ESCEENGGLFEVG  238 (302)
T ss_dssp             HHTS-TTCCCCSCEEEEE
T ss_pred             HHcC-CCcCCCCcEEEeC
Confidence            5554 3444566655443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.5e-39  Score=295.59  Aligned_cols=194  Identities=25%  Similarity=0.404  Sum_probs=172.1

Q ss_pred             CCCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Q psy2854          48 SPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFA  126 (384)
Q Consensus        48 ~~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~  126 (384)
                      .|.+.+|+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++++.  +.++.++++|++|++++++++
T Consensus        10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHH
Confidence            3455689999999999999999999999999999999998875 4556666666554  568999999999999999999


Q ss_pred             HHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         127 KNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       127 ~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      +++.+++|++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|+|.   ++++++|..+.....      
T Consensus        88 ~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~------  161 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------  161 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------
T ss_pred             HHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc------
Confidence            99999999999999999998888899999999999999999999999999999998   688888876544322      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                               +....|++||+|+++|+++++.|++++|||||+|+||+|+|++.+.
T Consensus       162 ---------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         162 ---------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             ---------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHH
Confidence                     1667899999999999999999999999999999999999998643

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=6.9e-40  Score=294.24  Aligned_cols=183  Identities=22%  Similarity=0.234  Sum_probs=165.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA-SFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~i~  130 (384)
                      ++++||+|+||||++|||+++|++|+++|++|++++|+.++.++ .++++...++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999998877544 456666666778999999998 6778999999999


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--------cEEEEcCcccccCCcCcCCC
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--------KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--------~iv~vsS~~~~~~~~~~~~~  202 (384)
                      +++|+||+||||||..        +++.|++++++|+.|+++++++++|+|.        +||+++|.++..+.+     
T Consensus        80 ~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~-----  146 (254)
T d1sbya1          80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----  146 (254)
T ss_dssp             HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----
T ss_pred             HHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC-----
Confidence            9999999999999963        5688999999999999999999999995        399999999987766     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                                 ++.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..
T Consensus       147 -----------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~  192 (254)
T d1sbya1         147 -----------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred             -----------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc
Confidence                       7789999999999999999999999999999999999999986543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-39  Score=292.46  Aligned_cols=189  Identities=21%  Similarity=0.199  Sum_probs=171.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAK---LKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~---~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      +.|+||++|||||++|||+++|++|++   +|++|++++|+.+++++..+++....++.++.+++||++|+++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999996   79999999999999999999998887777899999999999999999999


Q ss_pred             HHHh----CCCccEEEECCCCCCC---CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-------cEEEEcCccccc
Q psy2854         129 VMKQ----YPKIHVLINNAGVSVP---IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-------KVVIVGSSLMDR  194 (384)
Q Consensus       129 i~~~----~g~id~lvnnAG~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-------~iv~vsS~~~~~  194 (384)
                      +.+.    ++.+|++|||||...+   .++.+.+.++|++++++|+.|++++++.++|+|+       +||++||.++..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8773    4689999999998543   4567789999999999999999999999999996       599999999887


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      +.+                ++++|++||+|+.+|+++|+.|  ++|||||+|+||+|+|+|.+.
T Consensus       162 ~~~----------------~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~  207 (259)
T d1oaaa_         162 PYK----------------GWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHH
T ss_pred             CCc----------------cchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHH
Confidence            766                7789999999999999999999  679999999999999998753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.1e-39  Score=289.67  Aligned_cols=222  Identities=15%  Similarity=0.169  Sum_probs=176.8

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+|+||++|||||+|  |||+++|++|+++|++|++++|+++..++ .+++...  .++...+++|++|+++++++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEA--LGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH--TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhc--cCcccccccccCCHHHHHHHHHHH
Confidence            378999999999986  99999999999999999999998654444 4444443  356778999999999999999999


Q ss_pred             HHhCCCccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCC
Q psy2854         130 MKQYPKIHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNL  202 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~  202 (384)
                      .+++|++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++.+.|.|+   +||++||..+..+.+     
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~-----  155 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-----  155 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-----
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC-----
Confidence            9999999999999998542    3456778999999999999999999999999987   699999999887765     


Q ss_pred             CcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH------------
Q psy2854         203 NGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM------------  268 (384)
Q Consensus       203 ~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~------------  268 (384)
                                 +..+|++||+|+++|+++++.|++++|||||+|+||+++|++.+...  ++..++..            
T Consensus       156 -----------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  224 (256)
T d1ulua_         156 -----------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE  224 (256)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH
Confidence                       77899999999999999999999999999999999999999876643  22322221            


Q ss_pred             -HHHHHHHHHhhccccccccccccc
Q psy2854         269 -IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 -~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       +.....|+++..++++++..+..|
T Consensus       225 dvA~~v~fL~S~~s~~itG~~i~VD  249 (256)
T d1ulua_         225 EVGNLGLFLLSPLASGITGEVVYVD  249 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhCCccCCeEEEC
Confidence             111335666666777777776654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.6e-39  Score=291.84  Aligned_cols=211  Identities=13%  Similarity=0.088  Sum_probs=176.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      |+|||||++|||+++|++|+++|++|++++|+.++.++... ....       +.++|++|.++++++++++.+++|+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~-~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-hhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            89999999999999999999999999999999877665433 2222       246899999999999999999999999


Q ss_pred             EEEECCCCCC-CCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCcccC
Q psy2854         138 VLINNAGVSV-PIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGFVQK  211 (384)
Q Consensus       138 ~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  211 (384)
                      +||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+     +||++||..+..+.+              
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~--------------  139 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK--------------  139 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT--------------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc--------------
Confidence            9999999854 46788899999999999999999999999999996     699999998877765              


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--------hHHHHHHH-------------HH
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--------IKFYQKVM-------------IF  270 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------~~~~~~~~-------------~~  270 (384)
                        ...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+...        ++..+...             +.
T Consensus       140 --~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA  217 (252)
T d1zmta1         140 --ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELG  217 (252)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHH
T ss_pred             --cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence              67899999999999999999999999999999999999999976542        12222211             11


Q ss_pred             HHHHHHHhhccccccccccccc
Q psy2854         271 PIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       271 ~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ....|+++..++++++..+..|
T Consensus       218 ~~v~fL~S~~s~~iTG~~i~vd  239 (252)
T d1zmta1         218 ELVAFLASGSCDYLTGQVFWLA  239 (252)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEES
T ss_pred             HHHHHHhCchhcCCcCCeEEEC
Confidence            2335666667777887777654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.4e-39  Score=284.80  Aligned_cols=206  Identities=17%  Similarity=0.161  Sum_probs=169.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++           ....++.||+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999998644322           1234678999864      45566788


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++|+++|+|+     +||+++|..+..+.+           
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~-----------  133 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE-----------  133 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc-----------
Confidence            9999999999998888899999999999999999999999999999996     699999988776655           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHH--------------HHHHHH
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVM--------------IFPIAM  274 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~--------------~~~~~~  274 (384)
                           ....|++||+|+.+|+++++.|++++|||||+|+||+++|++.+....+...+.+              +.....
T Consensus       134 -----~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~  208 (234)
T d1o5ia_         134 -----NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVA  208 (234)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             -----ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                 7789999999999999999999999999999999999999997653322222211              122345


Q ss_pred             HHHhhccccccccccccc
Q psy2854         275 MVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       275 ~~~~s~s~~~~~~~i~f~  292 (384)
                      |+++..++++++..+..|
T Consensus       209 fL~S~~s~~itG~~i~vD  226 (234)
T d1o5ia_         209 FLCSEKASYLTGQTIVVD  226 (234)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHhChhhcCCcCcEEEEC
Confidence            666666777777776553

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-39  Score=294.85  Aligned_cols=202  Identities=25%  Similarity=0.383  Sum_probs=170.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKL-KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..+++++.  +.++.+++||++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999986 899999999999999999999876  467889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC---------
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN---------  203 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~---------  203 (384)
                      ||+||||||+....+..+.+.++|++++++|++|++++++.++|+|+   +||+++|..+..+.+...+..         
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            99999999998888888888899999999999999999999999997   799999987764432111000         


Q ss_pred             ----------------cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCC----CCcEEEEEecCcccCCccccCc
Q psy2854         204 ----------------GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD----KGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       204 ----------------~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~----~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                                      ..........+..+|++||+++.+|++.+++|+++    .||+||+|+||+|+|+|.+...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~  238 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA  238 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc
Confidence                            00000111124567999999999999999998864    5999999999999999987654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.4e-37  Score=284.41  Aligned_cols=224  Identities=17%  Similarity=0.211  Sum_probs=186.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..++||++|.++++++++.+.+
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhh
Confidence            47999999999999999999999999999999999999999999999888765 56788999999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNGE  205 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~~  205 (384)
                      +++++|+||||||.....++.+.+.+++++.+.+|..+.+.+.+...+.+.      .+++++|..+..+.+        
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~--------  171 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------  171 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc--------
Confidence            999999999999998888888889999999999999999999888776653      477777777666554        


Q ss_pred             cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc---hHHHHHHH-------------H
Q psy2854         206 KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD---IKFYQKVM-------------I  269 (384)
Q Consensus       206 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~-------------~  269 (384)
                              +..+|++||+|+++|+++++.|++++|||||+|+||+|+|++.....   ....++..             +
T Consensus       172 --------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi  243 (294)
T d1w6ua_         172 --------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL  243 (294)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred             --------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHH
Confidence                    67789999999999999999999999999999999999999875431   22222221             1


Q ss_pred             HHHHHHHHhhccccccccccccc
Q psy2854         270 FPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       270 ~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      .....|++...+.+++|..+..|
T Consensus       244 A~~v~fL~sd~s~~itG~~i~vD  266 (294)
T d1w6ua_         244 ANLAAFLCSDYASWINGAVIKFD  266 (294)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhCchhcCCCCcEEEEC
Confidence            22445666666777788777665

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.4e-37  Score=278.80  Aligned_cols=189  Identities=20%  Similarity=0.271  Sum_probs=163.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHH---HCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH-
Q psy2854          56 GKVCIITGANSGIGYETAKELA---KLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK-  131 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~---~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~-  131 (384)
                      -|+||||||++|||+++|++|+   ++|++|++++|+.+++++.. ++.+.  ..++.+++||++|+++++++++++.+ 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            3799999999999999999996   57999999999999887754 44443  46899999999999999999999854 


Q ss_pred             -hCCCccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----------------cEEEEcCcccc
Q psy2854         132 -QYPKIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----------------KVVIVGSSLMD  193 (384)
Q Consensus       132 -~~g~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----------------~iv~vsS~~~~  193 (384)
                       +++++|+||||||+.... +..+.+.++|++++++|+.|++.+++.++|+|+                ++|+++|..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence             678999999999986554 567789999999999999999999999999984                48999998776


Q ss_pred             cCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc
Q psy2854         194 RGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD  260 (384)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  260 (384)
                      .+...             .+++.+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.+...
T Consensus       159 ~~~~~-------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         159 IQGNT-------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             STTCC-------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred             cCCCC-------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence            43221             1167799999999999999999999999999999999999999987653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-38  Score=283.25  Aligned_cols=187  Identities=21%  Similarity=0.202  Sum_probs=174.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++||+|||||||+|||+++|++|+++|++|++++|+.+++++..+++.... +.....+.+|+++.+++....+.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999888876653 5678889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                      |.+|+++||||.....++.+.+.++|++++++|+.|++.+++.++|+|+    +||++||.++..+.+            
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p------------  158 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP------------  158 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT------------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCC------------
Confidence            9999999999998888888889999999999999999999999999997    699999999887776            


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  257 (384)
                          +..+|++||+|+++|+++|+.|++  +.||+|++|+||+|+|+|.+
T Consensus       159 ----~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~  204 (269)
T d1xu9a_         159 ----MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM  204 (269)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHH
Confidence                788999999999999999999987  45799999999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-38  Score=288.13  Aligned_cols=186  Identities=22%  Similarity=0.263  Sum_probs=157.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEE---EEecCchhHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVV---LGCRSMIRGQEALEKLKKE-VQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi---~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .|+||||||++|||+++|++|+++|++|+   .++|+.+..++..+...+. ..+.++..++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            57999999999999999999999999854   4456555444443333332 2356899999999999999999988743


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCCCCcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDNLNGEK  206 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~~~~~~  206 (384)
                        |++|+||||||.....++.+.+.++|++++++|+.|+++++++++|+|+     +||++||.++..+.+         
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~---------  150 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---------  150 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT---------
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC---------
Confidence              8999999999998888899999999999999999999999999999996     699999999988776         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                             +...|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.++.
T Consensus       151 -------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         151 -------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHh
Confidence                   7789999999999999999999999999999999999999998654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.9e-37  Score=277.10  Aligned_cols=192  Identities=26%  Similarity=0.352  Sum_probs=154.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.+++++..    +. .+.++++++||++|.++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-hCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999996  6899999988776533    22 256899999999999999999999998


Q ss_pred             hCC--CccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----------------cEEEEcCccc
Q psy2854         132 QYP--KIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----------------KVVIVGSSLM  192 (384)
Q Consensus       132 ~~g--~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----------------~iv~vsS~~~  192 (384)
                      .++  ++|+||||||+..+ .+..+.+.++|++++++|+.|++++++.++|+|+                ++++++|...
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            876  49999999998654 5677789999999999999999999999999984                3667776655


Q ss_pred             ccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccC
Q psy2854         193 DRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHA  259 (384)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  259 (384)
                      ......     ...+    ..+..+|++||+|+.+|+++|+.|++++||+|++|+||+|+|+|.+..
T Consensus       156 ~~~~~~-----~~~~----~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         156 SITDNT-----SGSA----QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             CSTTCC-----STTS----SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------
T ss_pred             cccCCc-----cccc----chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC
Confidence            433221     0011    115568999999999999999999999999999999999999997654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=272.01  Aligned_cols=213  Identities=18%  Similarity=0.244  Sum_probs=171.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||+||||||++|||+++|++|+++|++|++++|+++++++.    .+   ...+....+|+++.+.++    +..+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~----~~---~~~~~~~~~d~~~~~~~~----~~~~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----EK---YPGIQTRVLDVTKKKQID----QFANE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----GG---STTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----Hh---ccCCceeeeecccccccc----ccccc
Confidence            48999999999999999999999999999999999997655443    22   245777888988766554    44556


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCccccc-CCcCcCCCCcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDR-GTIDFDNLNGEK  206 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~-~~~~~~~~~~~~  206 (384)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.     +||+++|..+.. +.+         
T Consensus        72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~---------  142 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV---------  142 (245)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT---------
T ss_pred             cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc---------
Confidence            78999999999998888899999999999999999999999999999886     799999987643 333         


Q ss_pred             CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc-----hHHHHHHH-------------
Q psy2854         207 GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD-----IKFYQKVM-------------  268 (384)
Q Consensus       207 ~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~~-------------  268 (384)
                             ...+|++||+|+++|+|+|+.|++++|||||+|+||+++|++.+...     .....+.+             
T Consensus       143 -------~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  215 (245)
T d2ag5a1         143 -------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE  215 (245)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHH
Confidence                   67899999999999999999999999999999999999999875421     11111111             


Q ss_pred             -HHHHHHHHHhhccccccccccccc
Q psy2854         269 -IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 -~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                       ......|++...+.++++..+..|
T Consensus       216 dva~~v~fL~s~~s~~iTG~~i~VD  240 (245)
T d2ag5a1         216 EIAMLCVYLASDESAYVTGNPVIID  240 (245)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEC
T ss_pred             HHHHHHHHHhChhhCCCcCceEEeC
Confidence             122445666666777777666543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-36  Score=267.45  Aligned_cols=189  Identities=23%  Similarity=0.305  Sum_probs=165.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.......+|+.+.+++++..+++..
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCccccccccccccccccccccccc
Confidence            3689999999999999999999999999999999999998888877766     45788899999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCC------CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCccccc
Q psy2854         132 QYPKIHVLINNAGVSVPI------KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDR  194 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~  194 (384)
                      ..+.+|.+++|+++....      +..+.+.++|++++++|+.+++++++++.|+|.           +||++||..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            999999999999875433      345668899999999999999999999999864           499999999887


Q ss_pred             CCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch
Q psy2854         195 GTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI  261 (384)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  261 (384)
                      +.+                +.++|++||+|+++|+++|+.|++++|||||+|+||+++|+|....++
T Consensus       156 ~~~----------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~  206 (248)
T d2o23a1         156 GQV----------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE  206 (248)
T ss_dssp             CCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             CCC----------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH
Confidence            766                778999999999999999999999999999999999999999876554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.4e-33  Score=257.81  Aligned_cols=217  Identities=15%  Similarity=0.207  Sum_probs=163.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHHHhcCCcEEEE-----------------EeecCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSM-IRGQEALEKLKKEVQDGQIVLM-----------------ELNLAS  118 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~-----------------~~Dvs~  118 (384)
                      .+||||||++|||+++|++|+++|++|++++|+. ++.++..+++.+.. +.....+                 .+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhc-CCceEEEEeecccccccccccccccccCCC
Confidence            4899999999999999999999999999987764 44555666666554 2334444                 456999


Q ss_pred             HHHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHH--------------HHhchhhhHHHHHHHHHHHhcC--
Q psy2854         119 FDSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYE--------------VHFGINHVGHFLLTNLLIERIQ--  182 (384)
Q Consensus       119 ~~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~--------------~~~~vN~~~~~~l~~~~~~~l~--  182 (384)
                      +++++++++++.+++|++|+||||||+..+.++.+.+.++|+              ..+++|+.+++++++.+.+.+.  
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999999887777776666554              4789999999999999887632  


Q ss_pred             ---------cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         183 ---------KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       183 ---------~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                               +|++++|.....+.+                +..+|++||+|+.+|+++++.|++++|||||+|+||++.|
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~  225 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLL----------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  225 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HHHhcCCCCcccccccccccCCcc----------------ceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence                     477888877666554                7789999999999999999999999999999999998655


Q ss_pred             CccccCchHHHHHHH--------------HHHHHHHHHhhccccccccccccc
Q psy2854         254 NLFRHADIKFYQKVM--------------IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       254 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      .  ....++..++..              +.....|++...++++++..+..|
T Consensus       226 ~--~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VD  276 (284)
T d1e7wa_         226 V--DDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  276 (284)
T ss_dssp             G--GGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             c--ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEEC
Confidence            4  333333332221              122335666666677777766554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-33  Score=250.33  Aligned_cols=220  Identities=15%  Similarity=0.143  Sum_probs=177.9

Q ss_pred             CCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |+||++|||||+|  |||+++|+.|+++|++|++++|+++. .+..+++...  .++...+++|+++..++...++++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT-HHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence            7899999999998  89999999999999999999998654 4444555444  35667789999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCC-----CCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCC
Q psy2854         132 QYPKIHVLINNAGVSVPIKE-----KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLN  203 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~  203 (384)
                      .++++|++||||+.......     .....+.|...+++|+.+.+.+++.+.|.++   .|+++||..+..+.+      
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~------  153 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------  153 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC------
Confidence            99999999999998654433     2346677999999999999999999999987   588888887776655      


Q ss_pred             cCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchH--HHHHHH-------------
Q psy2854         204 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIK--FYQKVM-------------  268 (384)
Q Consensus       204 ~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~-------------  268 (384)
                                ....|++||+|+++|+++++.|++++|||||+|+||+|+|++.+.....  ..+...             
T Consensus       154 ----------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pee  223 (258)
T d1qsga_         154 ----------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIED  223 (258)
T ss_dssp             ----------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHH
Confidence                      6678999999999999999999999999999999999999998765421  222111             


Q ss_pred             HHHHHHHHHhhccccccccccccc
Q psy2854         269 IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 ~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      +.....|++...++++++..+..|
T Consensus       224 ia~~v~fL~s~~s~~itG~~i~vD  247 (258)
T d1qsga_         224 VGNSAAFLCSDLSAGISGEVVHVD  247 (258)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCchhcCccCceEEEC
Confidence            112335566666677777666554

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.2e-34  Score=254.74  Aligned_cols=176  Identities=13%  Similarity=0.072  Sum_probs=152.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-  133 (384)
                      +||+||||||++|||+++|++|+++|++|++++++....            ......+.+|.++.++++.+.+.+.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875321            2345567788888888888888887754 


Q ss_pred             -CCccEEEECCCCCCC-CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCc
Q psy2854         134 -PKIHVLINNAGVSVP-IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGF  208 (384)
Q Consensus       134 -g~id~lvnnAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~  208 (384)
                       +++|+||||||.... .+..+.+.++|++++++|+.+++++++.++|+|+   +||++||.++..+.+           
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-----------  137 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP-----------  137 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-----------
Confidence             479999999997444 3455667789999999999999999999999998   799999998877765           


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCcccc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~  258 (384)
                           +..+|++||+|+++|+++|+.|++  ++||+||+|+||+++|+|.+.
T Consensus       138 -----~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~  184 (236)
T d1dhra_         138 -----GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK  184 (236)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHH
T ss_pred             -----CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchh
Confidence                 778999999999999999999998  579999999999999999754

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.4e-33  Score=257.89  Aligned_cols=186  Identities=13%  Similarity=0.192  Sum_probs=152.5

Q ss_pred             CCCEEEEeC--CCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc----------CCcEEEEE---------
Q psy2854          55 EGKVCIITG--ANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ----------DGQIVLME---------  113 (384)
Q Consensus        55 ~~k~vlITG--as~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~---------  113 (384)
                      .+|++||||  +++|||+++|++|+++|++|++++++............+...          ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  568999999999999999999999887654444333222111          01122333         


Q ss_pred             -----------eecCCHHHHHHHHHHHHHhCCCccEEEECCCCCCC--CCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         114 -----------LNLASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP--IKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       114 -----------~Dvs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                                 +|+++.++++++++++.+++|+||+||||||....  +++.+.+.++|++++++|+.+.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       36668888999999999999999999999997543  46788899999999999999999999999999


Q ss_pred             cC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCc
Q psy2854         181 IQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYAD-KGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       181 l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~-~gI~v~~v~PG~v~T~~  255 (384)
                      |+   +||++||.++..+.+.               ....|++||+|+++|+++|+.|+++ +|||||+|+||+|+|+.
T Consensus       161 m~~~GsIv~iss~~~~~~~p~---------------y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a  224 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPG---------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTT---------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTT
T ss_pred             cccccccccceeehhcccccc---------------cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchh
Confidence            97   7999999887766542               2457999999999999999999986 69999999999999953

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1e-32  Score=244.91  Aligned_cols=174  Identities=14%  Similarity=0.027  Sum_probs=148.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH--hCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK--QYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~--~~g  134 (384)
                      ++||||||++|||+++|++|+++|++|++++|++++.            ........+|+++.++.....+.+.+  ++|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            4579999999999999999999999999999986421            13445567888888888777777766  468


Q ss_pred             CccEEEECCCCCCCC-CCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         135 KIHVLINNAGVSVPI-KEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       135 ~id~lvnnAG~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      +||+||||||+.... +..+.+.+.|+.++++|+.+++.++++++|+|+   +||++||..+..+.+             
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-------------  137 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-------------  137 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-------------
Confidence            999999999985543 444556688999999999999999999999998   699999998887765             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCcccc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYA--DKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~  258 (384)
                         ++.+|++||+|+++|+++|+.|++  +.||+|++|+||+++|++.+.
T Consensus       138 ---~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~  184 (235)
T d1ooea_         138 ---SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK  184 (235)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred             ---cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh
Confidence               778999999999999999999998  579999999999999998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.98  E-value=5.1e-32  Score=248.95  Aligned_cols=226  Identities=15%  Similarity=0.120  Sum_probs=169.5

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcC----------CcEEEEEee----
Q psy2854          52 KPMEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD----------GQIVLMELN----  115 (384)
Q Consensus        52 ~~~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~----------~~~~~~~~D----  115 (384)
                      .+|+||++|||||+|  |||+++|++|+++|++|++++|+.................          ..-....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            689999999999875  9999999999999999999999765443333222111100          011233343    


Q ss_pred             ----------------cCCHHHHHHHHHHHHHhCCCccEEEECCCCCC--CCCCCCCChhhHHHHhchhhhHHHHHHHHH
Q psy2854         116 ----------------LASFDSIKNFAKNVMKQYPKIHVLINNAGVSV--PIKEKLTTKEGYEVHFGINHVGHFLLTNLL  177 (384)
Q Consensus       116 ----------------vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  177 (384)
                                      .++..+++++++++.+++|+||+||||||...  ..++.+.+.++|++++++|+.+++.+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            35566778999999999999999999999853  457788899999999999999999999999


Q ss_pred             HHhcC---cEEEEcCcccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhC-CCCcEEEEEecCcccC
Q psy2854         178 IERIQ---KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYA-DKGVDVSVVCPGWCYT  253 (384)
Q Consensus       178 ~~~l~---~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~-~~gI~v~~v~PG~v~T  253 (384)
                      +|.+.   +++++++.........               ....|+++|+++.++++.++.|++ ++|||||+|+||+++|
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~---------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T  228 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPG---------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTT---------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             HHHhhcCCcceeeeehhhcccccc---------------cccceecccccccccccccchhccccceEEecccccccccc
Confidence            99987   4666666554433221               556899999999999999999996 6799999999999999


Q ss_pred             CccccCch--HHHHHHH-------------HHHHHHHHHhhccccccccccccc
Q psy2854         254 NLFRHADI--KFYQKVM-------------IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       254 ~~~~~~~~--~~~~~~~-------------~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                      ++.+....  ++.+...             +.....|+++..++++++..+..|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vD  282 (297)
T d1d7oa_         229 RAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVD  282 (297)
T ss_dssp             CCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEEC
Confidence            99876432  2222211             122345666666777787776654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.98  E-value=2.8e-31  Score=241.11  Aligned_cols=221  Identities=15%  Similarity=0.091  Sum_probs=165.6

Q ss_pred             CCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANS--GIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~--GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |+||++|||||+|  |||+++|++|+++|++|++++|++ ++++..+++.+.  .....+.++|++++++++++++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHH
Confidence            7899999999865  999999999999999999999984 455566677665  35567789999999999999999999


Q ss_pred             hCCCccEEEECCCCCCCCCCC----CCChhhHHHHhchhhhHHHHHHHHHHHhcC---cEEEEcCcccccCCcCcCCCCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEK----LTTKEGYEVHFGINHVGHFLLTNLLIERIQ---KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~---~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+|++|++|||+|........    +...+.+...+.++..+.....+...+..+   .|++++|.+...+.+       
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-------  152 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA-------  152 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccc-------
Confidence            999999999999985543322    233444555555556666666666666554   355555554444333       


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCch-HHHHHHH--------------H
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADI-KFYQKVM--------------I  269 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~--------------~  269 (384)
                               ....|++||+|+.+++++++.|++++|||||+|+||+++|++...... +......              +
T Consensus       153 ---------~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedI  223 (274)
T d2pd4a1         153 ---------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEV  223 (274)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ---------cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHH
Confidence                     667899999999999999999999999999999999999999876542 2222111              1


Q ss_pred             HHHHHHHHhhcccccccccccccc
Q psy2854         270 FPIAMMVVIVGSSLMDRGTIDFDN  293 (384)
Q Consensus       270 ~~~~~~~~~s~s~~~~~~~i~f~~  293 (384)
                      ..+..|+++..+.++++..+..|.
T Consensus       224 A~~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         224 GNAGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhChhhCCCcCceEEECC
Confidence            123356666667777877776543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.97  E-value=8.6e-31  Score=236.76  Aligned_cols=217  Identities=20%  Similarity=0.209  Sum_probs=165.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHHhcCCcEEEEEeecCC----HHHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKEVQDGQIVLMELNLAS----FDSIKNFAKNVMK  131 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dvs~----~~~v~~~~~~i~~  131 (384)
                      .++|||||++|||+++|++|+++|++|++++|+.++. ++..+++.+.. +.+....++|+.+    .+.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            3899999999999999999999999999999997654 55666666554 4567777766654    5677888888999


Q ss_pred             hCCCccEEEECCCCCCCCCCCC-----------CChhhHHHHhchhhhHHHHHHHHHHHhcC----------cEEEEcCc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKL-----------TTKEGYEVHFGINHVGHFLLTNLLIERIQ----------KVVIVGSS  190 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~-----------~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----------~iv~vsS~  190 (384)
                      ++|++|+||||||+..+.+..+           ...+.+...+..|+.+++...+...+.+.          .+++++|.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9999999999999876554322           23455777889999999999988887764          36677776


Q ss_pred             ccccCCcCcCCCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHH---
Q psy2854         191 LMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKV---  267 (384)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---  267 (384)
                      .+..+.+                ++..|++||+|+++++++++.|++++|||||+|+||+++|++....  +..+..   
T Consensus       161 ~~~~~~~----------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~--~~~~~~~~~  222 (266)
T d1mxha_         161 MTDLPLP----------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ--ETQEEYRRK  222 (266)
T ss_dssp             GGGSCCT----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH--HHHHHHHTT
T ss_pred             cccccCc----------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH--HHHHHHHhc
Confidence            6655554                7889999999999999999999999999999999999999875432  121111   


Q ss_pred             -----------HHHHHHHHHHhhccccccccccccc
Q psy2854         268 -----------MIFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       268 -----------~~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                                 -......|+++..+.++++..+..|
T Consensus       223 ~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vD  258 (266)
T d1mxha_         223 VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVD  258 (266)
T ss_dssp             CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEEC
Confidence                       1222345666666677777666554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.97  E-value=5.2e-31  Score=238.54  Aligned_cols=185  Identities=14%  Similarity=0.099  Sum_probs=154.0

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGA--NSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGa--s~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+.++..+.   +.++. +.+...++||++++++++++++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITDRL-PAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHHHc-CCceeeEeeecccccccccccchhh
Confidence            378999999994  57999999999999999999999998665433   33332 4567789999999999999999987


Q ss_pred             Hh---CCCccEEEECCCCCCC-----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcC
Q psy2854         131 KQ---YPKIHVLINNAGVSVP-----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       131 ~~---~g~id~lvnnAG~~~~-----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~  200 (384)
                      +.   ++.+|++|||||+...     .++.+.+.+++.+.+++|..+.+...+...+.+.  .+++++|.....+.+   
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p---  155 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP---  155 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT---
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc---
Confidence            76   4679999999997532     2445678899999999999999999999888776  355555554444443   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                                   .+..|++||+|+.+|+++++.|++++|||||+|+||+++|++.+
T Consensus       156 -------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~  199 (268)
T d2h7ma1         156 -------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS  199 (268)
T ss_dssp             -------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHH
T ss_pred             -------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhh
Confidence                         67799999999999999999999999999999999999999864

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.6e-30  Score=231.48  Aligned_cols=179  Identities=21%  Similarity=0.234  Sum_probs=152.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|+||||||++|||+++|++|+++|++|++++|+.+              ..+....++|+++......+.+...+... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcccc-
Confidence            489999999999999999999999999999999854              24567789999999999999888877754 


Q ss_pred             ccEEEECCCCCCC----CCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----------cEEEEcCcccccCCcCcC
Q psy2854         136 IHVLINNAGVSVP----IKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----------KVVIVGSSLMDRGTIDFD  200 (384)
Q Consensus       136 id~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----------~iv~vsS~~~~~~~~~~~  200 (384)
                      .+.++++++....    ......+.+.|++++++|+.+++.+++.+.+.+.           +||++||..+..+.+   
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---  142 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---  142 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC---
Confidence            5556666665332    2344567889999999999999999999988742           699999999887766   


Q ss_pred             CCCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHH
Q psy2854         201 NLNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQ  265 (384)
Q Consensus       201 ~~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~  265 (384)
                                   +..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+....+...
T Consensus       143 -------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~  194 (241)
T d1uaya_         143 -------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA  194 (241)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH
T ss_pred             -------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHH
Confidence                         7789999999999999999999999999999999999999998776654433

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=1e-29  Score=228.78  Aligned_cols=177  Identities=16%  Similarity=0.106  Sum_probs=151.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM---IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.  +.++.++.||++|.++++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            57999999999999999999999999 589999974   3445555665543  57899999999999999999998865


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      . +++|.+|||||.....++.+.+.++|+.++++|+.+++++.+.+.+... ++|++||.++..+.+             
T Consensus        87 ~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~-------------  152 (259)
T d2fr1a1          87 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-------------  152 (259)
T ss_dssp             T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-------------
T ss_pred             c-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc-------------
Confidence            4 6899999999998889999999999999999999999999988766543 799999999988876             


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                         +++.|+++|+++++|++.++.    .|++|++|+||.+.++.
T Consensus       153 ---~~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         153 ---GLGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSG  190 (259)
T ss_dssp             ---TCTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC---
T ss_pred             ---ccHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCc
Confidence               778999999999988877665    49999999999886543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=8.8e-28  Score=215.70  Aligned_cols=210  Identities=17%  Similarity=0.186  Sum_probs=139.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-PK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g~  135 (384)
                      |+||||||++|||+++|++|+++|++|++++|+.++                   ..+|+++.+..+....++..+. +.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999999997431                   3579999998888766665554 57


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-----cEEEEcCcccccCCcCcCC---------
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-----KVVIVGSSLMDRGTIDFDN---------  201 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-----~iv~vsS~~~~~~~~~~~~---------  201 (384)
                      +|++|||||+..       ..+.++....+|..+...+.+...+.+.     .+.++.+.....-......         
T Consensus        63 id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          63 MDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             CSEEEECCCCCT-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             CcEEEEcCCCCC-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            999999999743       3355778889999999999998888764     3445544432211110000         


Q ss_pred             ---CCcCcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCc--hHHHHHHH--------
Q psy2854         202 ---LNGEKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHAD--IKFYQKVM--------  268 (384)
Q Consensus       202 ---~~~~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~--------  268 (384)
                         +.+..+.....++..+|++||+|+++|+|+++.|++++|||||+|+||+++|++.+...  ++..+...        
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR  215 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGR  215 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTS
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCC
Confidence               00000000011144579999999999999999999999999999999999999976532  11111111        


Q ss_pred             ------HHHHHHHHHhhccccccccccccc
Q psy2854         269 ------IFPIAMMVVIVGSSLMDRGTIDFD  292 (384)
Q Consensus       269 ------~~~~~~~~~~s~s~~~~~~~i~f~  292 (384)
                            +.....||++..++++++..+..|
T Consensus       216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vD  245 (257)
T d1fjha_         216 RAEPSEMASVIAFLMSPAASYVHGAQIVID  245 (257)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEeC
Confidence                  122335666666777777766553

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=2.5e-21  Score=165.23  Aligned_cols=150  Identities=15%  Similarity=0.086  Sum_probs=112.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..   ++....+|++|.+++++++     
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh-----
Confidence            47999999999999999999999999999999999999999999888887653   4556889999999887654     


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                        +++|+||||||+..    ...+.++|+..+++|+.+.++....+.+.+.    ....+++........          
T Consensus        91 --~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------  154 (191)
T d1luaa1          91 --KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG----------  154 (191)
T ss_dssp             --TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHH----------
T ss_pred             --cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccC----------
Confidence              68999999999742    3458899999999998877765543332221    222222222211100          


Q ss_pred             cccCCCChhhhhhcHHHHHHHHH
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGA  230 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~  230 (384)
                           .+...|+++|+++..+++
T Consensus       155 -----~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         155 -----IGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             -----HHHHHHHHHHHHHHHHTS
T ss_pred             -----cCcHHHHHHHHHHHHHHh
Confidence                 034579999999887764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.6e-18  Score=162.11  Aligned_cols=184  Identities=16%  Similarity=0.077  Sum_probs=134.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHHH--hcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRG-QEALEKLKKE--VQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~--~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |+||||||+|.||.+++++|+++|++|++++|..... .+..+.+...  ....++.++++|++|.++++++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            7999999999999999999999999999999854221 1112222111  12467999999999999999998875    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                       .+|+++|.|+......    +.++.+..+++|+.|+.++++++...-.    ++|++||...+ |.+...++++.... 
T Consensus        78 -~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vY-G~~~~~~~~E~~~~-  150 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY-GLVQEIPQKETTPF-  150 (357)
T ss_dssp             -CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG-TTCCSSSBCTTSCC-
T ss_pred             -CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhh-CCCCCCCcCCCCCC-
Confidence             7899999999855432    3345566889999999999999876432    58888887654 33333334443322 


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         .+...|+.||.+.+.+++.+++.+   |+++..++|+.+..|...
T Consensus       151 ---~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~  192 (357)
T d1db3a_         151 ---YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRG  192 (357)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSC
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCC
Confidence               256689999999999999998875   799999999999998643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=5.5e-17  Score=150.39  Aligned_cols=182  Identities=13%  Similarity=0.072  Sum_probs=134.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .+|||||+|-||.+++++|+++|++|++++|............... ...++.++++|++|.+.++++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            4999999999999999999999999999876432222222222221 2467999999999999998887753     689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCChh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNP  216 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (384)
                      ++||.|+......    +.++.+..+++|+.|+.++++++...- +++|++||.+.+.+...... .....   ...+..
T Consensus        76 ~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~-~e~~~---~~~p~~  147 (338)
T d1udca_          76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPY-VESFP---TGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSB-CTTSC---CCCCSS
T ss_pred             EEEECCCccchhh----HHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccc-ccccc---cCCCcc
Confidence            9999999643211    334556789999999999999998764 47888888776654432221 11111   112567


Q ss_pred             hhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         217 AYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       217 ~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .|+.+|.+.+.+.+....+.  .++.+..++|+.+..+.
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred             hHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence            89999999999998877763  47899999999888764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=1.4e-16  Score=148.20  Aligned_cols=183  Identities=18%  Similarity=0.155  Sum_probs=132.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |+||||||+|.||.+++++|+++|++|+++++......+........ ...++.++++|++|.++++++.+..     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL-TKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH-HTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh-cccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            78999999999999999999999999999876332211222222211 2457888999999999999887643     69


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCc---CCCCcCcCcccCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDF---DNLNGEKGFVQKG  212 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~---~~~~~~~~~~~~~  212 (384)
                      |++||+|+......    ..+..+....+|+.|+.++++++...- +++|++||...+......   .++.+....    
T Consensus        76 d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~----  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL----  147 (347)
T ss_dssp             CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC----
T ss_pred             CEEEEccccccccc----cccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCC----
Confidence            99999999743221    233446678899999999999998765 479999998876543321   122222211    


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      .+...|+.||.+.+.+++.+.... ..++++..++|+.+..+
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence            255689999999999998887653 45788999988877643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=5.3e-16  Score=146.57  Aligned_cols=190  Identities=14%  Similarity=0.103  Sum_probs=133.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----------------chhHHHHHHHHHHHhcCCcEEEEEeecCCH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRS----------------MIRGQEALEKLKKEVQDGQIVLMELNLASF  119 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~  119 (384)
                      |+.|+||||+|-||.+++++|+++|++|++++.-                .....+........ .+.++.++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL-TGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-HCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh-cCCCcEEEEccCCCH
Confidence            6899999999999999999999999999988621                11112222222222 246789999999999


Q ss_pred             HHHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcC
Q psy2854         120 DSIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTID  198 (384)
Q Consensus       120 ~~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~  198 (384)
                      +.++++++..     ++|+++|.|+..... ....+.+.....+.+|+.|+.++++.+...-. +.++.+|+....+...
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~  153 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN  153 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS
T ss_pred             HHHHHHHHhh-----cchheeccccccccc-cccccccccccccccccccccHHHHHHHHhccccceeeccccccccccc
Confidence            9999998865     799999999874322 22235566778899999999999999887654 3444444444433322


Q ss_pred             cCCCCcCc----------CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         199 FDNLNGEK----------GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       199 ~~~~~~~~----------~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .. ..+..          ....+..+...|+.||.+.+.+++.++++.   |+++.+++|+.+..+..
T Consensus       154 ~~-~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         154 ID-IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             SC-BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cc-cccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            11 11000          001112255679999999999999888775   89999999998887653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-16  Score=146.70  Aligned_cols=181  Identities=16%  Similarity=0.051  Sum_probs=131.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-----RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |+||||||+|.||.+++++|.++|++|+.++|...     +.+......... ...++.++.+|++|.+.+.++.+..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchhhHHHHhhc--
Confidence            45699999999999999999999999999998542     122211111111 1357899999999999999988765  


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC----cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ----KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~----~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                         .+++++|.|+......    ..+.....+++|+.|+.++++++.....    ++|++||.+.+. .+...++++...
T Consensus        79 ---~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg-~~~~~~~~E~~~  150 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHVKI----SFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG-KVQEIPQKETTP  150 (347)
T ss_dssp             ---CCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTC-SCSSSSBCTTSC
T ss_pred             ---ccceeeeeeeccccch----hhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheec-CCCCCCCCCCCC
Confidence               6888999988643221    3345556789999999999998877543    688888876543 332233444332


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      .    .+...|+.||.+.+.+++.+++.+   ++.+..++|+.+..|-
T Consensus       151 ~----~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         151 F----YPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             C----CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             C----CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            2    256689999999999999988775   7899999999888874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.70  E-value=2.4e-16  Score=146.20  Aligned_cols=187  Identities=13%  Similarity=0.079  Sum_probs=132.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +||+|+||||+|.||.+++++|+++|++|+.+.|+.++...................+..|++|.+++.+++       .
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-------K   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-------T
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc-------c
Confidence            489999999999999999999999999999999987665544332222222334455778999998776554       3


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh--cCcEEEEcCcccccCCc-CcCCCCcC-c----
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER--IQKVVIVGSSLMDRGTI-DFDNLNGE-K----  206 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~iv~vsS~~~~~~~~-~~~~~~~~-~----  206 (384)
                      ..|+++|+|+....       .......+..|+.|+.++++.+...  .+++|++||..+..+.. ........ .    
T Consensus        83 ~~~~v~~~a~~~~~-------~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~  155 (342)
T d1y1pa1          83 GAAGVAHIASVVSF-------SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL  155 (342)
T ss_dssp             TCSEEEECCCCCSC-------CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred             cchhhhhhcccccc-------cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccc
Confidence            68999999986421       1123456778999999999998874  45899999876543222 11111000 0    


Q ss_pred             ---------CcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         207 ---------GFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       207 ---------~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                               .......+...|+.||.+.+.++..++++.. .++++.+++|+.+..|..
T Consensus       156 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~  213 (342)
T d1y1pa1         156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCS
T ss_pred             ccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCC
Confidence                     0011112456799999999999999988764 578999999998877754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=2.6e-16  Score=144.44  Aligned_cols=182  Identities=15%  Similarity=0.032  Sum_probs=134.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ-EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      |+||||||+|.||++++++|+++|++|+.++|...... +..+++   ....++.++.+|++|.+++.+.+...     .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   72 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA-----Q   72 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh---cccCCcEEEEccccChHHhhhhhccc-----c
Confidence            68999999999999999999999999999998754321 222222   22357899999999999998887765     6


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCcccCCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHS  214 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  214 (384)
                      .++++++|+......    ..+.....+..|+.|+.++++++...-. ++++.+|+....+.......++....    .+
T Consensus        73 ~~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~----~p  144 (321)
T d1rpna_          73 PQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF----YP  144 (321)
T ss_dssp             CSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC----CC
T ss_pred             ccccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCc----cc
Confidence            788888887643222    2234467889999999999999887654 45555555555554444444333222    25


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ...|+.||.+.+.+++.++.+.   ++++..+.|+.+..|...
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~  184 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRG  184 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSC
T ss_pred             cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCcc
Confidence            6789999999999999998875   789999999988887643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.1e-16  Score=141.64  Aligned_cols=179  Identities=13%  Similarity=0.091  Sum_probs=125.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |.|+||||+|-||++++++|+++|++|++++|......+...   ......++.....|+.+.            .+.++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWIGHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGTTCTTEEEEECCTTSC------------CCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---HhcCCCceEEEehHHHHH------------HHcCC
Confidence            789999999999999999999999999998864321111111   111223455555555332            12369


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcC-cCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGE-KGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~-~~~~~~~~~~  215 (384)
                      |++||.|+......    ..++.++.+++|+.|+.++++++...-.++|++||.+.+.. +...++.+. .....+..+.
T Consensus        67 d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~-~~~~~~~e~~~~~~~~~~p~  141 (312)
T d2b69a1          67 DQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD-PEVHPQSEDYWGHVNPIGPR  141 (312)
T ss_dssp             SEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBS-CSSSSBCTTCCCBCCSSSTT
T ss_pred             CEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecC-CCCCCCCccccCCCCCCCCc
Confidence            99999999744221    12344567899999999999998887778999999766543 222222221 1111222366


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcccc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRH  258 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  258 (384)
                      ..|+.||.+.+.+++.+++++   |+++..++|+.+..|....
T Consensus       142 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~  181 (312)
T d2b69a1         142 ACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHM  181 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCT
T ss_pred             cHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCC
Confidence            789999999999999999886   8999999999999886543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=4.2e-16  Score=145.70  Aligned_cols=187  Identities=14%  Similarity=0.102  Sum_probs=132.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .||||||+|.||.+++++|++.|++|+++.++..... ..+.+.......++.++++|++|.++++++++..     .+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-NLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-cHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            5899999999999999999999998655433321110 0111222223468999999999999999888754     799


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc----------CcEEEEcCcccccCCcCcCCCCcC--
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI----------QKVVIVGSSLMDRGTIDFDNLNGE--  205 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l----------~~iv~vsS~~~~~~~~~~~~~~~~--  205 (384)
                      ++||+|+......    +.++....+++|+.|+.++.+.+....          +++|++||.+.+............  
T Consensus        76 ~VihlAa~~~~~~----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          76 AVMHLAAESHVDR----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEEECCSCCCHHH----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEEECccccchhh----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999998743211    334556789999999999999887642          379999998766543321110000  


Q ss_pred             ---cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         206 ---KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       206 ---~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         ........+...|+.||.+.+.+++.++..+   |+++.+++|+.+..|...
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~  203 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCC
Confidence               0011122256789999999999999998876   899999999999987643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.65  E-value=1.3e-15  Score=140.65  Aligned_cols=183  Identities=17%  Similarity=0.061  Sum_probs=128.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI-----RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .|+||||||||.||.+++++|+++|++|+.++|...     +......... ......+.++.+|+++.+++.+.++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-NVNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhh-hccccceEEEEccccCHHHHHHHHhhh-
Confidence            379999999999999999999999999999998532     2211111111 112356889999999999998887754 


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC------cEEEEcCcccccCCcCcCCCCc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ------KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~------~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                          ++|++||.|+......    ..+.....+..|..+...++.++.....      +++..||.. ..+.. ...+.+
T Consensus        79 ----~~D~Vih~Aa~~~~~~----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~-~~~~~E  148 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHVAV----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGST-PPPQSE  148 (339)
T ss_dssp             ----CCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTS-CSSBCT
T ss_pred             ----ccchhhhccccccccc----cccCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccC-CCCCCC
Confidence                7999999999743221    3345567889999999998887764321      234444433 22221 122333


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ....    .+...|+.||.+.+.++..+++..   |+++..++|+.+..|...
T Consensus       149 ~~~~----~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         149 TTPF----HPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRG  194 (339)
T ss_dssp             TSCC----CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSC
T ss_pred             CCCC----CCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCC
Confidence            2222    266789999999999999988875   799999999999887643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.63  E-value=3.9e-15  Score=138.37  Aligned_cols=186  Identities=13%  Similarity=0.035  Sum_probs=136.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+||+||||||+|.||.+++++|+++|++|++++|+..+.....+....   ...+.++.+|++|++.+.++.+..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            4689999999999999999999999999999999987655444333211   346889999999999998887765    


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcC-cCCCCcCcCcccC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTID-FDNLNGEKGFVQK  211 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~  211 (384)
                       .+|+++|.|+......    +.+..+..+.+|+.|+..+++++...-. ++++.+|+........ .....+....   
T Consensus        79 -~~~~v~~~aa~~~~~~----~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---  150 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLVRL----SYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM---  150 (356)
T ss_dssp             -CCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB---
T ss_pred             -hhhhhhhhhccccccc----cccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc---
Confidence             7899999998743211    3455677899999999999999887643 4444444444333222 2222222222   


Q ss_pred             CCChhhhhhcHHHHHHHHHHHHHHhC------CCCcEEEEEecCcccCCc
Q psy2854         212 GHSNPAYCNSKLMNYYFGAELYLKYA------DKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       212 ~~~~~~Y~aSK~a~~~~~~~la~e~~------~~gI~v~~v~PG~v~T~~  255 (384)
                       .+...|+.+|.+.+.+.+.++.++.      ..++.+..++|+.+..|-
T Consensus       151 -~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         151 -GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             -CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence             1556899999999999998887764      247899999999887764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.62  E-value=5e-15  Score=137.05  Aligned_cols=185  Identities=15%  Similarity=0.060  Sum_probs=135.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE---VQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      ++.|++|||||+|.||.+++++|.++|++|+.++|.........+.+...   .....+.++.+|..|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            45689999999999999999999999999999987433222222222221   11257889999999988665432    


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                         ...+.++|.++......    +.++....+++|+.|+.++++++...-. ++|++||...+..... .++.+.... 
T Consensus        90 ---~~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~-~~~~E~~~~-  160 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSVPR----SINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG-LPKVEDTIG-  160 (341)
T ss_dssp             ---TTCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC-SSBCTTCCC-
T ss_pred             ---ccccccccccccccccc----cccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCC-CCccCCCCC-
Confidence               36788888887643211    4566677999999999999999987654 8999998877654332 223333222 


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                         .+...|+.||.+.+.+++.+++..   ++++..++|+.+.++...
T Consensus       161 ---~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         161 ---KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcC
Confidence               256789999999999999998876   799999999998877543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=3.7e-15  Score=136.21  Aligned_cols=167  Identities=16%  Similarity=0.111  Sum_probs=125.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .|.||||||+|.||++++++|+++|+.|+++++..                      .+|+.|.+.++++++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----C
Confidence            46899999999999999999999999988765431                      26899999888877643     6


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc-cCCC
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV-QKGH  213 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~-~~~~  213 (384)
                      +|.++|+|+......   .........+++|+.|+.++++++...- +++|++||.+.+.+... .++.+..... ...+
T Consensus        55 ~d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~-~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK-QPMAESELLQGTLEP  130 (315)
T ss_dssp             CSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCC-SSBCGGGTTSSCCCG
T ss_pred             CCEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCC-CCccCCccccCCCCC
Confidence            899999997643211   1234445578899999999999987764 47999999887654332 2233222111 1112


Q ss_pred             ChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         214 SNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       214 ~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      +...|+.||.+.+.+++.+.++.   |+++..++|+.+..|..
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            45679999999999999998876   89999999999988754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=8.5e-15  Score=135.71  Aligned_cols=182  Identities=15%  Similarity=0.105  Sum_probs=130.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEec------CchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCR------SMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      |.||||||+|-||.+++++|+++|++|+.++|      +.....+..+.+... ...++.++++|++|.++++++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeeccccccccccccc--
Confidence            67899999999999999999999999999864      222222223333222 256889999999999998887764  


Q ss_pred             HhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcc
Q psy2854         131 KQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFV  209 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~  209 (384)
                         ..+|+++|.|+......    +.++..+.+++|+.|+.++.+++...- ++++++||+........... .....  
T Consensus        80 ---~~~~~i~h~Aa~~~~~~----~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~-~~~~~--  149 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPL-DEAHP--  149 (346)
T ss_dssp             ---CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSB-CTTSC--
T ss_pred             ---cccccccccccccCcHh----hHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccc-ccccc--
Confidence               37889999999754221    334456788999999999999887654 47888887766544332111 11111  


Q ss_pred             cCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         210 QKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       210 ~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                       .......|+.+|.+.+...+.+++.  ..++....++|+.+.++
T Consensus       150 -~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         150 -TGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             -CCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             -ccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence             1114557999999999988887654  45788999999887765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=9.9e-15  Score=134.97  Aligned_cols=179  Identities=13%  Similarity=0.025  Sum_probs=130.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      .||||||+|.||++++++|+++| .+|+.+++...+.....       ...++.++++|+++.+++.+...   +   ++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~---~---~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHV---K---KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHH---H---HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHH---h---CC
Confidence            48999999999999999999999 58998887654322221       24679999999998876655332   1   48


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCC--cCcCcccCCCC
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLN--GEKGFVQKGHS  214 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~--~~~~~~~~~~~  214 (384)
                      |++||+|+......    ..+.....+.+|+.|+.++++.+...-.+.+++||...+.+......-.  ..........+
T Consensus        69 d~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p  144 (342)
T d2blla1          69 DVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKP  144 (342)
T ss_dssp             SEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCG
T ss_pred             Cccccccccccccc----cccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCC
Confidence            99999999854321    2344456899999999999999988777888888877665443221111  11112222235


Q ss_pred             hhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         215 NPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       215 ~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ...|+.||.+.+.+++.+++.+   |+++..++|..+..+-.
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~  183 (342)
T d2blla1         145 RWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  183 (342)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred             cchhhhcccchhhhhhhhhccc---CceeEEeeccccccccc
Confidence            6789999999999999998886   89999999998887643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=3.6e-15  Score=138.33  Aligned_cols=186  Identities=12%  Similarity=0.069  Sum_probs=129.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      -|.||||||||-||.+++++|.++|++|.+++++.-........+ ....+.++.++.+|++|.+.+.++.+       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            368999999999999999999999987655554310000000001 11224689999999999998887753       5


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCC-------CCcCcCc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDN-------LNGEKGF  208 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~-------~~~~~~~  208 (384)
                      .|.++|.|+......    ..++.+..+++|+.|+.+++..+...-.++|++||...+...+.-..       .......
T Consensus        74 ~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          74 ADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             CSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             hhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCccccccc
Confidence            788899998744321    22345568899999999999999888888888888876543221110       0001111


Q ss_pred             ccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         209 VQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       209 ~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .....+.+.|+.||.+.+.+++.+.++.   |+++.+++|+.+..|..
T Consensus       150 ~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~  194 (346)
T d1oc2a_         150 ETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ  194 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCC
Confidence            1122255689999999999999988875   89999999999988743

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=1.4e-14  Score=135.18  Aligned_cols=189  Identities=12%  Similarity=0.022  Sum_probs=134.2

Q ss_pred             cCCCCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Q psy2854          46 KASPFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        46 ~~~~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      ...+.|++ ++..|+||||+|-||.+++++|.++|++|++++|......      ...  .....+..+|+.+.+++.++
T Consensus         6 ~~~~~~~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~   76 (363)
T d2c5aa1           6 EREQYWPS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKV   76 (363)
T ss_dssp             CCCCSCTT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHH
T ss_pred             cccCcCCC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHH
Confidence            34556655 5667999999999999999999999999999887543210      001  13456778899988877655


Q ss_pred             HHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCc
Q psy2854         126 AKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+       .+|.+||.|+.......   ..+.....+.+|+.++..++.++...- +++|++||............-..
T Consensus        77 ~~-------~~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~  146 (363)
T d2c5aa1          77 TE-------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNV  146 (363)
T ss_dssp             HT-------TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             hh-------cCCeEeecccccccccc---cccccccccccccchhhHHHHhHHhhCcccccccccccccccccccccccc
Confidence            43       68999999987543221   234556688899999999999988765 47899998876654332111111


Q ss_pred             C--cCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         205 E--KGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       205 ~--~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      .  .....+..+...|+.||.+.+.+++.+.+++   |+++..++|+.+..+..
T Consensus       147 ~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~  197 (363)
T d2c5aa1         147 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  197 (363)
T ss_dssp             EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             ccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCC
Confidence            0  1111112255689999999999999988876   89999999999987653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.7e-14  Score=122.31  Aligned_cols=155  Identities=14%  Similarity=0.047  Sum_probs=109.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      |..|+++||||||+||++++++|+++|++|.+..|++++.+..        ....+.++.+|++|.+++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4568899999999999999999999999999999998764321        13568889999999998877654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                       +.|++||++|.......           .+++..+..++++++...- +++|++||..........            .
T Consensus        67 -~~d~vi~~~g~~~~~~~-----------~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------------~  122 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDLSP-----------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------P  122 (205)
T ss_dssp             -TCSEEEECCCCTTCCSC-----------CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------C
T ss_pred             -CCCEEEEEeccCCchhh-----------hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------------c
Confidence             57999999997432211           1345556666777666543 478888886544322110            0


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYT  253 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T  253 (384)
                      +....|...|.+.+.+.       ...|++.+.|+||.+..
T Consensus       123 ~~~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         123 PRLQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             GGGHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEEC
T ss_pred             ccccccchHHHHHHHHH-------HhcCCceEEEecceecC
Confidence            13345666666655432       24589999999998743

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.57  E-value=1.4e-13  Score=126.41  Aligned_cols=182  Identities=14%  Similarity=0.067  Sum_probs=126.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMI-RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      .||||||+|.||.+++++|+++|++|+++++-.. ...+....+..   ..++.++.+|++|.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999999998875322 12222233322   467899999999999999888765     68


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCc-----------
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNG-----------  204 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~-----------  204 (384)
                      |++||+|+......    ..++.+..+++|+.|+.++++++...-. +.++.||.....+.........           
T Consensus        74 d~Vih~aa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (338)
T d1orra_          74 DSCFHLAGQVAMTT----SIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  149 (338)
T ss_dssp             SEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             ceEEeecccccccc----cccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccc
Confidence            99999998743211    3345567899999999999998877644 5666666665554432211110           


Q ss_pred             -CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         205 -EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       205 -~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                       .........+...|+.+|...+.+.......+   ++....+.|..+..+
T Consensus       150 ~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~  197 (338)
T d1orra_         150 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGG  197 (338)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             cCcccCCccccccccccccchhhhhhhhhhhcc---Ccccccccccceeec
Confidence             00111122356789999999999998888876   556666665554433

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.54  E-value=1.3e-13  Score=129.37  Aligned_cols=190  Identities=13%  Similarity=0.059  Sum_probs=131.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHH-CCCEEEEEec---------CchhHHHHHHHHHHHh------cCCcEEEEEeecCCHH
Q psy2854          57 KVCIITGANSGIGYETAKELAK-LKATVVLGCR---------SMIRGQEALEKLKKEV------QDGQIVLMELNLASFD  120 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~r---------~~~~~~~~~~~l~~~~------~~~~~~~~~~Dvs~~~  120 (384)
                      ..||||||+|.||.+++++|++ .|++|+++++         ..+..++....+....      ......++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            4699999999999999999986 6999998874         1222233333332211      1246788999999999


Q ss_pred             HHHHHHHHHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCc
Q psy2854         121 SIKNFAKNVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDF  199 (384)
Q Consensus       121 ~v~~~~~~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~  199 (384)
                      .++++++.    ..++|+++|.|+......    ..+.....+++|+.++..+++++..... ++++.+|..........
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~  154 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMG  154 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-
T ss_pred             Hhhhhhhc----cceeehhhcccccccccc----cccccccccccccccccccchhhhccCCcccccccccccccccccc
Confidence            88887754    457999999999744322    3344566888999999999999887654 56666666554433221


Q ss_pred             CCCCcCcC--cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccc
Q psy2854         200 DNLNGEKG--FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFR  257 (384)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~  257 (384)
                      ........  ......+...|+.||.+.+.+++.+...+   |+++.+++|+.+..+...
T Consensus       155 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             ----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             cccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence            11111110  11112256789999999999999988775   899999999998877644

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.49  E-value=4.2e-14  Score=129.65  Aligned_cols=178  Identities=16%  Similarity=0.098  Sum_probs=127.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEE------ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLG------CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~------~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .++||||+|-||.+++++|+++|++|...      ++......  ...+.......++.++..|.++.......      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARE------   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhcc------
Confidence            58999999999999999999999865433      22110000  01111111246789999999998866643      


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                       ....|.++|.|+......    ..+..+..+++|+.|+.++++++...- +++|+.||.+.+.... -..+.+..... 
T Consensus        74 -~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~-~~~~~E~~~~~-  146 (322)
T d1r6da_          74 -LRGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSID-SGSWTESSPLE-  146 (322)
T ss_dssp             -TTTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCS-SSCBCTTSCCC-
T ss_pred             -ccccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCC-CCCCCCCCCCC-
Confidence             347899999998743322    344556688999999999999998654 4799988887665432 22333333222 


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                         +...|+.||.+.+.+++.++++.   |+++..++|+.+..|..
T Consensus       147 ---p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  186 (322)
T d1r6da_         147 ---PNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (322)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCC
Confidence               55689999999999999998876   89999999999998753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.5e-13  Score=118.52  Aligned_cols=156  Identities=19%  Similarity=0.104  Sum_probs=113.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      |++|+|+||||||.||++++++|.++|.  +|++.+|++.+....      .  ...+....+|+.+.+++.+       
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~-------   76 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYAS-------   76 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGG-------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeecccccccccc-------
Confidence            6789999999999999999999999996  899999976432211      0  2356667788877665443       


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCccc
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQ  210 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  210 (384)
                      .+...|+++|++|...       .........++|+.++..+.+.+...- +++|++||......               
T Consensus        77 ~~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~---------------  134 (232)
T d2bkaa1          77 AFQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS---------------  134 (232)
T ss_dssp             GGSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT---------------
T ss_pred             cccccccccccccccc-------cccchhhhhhhcccccceeeecccccCccccccCCccccccC---------------
Confidence            3347899999998631       233455677889999999999887654 36888888754322               


Q ss_pred             CCCChhhhhhcHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCcc
Q psy2854         211 KGHSNPAYCNSKLMNYYFGAELYLKYADKGV-DVSVVCPGWCYTNLF  256 (384)
Q Consensus       211 ~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI-~v~~v~PG~v~T~~~  256 (384)
                         ....|+.+|...+...+       ..|. ++..++||.+..+..
T Consensus       135 ---~~~~Y~~~K~~~E~~l~-------~~~~~~~~IlRP~~i~G~~~  171 (232)
T d2bkaa1         135 ---SNFLYLQVKGEVEAKVE-------ELKFDRYSVFRPGVLLCDRQ  171 (232)
T ss_dssp             ---CSSHHHHHHHHHHHHHH-------TTCCSEEEEEECCEEECTTG
T ss_pred             ---ccchhHHHHHHhhhccc-------cccccceEEecCceeecCCC
Confidence               33469999988775433       2244 578899999987643

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=8.3e-12  Score=108.42  Aligned_cols=165  Identities=16%  Similarity=0.067  Sum_probs=105.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKAT--VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      ++|+||||+|+||++++++|+++|++  |+...|++++.+.    +     ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~-----~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c-----cCCcEEEEeeeccccccccccc-------
Confidence            59999999999999999999999975  5556777543221    1     3467789999999998887654       


Q ss_pred             CccEEEECCCCCCCCCC---------CCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcCcccccCCcCcCCCCc
Q psy2854         135 KIHVLINNAGVSVPIKE---------KLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGSSLMDRGTIDFDNLNG  204 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS~~~~~~~~~~~~~~~  204 (384)
                      .+|.+||+|+.......         .............+|+.+...+......... .....++.........      
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------  141 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------  141 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------
Confidence            68999999987432111         1112234556678899999888887776655 3444444333222110      


Q ss_pred             CcCcccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         205 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       205 ~~~~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                               ....+...+.........+..   ..|+++..++||.+..+.
T Consensus       142 ---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         142 ---------LNKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             ---------GGGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSC
T ss_pred             ---------cccccccchhhhhhhhhhhhh---cccccceeecceEEECCC
Confidence                     111122222222222233333   358999999999987764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.28  E-value=2.6e-11  Score=107.97  Aligned_cols=154  Identities=22%  Similarity=0.279  Sum_probs=113.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++||||||.||++++++|.++|++|+.++|+.                       +|++|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999999999999988752                       5999999999888765     689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+|+......    .....+..+..|+.....+..........++..||........ .....+....    .+...
T Consensus        55 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~-~~~~~e~~~~----~~~~~  125 (281)
T d1vl0a_          55 VVINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEA-KEPITEFDEV----NPQSA  125 (281)
T ss_dssp             EEEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCC-SSCBCTTSCC----CCCSH
T ss_pred             EEEeecccccccc----ccccchhhcccccccccccccccccccccccccccceeeeccc-cccccccccc----cchhh
Confidence            9999998743211    3344466788899888888888887777777777765543322 2222222211    25667


Q ss_pred             hhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         218 YCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       218 Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                      |+.+|...+.+.+.       .+.+...++|+.+..+-
T Consensus       126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~  156 (281)
T d1vl0a_         126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDG  156 (281)
T ss_dssp             HHHHHHHHHHHHHH-------HCSSEEEEEECSEESSS
T ss_pred             hhhhhhHHHHHHHH-------hCCCccccceeEEeCCC
Confidence            99999877765532       25678889999998764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.19  E-value=2.8e-11  Score=108.50  Aligned_cols=139  Identities=15%  Similarity=0.100  Sum_probs=99.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .+|||||+|-||.+++++|.++|..|.+ +++..                .   +..|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~----------------~---~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSK----------------E---FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCS----------------S---SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCc----------------c---ccCcCCCHHHHHHHHHHc-----CCC
Confidence            4899999999999999999999865544 44321                0   347999999999888765     689


Q ss_pred             EEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCChhh
Q psy2854         138 VLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPA  217 (384)
Q Consensus       138 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (384)
                      ++||+||......    +.+.-+..+++|+.+...+.+++...-.+++++||.....+... ....+....    .+...
T Consensus        57 ~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~-~~~~E~~~~----~p~~~  127 (298)
T d1n2sa_          57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGD-IPWQETDAT----SPLNV  127 (298)
T ss_dssp             EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTT-CCBCTTSCC----CCSSH
T ss_pred             EEEEecccccccc----cccCccccccccccccccchhhhhccccccccccccccccCCCC-CCCcccccc----CCCch
Confidence            9999999754322    22334567899999999999988777678888888765543321 222222221    15568


Q ss_pred             hhhcHHHHHHHHH
Q psy2854         218 YCNSKLMNYYFGA  230 (384)
Q Consensus       218 Y~aSK~a~~~~~~  230 (384)
                      |+.+|.+.+.+.+
T Consensus       128 y~~~k~~~e~~~~  140 (298)
T d1n2sa_         128 YGKTKLAGEKALQ  140 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHH
Confidence            9999988776543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.14  E-value=7e-11  Score=101.02  Aligned_cols=148  Identities=11%  Similarity=0.092  Sum_probs=101.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|+++||||||.||++++++|.++|.  +|+...|++..            ...+   +..+..|..++..      ...
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~---~~~~~~d~~~~~~------~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPR---LDNPVGPLAELLP------QLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTT---EECCBSCHHHHGG------GCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hccc---ccccccchhhhhh------ccc
Confidence            47999999999999999999999997  67776765321            0112   3455555443321      234


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      +.+|.+|+++|.....      ...-+...++|+.++..+++.+...- ++++++||..+...                 
T Consensus        61 ~~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-----------------  117 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-----------------  117 (212)
T ss_dssp             SCCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-----------------
T ss_pred             cchheeeeeeeeeccc------cccccccccchhhhhhhcccccccccccccccccccccccc-----------------
Confidence            5789999999874221      12234578889999999999887654 36888887654322                 


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGV-DVSVVCPGWCYTNL  255 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI-~v~~v~PG~v~T~~  255 (384)
                       ....|..+|...+...+       ..+. +.+.++|+.+..+.
T Consensus       118 -~~~~y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         118 -SSIFYNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             -CSSHHHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTT
T ss_pred             -cccchhHHHHHHhhhcc-------ccccccceeeCCcceeCCc
Confidence             34569999987765432       3344 68889999997664

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.13  E-value=2.7e-10  Score=102.49  Aligned_cols=158  Identities=13%  Similarity=0.049  Sum_probs=98.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++|+||||||.||++++++|+++|++|+++.|+.........+.........+.++++|++|.+++.+.++       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            45999999999999999999999999999999764322211111222224578899999999988776654       67


Q ss_pred             cEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         137 HVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       137 d~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      +.++++++....               ..|..+...++.++.... .++++.||.........           ......
T Consensus        77 ~~~~~~~~~~~~---------------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~-----------~~~~~~  130 (312)
T d1qyda_          77 DVVISALAGGVL---------------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME-----------HALQPG  130 (312)
T ss_dssp             SEEEECCCCSSS---------------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC-----------CCCSST
T ss_pred             chhhhhhhhccc---------------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc-----------cccchh
Confidence            888888875321               134444455555555543 36666665433221110           000123


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTN  254 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~  254 (384)
                      ..|..+|..++.+    ..   ..|+.+..++||.+..+
T Consensus       131 ~~~~~~~~~~~~~----~~---~~~~~~~i~r~~~~~g~  162 (312)
T d1qyda_         131 SITFIDKRKVRRA----IE---AASIPYTYVSSNMFAGY  162 (312)
T ss_dssp             THHHHHHHHHHHH----HH---HTTCCBCEEECCEEHHH
T ss_pred             hhhhHHHHHHHHh----hc---ccccceEEeccceeecC
Confidence            3455555544432    22   24788888999887543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=5.4e-10  Score=100.27  Aligned_cols=171  Identities=12%  Similarity=0.044  Sum_probs=110.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH--hCCC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK--QYPK  135 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~--~~g~  135 (384)
                      ||||||+|-||.+++++|+++|. +|+++++-.. ..+.. .+.+    .    ..+|..+.+..   .+....  .+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~-~~~~~-~~~~----~----~~~~~~~~~~~---~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFV-NLVD----L----NIADYMDKEDF---LIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGH-HHHT----S----CCSEEEEHHHH---HHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC-cchhh-cccc----c----chhhhccchHH---HHHHhhhhcccc
Confidence            79999999999999999999997 5777653221 11111 1111    1    12333333332   222222  3457


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEEcCcccccCCcCcCCCCcCcCcccCCCCh
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSN  215 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (384)
                      .++++|.|+.....      ....+...+.|+.+...+...+...-.++++.||.....+..... .....    ...+.
T Consensus        69 ~~~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~-~~~~~----~~~~~  137 (307)
T d1eq2a_          69 VEAIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-IESRE----YEKPL  137 (307)
T ss_dssp             CCEEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB-CSSGG----GCCCS
T ss_pred             hhhhhhhccccccc------ccccccccccccccccccccccccccccccccccccccccccccc-ccccc----ccccc
Confidence            88999998753321      123344677888898888888887777888888777665543211 11111    11256


Q ss_pred             hhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCcc
Q psy2854         216 PAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLF  256 (384)
Q Consensus       216 ~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~  256 (384)
                      ..|+.+|.+.+.+++.+..+   .++.+..++|..+..|..
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~  175 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE  175 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccc
Confidence            78999999999998887665   478999999998887754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.94  E-value=2.1e-13  Score=115.54  Aligned_cols=48  Identities=19%  Similarity=0.297  Sum_probs=42.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ  105 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~  105 (384)
                      ++.|+||+|+||+++|+.|++.|++|++.+|+++++++..+++.....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            356778889999999999999999999999999999999888876643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.93  E-value=1.1e-08  Score=90.97  Aligned_cols=82  Identities=20%  Similarity=0.221  Sum_probs=63.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH--HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ--EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|+||||||||.||++++++|+++|++|++.+|+.....  +....+... ....+.++.+|+.+..+..+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh-ccCCcEEEEeecccchhhhhhhh------
Confidence            468999999999999999999999999999999765432  222222222 24568889999999988776654      


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                       ..+.++++++.
T Consensus        76 -~~~~vi~~~~~   86 (307)
T d1qyca_          76 -NVDVVISTVGS   86 (307)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -hceeeeecccc
Confidence             57889998875

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.92  E-value=1.6e-08  Score=92.68  Aligned_cols=152  Identities=14%  Similarity=0.058  Sum_probs=98.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHH-HHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSI-KNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v-~~~~~~i~~~~  133 (384)
                      +.|+++||||||.||.+++++|+++|++|++..|+..+...  .++..   ...+..+++|+.|..+. +.+       +
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a-------~   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTL-------F   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHH-------H
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHH-------h
Confidence            46899999999999999999999999999999998765432  22222   35688999999986543 322       2


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc-CcEEEEcCcccccCCcCcCCCCcCcCcccCC
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI-QKVVIVGSSLMDRGTIDFDNLNGEKGFVQKG  212 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  212 (384)
                      ...|.++.+.....                ..|+....+++.++...- .++++.||..........             
T Consensus        70 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~-------------  120 (350)
T d1xgka_          70 EGAHLAFINTTSQA----------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW-------------  120 (350)
T ss_dssp             TTCSEEEECCCSTT----------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC-------------
T ss_pred             cCCceEEeeccccc----------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc-------------
Confidence            46777776653211                123344455666665553 477777776543322210             


Q ss_pred             CChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCc
Q psy2854         213 HSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVVCPGWCYTNL  255 (384)
Q Consensus       213 ~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~  255 (384)
                       ....|..+|...+.+.+       ..++....++||....++
T Consensus       121 -~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         121 -PAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             -CCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGC
T ss_pred             -cchhhhhhHHHHHHHHH-------hhccCceeeeeceeeccc
Confidence             22346667766554432       346788889998765543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.46  E-value=2.9e-06  Score=73.92  Aligned_cols=46  Identities=20%  Similarity=0.211  Sum_probs=36.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.||+++..+||+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~  199 (259)
T d1xq1a_         154 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  199 (259)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh
Confidence            3457999999999999999999999999999999999999998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.36  E-value=3.8e-06  Score=72.99  Aligned_cols=46  Identities=17%  Similarity=0.287  Sum_probs=42.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  200 (255)
T d1fmca_         155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc
Confidence            4457999999999999999999999999999999999999998754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.24  E-value=1.3e-05  Score=69.63  Aligned_cols=46  Identities=28%  Similarity=0.485  Sum_probs=37.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh
Confidence            4457999999999999999999999999999999999999998653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=7.5e-06  Score=67.21  Aligned_cols=88  Identities=18%  Similarity=0.153  Sum_probs=65.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ++++|.|+|.|+ ||.|++++..|++.|. +++++.|+.++.++......+............|+.+.+++.....    
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc----
Confidence            578999999998 7999999999999998 5889999987776654433222112344566789988887665443    


Q ss_pred             hCCCccEEEECCCCCCC
Q psy2854         132 QYPKIHVLINNAGVSVP  148 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~  148 (384)
                         ..|++||+......
T Consensus        90 ---~~diiIN~Tp~G~~  103 (182)
T d1vi2a1          90 ---SADILTNGTKVGMK  103 (182)
T ss_dssp             ---TCSEEEECSSTTST
T ss_pred             ---ccceeccccCCccc
Confidence               67999999876443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.21  E-value=3.6e-06  Score=72.92  Aligned_cols=45  Identities=38%  Similarity=0.489  Sum_probs=35.2

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+|+.||.+...+++.|+++|.+.||+|++||||+|+|+|.+..
T Consensus       169 ~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         169 VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC
Confidence            346999999999999999999999999999999999999998753

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.21  E-value=1.6e-05  Score=69.08  Aligned_cols=46  Identities=22%  Similarity=0.190  Sum_probs=41.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  199 (259)
T d2ae2a_         154 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT  199 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhh
Confidence            4457999999999999999999999999999999999999997643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.21  E-value=2.1e-05  Score=68.32  Aligned_cols=45  Identities=29%  Similarity=0.243  Sum_probs=41.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~  198 (261)
T d1geea_         154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH
T ss_pred             cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhh
Confidence            345799999999999999999999999999999999999999764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.20  E-value=1e-05  Score=70.36  Aligned_cols=45  Identities=20%  Similarity=0.211  Sum_probs=41.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       151 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~  195 (260)
T d1zema1         151 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  195 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhh
Confidence            345799999999999999999999999999999999999998654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.19  E-value=1.6e-06  Score=74.84  Aligned_cols=47  Identities=19%  Similarity=0.228  Sum_probs=43.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..+
T Consensus       144 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~  190 (242)
T d1ulsa_         144 GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP  190 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC
Confidence            44579999999999999999999999999999999999999998765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.19  E-value=1.2e-05  Score=70.43  Aligned_cols=44  Identities=30%  Similarity=0.388  Sum_probs=40.5

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHH
Confidence            34599999999999999999999999999999999999998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.19  E-value=3.1e-05  Score=67.08  Aligned_cols=46  Identities=28%  Similarity=0.269  Sum_probs=37.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.+|.+...+++.||+++.+.||+||+|+||+++|++.+..
T Consensus       152 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~  197 (258)
T d1ae1a_         152 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  197 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh
Confidence            4567999999999999999999999999999999999999987754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.12  E-value=8.7e-07  Score=76.66  Aligned_cols=47  Identities=21%  Similarity=0.350  Sum_probs=43.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.++
T Consensus       147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  193 (244)
T d1edoa_         147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG  193 (244)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh
Confidence            44679999999999999999999999999999999999999988764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.12  E-value=1e-06  Score=76.56  Aligned_cols=47  Identities=19%  Similarity=0.312  Sum_probs=39.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..+
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  201 (251)
T d2c07a1         155 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS  201 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC
Confidence            44579999999999999999999999999999999999999988764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.12  E-value=2.8e-06  Score=73.17  Aligned_cols=47  Identities=26%  Similarity=0.339  Sum_probs=43.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.|+.++.++||+||+|+||+++|++++.++
T Consensus       153 ~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~  199 (240)
T d2bd0a1         153 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD  199 (240)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC
Confidence            44579999999999999999999999999999999999999988764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.11  E-value=3.4e-06  Score=72.74  Aligned_cols=124  Identities=13%  Similarity=0.141  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHHHHH-HHHH-Hhhccccc----ccccccccccCC
Q psy2854         223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPI-AMMV-VIVGSSLM----DRGTIDFDNLNG  296 (384)
Q Consensus       223 ~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~-~~s~s~~~----~~~~i~f~~l~g  296 (384)
                      ..++.+.+....++.+  |.+..-+.|.....-..+.+.+.+.+.+..-+ ..+. .+.....+    .+..+......+
T Consensus        65 ~~v~~~~~~~~~~~g~--idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          65 AQWKAAVDTAVTAFGG--LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             HHHHHHHHHHHHHHSC--CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCC--CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            3556666777777754  55555566665444444444444443322111 1111 11111110    112233333333


Q ss_pred             CccccccCCCCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         297 EKGFVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       297 ~~~~~~~g~~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....    ....+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.++
T Consensus       143 ~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  194 (244)
T d1nffa_         143 LAGT----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP  194 (244)
T ss_dssp             TSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC
T ss_pred             cccc----ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh
Confidence            2222    244579999999999999999999999999999999999999987653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.11  E-value=1.5e-06  Score=74.80  Aligned_cols=47  Identities=23%  Similarity=0.302  Sum_probs=43.4

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.++
T Consensus       141 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~  187 (237)
T d1uzma1         141 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD  187 (237)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC
Confidence            45679999999999999999999999999999999999999988764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.10  E-value=4e-05  Score=66.46  Aligned_cols=45  Identities=27%  Similarity=0.385  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       151 ~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~  195 (259)
T d1ja9a_         151 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE  195 (259)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhh
Confidence            345799999999999999999999999999999999999998763

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.08  E-value=2.9e-06  Score=73.09  Aligned_cols=46  Identities=30%  Similarity=0.287  Sum_probs=43.0

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...|+.+|.+...+++.||+++.++||+||+|+||+++|++.++++
T Consensus       145 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~  190 (241)
T d2a4ka1         145 LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP  190 (241)
T ss_dssp             HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC
T ss_pred             ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh
Confidence            3569999999999999999999999999999999999999998765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=1.1e-06  Score=75.86  Aligned_cols=47  Identities=28%  Similarity=0.388  Sum_probs=43.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+...
T Consensus       146 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  192 (243)
T d1q7ba_         146 GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS  192 (243)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh
Confidence            44579999999999999999999999999999999999999988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.06  E-value=7e-06  Score=71.47  Aligned_cols=47  Identities=26%  Similarity=0.352  Sum_probs=43.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.||+++.++||+||+|+||+++|++.+.++
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  209 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD  209 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC
Confidence            34579999999999999999999999999999999999999998765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.06  E-value=8.5e-07  Score=77.21  Aligned_cols=47  Identities=26%  Similarity=0.252  Sum_probs=43.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.|++++.++||+||+|+||+|+|+|.+.+.
T Consensus       147 ~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~  193 (254)
T d1sbya1         147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN  193 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc
Confidence            45579999999999999999999999999999999999999988653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.02  E-value=5e-06  Score=71.84  Aligned_cols=46  Identities=20%  Similarity=0.258  Sum_probs=35.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       148 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  193 (247)
T d2ew8a1         148 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS  193 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------
T ss_pred             ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc
Confidence            4457999999999999999999999999999999999999998754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.97  E-value=5.1e-06  Score=72.05  Aligned_cols=46  Identities=20%  Similarity=0.190  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++++..
T Consensus       147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~  192 (254)
T d1hdca_         147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhc
Confidence            4467999999999999999999999999999999999999987643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.96  E-value=1.5e-05  Score=68.77  Aligned_cols=45  Identities=20%  Similarity=0.192  Sum_probs=42.0

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+|+.||.+...+++.+++++.++||+||+||||+|+|+|.+..
T Consensus       167 ~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~  211 (248)
T d1snya_         167 MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS  211 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence            447999999999999999999999999999999999999998764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=1.2e-05  Score=69.42  Aligned_cols=45  Identities=27%  Similarity=0.375  Sum_probs=41.8

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+|+.||.+...+++.||++++++||+||+|+||+++|++.+..
T Consensus       153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~  197 (251)
T d1vl8a_         153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV  197 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH
T ss_pred             ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc
Confidence            457999999999999999999999999999999999999998753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.94  E-value=1.2e-05  Score=70.03  Aligned_cols=46  Identities=17%  Similarity=0.221  Sum_probs=39.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~  202 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM  202 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhcc
Confidence            3456999999999999999999999999999999999999998754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.92  E-value=5.5e-06  Score=72.07  Aligned_cols=45  Identities=16%  Similarity=0.313  Sum_probs=41.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.++
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  196 (258)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHH
Confidence            346799999999999999999999999999999999999998764

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.4e-06  Score=76.67  Aligned_cols=46  Identities=20%  Similarity=0.333  Sum_probs=40.8

Q ss_pred             CCccccccccccccchHHHHHHhhc----CCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD----KGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~----~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      +..+|+.||.+...+++.++++|.+    .||+||++|||+|+|+|.+..
T Consensus       188 ~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         188 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence            5567999999999999999998865    489999999999999998864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.91  E-value=1.1e-05  Score=69.95  Aligned_cols=46  Identities=17%  Similarity=0.270  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++++..
T Consensus       148 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~  193 (256)
T d1k2wa_         148 LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGV  193 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHH
T ss_pred             cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhh
Confidence            4467999999999999999999999999999999999999987643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.91  E-value=8.9e-06  Score=70.66  Aligned_cols=45  Identities=31%  Similarity=0.416  Sum_probs=41.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       149 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  193 (257)
T d2rhca1         149 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS  193 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHH
Confidence            445799999999999999999999999999999999999998765

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.90  E-value=7.4e-06  Score=70.90  Aligned_cols=124  Identities=17%  Similarity=0.076  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCccccCchHHHHHHHH-HHHHHHH-Hhhcccc----ccccc-ccccccC
Q psy2854         223 LMNYYFGAELYLKYADKGVDVSVVCPGWCYTNLFRHADIKFYQKVMI-FPIAMMV-VIVGSSL----MDRGT-IDFDNLN  295 (384)
Q Consensus       223 ~a~~~~~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~-~~s~s~~----~~~~~-i~f~~l~  295 (384)
                      ..+..+.+....++.+-.|-||  +.|.....-..+.+.+.+.+.+- .-...+. .+..-..    ..++. +......
T Consensus        67 ~~v~~~~~~~~~~~G~iDiLVn--nAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~  144 (251)
T d1zk4a1          67 DGWTKLFDATEKAFGPVSTLVN--NAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIE  144 (251)
T ss_dssp             HHHHHHHHHHHHHHSSCCEEEE--CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhCCceEEEe--ccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccc
Confidence            3456667777777765455555  44544333333444433333321 1111111 1111111    11222 3333333


Q ss_pred             CCccccccCCCCccccccccccccchHHHHHH--hhcCCceEEEeecCceeccccccCC
Q psy2854         296 GEKGFVQKGHSNPAYCNSKLMNYYFGAELYLK--YADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       296 g~~~~~~~g~~~~~Y~~sKl~~~~~~~ela~~--l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      +..+.    ....+|+.||.+...+++.+|++  +.++||+||+|+||+++|++.+..+
T Consensus       145 ~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~  199 (251)
T d1zk4a1         145 GFVGD----PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP  199 (251)
T ss_dssp             GTSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST
T ss_pred             eeccC----CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC
Confidence            32211    23457999999999999999987  5678999999999999999988754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.90  E-value=1.1e-05  Score=70.74  Aligned_cols=46  Identities=22%  Similarity=0.240  Sum_probs=42.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  199 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM  199 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh
Confidence            3457999999999999999999999999999999999999987654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=1.1e-05  Score=69.76  Aligned_cols=45  Identities=29%  Similarity=0.194  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.++
T Consensus       144 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~  188 (248)
T d2d1ya1         144 ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  188 (248)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHH
Confidence            445799999999999999999999999999999999999998764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4e-06  Score=72.57  Aligned_cols=46  Identities=24%  Similarity=0.278  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++++.+
T Consensus       147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~  192 (250)
T d1ydea1         147 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL  192 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred             CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHH
Confidence            4457999999999999999999999999999999999999987643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.88  E-value=9e-06  Score=66.70  Aligned_cols=80  Identities=16%  Similarity=0.145  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +|++|+|+||+||+|.+.++.....|++|+.+++++++.+.    +++.  +....   +|-.+++..+...+..  ..+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~--Ga~~v---i~~~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQI--GFDAA---FNYKTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHT--TCSEE---EETTSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhh--hhhhh---cccccccHHHHHHHHh--hcC
Confidence            48899999999999999999999999999999998654332    2222  22221   3444444444333322  224


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|+++++.|.
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            79999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.87  E-value=2.1e-05  Score=68.69  Aligned_cols=44  Identities=18%  Similarity=0.222  Sum_probs=41.2

Q ss_pred             ccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.||+++.++||+||+|+||+++|++.++.
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  198 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  198 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh
Confidence            36999999999999999999999999999999999999998754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.87  E-value=1.5e-05  Score=69.01  Aligned_cols=46  Identities=9%  Similarity=0.093  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||++++++||+||+|+||+++|++.+..
T Consensus       140 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~  185 (252)
T d1zmta1         140 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYF  185 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSS
T ss_pred             cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhh
Confidence            3457999999999999999999999999999999999999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.5e-05  Score=69.07  Aligned_cols=46  Identities=28%  Similarity=0.547  Sum_probs=41.1

Q ss_pred             CCccccccccccccchHH--HHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAE--LYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~e--la~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.  |+.++.++||+||+|+||+++|++++..
T Consensus       145 ~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~  192 (254)
T d2gdza1         145 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI  192 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhc
Confidence            445799999999999996  7889999999999999999999998754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.7e-05  Score=64.21  Aligned_cols=78  Identities=18%  Similarity=0.299  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||.|+|-|| ||-+++++..|.+.|.+|+++.|+.++.++..+.+...   ..+..+  +..+.            .
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~---~~~~~~--~~~~~------------~   76 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT---GSIQAL--SMDEL------------E   76 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG---SSEEEC--CSGGG------------T
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc---cccccc--ccccc------------c
Confidence            467999999996 89999999999999999999999988877766655432   223222  22211            1


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                      ....|++||+....+.
T Consensus        77 ~~~~dliIN~Tp~G~~   92 (170)
T d1nyta1          77 GHEFDLIINATSSGIS   92 (170)
T ss_dssp             TCCCSEEEECCSCGGG
T ss_pred             ccccceeecccccCcc
Confidence            2368999999876543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.85  E-value=1.2e-05  Score=70.39  Aligned_cols=46  Identities=20%  Similarity=0.160  Sum_probs=42.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.||++|.++||+||+|+||+++|++.+..
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  202 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM  202 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc
Confidence            3457999999999999999999999999999999999999998754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=0.0003  Score=60.58  Aligned_cols=44  Identities=16%  Similarity=0.149  Sum_probs=39.5

Q ss_pred             ccccccccccccchHHHHHHh--hcCCceEEEeecCceeccccccC
Q psy2854         308 PAYCNSKLMNYYFGAELYLKY--ADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l--~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..|+.||.+...+++.|+++|  .+++|+||+|+||.++|++....
T Consensus       163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~  208 (257)
T d1xg5a_         163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKL  208 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhc
Confidence            459999999999999999988  56899999999999999987654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2.9e-05  Score=63.03  Aligned_cols=79  Identities=14%  Similarity=0.174  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+|++|...++.....|++|+++++++++.+..    ++ .+...    ..|.++.+-.+++.+...  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~-~Ga~~----vi~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQ-NGAHE----VFNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-TTCSE----EEETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cc-cCccc----ccccccccHHHHhhhhhc--cC
Confidence            578999999999999999998889999999999886543322    22 22222    247666553333332221  23


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999876

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=9.9e-05  Score=63.24  Aligned_cols=45  Identities=29%  Similarity=0.510  Sum_probs=40.7

Q ss_pred             CccccccccccccchHHHHHHhhc---CCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYAD---KGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~---~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ..+|+.||.+...+++.|+.+|.+   +||+||+|+||+++|++.++.
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~  200 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP  200 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc
Confidence            356999999999999999999865   689999999999999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.80  E-value=5e-05  Score=61.42  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=57.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +.++|.++|-|+ ||-+++++..|.+.+.+|+++.|+.++.++..+.+...   ..+.....|-.              .
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~--------------~   76 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI--------------P   76 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC--------------C
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc--------------c
Confidence            467899999986 88899999999998899999999988888777766432   34444444321              1


Q ss_pred             CCCccEEEECCCCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVPIK  150 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~  150 (384)
                      ....|++||+........
T Consensus        77 ~~~~diiIN~tp~g~~~~   94 (171)
T d1p77a1          77 LQTYDLVINATSAGLSGG   94 (171)
T ss_dssp             CSCCSEEEECCCC-----
T ss_pred             ccccceeeeccccccccc
Confidence            347899999988765443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=1.4e-05  Score=69.32  Aligned_cols=47  Identities=13%  Similarity=-0.115  Sum_probs=42.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.+|+.+.++||+||+|+||++.|++.+...
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK  200 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc
Confidence            34569999999999999999999999999999999999999987653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.79  E-value=3.9e-05  Score=63.15  Aligned_cols=87  Identities=16%  Similarity=0.116  Sum_probs=57.0

Q ss_pred             CC-EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH-HhC
Q psy2854          56 GK-VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM-KQY  133 (384)
Q Consensus        56 ~k-~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~-~~~  133 (384)
                      |+ +++++||+||+|.+.++-....|++|+.+.|+.++.++..+.+++.  +... .+..|-.+..+..+.++++. ...
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~-vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQ-VITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSE-EEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccE-EEeccccchhHHHHHHHHHHhhcc
Confidence            44 5555899999999998888888999999999888777777666554  2222 22222212222333333333 345


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +++|+++++.|.
T Consensus       106 ~~vdvv~D~vg~  117 (189)
T d1gu7a2         106 GEAKLALNCVGG  117 (189)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            579999998763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.4e-05  Score=70.44  Aligned_cols=46  Identities=22%  Similarity=0.221  Sum_probs=37.8

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.|+.+|.++||+||+|+||+++|++.++.
T Consensus       151 ~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHh
Confidence            3457999999999999999999999999999999999999998753

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=7.8e-06  Score=69.97  Aligned_cols=45  Identities=22%  Similarity=0.300  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+|+++.++||+||+|+||+++|++.+.
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~  178 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  178 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh
Confidence            445799999999999999999999999999999999999998765

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.72  E-value=0.00011  Score=58.49  Aligned_cols=73  Identities=22%  Similarity=0.413  Sum_probs=54.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +++++.++|.|+ |++|+.+++.|..+|+ ++.++.|+.++.++..+++     +.+.    .+   .+++.+.+     
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~~----~~---~~~~~~~l-----   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGEA----VR---FDELVDHL-----   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCEE----CC---GGGHHHHH-----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hccc----cc---chhHHHHh-----
Confidence            578999999998 9999999999999998 5999999977776665544     2221    22   23333332     


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                        ...|++|++.+.
T Consensus        83 --~~~Divi~atss   94 (159)
T d1gpja2          83 --ARSDVVVSATAA   94 (159)
T ss_dssp             --HTCSEEEECCSS
T ss_pred             --ccCCEEEEecCC
Confidence              268999999885

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.72  E-value=2.6e-05  Score=67.52  Aligned_cols=46  Identities=22%  Similarity=0.262  Sum_probs=42.1

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ....|+.||.+...+++.||+++.+.||+||+|+||+++|++++..
T Consensus       147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  192 (255)
T d1gega_         147 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI  192 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH
T ss_pred             ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhh
Confidence            4457999999999999999999999999999999999999987653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.71  E-value=8.7e-05  Score=59.73  Aligned_cols=82  Identities=18%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+|+|+| +|++|...++.+...|++|+++++++++.+.+.+ +     +... .+..|-. .++.....+++.+..|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~-~~~~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADV-TLVVDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE-EEECCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcE-EEecccc-ccccchhhhhhhcccc
Confidence            467999997 6899999999998999999999999776544322 1     2222 2233322 2334455566666554


Q ss_pred             -CccEEEECCCC
Q psy2854         135 -KIHVLINNAGV  145 (384)
Q Consensus       135 -~id~lvnnAG~  145 (384)
                       .+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence             69999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=5.7e-05  Score=61.40  Aligned_cols=80  Identities=16%  Similarity=0.213  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+||+|...++.....|++|+.+++++++.+..    ++.  +..   ...|-++++-.+++.+ +- ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~----~~l--Ga~---~vi~~~~~d~~~~v~~-~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA----LKA--GAW---QVINYREEDLVERLKE-IT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HHH--TCS---EEEETTTSCHHHHHHH-HT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH----Hhc--CCe---EEEECCCCCHHHHHHH-Hh-CCC
Confidence            478999999999999999998888999999999997665443    222  222   2247666553333322 21 223


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|+++++.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            68999999874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.69  E-value=7.4e-05  Score=60.38  Aligned_cols=74  Identities=14%  Similarity=0.186  Sum_probs=53.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +|.++|.|| |.+|+.+|+.|+++|++|++++|+.++.++..+++      ........+..+.......+.       .
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHhhhh-------c
Confidence            688999887 99999999999999999999999977666554432      334445556666555554432       4


Q ss_pred             ccEEEECC
Q psy2854         136 IHVLINNA  143 (384)
Q Consensus       136 id~lvnnA  143 (384)
                      .|.++...
T Consensus        68 ~~~~i~~~   75 (182)
T d1e5qa1          68 HDLVISLI   75 (182)
T ss_dssp             SSEEEECS
T ss_pred             cceeEeec
Confidence            56666543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.66  E-value=2.3e-06  Score=73.51  Aligned_cols=47  Identities=26%  Similarity=0.215  Sum_probs=43.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+...
T Consensus       143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  189 (241)
T d1uaya_         143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP  189 (241)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh
Confidence            44579999999999999999999999999999999999999988764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.66  E-value=2.4e-05  Score=67.75  Aligned_cols=46  Identities=20%  Similarity=0.015  Sum_probs=35.9

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||++|..+||+||+|+||++.|++.+..
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~  201 (256)
T d1ulua_         156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI  201 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch
Confidence            4457999999999999999999999999999999999999988764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=5.2e-05  Score=67.05  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=41.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.||++|..+||+||+|+||++.|++.+.
T Consensus       161 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  205 (297)
T d1yxma1         161 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE  205 (297)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhh
Confidence            345799999999999999999999999999999999999998764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.61  E-value=4.1e-05  Score=67.59  Aligned_cols=46  Identities=15%  Similarity=0.010  Sum_probs=37.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.+|++++++||+||+|+||+++|++.+..
T Consensus       172 ~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  217 (294)
T d1w6ua_         172 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR  217 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhc
Confidence            3456999999999999999999999999999999999999987653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.61  E-value=3.7e-05  Score=66.43  Aligned_cols=45  Identities=18%  Similarity=0.191  Sum_probs=39.9

Q ss_pred             CCccccccccccccchHHHHHHhhc--CCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD--KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~--~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.+|+++.+  ++|+||+|+||+++|++.+.
T Consensus       147 ~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~  193 (253)
T d1hxha_         147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh
Confidence            3457999999999999999999977  45999999999999998763

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.60  E-value=9.1e-05  Score=60.34  Aligned_cols=77  Identities=16%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY-  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-  133 (384)
                      +|++|+|+||+||+|...++.+...|++|++++++.++.+    .+++ . +.. +  ..|-.+++-.    +++++.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~-~-Ga~-~--vi~~~~~~~~----~~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSR-L-GVE-Y--VGDSRSVDFA----DEILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHT-T-CCS-E--EEETTCSTHH----HHHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccc-c-ccc-c--cccCCccCHH----HHHHHHhC
Confidence            4789999999999999999988888999999998865432    2332 2 222 2  2355554422    3344432 


Q ss_pred             -CCccEEEECCC
Q psy2854         134 -PKIHVLINNAG  144 (384)
Q Consensus       134 -g~id~lvnnAG  144 (384)
                       .++|+++++.|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence             36999999987

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=2.2e-05  Score=67.47  Aligned_cols=46  Identities=13%  Similarity=0.140  Sum_probs=42.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       143 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~  188 (242)
T d1cyda_         143 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV  188 (242)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh
Confidence            3457999999999999999999999999999999999999997753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.9e-05  Score=66.75  Aligned_cols=46  Identities=17%  Similarity=0.235  Sum_probs=42.2

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+..
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~  190 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT  190 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh
Confidence            3457999999999999999999999999999999999999998754

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.52  E-value=7.3e-05  Score=60.62  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+||.|...++-....|++|+.+++++++.+... ++     +.... +  |-++.  ..+..+..  ..+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l-----Ga~~v-i--~~~~~--~~~~~~~~--~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEV-L--AREDV--MAERIRPL--DKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEE-E--ECC-----------C--CSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc-----cccee-e--ecchh--HHHHHHHh--hcc
Confidence            4789999999999999988888889999999999877654432 22     22222 2  32221  12222111  224


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      ++|+++++.|-
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            79999999985

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=7.4e-05  Score=51.45  Aligned_cols=41  Identities=24%  Similarity=0.249  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE   95 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   95 (384)
                      ++++++|+||+||+|...++.+...|++|+.+.+++++.+-
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            47799999999999999999888899999999998776543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.51  E-value=5.3e-05  Score=64.63  Aligned_cols=45  Identities=20%  Similarity=0.025  Sum_probs=40.4

Q ss_pred             CCccccccccccccchHHHHHHhh--cCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYA--DKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~--~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||.++.  ++||+||+|+||+++|++.|.
T Consensus       138 ~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~  184 (236)
T d1dhra_         138 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK  184 (236)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchh
Confidence            345799999999999999999997  579999999999999999763

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.47  E-value=0.00026  Score=56.99  Aligned_cols=74  Identities=11%  Similarity=0.187  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|+||+|++|...++.+...|++|+.+++++++.+... ++     +...   ..|..+.      .+++. ..+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~------~~~~~-~~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEE---AATYAEV------PERAK-AWG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSE---EEEGGGH------HHHHH-HTT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc-----ccce---eeehhhh------hhhhh-ccc
Confidence            5789999999999999999988889999999999877655432 22     2221   1244322      12222 345


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ++|+++++.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.46  E-value=0.00031  Score=57.05  Aligned_cols=80  Identities=24%  Similarity=0.260  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +.. ++  .|.++. +..+..+++.+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~v--i~~~~~-~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GAD-LT--LNRRET-SVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCS-EE--EETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cce-EE--Eecccc-chHHHHHHHHHhh
Confidence            4889999997 8999999999999998 799999987765433 222     222 22  344432 2223334444433


Q ss_pred             --CCccEEEECCCC
Q psy2854         134 --PKIHVLINNAGV  145 (384)
Q Consensus       134 --g~id~lvnnAG~  145 (384)
                        ..+|++|.++|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence              259999999986

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.43  E-value=1e-05  Score=70.01  Aligned_cols=43  Identities=23%  Similarity=0.251  Sum_probs=33.2

Q ss_pred             cccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         309 AYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       309 ~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      +|+.||.+...+++.||.+|.++||+||+|+||+++|++.+..
T Consensus       154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~  196 (257)
T d1fjha_         154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhh
Confidence            5999999999999999999999999999999999999998753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=1.5e-05  Score=68.66  Aligned_cols=47  Identities=23%  Similarity=0.199  Sum_probs=39.0

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ...+|+.||.+...+++.|++++.++||+||+|+||+++|++...++
T Consensus       159 ~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~  205 (248)
T d2o23a1         159 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP  205 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC
Confidence            44679999999999999999999999999999999999999987653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.40  E-value=0.00019  Score=55.14  Aligned_cols=71  Identities=18%  Similarity=0.195  Sum_probs=54.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++|.|+ |-+|+.+++.|.++|.+|+++++++++.++..+    .   ....++..|.+|++.++++      .....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~----~---~~~~vi~Gd~~~~~~l~~~------~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----E---IDALVINGDCTKIKTLEDA------GIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----H---CSSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh----h---hhhhhccCcccchhhhhhc------Chhhhh
Confidence            5889997 999999999999999999999999776655433    2   1456788999999866654      123567


Q ss_pred             EEEEC
Q psy2854         138 VLINN  142 (384)
Q Consensus       138 ~lvnn  142 (384)
                      .++..
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             hhccc
Confidence            77664

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.35  E-value=0.00018  Score=63.69  Aligned_cols=47  Identities=11%  Similarity=0.053  Sum_probs=42.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.||.+...+++.|++++.++||+||+|+||++.|.+...++
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~  204 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP  204 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc
Confidence            44579999999999999999999999999999999999998877654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00088  Score=53.62  Aligned_cols=80  Identities=26%  Similarity=0.280  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+. ++     +.. +.+..+-.+..+.   .+.+....
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~---~~~~~~~~   94 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEI---ARKVEGQL   94 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-ccccccccccccc---cccccccC
Confidence            4678999986 9999999999999999 7999999977655432 22     222 2233333344433   33333333


Q ss_pred             -CCccEEEECCCC
Q psy2854         134 -PKIHVLINNAGV  145 (384)
Q Consensus       134 -g~id~lvnnAG~  145 (384)
                       ..+|++|.++|.
T Consensus        95 g~g~Dvvid~~G~  107 (171)
T d1pl8a2          95 GCKPEVTIECTGA  107 (171)
T ss_dssp             TSCCSEEEECSCC
T ss_pred             CCCceEEEeccCC
Confidence             379999999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.2e-05  Score=64.19  Aligned_cols=45  Identities=18%  Similarity=0.317  Sum_probs=41.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||+++|++.+.
T Consensus       143 ~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh
Confidence            445799999999999999999999999999999999999998764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.31  E-value=0.00025  Score=62.36  Aligned_cols=47  Identities=9%  Similarity=-0.039  Sum_probs=41.4

Q ss_pred             CCccccccccccccchHHHHHHhh-cCCceEEEeecCceeccccccCC
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYA-DKGVDVCVVCPGWCYTNLFRHAD  352 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~-~~~v~v~~~~pg~~~t~l~~~~~  352 (384)
                      ....|+.+|.+...+++.++++++ ++||+||+|+||++.|++.+...
T Consensus       188 ~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~  235 (297)
T d1d7oa_         188 YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             cccceecccccccccccccchhccccceEEecccccccccchhhhhcc
Confidence            334699999999999999999996 57999999999999999988653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.31  E-value=0.00031  Score=60.64  Aligned_cols=44  Identities=14%  Similarity=-0.082  Sum_probs=40.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceeccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~  349 (384)
                      ....|+.||.+...+++.+++++.++||+||+|+||+++|++.+
T Consensus       156 ~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~  199 (268)
T d2h7ma1         156 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS  199 (268)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHH
T ss_pred             ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhh
Confidence            34579999999999999999999999999999999999999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00055  Score=58.91  Aligned_cols=43  Identities=19%  Similarity=0.180  Sum_probs=38.6

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.||++  .+||+||+|+||+++|++.+.
T Consensus       165 ~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~  207 (259)
T d1oaaa_         165 GWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHH
Confidence            4567999999999999999987  579999999999999998764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.21  E-value=2.1e-05  Score=68.25  Aligned_cols=45  Identities=18%  Similarity=0.059  Sum_probs=40.7

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.+|+++.++||+||+|+||++.|+....
T Consensus       168 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         168 GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred             chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence            455799999999999999999999999999999999999986543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00034  Score=57.12  Aligned_cols=80  Identities=14%  Similarity=0.158  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+++|+|+||+||+|...++-....|+++++ ++++.++..+..+    +. +..   ...|..+++ ..+.++++..  
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~----~~-gad---~vi~~~~~~-~~~~~~~~~~--   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS----EL-GFD---AAVNYKTGN-VAEQLREACP--   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH----HS-CCS---EEEETTSSC-HHHHHHHHCT--
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh----cc-cce---EEeeccchh-HHHHHHHHhc--
Confidence            3579999999999999988887778987544 5555444333332    22 222   234555544 3333333322  


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      ..+|+++.+.|-
T Consensus        99 ~GvDvv~D~vGg  110 (187)
T d1vj1a2          99 GGVDVYFDNVGG  110 (187)
T ss_dssp             TCEEEEEESSCH
T ss_pred             cCceEEEecCCc
Confidence            369999999873

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.19  E-value=0.0007  Score=54.14  Aligned_cols=80  Identities=13%  Similarity=0.148  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+++|.|++|++|..++..+...|. +|+++++++++.+...    + . +.. +  ..|.++.+..++..+..  .-
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~-~-Ga~-~--~i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----R-A-GAD-Y--VINASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----H-H-TCS-E--EEETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----H-c-CCc-e--eeccCCcCHHHHHHHHh--hc
Confidence            478999999999999999999998885 7888888865544332    2 1 222 2  23445544344333222  12


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +.+|+++.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            369999999885

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.18  E-value=0.00059  Score=55.12  Aligned_cols=82  Identities=17%  Similarity=0.291  Sum_probs=58.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      +++||.|+|-|+ ||.+++++..|.+.| +|.+..|+.++.++..+++...........+  +..+.+          ..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~~~~~----------~~   80 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KFSGLD----------VD   80 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EEECTT----------CC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hhhhhh----------hc
Confidence            578999999986 789999999998777 9999999999998888888665432211111  111111          11


Q ss_pred             CCCccEEEECCCCCCC
Q psy2854         133 YPKIHVLINNAGVSVP  148 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~  148 (384)
                      ....|++||+......
T Consensus        81 ~~~~dliIn~tp~g~~   96 (177)
T d1nvta1          81 LDGVDIIINATPIGMY   96 (177)
T ss_dssp             CTTCCEEEECSCTTCT
T ss_pred             cchhhhhccCCccccc
Confidence            2468999999876443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.15  E-value=0.0032  Score=48.84  Aligned_cols=113  Identities=11%  Similarity=0.041  Sum_probs=67.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEV-QDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+....++.... ..........|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            346777795 999999999999988  479999999888777666665422 122333344443   21           


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEcC
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVGS  189 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vsS  189 (384)
                      ...-|++|..||.... +     .+.-...+..|..-.-.+.+.+.++-. .++.+.|
T Consensus        70 ~~~adivvitag~~~~-~-----g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQK-P-----GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEecccccC-C-----CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            2367999999997432 1     112233456676555555555554432 3444433

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00014  Score=63.25  Aligned_cols=45  Identities=20%  Similarity=0.137  Sum_probs=39.9

Q ss_pred             CCccccccccccccchHHHHHHhhc--CCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYAD--KGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~--~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.|+.++..  .+|+||+|+||+|+|++.++
T Consensus       159 ~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         159 MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence            4467999999999999999999864  57999999999999998764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00017  Score=60.63  Aligned_cols=81  Identities=14%  Similarity=0.123  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEee
Q psy2854          52 KPMEGKVCIITGAN----------------SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELN  115 (384)
Q Consensus        52 ~~~~~k~vlITGas----------------~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  115 (384)
                      .+++|+.||||+|.                |-.|.++|+++..+|++|.++.-....           .....+..  ..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~--~~   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKR--VD   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEE--EE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Cccccccc--ce
Confidence            47899999999864                689999999999999999887654210           01223333  34


Q ss_pred             cCCHHHHHHHHHHHHHhCCCccEEEECCCCCCC
Q psy2854         116 LASFDSIKNFAKNVMKQYPKIHVLINNAGVSVP  148 (384)
Q Consensus       116 vs~~~~v~~~~~~i~~~~g~id~lvnnAG~~~~  148 (384)
                      +.+.++..+.+.   +.....|++|++|.+...
T Consensus        69 ~~t~~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHHHH---hhhccceeEeeeechhhh
Confidence            455555554443   344567999999998654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.12  E-value=0.00033  Score=61.03  Aligned_cols=44  Identities=25%  Similarity=0.139  Sum_probs=39.3

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ....|+.||.+...+++.||++|.+ +|+||+|+||+++|++...
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~  194 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGP  194 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCc
Confidence            3457999999999999999999976 4999999999999998653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.12  E-value=0.0038  Score=48.87  Aligned_cols=118  Identities=14%  Similarity=0.016  Sum_probs=68.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.+.|.|+ |.+|..+|..++..|. ++++.+.++++.+....++.....  +.... ...+ ++.+   +..      
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~-~~~~---~~~------   74 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAE-YSYE---AAL------   74 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEE-CSHH---HHH------
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-Eecc-Cchh---hhh------
Confidence            456667797 9999999999888884 799999999888877777765321  11111 1111 1221   111      


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEE
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIV  187 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~v  187 (384)
                       ..-|++|..||........+ ....-...+..|..-...+.+.+.++-. .++.+
T Consensus        75 -~~adiVvitag~~~~~g~~~-~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivii  128 (154)
T d1pzga1          75 -TGADCVIVTAGLTKVPGKPD-SEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  128 (154)
T ss_dssp             -TTCSEEEECCSCSSCTTCCG-GGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             -cCCCeEEEecccccCCCCCC-cccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEE
Confidence             26799999999843221110 1111223455666555555555554433 34443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.11  E-value=0.00012  Score=63.82  Aligned_cols=45  Identities=11%  Similarity=-0.136  Sum_probs=41.6

Q ss_pred             CccccccccccccchHHHHHHhhcCCceEEEeecCceeccccccC
Q psy2854         307 NPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYTNLFRHA  351 (384)
Q Consensus       307 ~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t~l~~~~  351 (384)
                      ...|+.||.+...+++.+++++.++||+||+|+||++.|++.+..
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~  198 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI  198 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc
Confidence            346999999999999999999999999999999999999988765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.07  E-value=0.00034  Score=62.56  Aligned_cols=42  Identities=7%  Similarity=-0.069  Sum_probs=37.3

Q ss_pred             ccccccccccccchHHHHHHhhc-CCceEEEeecCceeccccc
Q psy2854         308 PAYCNSKLMNYYFGAELYLKYAD-KGVDVCVVCPGWCYTNLFR  349 (384)
Q Consensus       308 ~~Y~~sKl~~~~~~~ela~~l~~-~~v~v~~~~pg~~~t~l~~  349 (384)
                      ..|+.||.+...+++.||.+|.. +||+||+|+||+++|...+
T Consensus       184 ~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~  226 (329)
T d1uh5a_         184 GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGG
T ss_pred             hhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhh
Confidence            35899999999999999999974 7999999999999995444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.04  E-value=0.0072  Score=46.85  Aligned_cols=106  Identities=11%  Similarity=0.040  Sum_probs=67.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ..++.+.|.|| |.+|.++|..|+..|.  ++++.++++++.+....++.....  .........|.   +         
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~---------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D---------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G---------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H---------
Confidence            34567888897 9999999999999875  699999999888877777765421  22333333333   2         


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                        ....-|++|..||.... +- . +.   ...+..|.--.-.+.+.+.++
T Consensus        71 --~l~daDvvvitag~~~~-~~-~-~R---~dl~~~N~~i~~~i~~~i~~~  113 (148)
T d1ldna1          71 --DCRDADLVVICAGANQK-PG-E-TR---LDLVDKNIAIFRSIVESVMAS  113 (148)
T ss_dssp             --GTTTCSEEEECCSCCCC-TT-T-CS---GGGHHHHHHHHHHHHHHHHHH
T ss_pred             --HhccceeEEEecccccc-cC-c-ch---hHHHHHHHHHHHHHHHHHHhh
Confidence              12367999999997432 21 1 11   224455654444455555544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.03  E-value=0.0011  Score=52.84  Aligned_cols=44  Identities=14%  Similarity=0.191  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEK   99 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~   99 (384)
                      ++|.|+|-|+ ||.+++++..|.+.|+ +|.++.|+.++.++..+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            4678999987 9999999999999997 699999998776655443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.97  E-value=0.018  Score=49.37  Aligned_cols=40  Identities=20%  Similarity=0.065  Sum_probs=36.5

Q ss_pred             CCccccccccccccchHHHHHHhhcCCceEEEeecCceec
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYADKGVDVCVVCPGWCYT  345 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~~~~v~v~~~~pg~~~t  345 (384)
                      ...+|+.||.+...+++.||+++.++||+||+|+||++.|
T Consensus       186 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~  225 (284)
T d1e7wa_         186 GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  225 (284)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             ceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence            3457999999999999999999999999999999998655

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.95  E-value=0.00056  Score=55.10  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|.|+ ||+|...++.+...|+ +|+++++++++.+.+. ++     +..   ..+|..+.+..+    ++.+..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~---~~i~~~~~~~~~----~v~~~t   92 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT---DILNYKNGHIED----QVMKLT   92 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS---EEECGGGSCHHH----HHHHHT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc---ccccccchhHHH----HHHHHh
Confidence            4778999986 8999999998888998 6999999876654432 22     221   124555443333    333322


Q ss_pred             --CCccEEEECCCC
Q psy2854         134 --PKIHVLINNAGV  145 (384)
Q Consensus       134 --g~id~lvnnAG~  145 (384)
                        ..+|++|.++|.
T Consensus        93 ~g~G~D~vid~~g~  106 (174)
T d1jqba2          93 NGKGVDRVIMAGGG  106 (174)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             hccCcceEEEccCC
Confidence              259999999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.93  E-value=0.00036  Score=55.84  Aligned_cols=42  Identities=24%  Similarity=0.211  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA   96 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   96 (384)
                      .+.+|||+||+||+|.+.++-....|++|+.++++.++.+..
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            366899999999999998887778899999999998775543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.91  E-value=0.0013  Score=52.80  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS-FDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~  132 (384)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+...+     . +.. +.  .|..+ .+.+.+..+...  
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----~-Ga~-~~--i~~~~~~~~~~~~~~~~~--   95 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----V-GAT-EC--VNPQDYKKPIQEVLTEMS--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----T-TCS-EE--ECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----h-CCe-eE--EecCCchhHHHHHHHHHh--
Confidence            5789999999 7899999999999985 79999999887654432     1 221 11  22222 233444444332  


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+.+|++|.+.|.
T Consensus        96 ~~G~D~vid~~G~  108 (176)
T d2jhfa2          96 NGGVDFSFEVIGR  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCCCEEEecCCc
Confidence            3579999999986

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.91  E-value=0.0031  Score=50.12  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.+. ++     +... ++  |-.+.++.      ..+..+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l-----Ga~~-~i--~~~~~~~~------~~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-YI--ATLEEGDW------GEKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-EE--EGGGTSCH------HHHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc-----CCcE-Ee--eccchHHH------HHhhhc
Confidence            4789999987 89999988877788999999999988766432 22     2222 22  32222211      122345


Q ss_pred             CccEEEECCCCC
Q psy2854         135 KIHVLINNAGVS  146 (384)
Q Consensus       135 ~id~lvnnAG~~  146 (384)
                      ..|.++.+.|..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            799999988763

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.00057  Score=55.22  Aligned_cols=41  Identities=24%  Similarity=0.249  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE   95 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   95 (384)
                      .+++++|+||+||+|...++.....|++|+.+++++++.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            34689999999999999888888899999999999877543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.88  E-value=0.015  Score=44.83  Aligned_cols=113  Identities=18%  Similarity=0.079  Sum_probs=67.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCch--hHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCRSMI--RGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~--~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+.|.||+|.+|.++|..|+.+|.  ++++.+++++  +.+....++.....  .........--.|.+.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----------
Confidence            478999999999999999999984  7999998763  34444555554321  1222221111112221          


Q ss_pred             hCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcCcEEEE
Q psy2854         132 QYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQKVVIV  187 (384)
Q Consensus       132 ~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~iv~v  187 (384)
                       ...-|++|..||.... +-  .+.   ...++.|..-.-.+.+.+.++-...|++
T Consensus        72 -l~~aDvVVitAG~~~~-~g--~sR---~dl~~~Na~iv~~i~~~i~~~~~~~iiv  120 (145)
T d1hyea1          72 -IDESDVVIITSGVPRK-EG--MSR---MDLAKTNAKIVGKYAKKIAEICDTKIFV  120 (145)
T ss_dssp             -GTTCSEEEECCSCCCC-TT--CCH---HHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred             -hccceEEEEecccccC-CC--CCh---hhhhhhhHHHHHHHHHHHhccCCCeEEE
Confidence             2368999999997322 11  122   2356677766666666666554333333

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.81  E-value=0.0017  Score=51.68  Aligned_cols=74  Identities=19%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|.|+ ||+|...++.+...|+++++++++.++.+. .+++     +..   ...|..+.+...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad---~~i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GAD---EVVNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCS---EEEETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCc---EEEECchhhHHH-------HhcC
Confidence            4789999986 899999998888899999999998776542 2333     222   124666554322       2235


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      .+|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999985

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.81  E-value=0.00077  Score=57.03  Aligned_cols=45  Identities=20%  Similarity=0.059  Sum_probs=40.2

Q ss_pred             CCccccccccccccchHHHHHHhh--cCCceEEEeecCceecccccc
Q psy2854         306 SNPAYCNSKLMNYYFGAELYLKYA--DKGVDVCVVCPGWCYTNLFRH  350 (384)
Q Consensus       306 ~~~~Y~~sKl~~~~~~~ela~~l~--~~~v~v~~~~pg~~~t~l~~~  350 (384)
                      ...+|+.||.+...+++.|+.++.  ..+|+|++++||+++|++.|.
T Consensus       138 ~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~  184 (235)
T d1ooea_         138 SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK  184 (235)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh
Confidence            446799999999999999999987  368999999999999998774

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.79  E-value=0.00081  Score=51.41  Aligned_cols=73  Identities=14%  Similarity=0.075  Sum_probs=52.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |.++|.|+ |-+|+++|+.|.++|.+|++++.++++.++.    ..    .....+..|.++++.++++      ...+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~----~~~~~~~gd~~~~~~l~~a------~i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS----YATHAVIANATEENELLSL------GIRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TT----TCSEEEECCTTCTTHHHHH------TGGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HH----hCCcceeeecccchhhhcc------CCccc
Confidence            45677776 7999999999999999999999996655543    22    2235567899998876654      11256


Q ss_pred             cEEEECCC
Q psy2854         137 HVLINNAG  144 (384)
Q Consensus       137 d~lvnnAG  144 (384)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77776654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.72  E-value=0.0033  Score=50.43  Aligned_cols=79  Identities=11%  Similarity=0.154  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDS-IKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~i~~~  132 (384)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++-+.+ +     +....   .|.++.++ .+...+..  .
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~~---in~~~~~~~~~~~~~~~--~   96 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATEC---ISPKDSTKPISEVLSEM--T   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSEE---ECGGGCSSCHHHHHHHH--H
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcEE---ECccccchHHHHHHHHh--c
Confidence            5789999986 8999999999999995 79999999888765432 2     22222   23333222 22222222  2


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+.+|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            3479999999985

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.72  E-value=0.012  Score=45.79  Aligned_cols=106  Identities=12%  Similarity=-0.009  Sum_probs=62.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC---------EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA---------TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~---------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .|.|+||+|.+|..++..|+..+.         +++...++.++.+....++.... ......+...-.+.+        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchhh--------
Confidence            799999999999999999998653         23333444445554444443321 123333333322222        


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                         .+...|++|..||.... +  ..+.   +..+..|+.-.-.+.+.+..+-
T Consensus        77 ---~~~~advViitaG~~~~-p--g~~r---~dl~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          77 ---AFKDADYALLVGAAPRK-A--GMER---RDLLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             ---HTTTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ---hcccccEEEeecCcCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHhC
Confidence               23478999999998432 1  1133   3356667766666666666653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.59  E-value=0.0032  Score=50.36  Aligned_cols=78  Identities=14%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEE-EEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATV-VLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~V-i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|.|+ |++|...+..+...|+++ +++++++++.+.+ +++     +. .++  .|..+.+ ..+.++++  ..
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~-----Ga-~~~--i~~~~~~-~~~~i~~~--t~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GA-THV--INSKTQD-PVAAIKEI--TD   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TC-SEE--EETTTSC-HHHHHHHH--TT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc-----CC-eEE--EeCCCcC-HHHHHHHH--cC
Confidence            4789999997 899999998888889865 5566665554432 222     21 122  3555533 33333332  23


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +.+|++|.+.|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            579999999985

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.58  E-value=0.0041  Score=49.76  Aligned_cols=79  Identities=14%  Similarity=0.145  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS-FDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~  132 (384)
                      .|.+|+|.|+ ||||...+..+...|+ +|+++++++++.+.. +++     +.. ..  .|..+ .+..+...+..  .
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~-----Ga~-~~--i~~~~~~~~~~~~~~~~--~   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GAT-DC--LNPRELDKPVQDVITEL--T   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-EE--ECGGGCSSCHHHHHHHH--H
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh-----CCC-cc--cCCccchhhhhhhHhhh--h
Confidence            5789999975 9999999999999998 588889887765433 222     221 11  23222 22333333333  2


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+.+|++|.++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3589999999995

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.53  E-value=0.02  Score=44.03  Aligned_cols=75  Identities=12%  Similarity=0.133  Sum_probs=53.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      |.+.|.|+ |.+|..+|..|+.+|.  ++++.++++++.+....++.....  .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            45667795 8999999999998874  799999999888777777765432  2233333333   3322          


Q ss_pred             CCCccEEEECCCCC
Q psy2854         133 YPKIHVLINNAGVS  146 (384)
Q Consensus       133 ~g~id~lvnnAG~~  146 (384)
                       ..-|++|..||..
T Consensus        68 -~~adiVVitaG~~   80 (146)
T d1hyha1          68 -ADADVVISTLGNI   80 (146)
T ss_dssp             -TTCSEEEECCSCG
T ss_pred             -ccccEEEEecccc
Confidence             2679999999974

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0042  Score=48.46  Aligned_cols=76  Identities=12%  Similarity=0.061  Sum_probs=58.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      .++|.|. +-+|+.++++|.++|.+|++++.++++..+..++..    ...+.++..|.+|++.++++      ...+.|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a------~i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHh------ccccCC
Confidence            5888887 799999999999999999999998876666555543    34678899999999866653      223677


Q ss_pred             EEEECCC
Q psy2854         138 VLINNAG  144 (384)
Q Consensus       138 ~lvnnAG  144 (384)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            7776653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.49  E-value=0.0042  Score=45.79  Aligned_cols=42  Identities=19%  Similarity=0.451  Sum_probs=36.0

Q ss_pred             CCCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          49 PFYKPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        49 ~~~~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      |.+-+++||+++|.|+ |.+|..-++.|++.|++|++.+....
T Consensus         5 Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             ceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3345799999999997 56999999999999999999887654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.48  E-value=0.022  Score=43.70  Aligned_cols=112  Identities=17%  Similarity=0.111  Sum_probs=66.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      .+.|+||+|.+|.++|..|+.+|.  ++++.+.+..+.+  ..++...   ........-+. ..+..+.+       ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~---~~~~~~~~~~~-~~~~~~~~-------~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI---ETRATVKGYLG-PEQLPDCL-------KG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS---SSSCEEEEEES-GGGHHHHH-------TT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh---hhhcCCCeEEc-CCChHHHh-------CC
Confidence            578999999999999999999886  5999998764332  2333221   11111111122 22222222       36


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEc
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVG  188 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vs  188 (384)
                      -|++|..||... .+-  .+.   ...++.|..-.-.+.+.+.++-. .++.+.
T Consensus        69 aDivVitag~~~-~~g--~sR---~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          69 CDVVVIPAGVPR-KPG--MTR---DDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             CSEEEECCSCCC-CTT--CCG---GGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCEEEECCCcCC-CCC--CCc---chHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            899999999732 221  122   23577787777667777766643 344443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.48  E-value=0.0047  Score=49.17  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++.+...    + . +. .++  .|-+ .+..++..+..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~-~-ga-~~~--i~~~-~~~~~~~~~~~--~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----R-L-GA-DHV--VDAR-RDPVKQVMELT--RG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----H-T-TC-SEE--EETT-SCHHHHHHHHT--TT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----h-c-cc-cee--ecCc-ccHHHHHHHhh--CC
Confidence            3789999986 9999999998888886 5677788765544332    2 2 22 122  2433 23344333321  12


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      ..+|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            369999999985

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.47  E-value=0.0061  Score=48.08  Aligned_cols=83  Identities=16%  Similarity=0.172  Sum_probs=54.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL--------KKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      +.|.| .|-+|.++|+.|.+.|++|++.+|+++..+++.+.-        .+......+.++.   ...++++++++++.
T Consensus         3 I~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKLI   78 (165)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHHG
T ss_pred             EEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhhh
Confidence            44555 499999999999999999999999976655543321        0111123333322   24567888888887


Q ss_pred             HhCCCccEEEECCCC
Q psy2854         131 KQYPKIHVLINNAGV  145 (384)
Q Consensus       131 ~~~g~id~lvnnAG~  145 (384)
                      ....+=.++++.++.
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            766555666666543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.47  E-value=0.051  Score=42.35  Aligned_cols=106  Identities=8%  Similarity=0.063  Sum_probs=67.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +..+.+.|.|+ |.+|.++|..|+.+|.  ++++.++++++.+....++.....  .........|..+           
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-----------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-----------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-----------
Confidence            45567777796 9999999999999987  699999998888777777765221  2222222233322           


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                         ...-|++|..||... .+-  .+.   ...+..|..-.-.+.+.+.+.
T Consensus        86 ---~~~adiVVitAg~~~-~~g--~tR---~~l~~~N~~i~~~i~~~i~~~  127 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQ-QEG--ESR---LNLVQRNVNVFKFIIPQIVKY  127 (160)
T ss_dssp             ---GTTCSEEEECCSCCC-CTT--CCG---GGGHHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccEEEEecCCcc-ccC--cch---HHHHHHHHHHHHHHHHHHHhc
Confidence               136799999999743 221  122   234555665444444444443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.44  E-value=0.013  Score=44.99  Aligned_cols=101  Identities=17%  Similarity=0.084  Sum_probs=58.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQD-GQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +.|.|+ |.+|.++|..++.+|.  ++++.++++++.+....++...... ........|   .+           ....
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~~~   68 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DVKD   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GGTT
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------HhCC
Confidence            445586 9999999999999876  7999999988776666666542211 222222222   22           1236


Q ss_pred             ccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         136 IHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       136 id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      -|++|..||.... +-     +.-...+..|..-...+.+.+.++
T Consensus        69 adivvitag~~~~-~~-----~~r~~l~~~N~~i~~~i~~~i~~~  107 (142)
T d1y6ja1          69 CDVIVVTAGANRK-PG-----ETRLDLAKKNVMIAKEVTQNIMKY  107 (142)
T ss_dssp             CSEEEECCCC------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEecccccC-cC-----cchhHHhhHHHHHHHHHHHHhhcc
Confidence            7999999997422 11     122345666766555555555554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.44  E-value=0.055  Score=42.87  Aligned_cols=107  Identities=9%  Similarity=-0.088  Sum_probs=61.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC---C----EEEEEecCc--hhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLK---A----TVVLGCRSM--IRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G---~----~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      -.|.||||+|+||..++..|++.+   .    .+.+.+...  +.++....++..... .....+.. -++..       
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~-~~~~~-------   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI-GIDPY-------   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE-ESCHH-------
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccc-cccch-------
Confidence            469999999999999999999753   2    344444433  223333334433211 12221111 12221       


Q ss_pred             HHHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         128 NVMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       128 ~i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                         +.+...|++|..||....      +-+.-...++.|..-.-.+.+.+.++-
T Consensus        96 ---~~~~~aDvVvi~ag~~rk------pg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRG------PGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCC------TTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ---hhccCCceEEEeeccCCC------CCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence               234589999999998422      122233466777766666666666653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.43  E-value=0.0035  Score=50.02  Aligned_cols=79  Identities=13%  Similarity=0.126  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLAS-FDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~  132 (384)
                      .|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++.+. .+++     +... +  .|..+ .+.+.+..+..  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~-~--i~~~~~~~~~~~~~~~~--~   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATE-C--INPQDFSKPIQEVLIEM--T   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSE-E--ECGGGCSSCHHHHHHHH--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcE-E--EeCCchhhHHHHHHHHH--c
Confidence            4789999998 5999999999999996 57777777666443 3333     2221 1  23322 23344444333  2


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+.+|++|.+.|.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence            3479999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.40  E-value=0.0091  Score=47.04  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+|.|+ |++|...++.+...|++|+++++++++.+...     +. +.. +  ..|.++.+..+++.    +..+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-----~~-Ga~-~--~i~~~~~~~~~~~~----~~~~   92 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-----KL-GAS-L--TVNARQEDPVEAIQ----RDIG   92 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HT-TCS-E--EEETTTSCHHHHHH----HHHS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-----cc-Ccc-c--cccccchhHHHHHH----Hhhc
Confidence            4789999886 99999999888889999999999976654332     22 222 1  23555555444333    2223


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ..|..|-+++
T Consensus        93 g~~~~i~~~~  102 (166)
T d1llua2          93 GAHGVLVTAV  102 (166)
T ss_dssp             SEEEEEECCS
T ss_pred             CCcccccccc
Confidence            4555555554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.39  E-value=0.018  Score=45.02  Aligned_cols=80  Identities=10%  Similarity=0.079  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .++...+.|.|+ |.+|..+|..|+.+|.  ++++.++++++.+....++.....  +........|..+          
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~----------   84 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV----------   84 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG----------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh----------
Confidence            455556777796 9999999999999875  699999998888877777765321  1222222333322          


Q ss_pred             HHHhCCCccEEEECCCCCC
Q psy2854         129 VMKQYPKIHVLINNAGVSV  147 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~  147 (384)
                          ...-|++|..||...
T Consensus        85 ----~~~adivvitag~~~   99 (159)
T d2ldxa1          85 ----SANSKLVIITAGARM   99 (159)
T ss_dssp             ----GTTEEEEEECCSCCC
T ss_pred             ----hccccEEEEeccccc
Confidence                237899999999743

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.30  E-value=0.0076  Score=46.80  Aligned_cols=83  Identities=12%  Similarity=0.090  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ..-|++.|.||.|-+|..+|+.|.+.|++|.+.+|+.....+...      .........   .....+...++++....
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~------~~~~~v~~~---~~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL------ANADVVIVS---VPINLTLETIERLKPYL   77 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH------TTCSEEEEC---SCGGGHHHHHHHHGGGC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh------hhccccccc---cchhhheeeeecccccc
Confidence            345689999999999999999999999999999998765443221      123343333   33455666677666554


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      .+=.+++..+.+
T Consensus        78 ~~~~iiiD~~Sv   89 (152)
T d2pv7a2          78 TENMLLADLTSV   89 (152)
T ss_dssp             CTTSEEEECCSC
T ss_pred             cCCceEEEeccc
Confidence            433455555543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.28  E-value=0.00062  Score=56.06  Aligned_cols=43  Identities=16%  Similarity=0.217  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE   95 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   95 (384)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|++.+.+.++...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            468999999998 6789999999999999999999888655443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.12  E-value=0.091  Score=40.01  Aligned_cols=111  Identities=11%  Similarity=0.020  Sum_probs=66.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+.|.|+ |.+|.++|..++.+|.  ++++.++++++.+....++..... .........  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            3556686 9999999999999886  699999998887776667765321 112222211  222222           2


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVG  188 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vs  188 (384)
                      .-|++|..||... .+  ..+..   +.+..|..-.-.+.+.+.++-. .++.+.
T Consensus        69 daDvVVitaG~~~-~~--g~~R~---dl~~~N~~i~~~i~~~i~~~~p~ai~ivv  117 (143)
T d1llda1          69 DADMVVITAGPRQ-KP--GQSRL---ELVGATVNILKAIMPNLVKVAPNAIYMLI  117 (143)
T ss_dssp             TCSEEEECCCCCC-CT--TCCHH---HHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCcEEEEeccccc-CC--CCchh---hhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            5799999999732 22  11222   3566676544445555554433 344443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.11  E-value=0.071  Score=40.50  Aligned_cols=73  Identities=21%  Similarity=0.144  Sum_probs=51.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +.|.|+ |.+|.++|..++.+|.  ++++.++++++++....++....+ ..+......|   .+++           ..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~~   67 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------KG   67 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------cC
Confidence            456686 8999999999998874  799999999888877777665432 2233333333   2222           26


Q ss_pred             ccEEEECCCCC
Q psy2854         136 IHVLINNAGVS  146 (384)
Q Consensus       136 id~lvnnAG~~  146 (384)
                      -|++|..||..
T Consensus        68 adivvitag~~   78 (140)
T d1a5za1          68 SDVVIVAAGVP   78 (140)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEecccc
Confidence            79999999974

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.10  E-value=0.027  Score=44.68  Aligned_cols=39  Identities=23%  Similarity=0.054  Sum_probs=34.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEA   96 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~   96 (384)
                      |++-|.|| |.+|.++|..|+++|++|.+.+|++++.+..
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~   40 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEI   40 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            67888897 8999999999999999999999997665543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.08  E-value=0.081  Score=40.25  Aligned_cols=103  Identities=14%  Similarity=0.023  Sum_probs=62.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecC--chhHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA--TVVLGCRS--MIRGQEALEKLKKEVQ-DGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~--~~~~~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+.|.||+|.+|.++|..++.+|.  ++++.+.+  .+..+....++..... ..+......|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            477999999999999999999976  68888854  3444444555554221 23344333333   21           


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      ...-|++|..||... .+-     +.-...++.|..-.-.+.+.+.++
T Consensus        68 ~~~aDiVvitaG~~~-~~g-----~~R~dl~~~N~~I~~~i~~~i~~~  109 (142)
T d1o6za1          68 TAGSDVVVITAGIPR-QPG-----QTRIDLAGDNAPIMEDIQSSLDEH  109 (142)
T ss_dssp             GTTCSEEEECCCCCC-CTT-----CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhcCEEEEeccccc-ccC-----CchhhHHHHHHHHHHHHHHHHHhc
Confidence            236899999999732 221     122346666765444444444433

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.08  E-value=0.014  Score=46.37  Aligned_cols=80  Identities=18%  Similarity=0.237  Sum_probs=53.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHH
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFD-SIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~i~~  131 (384)
                      -.|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+.+     . +... +  .|.++.+ .+.+..+..  
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----l-Ga~~-~--i~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----L-GATE-C--LNPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----T-TCSE-E--ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----c-CCcE-E--EcCCCchhHHHHHHHHh--
Confidence            35789999986 8999999999999997 68999999887655432     2 2221 2  3433322 123332222  


Q ss_pred             hCCCccEEEECCCC
Q psy2854         132 QYPKIHVLINNAGV  145 (384)
Q Consensus       132 ~~g~id~lvnnAG~  145 (384)
                      ..+.+|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23579999999885

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.05  E-value=0.025  Score=43.72  Aligned_cols=108  Identities=13%  Similarity=0.037  Sum_probs=64.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+.|.|+ |++|.++|..++..+. ++++.++++++.+....++....  ...+......|  +.+           ...
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~~   70 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DLA   70 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------ccC
Confidence            4667785 9999999998888775 69999999988877777765431  12333333322  222           123


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                      .-|++|..||........+ ....-...+..|..-...+.+.+.+.
T Consensus        71 ~advvvitag~~~~~g~~~-~~~~R~~l~~~N~~iv~~i~~~i~~~  115 (150)
T d1t2da1          71 GADVVIVTAGFTKAPGKSD-KEWNRDDLLPLNNKIMIEIGGHIKKN  115 (150)
T ss_dssp             TCSEEEECCSCSSCTTCCS-TTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecccccCCCCCc-cccchhHHHHHHHHHHHHHHHHHHhc
Confidence            6899999999743221111 11122335666765444455544444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.00  E-value=0.0081  Score=48.92  Aligned_cols=79  Identities=16%  Similarity=0.220  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+|.|+ |++|...+......|+ +|+++++++++++.+.     +. +.. +  ..|-.+ ++..+.+.++. ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-----~~-Ga~-~--~~~~~~-~~~~~~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-----AQ-GFE-I--ADLSLD-TPLHEQIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HT-TCE-E--EETTSS-SCHHHHHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-----hc-ccc-E--EEeCCC-cCHHHHHHHHh-CC
Confidence            4789999986 8999888888777787 6888898876654332     21 221 1  123333 33333333332 23


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      ...|++|.+.|.
T Consensus        93 ~g~D~vid~vG~  104 (195)
T d1kola2          93 PEVDCAVDAVGF  104 (195)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCcEEEEECccc
Confidence            469999999985

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0033  Score=44.65  Aligned_cols=38  Identities=18%  Similarity=0.116  Sum_probs=33.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 67899999999999999999988653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.99  E-value=0.014  Score=46.31  Aligned_cols=79  Identities=11%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHH-HHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDS-IKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~-v~~~~~~i~~~  132 (384)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+.+++++++++.+.+     . +. -++  .|.++.++ .++..+..  .
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-----~-GA-d~~--in~~~~~~~~~~~~~~~--~   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-----F-GA-TDF--VNPNDHSEPISQVLSKM--T   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----T-TC-CEE--ECGGGCSSCHHHHHHHH--H
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-----c-CC-cEE--EcCCCcchhHHHHHHhh--c
Confidence            5789999985 7788888888888877 68889998877654332     2 22 122  24433322 23333322  2


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+.+|+++.++|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2479999999985

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.91  E-value=0.033  Score=42.53  Aligned_cols=103  Identities=17%  Similarity=0.030  Sum_probs=62.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          59 CIITGANSGIGYETAKELAKLK--ATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +.|+|| |.+|.+++..|+..|  .++++.++++++.+....++....  ..........  ++.+.           ..
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------TA   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------GT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------hc
Confidence            556796 999999999999987  479999999988776555553321  1222332222  22322           23


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                      .-|++|..||......   .+.   ...++.|.--...+.+.+.++-
T Consensus        69 dadvvvitag~~~~~g---~~r---~~l~~~N~~i~~~i~~~i~~~~  109 (142)
T d1guza1          69 NSDIVIITAGLPRKPG---MTR---EDLLMKNAGIVKEVTDNIMKHS  109 (142)
T ss_dssp             TCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEEEEecCCCCC---Cch---HHHHHHHHHHHHHHHHHhhccC
Confidence            6899999999743211   122   2345566655555555555443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.90  E-value=0.05  Score=41.49  Aligned_cols=109  Identities=12%  Similarity=-0.027  Sum_probs=66.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHHhc--CCcEEEEE-eecCCHHHHHHHHHHHHHhC
Q psy2854          59 CIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLME-LNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~-~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.|.|+ |.+|.++|..++.+|.  ++++.++++++.+....++.....  +....... -|.   ++           .
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~-----------~   67 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL-----------L   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GG-----------G
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HH-----------h
Confidence            556686 9999999999998875  599999999888777777765422  12222222 233   21           1


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC-cEEEEc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ-KVVIVG  188 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~-~iv~vs  188 (384)
                      ..-|++|..||......   .+   -...+..|..-...+.+.+.++-. .++.+.
T Consensus        68 ~~adiVvitag~~~~~g---~~---r~~l~~~n~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPG---MT---RLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (142)
T ss_dssp             TTCSEEEECCCCCCCSS---CC---HHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             ccccEEEEeccccCCCC---Cc---hHHHHHHhhHHHHHHHHHHHhhCCCcEEEEe
Confidence            26799999999743211   12   233555566555455555544322 344443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.11  Score=39.68  Aligned_cols=105  Identities=16%  Similarity=0.021  Sum_probs=62.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC---CCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          58 VCIITGANSGIGYETAKELAKL---KATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+.|+|++|.+|.++|..|+.+   +.++++.+..+ ..+....++........... ..+-.+.+.++           
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~~-----------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPALE-----------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHHT-----------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCccccC-----------
Confidence            4779999999999999988643   46799999864 44444555544211122221 22222333222           


Q ss_pred             CccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhc
Q psy2854         135 KIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERI  181 (384)
Q Consensus       135 ~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l  181 (384)
                      .-|++|..||... .+-  .+   -...++.|..-.-.+.+.+.++-
T Consensus        69 ~aDvvvitaG~~~-k~g--~~---R~dl~~~N~~i~~~v~~~i~~~~  109 (145)
T d2cmda1          69 GADVVLISAGVRR-KPG--MD---RSDLFNVNAGIVKNLVQQVAKTC  109 (145)
T ss_dssp             TCSEEEECCSCCC-CTT--CC---GGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEECCCccC-CCC--cc---hhhHHHHHHHHHHHHHHHHHhhC
Confidence            5799999999742 221  12   23356777665555666666554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.79  E-value=0.019  Score=44.02  Aligned_cols=74  Identities=22%  Similarity=0.101  Sum_probs=50.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHh--cCCcEEEE-EeecCCHHHHHHHHHHHHHhC
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEV--QDGQIVLM-ELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~-~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+.|.|+ |.+|.++|..|+.++. ++++.+.++++.+....++....  .+...... .-|..+.              
T Consensus         3 KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~--------------   67 (142)
T d1uxja1           3 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT--------------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG--------------
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHh--------------
Confidence            4556686 9999999999998875 79999999888777666664321  12222222 2233222              


Q ss_pred             CCccEEEECCCCC
Q psy2854         134 PKIHVLINNAGVS  146 (384)
Q Consensus       134 g~id~lvnnAG~~  146 (384)
                      ..-|++|.+||..
T Consensus        68 ~~advvvitag~~   80 (142)
T d1uxja1          68 ANSDVIVVTSGAP   80 (142)
T ss_dssp             TTCSEEEECCSCC
T ss_pred             cCCCEEEEeeecc
Confidence            2679999999974

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.78  E-value=0.03  Score=44.42  Aligned_cols=85  Identities=11%  Similarity=0.121  Sum_probs=60.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHH---------------HHHHhcCCcEEEEEeecCCHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEK---------------LKKEVQDGQIVLMELNLASFDSI  122 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~~Dvs~~~~v  122 (384)
                      .+-|.|- |-+|..+|+.|++.|++|++.+|++++.++..++               +.+..  .....+...+.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQAV   80 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHHH
Confidence            4566664 8999999999999999999999998887765432               11211  1223344566777888


Q ss_pred             HHHHHHHHHhCCCccEEEECCCC
Q psy2854         123 KNFAKNVMKQYPKIHVLINNAGV  145 (384)
Q Consensus       123 ~~~~~~i~~~~g~id~lvnnAG~  145 (384)
                      .+..+.+.....+=+++|...-.
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHhccccCcEEEecCcc
Confidence            88888887766666777777644

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.63  E-value=0.0072  Score=48.60  Aligned_cols=39  Identities=28%  Similarity=0.244  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      ..+.||++.|.|. |.||+.+++.+...|++|+..+|+..
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            4589999999996 56999999999999999999998753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.40  E-value=0.044  Score=43.90  Aligned_cols=44  Identities=16%  Similarity=0.089  Sum_probs=37.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLK  101 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~  101 (384)
                      |+|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            46778887 779999999999999999999999887776655543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.021  Score=46.24  Aligned_cols=46  Identities=20%  Similarity=0.078  Sum_probs=38.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK  102 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~  102 (384)
                      =|.+.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.+
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            367889998 7799999999999999999999999877766665543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.34  E-value=0.29  Score=37.96  Aligned_cols=80  Identities=20%  Similarity=0.122  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+.-.|+|.|| |=-|++-++...+.|++|.+.+.+.+++++.....    + ..+   ..-.++.+.+++.++      
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~----~-~~~---~~~~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----G-SRV---ELLYSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G-GGS---EEEECCHHHHHHHHH------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh----c-ccc---eeehhhhhhHHHhhc------
Confidence            34568888886 67789999999999999999999977766544332    2 222   234456666655444      


Q ss_pred             CCccEEEECCCCCCCC
Q psy2854         134 PKIHVLINNAGVSVPI  149 (384)
Q Consensus       134 g~id~lvnnAG~~~~~  149 (384)
                       .-|++|..+=+....
T Consensus        95 -~aDivI~aalipG~~  109 (168)
T d1pjca1          95 -EADLLIGAVLVPGRR  109 (168)
T ss_dssp             -TCSEEEECCCCTTSS
T ss_pred             -cCcEEEEeeecCCcc
Confidence             569999999874433

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.25  E-value=0.034  Score=45.05  Aligned_cols=39  Identities=15%  Similarity=0.089  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      .++.||++.|.| .|.||+.+|+.+..-|++|+..++...
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            578999999999 589999999999999999999887654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.12  E-value=0.17  Score=38.86  Aligned_cols=105  Identities=12%  Similarity=-0.016  Sum_probs=55.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKA-------TVVLGCRSMI--RGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKN  128 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~-------~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~  128 (384)
                      .|.|+||+|.+|.+++..|++.+.       .+++.+.+..  +++....++.... ......+  ..++..        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~--~~~~~~--------   73 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDV--IATDKE--------   73 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEE--EEESCH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-ccccccc--ccCccc--------
Confidence            689999999999999999987542       3555554432  2222222222211 1122222  222111        


Q ss_pred             HHHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHh
Q psy2854         129 VMKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIER  180 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  180 (384)
                       .+.....|++|..||.......   +.+   ..++.|..-.-.+.+.+.++
T Consensus        74 -~~~~~~~dvVVitag~~~~~g~---sr~---dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          74 -EIAFKDLDVAILVGSMPRRDGM---ERK---DLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             -HHHTTTCSEEEECCSCCCCTTC---CTT---TTHHHHHHHHHHHHHHHHHH
T ss_pred             -ccccCCceEEEEecccCCCCCC---chh---HHHHHhHHHHHHHHHHHHhh
Confidence             1123478999999998433211   222   24566665555555555554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.09  E-value=0.03  Score=43.75  Aligned_cols=84  Identities=18%  Similarity=0.129  Sum_probs=52.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHH-------HHHhcCCcEEEEEeecCCHHHHHHHH---HH
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL-------KKEVQDGQIVLMELNLASFDSIKNFA---KN  128 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dvs~~~~v~~~~---~~  128 (384)
                      +-|.| .|-+|..+|+.|++.|++|++.+|++++.++..+.-       .+..  .+...+..=+.+.+.+++++   +.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~--~~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIA--EQCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHH--HHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHH--hCCCeEEEEcCCHHHHHHHHhCCcc
Confidence            34444 589999999999999999999999987766554311       1111  11223444556677777765   33


Q ss_pred             HHHhCCCccEEEECCCC
Q psy2854         129 VMKQYPKIHVLINNAGV  145 (384)
Q Consensus       129 i~~~~g~id~lvnnAG~  145 (384)
                      +.....+=+++|...-.
T Consensus        80 ~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             hhhccCCCCEEEECCCC
Confidence            44444444566665443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.08  E-value=0.019  Score=45.06  Aligned_cols=40  Identities=18%  Similarity=0.096  Sum_probs=33.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQE   95 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   95 (384)
                      .|++++|.|+ |++|...+..+...|++|+++++++++.+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            4779999875 999999988888999999999998766543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.052  Score=46.73  Aligned_cols=25  Identities=16%  Similarity=0.138  Sum_probs=21.5

Q ss_pred             CCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          65 NSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        65 s~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      ||-.|.++|+++..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3578999999999999999988543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.94  E-value=0.035  Score=44.61  Aligned_cols=66  Identities=14%  Similarity=0.090  Sum_probs=45.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHH-------HHHHHhcCCcEEEEEeecCC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALE-------KLKKEVQDGQIVLMELNLAS  118 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~-------~l~~~~~~~~~~~~~~Dvs~  118 (384)
                      .+++++++.|.| .|.||+++++.|...|.+|+..+|.........+       ++.+......+..+.+.+++
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence            568999999999 5899999999999999999999986432221111       12222334556666666665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.025  Score=44.20  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=35.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR   92 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~   92 (384)
                      .+.||+++|.| .|-||+.+|+.+...|++|+++.+++.+
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch
Confidence            47899999999 4689999999999999999999998744

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.70  E-value=0.095  Score=41.76  Aligned_cols=40  Identities=25%  Similarity=0.174  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR   92 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~   92 (384)
                      .++.||++.|.| .|.||+++++.+...|++|+..++....
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            468999999999 5899999999999999999999887543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.60  E-value=0.0091  Score=46.28  Aligned_cols=37  Identities=14%  Similarity=0.242  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      .+++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999998 669999999999999999998754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.38  E-value=0.044  Score=41.02  Aligned_cols=73  Identities=14%  Similarity=0.197  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLG-CRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      .+.|.|++|-.|+++++.+.++|.+++.. +++...          ......   +..|+|.++...+.++...+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            48899999999999999999999997653 333211          011122   567999999999999988876  56


Q ss_pred             cEEEECCCC
Q psy2854         137 HVLINNAGV  145 (384)
Q Consensus       137 d~lvnnAG~  145 (384)
                      .+++-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            778877776

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.025  Score=51.68  Aligned_cols=64  Identities=20%  Similarity=0.205  Sum_probs=44.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHHHhcCCcEEEEE
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSM-------------------IRGQEALEKLKKEVQDGQIVLME  113 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  113 (384)
                      +++..|+|.|+ ||||.++++.|+..|. ++.+++.+.                   .|.+.+.+.+++..+..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            35668999998 7899999999999998 588887642                   23444455555555555555555


Q ss_pred             eecCC
Q psy2854         114 LNLAS  118 (384)
Q Consensus       114 ~Dvs~  118 (384)
                      .++.+
T Consensus       114 ~~i~~  118 (426)
T d1yovb1         114 NKIQD  118 (426)
T ss_dssp             SCGGG
T ss_pred             ccccc
Confidence            55543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.13  E-value=0.031  Score=41.83  Aligned_cols=70  Identities=13%  Similarity=0.106  Sum_probs=49.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      |.++|.|. +.+|++++++|.  |.+|+++..++++.+..    ..    ..+.++..|.++++.++++      ...+-
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~----~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LR----SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HH----TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hh----cCccccccccCCHHHHHHh------hhhcC
Confidence            56888885 789999999994  55677788887654433    22    2567888999998876653      23456


Q ss_pred             cEEEECC
Q psy2854         137 HVLINNA  143 (384)
Q Consensus       137 d~lvnnA  143 (384)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7776543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.12  E-value=0.19  Score=40.24  Aligned_cols=39  Identities=18%  Similarity=0.111  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      .+++||++.|.|. |.||+++|+.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            5788999999985 89999999999999999999887654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.96  E-value=0.064  Score=44.92  Aligned_cols=64  Identities=17%  Similarity=0.163  Sum_probs=45.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHHHhcCCcEEEE
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS-------------------MIRGQEALEKLKKEVQDGQIVLM  112 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  112 (384)
                      ++++++|+|.| .||+|..++..|++.|. ++.++|.+                   ..|.+.+.+.+++..+..++..+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            46788999999 58999999999999998 58887753                   12455555666665555555554


Q ss_pred             EeecC
Q psy2854         113 ELNLA  117 (384)
Q Consensus       113 ~~Dvs  117 (384)
                      ...++
T Consensus       106 ~~~~~  110 (247)
T d1jw9b_         106 NALLD  110 (247)
T ss_dssp             CSCCC
T ss_pred             hhhhh
Confidence            44443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.95  E-value=0.25  Score=38.71  Aligned_cols=80  Identities=11%  Similarity=0.048  Sum_probs=50.4

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhc----------------CCcEEEEEeecCCHHHHHHHHH
Q psy2854          64 ANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQ----------------DGQIVLMELNLASFDSIKNFAK  127 (384)
Q Consensus        64 as~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~----------------~~~~~~~~~Dvs~~~~v~~~~~  127 (384)
                      |.|-+|.++|++|++.|++|.+.+|++++.++..++-.....                -.....+..-+.+...+...++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            578999999999999999999999998777666544211000                0111222333444555666666


Q ss_pred             HHHHhCCCccEEEECC
Q psy2854         128 NVMKQYPKIHVLINNA  143 (384)
Q Consensus       128 ~i~~~~g~id~lvnnA  143 (384)
                      .......+=+++|+..
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6666555555666654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.85  E-value=0.17  Score=40.49  Aligned_cols=39  Identities=15%  Similarity=0.120  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      ..+.||++.|.| -|.||+++|+.+...|++|+..++...
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            579999999998 489999999999999999999888654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.85  E-value=0.15  Score=39.47  Aligned_cols=85  Identities=8%  Similarity=0.008  Sum_probs=52.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHH-------HHHhcCCcEEEEEeecCCHHHHHHHHHH--
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKL-------KKEVQDGQIVLMELNLASFDSIKNFAKN--  128 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~--  128 (384)
                      .|-+.| .|-+|.++|++|+++|++|.+.+|+.++.++....-       .+..  .....+..-+.+.+.++.++..  
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~--~~~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV--QGADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH--TSCSEEEECCSCHHHHHHHHHSTT
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhc--cccCeeeecccchhhHHHHHhccc
Confidence            344554 689999999999999999999999977655543221       1111  1223344555666777766543  


Q ss_pred             -HHHhCCCccEEEECCCC
Q psy2854         129 -VMKQYPKIHVLINNAGV  145 (384)
Q Consensus       129 -i~~~~g~id~lvnnAG~  145 (384)
                       +.....+=+++|...-+
T Consensus        80 ~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             CHHHHSCTTCEEEECSCC
T ss_pred             cccccCCCCCEEEECCCC
Confidence             33333333566665544

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.74  E-value=0.071  Score=42.72  Aligned_cols=38  Identities=21%  Similarity=0.022  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .++.++++.|.| .|.||+.+|+.+...|++|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            468999999997 68999999999999999999998764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.66  E-value=0.062  Score=43.41  Aligned_cols=72  Identities=21%  Similarity=0.120  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++.||+|+=-|+++|+   ++..++..|+ +|+.++.+++..+.+.+.      -.++.++.+|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc-----------
Confidence            46889999999998883   3445777786 599999886554433322      24578888998643           


Q ss_pred             HhCCCccEEEECCCC
Q psy2854         131 KQYPKIHVLINNAGV  145 (384)
Q Consensus       131 ~~~g~id~lvnnAG~  145 (384)
                        .+++|++|.|.-+
T Consensus       105 --~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --SGKYDTWIMNPPF  117 (197)
T ss_dssp             --CCCEEEEEECCCC
T ss_pred             --CCcceEEEeCccc
Confidence              2689999999654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.52  E-value=0.2  Score=40.37  Aligned_cols=76  Identities=21%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+++|++|+=-|+++|.   ++..++.+|+ +|+.++.+++..+.+.+.+...  +.+..++..|+.+.           
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC-----------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh-----------
Confidence            46889999999987772   3344567786 7999999987777666655433  45778888887543           


Q ss_pred             HhCCCccEEEECCCC
Q psy2854         131 KQYPKIHVLINNAGV  145 (384)
Q Consensus       131 ~~~g~id~lvnnAG~  145 (384)
                        .+++|++|.|.-+
T Consensus       107 --~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 --NSRVDIVIMNPPF  119 (201)
T ss_dssp             --CCCCSEEEECCCC
T ss_pred             --CCcCcEEEEcCcc
Confidence              3589999999865

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.51  E-value=0.075  Score=43.94  Aligned_cols=45  Identities=18%  Similarity=0.187  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHH
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL   97 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   97 (384)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|++++.+..+.....
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            468999999998 589999999999999999999988866554443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.46  E-value=0.079  Score=41.32  Aligned_cols=39  Identities=21%  Similarity=0.169  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .++.||.++|.|.|.=+|+-++..|.++|++|+++....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            368999999999999999999999999999998876543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.35  E-value=0.11  Score=38.98  Aligned_cols=76  Identities=13%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEE-EecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          58 VCIITGANSGIGYETAKELAKL-KATVVL-GCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~-G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ++.|.|++|-+|+++++...+. +++++. .++.. ...    .+...  +..   +..|+|.++...+.++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999987764 677654 33322 111    11111  122   568999999999999888765  5


Q ss_pred             ccEEEECCCC
Q psy2854         136 IHVLINNAGV  145 (384)
Q Consensus       136 id~lvnnAG~  145 (384)
                      +-+++-..|.
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            6778877776

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.067  Score=41.99  Aligned_cols=39  Identities=21%  Similarity=0.251  Sum_probs=35.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      +++||.++|.|.|.=+|+-++..|+++|++|.++.....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            689999999999999999999999999999998776543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.91  E-value=0.45  Score=36.74  Aligned_cols=87  Identities=16%  Similarity=0.069  Sum_probs=53.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHH-H-------hcCCcEEEEEeecCCHHHHHHHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKA--TVVLGCRSMIRGQEALEKLKK-E-------VQDGQIVLMELNLASFDSIKNFA  126 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~-~-------~~~~~~~~~~~Dvs~~~~v~~~~  126 (384)
                      |.+.|.|+ |-||.++|+.|.+.|.  +|+..+|+.+..+.+.+.-.. .       ........+.+ .+.++.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            35778875 9999999999999996  688889886665544332100 0       00001111111 22456788888


Q ss_pred             HHHHHhCCCccEEEECCCC
Q psy2854         127 KNVMKQYPKIHVLINNAGV  145 (384)
Q Consensus       127 ~~i~~~~g~id~lvnnAG~  145 (384)
                      +++......=.+++..++.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8887776655666666654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.79  E-value=0.048  Score=45.98  Aligned_cols=99  Identities=8%  Similarity=-0.041  Sum_probs=51.8

Q ss_pred             CcEEEEEecCcccCCccccCchHHHHHHHHHHHH-HH-HHhhcccccccccccccccCCCccccccCCCCcccccccccc
Q psy2854         240 GVDVSVVCPGWCYTNLFRHADIKFYQKVMIFPIA-MM-VVIVGSSLMDRGTIDFDNLNGEKGFVQKGHSNPAYCNSKLMN  317 (384)
Q Consensus       240 gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~-~~~s~s~~~~~~~i~f~~l~g~~~~~~~g~~~~~Y~~sKl~~  317 (384)
                      ++.....+.|........+...+.+...+...+. .+ +.........+..+.+....+..+.    .....|+.+|.+.
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~----~~~~~YaAaka~l  164 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA----PGLGGYAPGNAYL  164 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC----TTCTTTHHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC----cccHHHHHHHHhH
Confidence            5766666777766665555555444443222211 11 1111111111122333333332221    2345699999643


Q ss_pred             ccchHHHHHHhhcCCceEEEeecCceecc
Q psy2854         318 YYFGAELYLKYADKGVDVCVVCPGWCYTN  346 (384)
Q Consensus       318 ~~~~~ela~~l~~~~v~v~~~~pg~~~t~  346 (384)
                          ..|++++..+|+.+++|+||.+.+.
T Consensus       165 ----~~la~~~~~~Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         165 ----DGLAQQRRSDGLPATAVAWGTWAGS  189 (259)
T ss_dssp             ----HHHHHHHHHTTCCCEEEEECCBC--
T ss_pred             ----HHHHHHHHhCCCCEEECCCCcccCC
Confidence                5567777778999999999988643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.72  E-value=0.056  Score=41.96  Aligned_cols=34  Identities=18%  Similarity=0.015  Sum_probs=30.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIR   92 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~   92 (384)
                      .+.|.|+ |.+|..++..|++.|++|.+++|+.++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4778887 999999999999999999999998653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.72  E-value=0.14  Score=42.46  Aligned_cols=75  Identities=11%  Similarity=-0.027  Sum_probs=56.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ..+++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.....  +.++.++..|+.+.+           ..
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~~   99 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------IN   99 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------CS
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------cc
Confidence            456789999999885   78889999999999999987766665554432  457888888887643           12


Q ss_pred             CCccEEEECCC
Q psy2854         134 PKIHVLINNAG  144 (384)
Q Consensus       134 g~id~lvnnAG  144 (384)
                      ++.|++++..+
T Consensus       100 ~~fD~i~~~~~  110 (246)
T d1y8ca_         100 RKFDLITCCLD  110 (246)
T ss_dssp             CCEEEEEECTT
T ss_pred             ccccccceeee
Confidence            47999887544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.69  E-value=0.26  Score=35.51  Aligned_cols=70  Identities=17%  Similarity=0.146  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .+.++.|-| +|-+|+-++.+..+.|+++++.+.+++.-...          -.-.++..|..|.+.+.++++..     
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~----------va~~~i~~~~~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH----------VAHRSHVINMLDGDALRRVVELE-----   73 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG----------GSSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh----------cCCeEEECCCCCHHHHHHHHHhh-----
Confidence            345799999 57899999999999999999999875421110          11245778999999988887654     


Q ss_pred             CccEEE
Q psy2854         135 KIHVLI  140 (384)
Q Consensus       135 ~id~lv  140 (384)
                      .+|++.
T Consensus        74 ~~DviT   79 (111)
T d1kjqa2          74 KPHYIV   79 (111)
T ss_dssp             CCSEEE
T ss_pred             CCceEE
Confidence            678774

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.50  E-value=0.15  Score=37.07  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=30.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            367888886 8999999999999999999998874

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.31  E-value=0.14  Score=37.87  Aligned_cols=33  Identities=30%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      |.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            67888886 5799999999999999999999874

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.19  E-value=0.52  Score=37.06  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+|+=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+++..-..++.++++|..+          .....+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5778998998877   445567778889999999998888888777664333588888888522          223346


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ..|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999987754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.07  E-value=0.13  Score=37.89  Aligned_cols=35  Identities=26%  Similarity=0.205  Sum_probs=30.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      ++|.++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888875 7999999999999999999998864

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.93  E-value=0.38  Score=38.72  Aligned_cols=75  Identities=12%  Similarity=-0.062  Sum_probs=54.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +.+||=.||++|.   ++..|++.|++|+.++.+++..+.+.+.....  +..+..+..|..+..          ...+.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcC
Confidence            3478999999886   67789999999999999977766665555443  345677778877643          11247


Q ss_pred             ccEEEECCCC
Q psy2854         136 IHVLINNAGV  145 (384)
Q Consensus       136 id~lvnnAG~  145 (384)
                      .|+++.+..+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8998887654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.88  E-value=0.33  Score=37.42  Aligned_cols=82  Identities=21%  Similarity=0.236  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC---CHHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA---SFDSIKNFAKNVMK  131 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs---~~~~v~~~~~~i~~  131 (384)
                      +|+++.|.+.|||.|--++..+.+.|.++--.      .++..+++++..+.....--.+|++   +.+...++++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l------~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL------EEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC------CHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC------CHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            47788888889999999999999999877432      2455666666655433333456764   56667777766655


Q ss_pred             hCCCccEEEECC
Q psy2854         132 QYPKIHVLINNA  143 (384)
Q Consensus       132 ~~g~id~lvnnA  143 (384)
                      . +.+|.++...
T Consensus        76 d-~~vd~v~v~~   86 (163)
T d2csua3          76 D-PNVDMLIAIC   86 (163)
T ss_dssp             S-TTCSEEEEEE
T ss_pred             C-CCcCEEEEee
Confidence            4 6788766544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.84  E-value=0.52  Score=37.02  Aligned_cols=41  Identities=12%  Similarity=0.099  Sum_probs=33.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHH
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEAL   97 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~   97 (384)
                      .-.|+|.|| |-.|.+-++-....|++|.+.+.+.++.++..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            347888886 67889999999999999999999987766543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.84  E-value=0.18  Score=36.94  Aligned_cols=34  Identities=35%  Similarity=0.294  Sum_probs=29.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            367888875 8999999999999999999998864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.75  E-value=0.13  Score=37.81  Aligned_cols=35  Identities=23%  Similarity=0.121  Sum_probs=30.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      +|.++|.|| |-+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            578888885 89999999999999999999988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.74  E-value=0.19  Score=36.65  Aligned_cols=34  Identities=21%  Similarity=0.142  Sum_probs=30.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467888885 7999999999999999999999864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.71  E-value=0.3  Score=42.04  Aligned_cols=76  Identities=22%  Similarity=0.248  Sum_probs=53.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      ..+||+||-.|+++|+   ++..+++.|+ +|+.++.++. ...+.+...+.....++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3578999999999886   5667888897 6888888754 33344444443335678899999876531          


Q ss_pred             hCCCccEEEEC
Q psy2854         132 QYPKIHVLINN  142 (384)
Q Consensus       132 ~~g~id~lvnn  142 (384)
                      ...+.|++|..
T Consensus        99 ~~~~~D~Ivse  109 (311)
T d2fyta1          99 PVEKVDVIISE  109 (311)
T ss_dssp             SCSCEEEEEEC
T ss_pred             ccccceEEEEe
Confidence            12479999875

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.51  E-value=0.3  Score=40.83  Aligned_cols=72  Identities=18%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|++|+=.|+++|+   ++..+++.|++|+.++.++...+.+.+..+..  +.+..+++.|+.+.           ...+
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~~-----------~~~~  183 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEAA-----------LPFG  183 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHHH-----------GGGC
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEecccccc-----------cccc
Confidence            57899999999986   34467788999999999998888777766543  34556666664211           1235


Q ss_pred             CccEEEEC
Q psy2854         135 KIHVLINN  142 (384)
Q Consensus       135 ~id~lvnn  142 (384)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            89999877

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.47  E-value=0.13  Score=40.28  Aligned_cols=38  Identities=29%  Similarity=0.242  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      .+++||.++|.|-|.=+|+-+|..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47999999999999999999999999999999987654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.37  E-value=0.21  Score=36.66  Aligned_cols=32  Identities=31%  Similarity=0.296  Sum_probs=28.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            46777775 899999999999999999998876

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.14  E-value=0.29  Score=35.60  Aligned_cols=34  Identities=26%  Similarity=0.122  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            367888885 8999999999999999999988764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.99  E-value=0.19  Score=38.75  Aligned_cols=39  Identities=26%  Similarity=0.332  Sum_probs=35.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIR   92 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~   92 (384)
                      -+.||+++|.|= |-+|+.+|+++...|++|+++..++-+
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            478999999994 789999999999999999999988744

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.99  E-value=0.23  Score=39.92  Aligned_cols=38  Identities=18%  Similarity=0.120  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .++.||++.|.|. |.||+++|+.+..-|++|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            5789999999995 8899999999999999999998864

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.98  E-value=0.61  Score=39.26  Aligned_cols=78  Identities=17%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             CEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          57 KVCIITGANSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        57 k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      ++++-.|+++| ||.+++ +  ...++|+.++.+++.++-+.+..+...-..++.+...|+.+..         .+..++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~---------~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---------KEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---------GGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccccccc---------ccccCc
Confidence            45665666666 444443 2  3578999999998887777777655433356777788876542         234578


Q ss_pred             ccEEEECCCCC
Q psy2854         136 IHVLINNAGVS  146 (384)
Q Consensus       136 id~lvnnAG~~  146 (384)
                      +|++|.|.-+.
T Consensus       180 fDlIVsNPPYI  190 (271)
T d1nv8a_         180 IEMILSNPPYV  190 (271)
T ss_dssp             CCEEEECCCCB
T ss_pred             ccEEEEccccc
Confidence            99999998764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.96  E-value=0.15  Score=39.16  Aligned_cols=38  Identities=18%  Similarity=0.185  Sum_probs=30.9

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q psy2854          60 IITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALE   98 (384)
Q Consensus        60 lITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~   98 (384)
                      .|. |+|-+|.++++.|.+.|.++++.+|+.++.++..+
T Consensus         4 g~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~   41 (152)
T d2ahra2           4 GII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE   41 (152)
T ss_dssp             EEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH
T ss_pred             EEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc
Confidence            344 46899999999999999999999999776655444

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.84  E-value=2.2  Score=33.73  Aligned_cols=142  Identities=11%  Similarity=0.017  Sum_probs=78.9

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          52 KPMEGKVCIITGAN--SGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        52 ~~~~~k~vlITGas--~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      ....|.++++....  ...+.+++..|.+.|..++.+.-+..                         .+.+   .+.+. 
T Consensus        21 ~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~~---~l~~~-   71 (209)
T d2fr1a2          21 ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGRD---ELAER-   71 (209)
T ss_dssp             CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCHH---HHHHH-
T ss_pred             CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCHH---HHHHH-
Confidence            34567777776443  34777888888899988776543311                         1122   22222 


Q ss_pred             HHhCCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCcccccCCcCcCCCCcCcC
Q psy2854         130 MKQYPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSSLMDRGTIDFDNLNGEKG  207 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~~~~~~~~~~~~~~~~~~  207 (384)
                      ....+.++.+|+-.+....... . . +    .....+...+.++|.+...-.  ++.+++........           
T Consensus        72 ~~~~~~~~~vv~l~~~~~~~~~-~-~-~----~~~~~~~~~l~l~qal~~~~~~~~l~~vT~~a~~~~~-----------  133 (209)
T d2fr1a2          72 LRSVGEVAGVLSLLAVDEAEPE-E-A-P----LALASLADTLSLVQAMVSAELGCPLWTVTESAVATGP-----------  133 (209)
T ss_dssp             HTTSCCCSEEEECTTTTCCCCS-S-C-G----GGCHHHHHHHHHHHHHHHTTCCCCEEEEEESCSCSST-----------
T ss_pred             hhccCCCCeEEEeCCCCCCCCc-c-h-h----HHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCcccCC-----------
Confidence            2345678888888765322211 1 1 1    112234556677777765433  55666554322211           


Q ss_pred             cccCCCChhhhhhcHHHHHHHHHHHHHHhCCCCcEEEEE
Q psy2854         208 FVQKGHSNPAYCNSKLMNYYFGAELYLKYADKGVDVSVV  246 (384)
Q Consensus       208 ~~~~~~~~~~Y~aSK~a~~~~~~~la~e~~~~gI~v~~v  246 (384)
                            ....-....+++.+|+++++.|+....+++..+
T Consensus       134 ------~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         134 ------FERVRNAAHGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             ------TSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             ------CcccCCHhHHhHHHHHHHHHHhCCCceEEEEEC
Confidence                  111223467899999999999975444444444

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.68  E-value=0.18  Score=39.75  Aligned_cols=63  Identities=10%  Similarity=-0.025  Sum_probs=44.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh-----------cCCcEEEEEeecCCHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV-----------QDGQIVLMELNLASFD  120 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dvs~~~  120 (384)
                      .|++||.-|++.|   ..+..|+++|++|+.++.+++.++.+.+..++..           ......++.+|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            5789999999888   4777999999999999999776666555442210           0233466777776654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=0.23  Score=36.02  Aligned_cols=33  Identities=24%  Similarity=0.096  Sum_probs=28.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777775 8999999999999999999998874

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.39  E-value=0.95  Score=34.23  Aligned_cols=79  Identities=10%  Similarity=0.054  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCc-hhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          53 PMEGKVCIITGANSG-IGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        53 ~~~~k~vlITGas~G-IG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .++|+.||=.|+++| +|.    +.+++|+ +|+.++.+++..+...+.+.......++.+++.|..+      +.   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            467899987777655 444    4567887 6999999877666665555443223568888888532      22   2


Q ss_pred             HhCCCccEEEECCC
Q psy2854         131 KQYPKIHVLINNAG  144 (384)
Q Consensus       131 ~~~g~id~lvnnAG  144 (384)
                      ...++.|+++.+.-
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            33467999987653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.26  E-value=0.62  Score=37.63  Aligned_cols=80  Identities=14%  Similarity=0.067  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+|+-.|+++|--.+...++...+.+|+.++.+++..+.+.+.+... .-.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-cccccccccCchHHcc----------cccc
Confidence            4779999999888776666666666779999999988877777766543 2356777777765321          1225


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      +.|.++.+++.
T Consensus       144 ~fD~I~~~~~~  154 (213)
T d1dl5a1         144 PYDVIFVTVGV  154 (213)
T ss_dssp             CEEEEEECSBB
T ss_pred             chhhhhhhccH
Confidence            79999988875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.23  E-value=0.22  Score=38.00  Aligned_cols=39  Identities=13%  Similarity=0.144  Sum_probs=30.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhHHHHHH
Q psy2854          59 CIITGANSGIGYETAKELAKLK-ATVVLGCRSMIRGQEALE   98 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G-~~Vi~~~r~~~~~~~~~~   98 (384)
                      +.+.|+ |-+|.++++.|.+.| .+|++.+|++++.++..+
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK   42 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence            445565 999999999999887 889999999766555443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.10  E-value=0.28  Score=37.42  Aligned_cols=36  Identities=19%  Similarity=0.172  Sum_probs=29.2

Q ss_pred             CCEEEE-eCCCCchhHHHHHHHHHCCCEEEEEecCch
Q psy2854          56 GKVCII-TGANSGIGYETAKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        56 ~k~vlI-TGas~GIG~a~a~~l~~~G~~Vi~~~r~~~   91 (384)
                      ++.++| -.+++-||.++|..|+++|.+|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            444444 456789999999999999999999998753

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.09  E-value=2.9  Score=35.83  Aligned_cols=116  Identities=12%  Similarity=0.045  Sum_probs=69.1

Q ss_pred             CCCEEEEeCCC-CchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGAN-SGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas-~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .|++||=.|+. |+++.+    +++.|+ +|+.++.+++.++.+.+.+....-..++.++..|+.      +..+.....
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            37888877765 444443    456676 699999998877777666654322246777777764      233444445


Q ss_pred             CCCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCc
Q psy2854         133 YPKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSS  190 (384)
Q Consensus       133 ~g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~  190 (384)
                      ..+.|++|.+.-....      +..+....    ......+.+.+.+.++  .++..+|.
T Consensus       215 ~~~fD~Vi~DpP~~~~------~~~~~~~~----~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ------HEKDLKAG----LRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             TCCEEEEEECCCCSCS------SGGGHHHH----HHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             cCCCCchhcCCccccC------CHHHHHHH----HHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            5689999998764322      12221111    2234456667777776  35555443

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.68  Score=37.66  Aligned_cols=42  Identities=19%  Similarity=-0.008  Sum_probs=33.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEK   99 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~   99 (384)
                      .+++||.-|++.|   ..+..|+++|++|+.++-+++..+.+.++
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            5779999999887   56888999999999999987665554443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=90.06  E-value=1.7  Score=31.09  Aligned_cols=81  Identities=20%  Similarity=0.226  Sum_probs=56.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHHhCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFD-SIKNFAKNVMKQYP  134 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~i~~~~g  134 (384)
                      ||+++|.=-..-+...+...|.+.|++|+..+.+.   +++.+.+++.  ...+  +-+|+.=++ +--++++++++...
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~--~~dl--iilD~~mp~~~G~e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKEL--KPDI--VTMDITMPEMNGIDAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH--CCSE--EEEECSCGGGCHHHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhc--cCCE--EEEecCCCCCCHHHHHHHHHHhCC
Confidence            78899999999999999999999999987655553   4455555543  2344  445554322 34457788888777


Q ss_pred             CccEEEECC
Q psy2854         135 KIHVLINNA  143 (384)
Q Consensus       135 ~id~lvnnA  143 (384)
                      .+-+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            777776653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.84  E-value=0.27  Score=38.82  Aligned_cols=38  Identities=21%  Similarity=0.088  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      +..++|.|+|.|| |--|.+.|..|+++|++|.+..++.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            3456789999996 7889999999999999999998865

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.67  E-value=0.3  Score=35.46  Aligned_cols=36  Identities=17%  Similarity=0.159  Sum_probs=31.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      ..+|.++|.|| |-||.++|..|++.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            34788988885 8999999999999999999998864

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.58  E-value=0.61  Score=37.79  Aligned_cols=79  Identities=18%  Similarity=0.058  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+||..|+++|--.++.-+++  |.+|+.+.++++-.+.+.+.+.+. +-.++.++..|..+-.          ...+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g~----------~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKGF----------PPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccCC----------cccC
Confidence            46799999999998888877776  567999999876666666555543 3478999999986421          2236


Q ss_pred             CccEEEECCCCC
Q psy2854         135 KIHVLINNAGVS  146 (384)
Q Consensus       135 ~id~lvnnAG~~  146 (384)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999988873

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.31  E-value=0.24  Score=36.26  Aligned_cols=33  Identities=24%  Similarity=0.196  Sum_probs=29.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      |.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            67888885 7899999999999999999988864

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.22  E-value=0.47  Score=34.81  Aligned_cols=34  Identities=18%  Similarity=0.090  Sum_probs=30.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478888885 8999999999999999999998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.84  E-value=3.5  Score=35.19  Aligned_cols=117  Identities=15%  Similarity=0.096  Sum_probs=69.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .+|++||=.++..| |.++  +++..|.+|+.++.++..++.+.+.++.. +-.++.++..|..+      +.+......
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~n-gl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLN-GLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHc-CCCCcceeeccHHH------HhhhhHhhh
Confidence            57889987776554 3333  34556778999999988877777666543 22467888888643      233344445


Q ss_pred             CCccEEEECCCCCCCCCCCCCChhhHHHHhchhhhHHHHHHHHHHHhcC--cEEEEcCc
Q psy2854         134 PKIHVLINNAGVSVPIKEKLTTKEGYEVHFGINHVGHFLLTNLLIERIQ--KVVIVGSS  190 (384)
Q Consensus       134 g~id~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~--~iv~vsS~  190 (384)
                      ++.|++|.+.-......      .+...    -......+.+.+.+.++  .++..+|.
T Consensus       214 ~~fD~Vi~DpP~~~~~~------~~~~~----~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGK------KDVER----AYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             CCEEEEEECCCCSCCST------TSHHH----HHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cCCCEEEEcCCccccch------HHHHH----HHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            68999999975432221      11111    11223346666777776  35555444

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.83  E-value=0.44  Score=37.92  Aligned_cols=80  Identities=18%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCcc
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKIH  137 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id  137 (384)
                      ++=+|-|+||.-+++.+.+ . +.+|+.++++++.++.+.+.+...  +.++.++..+.++...+   .+..  ..+.+|
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~~vd   97 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIEKVD   97 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCCCcc
Confidence            3336888889888888876 3 578999999988777766665443  46799999988765432   2221  135899


Q ss_pred             EEEECCCCC
Q psy2854         138 VLINNAGVS  146 (384)
Q Consensus       138 ~lvnnAG~~  146 (384)
                      .++...|+.
T Consensus        98 gIl~DlGvS  106 (192)
T d1m6ya2          98 GILMDLGVS  106 (192)
T ss_dssp             EEEEECSCC
T ss_pred             eeeeccchh
Confidence            999999984

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.76  E-value=0.93  Score=36.84  Aligned_cols=81  Identities=14%  Similarity=0.073  Sum_probs=60.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEV----QDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .|.+||-.|+++|--.++.-++.....+|+.++++++-.+.+.+.+.+..    ...++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            47799999999998888888888888899999999887777777665431    2346777777865321          


Q ss_pred             HhCCCccEEEECCCC
Q psy2854         131 KQYPKIHVLINNAGV  145 (384)
Q Consensus       131 ~~~g~id~lvnnAG~  145 (384)
                      ...++.|.++.+++.
T Consensus       146 ~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGGCCEEEEEECSBB
T ss_pred             chhhhhhhhhhhcch
Confidence            123579999999876

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.74  E-value=0.98  Score=31.33  Aligned_cols=71  Identities=11%  Similarity=0.017  Sum_probs=44.6

Q ss_pred             CCCEEEEeCCCCchh-HHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIG-YETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG-~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.|.+.+.|- +|+| .++|+.|.++|++|...|+......   +.+.+.  +  +.+...+-  ++.+           
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~--G--i~v~~g~~--~~~i-----------   65 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQA--G--AKIYIGHA--EEHI-----------   65 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHT--T--CEEEESCC--GGGG-----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHC--C--CeEEECCc--cccC-----------
Confidence            4567878875 5566 4679999999999999998754332   333332  2  33332221  2211           


Q ss_pred             CCccEEEECCCCC
Q psy2854         134 PKIHVLINNAGVS  146 (384)
Q Consensus       134 g~id~lvnnAG~~  146 (384)
                      .+.|.+|...++.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            2679999998883

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.55  E-value=0.62  Score=38.23  Aligned_cols=74  Identities=15%  Similarity=-0.013  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +++++|=.|+++|   ..+..|+++|++|+.++.+++-++.+.+...+.  +.++.++..|+.+..           ..+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------ccc
Confidence            4578999999887   456779999999999999976666666555443  447888999987643           114


Q ss_pred             CccEEEECCC
Q psy2854         135 KIHVLINNAG  144 (384)
Q Consensus       135 ~id~lvnnAG  144 (384)
                      ..|++++.-+
T Consensus       105 ~fD~I~~~~~  114 (251)
T d1wzna1         105 EFDAVTMFFS  114 (251)
T ss_dssp             CEEEEEECSS
T ss_pred             ccchHhhhhh
Confidence            6898887533

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=88.53  E-value=0.27  Score=40.38  Aligned_cols=33  Identities=27%  Similarity=0.310  Sum_probs=28.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      .|.|+|.|| |-.|.++|.+|+++|++|.++.|+
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            456888886 788999999999999999999886

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.14  E-value=0.29  Score=35.29  Aligned_cols=34  Identities=24%  Similarity=0.202  Sum_probs=29.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367777775 8999999999999999999988864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=87.74  E-value=0.27  Score=39.15  Aligned_cols=37  Identities=16%  Similarity=0.105  Sum_probs=30.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHH
Q psy2854          57 KVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQ   94 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~   94 (384)
                      +.+.|.|| |-.|.++|..|++.|.+|.+.+|+++..+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~   44 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVR   44 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHH
Confidence            45778886 56899999999999999999999855443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.65  E-value=0.28  Score=35.92  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=30.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            468888885 8999999999999999999998875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.65  E-value=0.39  Score=35.66  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=30.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.+..
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            578888875 8999999999999999999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.59  E-value=0.4  Score=36.44  Aligned_cols=32  Identities=13%  Similarity=-0.007  Sum_probs=27.0

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEecCchhHHH
Q psy2854          64 ANSGIGYETAKELAKLKATVVLGCRSMIRGQE   95 (384)
Q Consensus        64 as~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~   95 (384)
                      |.|-+|.++|+.|+++|++|+..+++..+...
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            46999999999999999999998887655443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.37  E-value=0.29  Score=41.09  Aligned_cols=33  Identities=21%  Similarity=0.111  Sum_probs=28.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~   89 (384)
                      +|.|+|.|| |-=|.+.|.+|+++|++|.+..++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578888886 566889999999999999998765

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.21  E-value=0.86  Score=39.13  Aligned_cols=76  Identities=20%  Similarity=0.202  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+||+||-.|+++|+   ++..+++.|+ +|+.++.++ ....+.+..+...-..++.++..|+.+.+          ..
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence            468999999999885   5667888886 588888764 34444443333323467899999987653          12


Q ss_pred             CCCccEEEECC
Q psy2854         133 YPKIHVLINNA  143 (384)
Q Consensus       133 ~g~id~lvnnA  143 (384)
                      .+++|+++..-
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            24789998763

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.09  E-value=0.26  Score=38.77  Aligned_cols=34  Identities=18%  Similarity=0.128  Sum_probs=28.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKAT-VVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~-Vi~~~r~~   90 (384)
                      +|+|+|.|| |-.|.+.|..|+++|++ |.+..|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            567888885 78899999999999995 88888764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.88  E-value=0.4  Score=38.44  Aligned_cols=34  Identities=18%  Similarity=-0.108  Sum_probs=28.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhH
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRG   93 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~   93 (384)
                      +.|. |.|-+|..+|..|+++|++|++.+.+.++.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i   36 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            3444 579999999999999999999999885443

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.82  E-value=0.33  Score=40.60  Aligned_cols=35  Identities=29%  Similarity=0.415  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGC   87 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~   87 (384)
                      .+++||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            368999999999 68999999999999999988764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.55  E-value=0.29  Score=41.23  Aligned_cols=37  Identities=24%  Similarity=0.220  Sum_probs=31.7

Q ss_pred             CCCEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEecCch
Q psy2854          55 EGKVCIITGANSGIGYET-----AKELAKLKATVVLGCRSMI   91 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~-----a~~l~~~G~~Vi~~~r~~~   91 (384)
                      .++.++|+.|=||.|+.+     |..|+++|.+|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            466777887799999987     7889999999999999865

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=86.54  E-value=0.97  Score=36.79  Aligned_cols=75  Identities=15%  Similarity=-0.038  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      .|.+||-.|+++|--   +..|++.+.+|+.+.++++..+.+.+.+. .  ..++.++..|..+-.          ...+
T Consensus        70 ~g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g~----------~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLGY----------EEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCCHH---HHHHHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhcc----------hhhh
Confidence            467999999988854   33566777899999988766555544332 2  357888888875411          1235


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      +.|.++.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            79999988875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=86.36  E-value=0.22  Score=40.01  Aligned_cols=31  Identities=13%  Similarity=0.082  Sum_probs=27.2

Q ss_pred             CEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEe
Q psy2854          57 KVCIITGANSGIGYET-----AKELAKLKATVVLGC   87 (384)
Q Consensus        57 k~vlITGas~GIG~a~-----a~~l~~~G~~Vi~~~   87 (384)
                      |...|||.++|.|+.+     |+.|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            6899999999999875     678889999999876

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=86.01  E-value=1.3  Score=34.12  Aligned_cols=78  Identities=17%  Similarity=0.063  Sum_probs=46.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +|++++=-|+++|.   ++-+.+++|++|+.++.+++..+.+.+.++...-..++.  ..|.   +   .+.........
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~--~~~~---d---~~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVV--ALPV---E---VFLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEE--CSCH---H---HHHHHHHHTTC
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhcccccee--eeeh---h---cccccccccCC
Confidence            46677755655542   334567789999999999877777766665542223332  2222   2   12233333445


Q ss_pred             CccEEEECC
Q psy2854         135 KIHVLINNA  143 (384)
Q Consensus       135 ~id~lvnnA  143 (384)
                      +.|+++.+.
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            799998875

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.93  E-value=1  Score=34.20  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=52.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcC----CcEEEEEeecCCHHHHHHHHHHHHHhCC
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQD----GQIVLMELNLASFDSIKNFAKNVMKQYP  134 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~i~~~~g  134 (384)
                      +-+.| .|-+|..+|++|++.|+.+ +..|+.++..+..++.......    .....+...+.+.+.+....+.+.+...
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            34455 4889999999999988765 5788877766655543211000    1222333455567777777777766555


Q ss_pred             CccEEEECCCC
Q psy2854         135 KIHVLINNAGV  145 (384)
Q Consensus       135 ~id~lvnnAG~  145 (384)
                      +-.++|.+.-.
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            55566655533

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.08  E-value=3.7  Score=31.77  Aligned_cols=80  Identities=5%  Similarity=0.083  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCC-CCchhHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          54 MEGKVCIITGA-NSGIGYETAKELAKLKAT-VVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        54 ~~~k~vlITGa-s~GIG~a~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      .+|+++|=-.| ||++|.+    .+++|++ |+.++.+.+..+...+.+.......++.++..|+.      +++++..+
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhcc
Confidence            56788775444 5556664    6678885 99999997777766666654433357888888864      34455545


Q ss_pred             hCCCccEEEECC
Q psy2854         132 QYPKIHVLINNA  143 (384)
Q Consensus       132 ~~g~id~lvnnA  143 (384)
                      ...+.|+++...
T Consensus       110 ~~~~fDlIflDP  121 (182)
T d2fhpa1         110 EKLQFDLVLLDP  121 (182)
T ss_dssp             TTCCEEEEEECC
T ss_pred             cCCCcceEEech
Confidence            556799998665

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.06  E-value=0.54  Score=38.90  Aligned_cols=34  Identities=35%  Similarity=0.377  Sum_probs=31.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGC   87 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~   87 (384)
                      +++||+|+|-| .|-.|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68999999998 78999999999999999988665

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.04  E-value=0.95  Score=30.93  Aligned_cols=68  Identities=16%  Similarity=0.080  Sum_probs=43.1

Q ss_pred             EEEEeCCCCchhH-HHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCc
Q psy2854          58 VCIITGANSGIGY-ETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPKI  136 (384)
Q Consensus        58 ~vlITGas~GIG~-a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i  136 (384)
                      ++-+.| -+|+|. ++|+.|.++|+.|...|++.....+   .|++.  +.++. ..-|..+              ....
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~--Gi~i~-~gh~~~~--------------i~~~   61 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKL--GIPIF-VPHSADN--------------WYDP   61 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHT--TCCEE-SSCCTTS--------------CCCC
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHC--CCeEE-eeecccc--------------cCCC
Confidence            344554 567776 7899999999999999988643333   34443  22322 1123222              1368


Q ss_pred             cEEEECCCCC
Q psy2854         137 HVLINNAGVS  146 (384)
Q Consensus       137 d~lvnnAG~~  146 (384)
                      |.+|...++.
T Consensus        62 d~vV~SsAI~   71 (89)
T d1j6ua1          62 DLVIKTPAVR   71 (89)
T ss_dssp             SEEEECTTCC
T ss_pred             CEEEEecCcC
Confidence            9999999884

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.98  E-value=0.6  Score=39.63  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAKLKATVVLGC   87 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~   87 (384)
                      .+++||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4689999999996 8999999999999999988765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=84.95  E-value=0.9  Score=37.47  Aligned_cols=79  Identities=6%  Similarity=-0.020  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      ++++||=.|++.|   ..+..+++.|. +|+.++.+++.++.+.+.........++.+.++|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            4678999999877   24556777775 7999999987777766555443233578889999854320         012


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +..|+++.+-++
T Consensus        92 ~~fD~V~~~~~l  103 (252)
T d1ri5a_          92 KEFDVISSQFSF  103 (252)
T ss_dssp             SCEEEEEEESCG
T ss_pred             ccceEEEEccee
Confidence            468998877655

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.83  E-value=0.5  Score=38.89  Aligned_cols=35  Identities=17%  Similarity=0.147  Sum_probs=30.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEe
Q psy2854          52 KPMEGKVCIITGANSGIGYETAKELAK-LKATVVLGC   87 (384)
Q Consensus        52 ~~~~~k~vlITGas~GIG~a~a~~l~~-~G~~Vi~~~   87 (384)
                      .+++|++++|-| .|-+|..+|+.|++ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            367899999997 79999999999985 599988765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.72  E-value=0.83  Score=37.16  Aligned_cols=37  Identities=27%  Similarity=0.223  Sum_probs=31.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          53 PMEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        53 ~~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .-.+|.++|.|| |--|.+.|.+|+++|++|.+..++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            346789999996 6678999999999999999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.45  E-value=0.41  Score=39.89  Aligned_cols=31  Identities=26%  Similarity=0.195  Sum_probs=27.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          59 CIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        59 vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      |+|.|| |-.|.++|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677775 7889999999999999999998864

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.42  E-value=0.56  Score=36.76  Aligned_cols=42  Identities=19%  Similarity=0.204  Sum_probs=31.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKK  102 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~  102 (384)
                      .+.|.|| |-.|.++|..|++.|.+|.+.+|..+  ++..+.+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhh
Confidence            3557775 88999999999999999999998644  334455543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.34  E-value=4.1  Score=34.59  Aligned_cols=80  Identities=11%  Similarity=-0.020  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          55 EGKVCIITGANSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        55 ~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ++++||=..+.+| ++.    .+++.|++|+.++.+...++.+.+..... ....++.++..|+.      +++++..+.
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            4677886665544 333    45678999999999987777776665443 12346788877763      344555555


Q ss_pred             CCCccEEEECCC
Q psy2854         133 YPKIHVLINNAG  144 (384)
Q Consensus       133 ~g~id~lvnnAG  144 (384)
                      ..+.|++|.+.-
T Consensus       202 ~~~fD~IilDPP  213 (309)
T d2igta1         202 GSTYDIILTDPP  213 (309)
T ss_dssp             TCCBSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            568999998854

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.47  E-value=2  Score=34.70  Aligned_cols=81  Identities=14%  Similarity=0.053  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CC----CEEEEEecCchhHHHHHHHHHHH----hcCCcEEEEEeecCCHHHHHHH
Q psy2854          55 EGKVCIITGANSGIGYETAKELAK-LK----ATVVLGCRSMIRGQEALEKLKKE----VQDGQIVLMELNLASFDSIKNF  125 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~-~G----~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dvs~~~~v~~~  125 (384)
                      .|.+||..|+++|--.++.-+++. .|    .+|+.+.++++-.+.+.+.+...    ..-.++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            468999999999988888777764 34    48999999877666555544322    12357888888876421     


Q ss_pred             HHHHHHhCCCccEEEECCCC
Q psy2854         126 AKNVMKQYPKIHVLINNAGV  145 (384)
Q Consensus       126 ~~~i~~~~g~id~lvnnAG~  145 (384)
                           ...++.|.++.+++.
T Consensus       155 -----~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAA  169 (223)
T ss_dssp             -----GGGCSEEEEEECSCB
T ss_pred             -----ccccceeeEEEEeec
Confidence                 223589999998886

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.43  E-value=3.1  Score=32.46  Aligned_cols=78  Identities=17%  Similarity=0.087  Sum_probs=54.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKE-VQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      ..+++|+=.|+++|   .++..+++.+.+|+.++.++...+.+.+.+... ....++.++..|+.+.-  .         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~---------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--K---------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--T---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--c---------
Confidence            45788998998877   445667788899999999877666665555432 12346888889976421  1         


Q ss_pred             CCCccEEEECCCC
Q psy2854         133 YPKIHVLINNAGV  145 (384)
Q Consensus       133 ~g~id~lvnnAG~  145 (384)
                      .+..|+++.|.-+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            2479999988643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=83.30  E-value=0.76  Score=37.69  Aligned_cols=34  Identities=24%  Similarity=0.086  Sum_probs=28.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      .+.|+|.|| |--|..+|..|+++|.+|++..|+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            457888886 6678889999999999999998764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=83.26  E-value=0.65  Score=35.56  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=29.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCc
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKA--TVVLGCRSM   90 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~--~Vi~~~r~~   90 (384)
                      .||+++|.|| |-.|.++|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4889999997 6779999999999874  788877664

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=83.20  E-value=5.9  Score=28.02  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=54.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecC--CHHHHHHHHHHHHHhC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLA--SFDSIKNFAKNVMKQY  133 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs--~~~~v~~~~~~i~~~~  133 (384)
                      +|+++|.=-...+-..+.+.|.+.|++|..+.    ..+++.+.+.+.  ...+  +-+|+.  +.+. -++++++++..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~----~g~eal~~~~~~--~~dl--illD~~mP~~~G-~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA----NGLQALDIVTKE--RPDL--VLLDMKIPGMDG-IEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES----SHHHHHHHHHHH--CCSE--EEEESCCTTCCH-HHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC----CHHHHHHHHHhC--CCCE--EEEeccCCCCCH-HHHHHHHHHhC
Confidence            47889998899999999999999999988643    234555555544  2334  455555  4443 35777888877


Q ss_pred             CCccEEEECC
Q psy2854         134 PKIHVLINNA  143 (384)
Q Consensus       134 g~id~lvnnA  143 (384)
                      ..+-+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            7777776654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.10  E-value=4.7  Score=29.69  Aligned_cols=86  Identities=10%  Similarity=-0.028  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCC---CchhHHHHHHHHHCCCEEEEEecCchhHH--HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          55 EGKVCIITGAN---SGIGYETAKELAKLKATVVLGCRSMIRGQ--EALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        55 ~~k~vlITGas---~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      +.|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...  .....+.+.  ...+..+ .=...++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl--p~~iD~v-~i~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI--PDKIEVV-DLFVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC--SSCCSEE-EECSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc--CccceEE-EEEeCHHHHHHHHHHH
Confidence            35789999999   57999999999999999998866532111  001111110  1112211 1124577888888888


Q ss_pred             HHhCCCccEEEECCCC
Q psy2854         130 MKQYPKIHVLINNAGV  145 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~  145 (384)
                      .+.  ++..++...|.
T Consensus        95 ~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          95 IKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHH--TCSEEEECTTC
T ss_pred             HHh--CCCEEEEeccc
Confidence            876  46778887775

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.87  E-value=0.6  Score=40.03  Aligned_cols=32  Identities=19%  Similarity=0.146  Sum_probs=23.0

Q ss_pred             CEEEEeCCCCchhH-----HHHHHHHHCCCEEEEEecC
Q psy2854          57 KVCIITGANSGIGY-----ETAKELAKLKATVVLGCRS   89 (384)
Q Consensus        57 k~vlITGas~GIG~-----a~a~~l~~~G~~Vi~~~r~   89 (384)
                      |.++|++|++| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45566555445 54     6889999999999877654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=82.36  E-value=4.9  Score=30.13  Aligned_cols=30  Identities=27%  Similarity=0.220  Sum_probs=24.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEE
Q psy2854          57 KVCIITGANSGIGYETAKELAKL--KATVVLG   86 (384)
Q Consensus        57 k~vlITGas~GIG~a~a~~l~~~--G~~Vi~~   86 (384)
                      |.+.|-|+||-||..+..-+.+.  .++|+..
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~L   33 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVAL   33 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEE
Confidence            57899999999999999988876  4676554

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.01  E-value=0.59  Score=37.83  Aligned_cols=35  Identities=20%  Similarity=0.277  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYET-----AKELAKLKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~-----a~~l~~~G~~Vi~~~r~~   90 (384)
                      ||++.|+|+-||.|+.+     |..|+++|.+|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            68999999999999875     667788999999998653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.01  E-value=0.4  Score=44.66  Aligned_cols=35  Identities=17%  Similarity=0.142  Sum_probs=29.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRS   89 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~   89 (384)
                      +++..|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            55678999986 7999999999999997 58887653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=81.98  E-value=1.8  Score=33.39  Aligned_cols=76  Identities=24%  Similarity=0.191  Sum_probs=43.6

Q ss_pred             EEEEeCCCCchhH--HHHHHHHHC----CCEEEEEecCchhHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGY--ETAKELAKL----KATVVLGCRSMIRGQEALEKLKKEVQ--DGQIVLMELNLASFDSIKNFAKNV  129 (384)
Q Consensus        58 ~vlITGas~GIG~--a~a~~l~~~----G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i  129 (384)
                      .+.|.|| |.+|.  ++...++..    +.++++.++++++++.....+.....  +....+..  -+|.+   +.+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~---eaL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLD---DVI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHH---HHH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChh---hcc---
Confidence            4556665 44554  455555543    45899999999888765555544321  22222221  22332   222   


Q ss_pred             HHhCCCccEEEECCCCC
Q psy2854         130 MKQYPKIHVLINNAGVS  146 (384)
Q Consensus       130 ~~~~g~id~lvnnAG~~  146 (384)
                          ...|++|+.++..
T Consensus        75 ----~dad~Vv~~~~~g   87 (171)
T d1obba1          75 ----IDADFVINTAMVG   87 (171)
T ss_dssp             ----TTCSEEEECCCTT
T ss_pred             ----cCCCeEeeecccc
Confidence                3789999999874

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.26  E-value=1.2  Score=31.84  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=26.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCc
Q psy2854          56 GKVCIITGANSGIGYETAKELAK---LKATVVLGCRSM   90 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~---~G~~Vi~~~r~~   90 (384)
                      .|.++|.|| |.+|.++|..|.+   +|.+|.++.|..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            467888887 8999999976665   456799888764

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.11  E-value=2.4  Score=36.27  Aligned_cols=76  Identities=22%  Similarity=0.225  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKA-TVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQ  132 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~  132 (384)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++ ....+.+..++.....++.++..|+.+.+          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            468999999999884   4567788897 588888764 33344444444333467889999987643          11


Q ss_pred             CCCccEEEECC
Q psy2854         133 YPKIHVLINNA  143 (384)
Q Consensus       133 ~g~id~lvnnA  143 (384)
                      ....|+++..-
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            24789988764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=80.86  E-value=2.3  Score=35.05  Aligned_cols=76  Identities=18%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          55 EGKVCIITGANSG-IGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        55 ~~k~vlITGas~G-IG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      .|.+|+=.|+++| +..++|+.+. .+.+|+.++++++..+.+.+.+.+.....++.+...|+.+.-           ..
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence            4789999998877 3455555543 345899999998888888887766544578888899987631           11


Q ss_pred             CCccEEEEC
Q psy2854         134 PKIHVLINN  142 (384)
Q Consensus       134 g~id~lvnn  142 (384)
                      +.+|.++.+
T Consensus       153 ~~fD~V~ld  161 (250)
T d1yb2a1         153 QMYDAVIAD  161 (250)
T ss_dssp             CCEEEEEEC
T ss_pred             ceeeeeeec
Confidence            468988875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=80.73  E-value=0.76  Score=38.93  Aligned_cols=35  Identities=29%  Similarity=0.174  Sum_probs=29.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q psy2854          55 EGKVCIITGANSGIGYETAKELAKLKATVVLGCRSM   90 (384)
Q Consensus        55 ~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~   90 (384)
                      +.|.|+|.|| |--|...|..|+++|.+|.+..++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999996 5669999999999999999987753

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.68  E-value=4  Score=31.78  Aligned_cols=77  Identities=9%  Similarity=-0.035  Sum_probs=52.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Q psy2854          54 MEGKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQY  133 (384)
Q Consensus        54 ~~~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~  133 (384)
                      +.++.||=.|++.|.   .+..|+++|++|+.++.++..++.+.+...+. +-..+.+...|+.+..           --
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~d~~~~~-----------~~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE-GLDNLQTDLVDLNTLT-----------FD   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEECCTTTCC-----------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc-cccchhhhheeccccc-----------cc
Confidence            455689999986553   66788999999999999877666554443332 2245777778876543           01


Q ss_pred             CCccEEEECCCC
Q psy2854         134 PKIHVLINNAGV  145 (384)
Q Consensus       134 g~id~lvnnAG~  145 (384)
                      +..|+++.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            468998876644

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.47  E-value=2.1  Score=32.90  Aligned_cols=77  Identities=12%  Similarity=0.088  Sum_probs=40.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHH-C----CCEEEEEecCchhHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHH
Q psy2854          58 VCIITGANSGIGYETAKELAK-L----KATVVLGCRSMIRGQEALEKLKKEV--QDGQIVLMELNLASFDSIKNFAKNVM  130 (384)
Q Consensus        58 ~vlITGas~GIG~a~a~~l~~-~----G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~  130 (384)
                      .+.|.||++.-...++..++. .    +.++++.+.++++++...+.+....  .+........  +|..   +.     
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---ea-----   74 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---EA-----   74 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---HH-----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---hc-----
Confidence            355557654322223333333 2    2479999999998875555544321  1222222211  1221   11     


Q ss_pred             HhCCCccEEEECCCCC
Q psy2854         131 KQYPKIHVLINNAGVS  146 (384)
Q Consensus       131 ~~~g~id~lvnnAG~~  146 (384)
                        ...-|++|+.||..
T Consensus        75 --l~~AD~Vvitag~~   88 (167)
T d1u8xx1          75 --FTDVDFVMAHIRVG   88 (167)
T ss_dssp             --HSSCSEEEECCCTT
T ss_pred             --cCCCCEEEECCCcC
Confidence              13789999999984

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=80.33  E-value=2.7  Score=33.48  Aligned_cols=76  Identities=11%  Similarity=0.016  Sum_probs=53.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCC
Q psy2854          56 GKVCIITGANSGIGYETAKELAKLKATVVLGCRSMIRGQEALEKLKKEVQDGQIVLMELNLASFDSIKNFAKNVMKQYPK  135 (384)
Q Consensus        56 ~k~vlITGas~GIG~a~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~  135 (384)
                      +++||=.|++.|.-   +..++++|.+|+.++.+++-.+.+.+.+.. .+..++.+++.|..+.. .         ..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~-~~~~~i~~~~~d~~~l~-~---------~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEG-NGHQQVEYVQGDAEQMP-F---------TDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHH-TTCCSEEEEECCC-CCC-S---------CTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccc-ccccccccccccccccc-c---------cccc
Confidence            57899999988843   467888999999999987766655444433 23467888999887642 0         1247


Q ss_pred             ccEEEECCCC
Q psy2854         136 IHVLINNAGV  145 (384)
Q Consensus       136 id~lvnnAG~  145 (384)
                      .|+++.+..+
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            9999888765

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.31  E-value=3  Score=31.97  Aligned_cols=78  Identities=8%  Similarity=-0.080  Sum_probs=41.8

Q ss_pred             EEEeCC-CCchhHHHHHHHHHCC----CEEEEEecCchhHHHHHHHH-HHH-hcCCcEEEEEeecCCHHHHHHHHHHHHH
Q psy2854          59 CIITGA-NSGIGYETAKELAKLK----ATVVLGCRSMIRGQEALEKL-KKE-VQDGQIVLMELNLASFDSIKNFAKNVMK  131 (384)
Q Consensus        59 vlITGa-s~GIG~a~a~~l~~~G----~~Vi~~~r~~~~~~~~~~~l-~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~  131 (384)
                      +.|.|| +.|.+..++.-+....    .++++.+.++++.+....++ .+. .............+|..+   .      
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~---a------   74 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR---A------   74 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH---H------
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh---h------
Confidence            445555 6677777777666542    47999999876533222222 111 111111122233444421   1      


Q ss_pred             hCCCccEEEECCCCC
Q psy2854         132 QYPKIHVLINNAGVS  146 (384)
Q Consensus       132 ~~g~id~lvnnAG~~  146 (384)
                       ...-|++|+.||+.
T Consensus        75 -l~gaDvVv~ta~~~   88 (169)
T d1s6ya1          75 -LDGADFVTTQFRVG   88 (169)
T ss_dssp             -HTTCSEEEECCCTT
T ss_pred             -cCCCCEEEEccccC
Confidence             12679999999984