Diaphorina citri psyllid: psy2878


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCACNRTLNGKTL
cccccccccccEEEEEccccccccccccccEEEEEcccccccEEEEEECccccCEEcccHHHHHHHHHHHHHccccEEEEEEcccHHHHHccccccccccccccCEECcccccHHHHccccccccEEEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHcccccccccccccccccc
*KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCACNRTL*****
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MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCACNRTLNGKTL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alkyl hydroperoxide reductase subunit C Together with AhpD, DltA and Lpd constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in detoxification of isoniazid.confidentA0R1V9
Alkyl hydroperoxide reductase subunit C Together with AhpD, DltA and Lpd constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in detoxification of isoniazid.confidentQ7BHK8
Peroxiredoxin TSA1 Physiologically important antioxidant which constitutes an enzymatic defense against sulfur-containing radicals. Can provide protection against a thiol-containing oxidation system but not against an oxidation system without thiol.confidentP34760

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0030446 [CC]hyphal cell wallprobableGO:0005618, GO:0044464, GO:0005623, GO:0030312, GO:0005575, GO:0071944, GO:0009277
GO:0032843 [MF]hydroperoxide reductase activityprobableGO:0003824, GO:0016671, GO:0003674, GO:0016667, GO:0016491
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0008379 [MF]thioredoxin peroxidase activityprobableGO:0016209, GO:0016705, GO:0051920, GO:0003824, GO:0003674, GO:0016684, GO:0004601, GO:0016491
GO:0042744 [BP]hydrogen peroxide catabolic processprobableGO:0000302, GO:0044248, GO:0042743, GO:0070887, GO:0044699, GO:0051716, GO:0070301, GO:0009987, GO:0034614, GO:0072593, GO:0006950, GO:0008150, GO:0008152, GO:0042221, GO:0034599, GO:0010035, GO:0009056, GO:0006979, GO:1901700, GO:1901701, GO:0042542, GO:0050896, GO:0044237, GO:0033554, GO:0044763
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0043022 [MF]ribosome bindingprobableGO:0043021, GO:0003674, GO:0005488
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0052059 [BP]evasion or tolerance by symbiont of host-produced reactive oxygen speciesprobableGO:0052550, GO:0030682, GO:0052572, GO:0052200, GO:0075136, GO:0044419, GO:0020012, GO:0044413, GO:0051832, GO:0044415, GO:0051834, GO:0052385, GO:0052567, GO:0052564, GO:0006952, GO:0006950, GO:0008150, GO:0051805, GO:0051701, GO:0051707, GO:0051704, GO:0052173, GO:0009607, GO:0050896, GO:0044403, GO:0051807
GO:0006974 [BP]response to DNA damage stimulusprobableGO:0051716, GO:0050896, GO:0009987, GO:0006950, GO:0044763, GO:0033554, GO:0008150, GO:0044699
GO:0048518 [BP]positive regulation of biological processprobableGO:0008150, GO:0065007, GO:0050789
GO:0043066 [BP]negative regulation of apoptotic processprobableGO:0043069, GO:0050794, GO:0008150, GO:0043067, GO:0065007, GO:0060548, GO:0048519, GO:0010941, GO:0042981, GO:0050789, GO:0048523
GO:0044092 [BP]negative regulation of molecular functionprobableGO:0008150, GO:0065009, GO:0065007
GO:0010033 [BP]response to organic substanceprobableGO:0042221, GO:0050896, GO:0008150
GO:0030447 [BP]filamentous growthprobableGO:0008150, GO:0040007, GO:0044699
GO:0048731 [BP]system developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0007275, GO:0044699
GO:0030985 [MF]high molecular weight kininogen bindingprobableGO:0030984, GO:0003674, GO:0005488, GO:0005515
GO:0044238 [BP]primary metabolic processprobableGO:0008150, GO:0008152
GO:0005782 [CC]peroxisomal matrixprobableGO:0005737, GO:0005575, GO:0043231, GO:0042579, GO:0044464, GO:0043233, GO:0005777, GO:0043229, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0005623, GO:0031907, GO:0044424, GO:0044439, GO:0044438, GO:0043227, GO:0043226, GO:0044422
GO:0051090 [BP]regulation of sequence-specific DNA binding transcription factor activityprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0065009, GO:0010468
GO:0004602 [MF]glutathione peroxidase activityprobableGO:0016209, GO:0003824, GO:0003674, GO:0016684, GO:0004601, GO:0016491
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0008785 [MF]alkyl hydroperoxide reductase activityprobableGO:0003824, GO:0003674, GO:0016651, GO:0016667, GO:0016668, GO:0016491
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0071704 [BP]organic substance metabolic processprobableGO:0008150, GO:0008152
GO:0051260 [BP]protein homooligomerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0009970 [BP]cellular response to sulfate starvationprobableGO:0009267, GO:0051716, GO:0031669, GO:0033554, GO:0009605, GO:0050896, GO:0009987, GO:0031668, GO:0031667, GO:0008150, GO:0006950, GO:0071496, GO:0044763, GO:0044699, GO:0042594, GO:0007154, GO:0009991
GO:0019430 [BP]removal of superoxide radicalsprobableGO:0000303, GO:0000302, GO:0006801, GO:0070887, GO:0044699, GO:0051716, GO:0071451, GO:0009987, GO:0034614, GO:0072593, GO:0006950, GO:0044763, GO:0008152, GO:0042221, GO:0034599, GO:0010035, GO:0006979, GO:1901700, GO:1901701, GO:0050896, GO:0044237, GO:0033554, GO:0008150
GO:0008340 [BP]determination of adult lifespanprobableGO:0032502, GO:0032501, GO:0007568, GO:0044707, GO:0044767, GO:0010259, GO:0008150, GO:0007275, GO:0044699
GO:0005844 [CC]polysomeprobableGO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0030529
GO:0005719 [CC]nuclear euchromatinprobableGO:0031974, GO:0043229, GO:0043228, GO:0000785, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0044454, GO:0005694, GO:0000790, GO:0000791, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044427, GO:0044422
GO:0045454 [BP]cell redox homeostasisprobableGO:0019725, GO:0009987, GO:0050794, GO:0042592, GO:0044763, GO:0008150, GO:0065007, GO:0065008, GO:0050789, GO:0044699
GO:0005759 [CC]mitochondrial matrixprobableGO:0005737, GO:0005575, GO:0043231, GO:0043233, GO:0031974, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422
GO:0051409 [BP]response to nitrosative stressprobableGO:0006950, GO:0008150, GO:0050896
GO:0052060 [BP]evasion or tolerance by symbiont of host-produced nitric oxideprobableGO:0052551, GO:0030682, GO:0052572, GO:0052200, GO:0075136, GO:0044419, GO:0020012, GO:0044413, GO:0051832, GO:0044415, GO:0051834, GO:0052564, GO:0052565, GO:0006952, GO:0052376, GO:0006950, GO:0008150, GO:0051805, GO:0051701, GO:0051707, GO:0051704, GO:0052173, GO:0009607, GO:0050896, GO:0044403, GO:0051807
GO:0005576 [CC]extracellular regionprobableGO:0005575

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2BMX, chain A
Confidence level:very confident
Coverage over the Query: 2-166
View the alignment between query and template
View the model in PyMOL