Psyllid ID: psy2929

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPFES
Secondary Structure (PSIPRED)
ccEEEccccHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccEEEEEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEHHHHHcHcHHHHHHHHHHHHHHcccccEEEEEEEEEccccEEEEEEEccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEEEEEEccccEEEEcccEEEEccccccccc
Coil and Loop (DISEMBL)
MKEVQNALDKENRKYFANEVDnlkslshpniVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMsvnqhkpryIAWKVGSILAGGKLYFIENrqvrsgnvngpfes
Flexible Loop (DISEMBL)
MKEVQNALDKENRKYFANEvdnlkslshpnIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIenrqvrsgnvngpfes
Low Complexity Region (SEG)
MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPFES
Disordered region (IsUnstruct)
**************YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENR*************
Disordered Region (DISOPRED)
MKEVQ**********FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQ************
Disordered Region (DISEMBL)
********DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPFES
Disordered Region (DISPRO)
MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPF**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPFES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
B4NSS9	743	Serine/threonine-protein	N/A	N/A	0.717	0.126	0.357	6e-10
B4IMC3	744	Serine/threonine-protein	N/A	N/A	0.717	0.126	0.357	6e-10
Q6PGN3	756	Serine/threonine-protein	yes	N/A	0.580	0.100	0.394	7e-10
B3NKK1	745	Serine/threonine-protein	N/A	N/A	0.717	0.126	0.357	7e-10
Q7PLI7	748	Serine/threonine-protein	no	N/A	0.717	0.125	0.357	8e-10
Q8BHI9	436	Serine/threonine-protein	no	N/A	0.625	0.188	0.365	1e-09
Q8IY84	436	Serine/threonine-protein	yes	N/A	0.625	0.188	0.353	1e-09
B4IT27	750	Serine/threonine-protein	N/A	N/A	0.717	0.125	0.347	2e-09
B5DK35	755	Serine/threonine-protein	no	N/A	0.709	0.123	0.333	3e-09
B4GXC2	755	Serine/threonine-protein	N/A	N/A	0.709	0.123	0.333	3e-09

>sp|B4NSS9|DCLK_DROSI Serine/threonine-protein kinase GD17699 OS=Drosophila simulans GN=GD17699 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct: 510 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSES 569

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV 103
             + ++  +  A+ YLHS+  V++  KP  +  K+
Sbjct: 570 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKL 604

Drosophila simulans (taxid: 7240)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|B4IMC3|DCLK_DROSE Serine/threonine-protein kinase GM11705 OS=Drosophila sechellia GN=GM11705 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct: 510 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSES 569

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV 103
             + ++  +  A+ YLHS+  V++  KP  +  K+
Sbjct: 570 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKL 604

Drosophila sechellia (taxid: 7238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6PGN3|DCLK2_MOUSE Serine/threonine-protein kinase DCLK2 OS=Mus musculus GN=Dclk2 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/76 (39%), Positives = 47/76 (61%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NEV  L+ + HPNI+ L E +    ++++ +E V+GGDL   I +  K +E     +VY 
Sbjct: 438 NEVSILRRVKHPNIIMLVEEMETATDLFLVMELVKGGDLFDAITSSTKYTERDGSAMVYN 497

Query: 78  IAMALQYLHSLMSVNQ 93
           +A AL+YLHSL  V++
Sbjct: 498 LANALRYLHSLSIVHR 513

Protein kinase with a significantly reduced Ca(2+)+/CAM affinity and dependence compared to other members of the CaMK family. May play a role in the down-regulation of CRE-dependent gene activation probably by phosphorylation of the CREB coactivator CRTC2/TORC2 and the resulting retention of TORC2 in the cytoplasm.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B3NKK1|DCLK_DROER Serine/threonine-protein kinase GG21441 OS=Drosophila erecta GN=GG21441 PE=3 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct: 516 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSES 575

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV 103
             + ++  +  A+ YLHS+  V++  KP  +  K+
Sbjct: 576 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKL 610

Drosophila erecta (taxid: 7220)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7PLI7|DCLK_DROME Serine/threonine-protein kinase CG17528 OS=Drosophila melanogaster GN=CG17528 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct: 514 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSEN 573

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV 103
             + ++  +  A+ YLHS+  V++  KP  +  K+
Sbjct: 574 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKL 608

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BHI9|NIM1_MOUSE Serine/threonine-protein kinase NIM1 OS=Mus musculus GN=Nim1 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/82 (36%), Positives = 49/82 (59%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           +  LD++ ++  + E+ +++ L HPNIV LYE V     +++ +EY  GG+L  KI    
Sbjct: 107 KTKLDQKTQRLLSREISSMEKLHHPNIVRLYEVVETLSKLHLVMEYAGGGELFGKISTEG 166

Query: 65  KLSEETCKCIVYQIAMALQYLH 86
           KLSE   K I  QI  A++++H
Sbjct: 167 KLSEPESKLIFSQILSAVKHMH 188

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8IY84|NIM1_HUMAN Serine/threonine-protein kinase NIM1 OS=Homo sapiens GN=NIM1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           +  LD++ ++  + E+ +++ L HPNI+ LYE V     +++ +EY  GG+L  KI    
Sbjct: 107 KTKLDQKTQRLLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEYAGGGELFGKISTEG 166

Query: 65  KLSEETCKCIVYQIAMALQYLH 86
           KLSE   K I  QI  A++++H
Sbjct: 167 KLSEPESKLIFSQIVSAVKHMH 188

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B4IT27|DCLK_DROYA Serine/threonine-protein kinase GE16371 OS=Drosophila yakuba GN=GE16371 PE=3 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + +E 
Sbjct: 516 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFAES 575

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV 103
             + ++  +  A+ YLHS+  V++  KP  +  K+
Sbjct: 576 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKL 610

Drosophila yakuba (taxid: 7245)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B5DK35|DCLK_DROPS Serine/threonine-protein kinase GA29083 OS=Drosophila pseudoobscura pseudoobscura GN=GA29083 PE=3 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 49/93 (52%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K +  +  K    Y   EV  +K L HP+I++L   V    N+Y+ LEYV GGDL   I
Sbjct: 512 LKIIDKSKCKGKEHYIDAEVRVMKKLHHPHIISLIMDVDQDTNMYLVLEYVSGGDLFDAI 571

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
               + SE   + ++  +  A+ YLHS+  V++
Sbjct: 572 TQVTRFSESQSRIMIRHLGSAMSYLHSMGIVHR 604

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B4GXC2|DCLK_DROPE Serine/threonine-protein kinase GL21140 OS=Drosophila persimilis GN=GL21140 PE=3 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 49/93 (52%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K +  +  K    Y   EV  +K L HP+I++L   V    N+Y+ LEYV GGDL   I
Sbjct: 512 LKIIDKSKCKGKEHYIDAEVRVMKKLHHPHIISLIMDVDQDTNMYLVLEYVSGGDLFDAI 571

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
               + SE   + ++  +  A+ YLHS+  V++
Sbjct: 572 TQVTRFSESQSRIMIRHLGSAMSYLHSMGIVHR 604

Drosophila persimilis (taxid: 7234)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
291238138	444	PREDICTED: doublecortin-like kinase 1-li	0.709	0.209	0.419	3e-11
312106486	147	CAMK/CAMKL/NIM1 protein kinase [Loa loa]	0.633	0.564	0.409	2e-10
328703463	481	PREDICTED: serine/threonine-protein kina	0.648	0.176	0.432	4e-10
390335161	1080	PREDICTED: uncharacterized protein LOC57	0.709	0.086	0.387	7e-10
432889253	435	PREDICTED: serine/threonine-protein kina	0.656	0.197	0.360	8e-10
189524928	442	PREDICTED: serine/threonine-protein kina	0.618	0.183	0.419	8e-10
348505418	628	PREDICTED: serine/threonine-protein kina	0.618	0.128	0.382	6e-09
348522127	417	PREDICTED: serine/threonine-protein kina	0.603	0.189	0.392	8e-09
395838310	268	PREDICTED: MAP/microtubule affinity-regu	0.541	0.264	0.394	9e-09
395824763	484	PREDICTED: MAP/microtubule affinity-regu	0.725	0.196	0.308	9e-09

>gi|291238138|ref|XP_002738988.1| PREDICTED: doublecortin-like kinase 1-like, partial [Saccoglossus kowalevskii]

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/93 (41%), Positives = 55/93 (59%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           MK +  +  K       NEV  +K+++HPNIV LYE    +D+IY+ +EYV+GGDL   I
Sbjct: 344 MKIIDKSKLKGKEHMLENEVGIMKAVNHPNIVRLYEEYETQDHIYLLMEYVKGGDLFDAI 403

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
              VK +E     +V  +A AL YLHSL  V++
Sbjct: 404 TESVKFTEHDASMMVKDLATALGYLHSLNIVHR 436

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|312106486|ref|XP_003150725.1| CAMK/CAMKL/NIM1 protein kinase [Loa loa] gi|307754110|gb|EFO13344.1| CAMK/CAMKL/NIM1 protein kinase, partial [Loa loa]

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 51/83 (61%)

Query: 5  QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
          ++ ++K+ +   ANE+  ++ L HPNI+ LYE+V     +Y+ +EY  GGDL S I    
Sbjct: 6  KSMMNKKAQNLLANEIKTMEQLHHPNIIRLYETVETTTRVYLIMEYACGGDLCSHIHHRG 65

Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
          KLSE  CK +  QI  A+ Y+HS
Sbjct: 66 KLSENDCKPMFAQIISAISYMHS 88

Source: Loa loa

Species: Loa loa

Genus: Loa

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|328703463|ref|XP_001951526.2| PREDICTED: serine/threonine-protein kinase Chk2-like [Acyrthosiphon pisum]

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 12/97 (12%)

Query: 3   EVQNALDKENRKYFA------------NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEY 50
           EV+ A +K+  K FA             E D L SLSHPNIV +   +   D IY+ LEY
Sbjct: 184 EVRLAFEKKTTKCFALKKVNRESCIVLREPDILSSLSHPNIVNMENFIDTTDAIYITLEY 243

Query: 51  VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           + GG LK  IE   +L E   K I+YQ+A A+QYLH+
Sbjct: 244 MPGGTLKQLIENTKRLKESESKIILYQVARAVQYLHN 280

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390335161|ref|XP_783298.3| PREDICTED: uncharacterized protein LOC578013 [Strongylocentrotus purpuratus]

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++ A  K       NE+  +K + HPNIV LYE    + +IY+ +EYV GGDL   I
Sbjct: 812 LKVIEKAKVKNKEHMVENEIAIMKHVRHPNIVRLYEEYETRGHIYLVMEYVTGGDLFDAI 871

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
              VK +E     +V  +A AL+YLH L  V++
Sbjct: 872 TESVKFTERDAALMVTDLAKALKYLHDLNVVHR 904

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|432889253|ref|XP_004075186.1| PREDICTED: serine/threonine-protein kinase NIM1-like [Oryzias latipes]

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 55/86 (63%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           LD + ++  + E++++++L HPNIV LYE V     +Y+ LEY  GGDL ++I +  KL 
Sbjct: 104 LDAQAQRLLSREINSMEALQHPNIVRLYEVVETPSRLYLVLEYAGGGDLHNRICSEGKLC 163

Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQ 93
           + T K    Q+  A++Y+H+L  +++
Sbjct: 164 DNTSKVTFAQVLSAIKYMHNLSIIHR 189

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|189524928|ref|XP_687538.3| PREDICTED: serine/threonine-protein kinase NIM1-like [Danio rerio]

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 53/81 (65%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           LDK+++  FA+E+  ++ LSHPNIV LYE +    ++Y+ +EY  GGDL S+I    +LS
Sbjct: 115 LDKKSQNLFASEIMCMEKLSHPNIVRLYEVLETGKHVYLAMEYGSGGDLFSRITTRGRLS 174

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           +   K I  QI  A++Y+H +
Sbjct: 175 DLESKLIFAQIVSAIKYMHEI 195

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348505418|ref|XP_003440258.1| PREDICTED: serine/threonine-protein kinase NIM1-like [Oreochromis niloticus]

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 50/81 (61%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           LD E ++  + E+ ++++L HPN++ LYE V     +++ LEY  GGDL S+I    KLS
Sbjct: 299 LDAEAQRLLSREISSMEALHHPNVIRLYEVVETPRRLHLVLEYAGGGDLHSRICNEGKLS 358

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           +   K    QI  A++Y+HS+
Sbjct: 359 DNASKITFAQILSAIKYMHSI 379

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348522127|ref|XP_003448577.1| PREDICTED: serine/threonine-protein kinase NIM1-like [Oreochromis niloticus]

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           LDK ++  FA+E+  ++ L+HPNIV LYE V     +Y+ +EY  GG+L S+I    +LS
Sbjct: 89  LDKHSQGLFASEISCMEKLAHPNIVRLYEVVETFKRLYLVMEYASGGELFSRISTRGRLS 148

Query: 68  EETCKCIVYQIAMALQYLH 86
           +   K +  Q+  A++Y+H
Sbjct: 149 DLESKLVFSQVLSAVRYMH 167

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395838310|ref|XP_003792059.1| PREDICTED: MAP/microtubule affinity-regulating kinase 3-like [Otolemur garnettii]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 45/71 (63%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
            + E D +K L HPNIV L+E++  K+N+Y+ +E+  GGDL  +I A  ++ E   + I 
Sbjct: 53  LSAEPDIMKRLHHPNIVQLFEAIEGKENMYLIMEHAGGGDLLERINASGQMEEGEARGIF 112

Query: 76  YQIAMALQYLH 86
            Q+  A++YLH
Sbjct: 113 LQLLKAMEYLH 123

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395824763|ref|XP_003785625.1| PREDICTED: MAP/microtubule affinity-regulating kinase 3-like [Otolemur garnettii]

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 12/107 (11%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E D +K L HPNIV L+E++  K+N+Y+ +E+  GGDL ++I+A  +L E   + I  Q+
Sbjct: 63  EPDIMKRLHHPNIVQLFEAIEGKENMYLIMEHAGGGDLFARIKAAGQLEEGEARGIFLQL 122

Query: 79  AMALQYLH------------SLMSVNQHKPRYIAWKVGSILAGGKLY 113
             A++YLH            +++  +Q+  +   + + +  +GGK++
Sbjct: 123 LKAMEYLHQKGIAHRDLKLENILFDSQNNVKLADFGMAASFSGGKMF 169

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
UNIPROTKB|E1C6B4	436	NIM1 "Uncharacterized protein"	0.603	0.181	0.367	4e-10
UNIPROTKB|D4A9H8	436	RGD1308116 "Protein RGD1308116	0.603	0.181	0.379	8.4e-10
ZFIN|ZDB-GENE-091204-283	433	si:ch211-22d5.2 "si:ch211-22d5	0.603	0.182	0.341	1.1e-09
UNIPROTKB|E2RHT3	436	NIM1 "Uncharacterized protein"	0.603	0.181	0.367	1.1e-09
UNIPROTKB|Q8IY84	436	NIM1 "Serine/threonine-protein	0.603	0.181	0.367	1.1e-09
MGI|MGI:2442399	436	Nim1 "serine/threonine-protein	0.603	0.181	0.379	1.1e-09
UNIPROTKB|F1RSR2	287	F1RSR2 "Uncharacterized protei	0.732	0.334	0.340	1.1e-09
UNIPROTKB|F1NFZ1	319	DCLK3 "Uncharacterized protein	0.732	0.300	0.381	1.2e-09
UNIPROTKB|B3NKK1	745	GG21441 "Serine/threonine-prot	0.748	0.131	0.352	2e-09
FB|FBgn0261387	748	CG17528 [Drosophila melanogast	0.748	0.131	0.352	2e-09

UNIPROTKB|E1C6B4 NIM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 152 (58.6 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 29/79 (36%), Positives = 49/79 (62%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD++ ++  + E+ +++ L HPNI+ LYE V     +++ +EY  GG+L +KI    KL 
Sbjct:   110 LDQKTQRLLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEYAGGGELFTKITTEGKLI 169

Query:    68 EETCKCIVYQIAMALQYLH 86
             E  CK I  QI  A++++H
Sbjct:   170 ETDCKIIFSQIVSAVKHMH 188

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|D4A9H8 RGD1308116 "Protein RGD1308116" [Rattus norvegicus (taxid:10116)]

 Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD++ ++  + E+ +++ L HPNIV LYE V     +++ +EY  GG+L  KI    KLS
Sbjct:   110 LDQKTQRLLSREISSMEKLHHPNIVRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLS 169

Query:    68 EETCKCIVYQIAMALQYLH 86
             E   K I  QI  A++++H
Sbjct:   170 EPESKLIFSQIVSAVKHMH 188

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-091204-283 si:ch211-22d5.2 "si:ch211-22d5.2" [Danio rerio (taxid:7955)]

 Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 27/79 (34%), Positives = 49/79 (62%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD + ++    E+ N++SL HPN++ L+E +     +Y+ LE+  GGDL ++I +  KL+
Sbjct:   105 LDVQTQRMLTREISNMESLYHPNLLQLFEVLETPSRLYLILEFAGGGDLHTRISSGGKLT 164

Query:    68 EETCKCIVYQIAMALQYLH 86
             +   K +  QI  A++Y+H
Sbjct:   165 DLESKIVFAQILSAVKYMH 183

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2RHT3 NIM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD++ ++  + E+ +++ L HPNI+ LYE V     +++ +EY  GG+L  KI    KLS
Sbjct:   110 LDQKTQRLLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLS 169

Query:    68 EETCKCIVYQIAMALQYLH 86
             E   K I  QI  A++++H
Sbjct:   170 EPESKLIFSQIVSAVKHMH 188

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|Q8IY84 NIM1 "Serine/threonine-protein kinase NIM1" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD++ ++  + E+ +++ L HPNI+ LYE V     +++ +EY  GG+L  KI    KLS
Sbjct:   110 LDQKTQRLLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLS 169

Query:    68 EETCKCIVYQIAMALQYLH 86
             E   K I  QI  A++++H
Sbjct:   170 EPESKLIFSQIVSAVKHMH 188

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

MGI|MGI:2442399 Nim1 "serine/threonine-protein kinase NIM1" [Mus musculus (taxid:10090)]

 Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query:     8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
             LD++ ++  + E+ +++ L HPNIV LYE V     +++ +EY  GG+L  KI    KLS
Sbjct:   110 LDQKTQRLLSREISSMEKLHHPNIVRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLS 169

Query:    68 EETCKCIVYQIAMALQYLH 86
             E   K I  QI  A++++H
Sbjct:   170 EPESKLIFSQILSAVKHMH 188

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1RSR2 F1RSR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query:     1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
             +K ++ +  +       NEV  L+ + HPNIV L E +     +Y+ +E V+GGDL   I
Sbjct:   112 LKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAI 171

Query:    61 EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KP 96
              +  K +E     ++Y +A A++YLHSL  V++  KP
Sbjct:   172 TSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKP 208

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1NFZ1 DCLK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 37/97 (38%), Positives = 52/97 (53%)

Query:     1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
             MK V  +  K       +E+  ++SLSHPNIV+L E    +  IY+ LEYV GGDL   I
Sbjct:    54 MKIVDKSKLKGKEDMMESEILIIRSLSHPNIVSLIEVYETEAEIYLILEYVPGGDLFDAI 113

Query:    61 EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KP 96
                VK +E     ++  +  AL Y+HS   V++  KP
Sbjct:   114 IESVKFTEHDAAVMITDLCEALVYIHSKNIVHRDLKP 150

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|B3NKK1 GG21441 "Serine/threonine-protein kinase GG21441" [Drosophila erecta (taxid:7220)]

 Score = 149 (57.5 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 36/102 (35%), Positives = 56/102 (54%)

Query:    10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
             K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct:   516 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSES 575

Query:    70 TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV---GSIL 107
               + ++  +  A+ YLHS+  V++  KP  +  K+   G++L
Sbjct:   576 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKLDEHGNVL 617

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

FB|FBgn0261387 CG17528 [Drosophila melanogaster (taxid:7227)]

 Score = 149 (57.5 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 36/102 (35%), Positives = 56/102 (54%)

Query:    10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
             K    Y   EV  +K L+HP+I++L  SV    N+Y+ LEYV GGDL   I    + SE 
Sbjct:   514 KGKEHYIDAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSEN 573

Query:    70 TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKV---GSIL 107
               + ++  +  A+ YLHS+  V++  KP  +  K+   G++L
Sbjct:   574 QSRIMIRHLGAAMTYLHSMGIVHRDIKPENLLVKLDEHGNVL 615

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0006468 "protein phosphorylation" evidence=ISS;NAS

GO:0008017 "microtubule binding" evidence=ISS

GO:0007017 "microtubule-based process" evidence=ISS

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	131
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-27
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-24
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-19
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-15
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-14
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-14
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-14
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-13
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-13
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-13
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-12
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-11
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-11
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-11
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-10
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-09
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	8e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-08
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-08
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	6e-08
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	7e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	8e-08
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-07
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-07
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-07
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	6e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-07
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-06
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	6e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-05
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	7e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	7e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	8e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.001
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.001
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.002
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.003
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.003
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.003
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.003
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.003
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.004
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.004
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  101 bits (253), Expect = 2e-27
 Identities = 33/88 (37%), Positives = 53/88 (60%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++    K++R+    E+  LK L HPNIV LY+    +D +Y+ +EY +GGDL   +
Sbjct: 29  IKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL 88

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSL 88
           +   +LSE+  +  + QI  AL+YLHS 
Sbjct: 89  KKRGRLSEDEARFYLRQILSALEYLHSK 116

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 92.3 bits (230), Expect = 7e-24
 Identities = 31/79 (39%), Positives = 45/79 (56%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
             +  +    E+  L+ LSHPNIV L ++   KD++Y+ +EY +GGDL   +     LSE
Sbjct: 38  KSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSE 97

Query: 69  ETCKCIVYQIAMALQYLHS 87
           +  K I  QI   L+YLHS
Sbjct: 98  DEAKKIALQILRGLEYLHS 116

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++        +    E++ LK L+HPNIV LY     ++++Y+ +EY +GG LK  +
Sbjct: 23  IKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLL 82

Query: 61  EAC-VKLSEETCKCIVYQIAMALQYLHS 87
           +    KLSE+    I+ QI   L+YLHS
Sbjct: 83  KENEGKLSEDEILRILLQILEGLEYLHS 110

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 80.6 bits (200), Expect = 2e-19
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +KE+  + + ++ R+   NEV  LK L+HPNI+  YES   K  + + +EY  GGDL  K
Sbjct: 30  LKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQK 89

Query: 60  IE----ACVKLSEETCKCIVYQIAMALQYLHS 87
           I+          EE       Q+ +AL+YLHS
Sbjct: 90  IKKQKKEGKPFPEEQILDWFVQLCLALKYLHS 121

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 70.6 bits (174), Expect = 9e-16
 Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)

Query: 1   MKEV--QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           MK +  +  + ++  ++   E + L  ++HP IV L+ +   ++ +Y+ LEY  GG+L S
Sbjct: 23  MKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFS 82

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHSL 88
            +    + SEE  +    +I +AL+YLHSL
Sbjct: 83  HLSKEGRFSEERARFYAAEIVLALEYLHSL 112

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 70.4 bits (173), Expect = 1e-15
 Identities = 29/81 (35%), Positives = 41/81 (50%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK 65
             + +E  K    E+D LK+L HPNIV    S+   D++Y+ LEY + G L+  I+    
Sbjct: 36  EKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGP 95

Query: 66  LSEETCKCIVYQIAMALQYLH 86
             E      VYQ+   L YLH
Sbjct: 96  FPESLVAVYVYQVLQGLAYLH 116

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 1   MKEVQNALDKENRKY---FANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGD 55
           +K V+  L  ++ +       E+  L SL HPNIV  Y S     K+ + +FLEYV GG 
Sbjct: 30  VKSVE--LSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGS 87

Query: 56  LKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           L S ++   KL E   +    QI   L YLHS
Sbjct: 88  LSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 17/102 (16%)

Query: 3   EVQNALDKENRKYFA----------------NEVDNLKSLSHPNIVTLYESVLWKDNIYM 46
           EV  A  K   K  A                NE+  LK   HPNIV  Y S L KD +++
Sbjct: 15  EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74

Query: 47  FLEYVQGGDLKSKIEACVK-LSEETCKCIVYQIAMALQYLHS 87
            +E+  GG LK  +++  + L+E     +  ++   L+YLHS
Sbjct: 75  VMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K ++    +E R+ F  E   +K LSHPNIV L       + +Y+  EY+ GGDL   + 
Sbjct: 34  KTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLR 93

Query: 62  AC-VKLSEETCKCIVYQIAMALQYLHS 87
               KL+ +    +  QIA  ++YL S
Sbjct: 94  KHGEKLTLKDLLQMALQIAKGMEYLES 120

Length = 258

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 23/106 (21%)

Query: 4   VQNALDKENRKYFA-------------------NEVDNLKSLSHPNIVTLYESVLWKD-- 42
           V     K + KY+A                   NE   L+S+ HP +V LY S  ++D  
Sbjct: 17  VMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGS--FQDDS 74

Query: 43  NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           N+Y+ +EYV GG+L S +    +  E   +    Q+ +AL+YLHSL
Sbjct: 75  NLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 27/87 (31%), Positives = 42/87 (48%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K++    D+E RK    E+  L+S   P +V  Y +   +  I + LEY+ GG L   +
Sbjct: 31  LKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLL 90

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
           +   K+ E     I  QI   L YLH+
Sbjct: 91  KKVGKIPEPVLAYIARQILKGLDYLHT 117

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 66.0 bits (162), Expect = 5e-14
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--K 59
           K ++    ++  + F  E   ++ L HPNIV L      ++ + + +EY+ GGDL    +
Sbjct: 34  KTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLR 93

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
                +LS         QIA  ++YL S 
Sbjct: 94  KNRPKELSLSDLLSFALQIARGMEYLESK 122

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 65.6 bits (161), Expect = 8e-14
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L HPNIV L + +  +  +Y+  EY    DLK  ++     LS    K I+YQ
Sbjct: 48  EISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQ 106

Query: 78  IAMALQYLHS 87
           +   L Y HS
Sbjct: 107 LLRGLAYCHS 116

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 65.3 bits (160), Expect = 9e-14
 Identities = 28/71 (39%), Positives = 40/71 (56%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E D L     P +V LY S   K N+Y+ +EY+ GGDL S +E    L E+  +  + +
Sbjct: 42  TERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAE 101

Query: 78  IAMALQYLHSL 88
           I +AL+YLHS 
Sbjct: 102 IVLALEYLHSN 112

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K ++    ++  + F  E   ++ L HPN+V L      ++ +Y+ +EY++GGDL S + 
Sbjct: 34  KTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLR 93

Query: 62  AC-VKLSEETCKCIVYQIAMALQYLHS 87
               KLS         QIA  ++YL S
Sbjct: 94  KNRPKLSLSDLLSFALQIARGMEYLES 120

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKL 66
           L K+N++   NE+  +K   HPNIV  Y+S L  D +++ +EY+ GG L   I    V++
Sbjct: 54  LRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRM 113

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +E     +  ++   L+YLHS
Sbjct: 114 NEPQIAYVCREVLQGLEYLHS 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.9 bits (154), Expect = 7e-13
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++    +E RK F  E   +K L HPN+V L      ++ +Y+ LEY++GGDL   +
Sbjct: 28  VKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Query: 61  EACVK---------LSEETCKCIVYQIAMALQYLHS 87
                         LS +       QIA  ++YL S
Sbjct: 88  RKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS 123

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 61.7 bits (150), Expect = 2e-12
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 1   MKEV----QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
           +KEV         +E  K    E+  L  L HPNIV    +   +DN+Y+FLE V GG L
Sbjct: 30  VKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSL 89

Query: 57  KSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
              ++      E   +    QI + L+YLH 
Sbjct: 90  AKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 9/87 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
              V+N L         NE   L+ L+HP +V L+ S   ++N+Y+ ++ + GGDL+  +
Sbjct: 41  KGSVRNVL---------NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHL 91

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
              VK SEE  K  + +I +AL+YLHS
Sbjct: 92  SQKVKFSEEQVKFWICEIVLALEYLHS 118

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 60.6 bits (148), Expect = 5e-12
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIE-ACVKLSEETCKCIV 75
           E+  L+ L HPNIV L E V  K   +IYM  EY+   DL   ++   VK +E   KC +
Sbjct: 48  EIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYM 106

Query: 76  YQIAMALQYLHS 87
            Q+   LQYLHS
Sbjct: 107 KQLLEGLQYLHS 118

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 10  KENR-KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           KE + KY   E + L  L+ HP I+ LY +   ++N+Y  LEY   G+L   I     L 
Sbjct: 41  KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLD 100

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E+  +    +I +AL+YLHS 
Sbjct: 101 EKCTRFYAAEILLALEYLHSK 121

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 14  KYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACVKLSEETC 71
           ++  +E + L+  +HP IV LY +  +KD   IYM +EY  GG+L + +       E T 
Sbjct: 38  EHIFSEKEILEECNHPFIVKLYRT--FKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTA 95

Query: 72  KCIVYQIAMALQYLHSL 88
           +  +  + +A +YLH+ 
Sbjct: 96  RFYIACVVLAFEYLHNR 112

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK 65
           +   ++ R+   NEV  ++   HPNIV +Y S L  D +++ +E+++GG L + I    +
Sbjct: 53  DLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL-TDIVTHTR 111

Query: 66  LSEETCKCIVYQIAMALQYLHS 87
           ++EE    +   +  AL +LH+
Sbjct: 112 MNEEQIATVCLAVLKALSFLHA 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 57.8 bits (140), Expect = 5e-11
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LS 67
            +E  + F  E+D L    HPNIV LYE+  +++ +++ +E+  GG L S +    + L+
Sbjct: 42  SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLT 101

Query: 68  EETCKCIVYQIAMALQYLHS 87
           E   + +  Q+  AL +LHS
Sbjct: 102 EPQIRYVCRQMLEALNFLHS 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 58.2 bits (139), Expect = 6e-11
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 9   DKENRKYFANEVDNLKSLSHP-NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---V 64
             +  + F  E+  L SL+HP NIV LY+    + ++Y+ +EYV GG L+  ++      
Sbjct: 37  KSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKG 96

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            LSE     I+ QI  AL+YLHS
Sbjct: 97  PLSESEALFILAQILSALEYLHS 119

Length = 384

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 57.3 bits (139), Expect = 7e-11
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 1   MKEVQNALDKENRKYF---ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLK 57
           +KE+   +   + K     A+E+  L+ L HPN+V  Y   + ++ +Y+F+EY  GG L+
Sbjct: 30  VKEI--RIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLE 87

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
             +E    L E   +    Q+   L YLHS   V++  KP  I
Sbjct: 88  ELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANI 130

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%)

Query: 13  RKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACVK----L 66
           ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL   I+ C K    +
Sbjct: 43  KQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI 102

Query: 67  SEETCKCIVYQIAMALQYLH 86
            EE    I+ Q+ +AL   H
Sbjct: 103 EEEFIWRILTQLLLALYECH 122

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
           NE   LK +SHP I+ L+ +    D   +YM +EYV GG+L S +    + S  T     
Sbjct: 50  NEKRVLKEVSHPFIIRLFWT--EHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYA 107

Query: 76  YQIAMALQYLHSL 88
            +I  AL+YLHS 
Sbjct: 108 SEIVCALEYLHSK 120

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 5e-10
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LS 67
           D++ +K    EV  L+ L H NIV L E+   K  +Y+  EYV    L   +EA    L 
Sbjct: 40  DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLP 98

Query: 68  EETCKCIVYQIAMALQYLHS 87
            +  +  ++Q+  A+ Y HS
Sbjct: 99  PDAVRSYIWQLLQAIAYCHS 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 18  NEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIV 75
            EV +L+ L  HPNIV L E     D +Y   EY++G   +  K       SE   + I+
Sbjct: 46  REVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSII 105

Query: 76  YQIAMALQYLHS 87
           YQI   L ++H 
Sbjct: 106 YQILQGLAHIHK 117

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIV 75
           E++ L  L HPNIVT+ E V+    D IYM +EYV+  DLKS +E   +   +   KC++
Sbjct: 54  EINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLM 112

Query: 76  YQIAMALQYLHS 87
            Q+   + +LH 
Sbjct: 113 LQLLSGVAHLHD 124

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y+S L  + +++ +E++QGG L + I +  +L+EE
Sbjct: 59  QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL-TDIVSQTRLNEE 117

Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL YLHS
Sbjct: 118 QIATVCESVLQALCYLHS 135

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 7e-09
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 1   MKEVQ-NALDKENRKY---FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
           +K+V  +    E +K       E+  LK+L H  IV  Y  +   + + +F+EY+ GG +
Sbjct: 32  VKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSV 91

Query: 57  KSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
           K +++A   L+E   +    QI   ++YLHS M V++
Sbjct: 92  KDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHR 128

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 51.7 bits (124), Expect = 8e-09
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           MK+VQ         + A E   L  LSHP IV +  S   ++ +Y  LE+V GG+L + +
Sbjct: 59  MKQVQ---------HVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHL 109

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSL 88
               +   +  K    ++ +A +YLHS 
Sbjct: 110 RKAGRFPNDVAKFYHAELVLAFEYLHSK 137

Length = 329

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI--EACVKLSEETCKCIV 75
            EV  L  + HPNIVT + S      +++ +EY  GGDL  +I  +  V  SE+      
Sbjct: 48  KEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWF 107

Query: 76  YQIAMALQYLH 86
            QI++ L+++H
Sbjct: 108 VQISLGLKHIH 118

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)

Query: 1   MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           MK ++ A L   +R     E D L  ++HP IV L+ +   +  +Y+ L++++GGDL ++
Sbjct: 29  MKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR 88

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +   V  +EE  K  + ++A+AL +LHSL
Sbjct: 89  LSKEVMFTEEDVKFYLAELALALDHLHSL 117

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 26/68 (38%), Positives = 38/68 (55%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E D L     P IV LY S+   +N+Y+ +EY+ GGD+KS +       EE     + ++
Sbjct: 54  ERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEV 113

Query: 79  AMALQYLH 86
           A+AL YLH
Sbjct: 114 ALALDYLH 121

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 2   KEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           KEV    L ++ R+   NE+  L  L HPNI+  Y   +  + + + +EY  GG L  KI
Sbjct: 31  KEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKI 90

Query: 61  EACVK--LSEETCKCIVYQIAMALQYLHS 87
                    EE     ++QI  A+ Y+H 
Sbjct: 91  VRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 49.8 bits (119), Expect = 3e-08
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 19  EVDNLKSLSHPNIVTL--YESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           E++ LK L H NIV    +E+    + + +FLEYV GG + S +    +  E+  +    
Sbjct: 58  EIETLKDLDHLNIVQYLGFETTE--EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTE 115

Query: 77  QIAMALQYLHS 87
           Q+   L YLHS
Sbjct: 116 QVLEGLAYLHS 126

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           +PN + LY SV       + ++Y++ GDL   ++   KLSE   K I+ Q+  AL  LH 
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK 127

Length = 267

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVY 76
            E+  LK    P IV  Y S     ++++ +EY   G +   ++   K L+EE    I+Y
Sbjct: 47  KEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILY 106

Query: 77  QIAMALQYLHS 87
           Q    L+YLHS
Sbjct: 107 QTLKGLEYLHS 117

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL----- 56
           K ++     + RK F  E + L +  H NIV  Y      D   M  EY++ GDL     
Sbjct: 41  KTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLR 100

Query: 57  ---------KSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
                    KS      +L+      I  QIA  + YL S
Sbjct: 101 SHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS 140

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 49.1 bits (117), Expect = 7e-08
 Identities = 27/71 (38%), Positives = 36/71 (50%)

Query: 17  ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           A E+  LK L H NIV    S L  D++ +FLEYV GG + + +       E   +  V 
Sbjct: 54  AREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVR 113

Query: 77  QIAMALQYLHS 87
           QI   L YLH+
Sbjct: 114 QILKGLNYLHN 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 48.9 bits (117), Expect = 8e-08
 Identities = 19/60 (31%), Positives = 30/60 (50%)

Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HP +  L+     KD ++  +EYV GGDL   I+   +  E   +    +I + LQ+LH 
Sbjct: 55  HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE 114

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 48.7 bits (116), Expect = 8e-08
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-- 65
           + K+ R    NE   LK LSHPNI+  YE+ L    + + +EY  GG L   I+      
Sbjct: 38  MTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSL 97

Query: 66  LSEETCKCIVYQIAMALQYLHS 87
           L E+T      QI +AL ++H+
Sbjct: 98  LDEDTILHFFVQILLALHHVHT 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 48.6 bits (116), Expect = 9e-08
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 1   MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K+VQ    +D + R+    E+D LK L HPN++    S +  + + + LE    GDL  
Sbjct: 32  LKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSR 91

Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I+   K    + E T      Q+  AL+++HS
Sbjct: 92  MIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLK-------SKIEACVK--L 66
           F  E+D  + LSH N+V L       +  YM LEY   GDLK       SK E      L
Sbjct: 55  FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114

Query: 67  SEETCKCIVYQIAMALQYL 85
           S +    +  QIA+ + +L
Sbjct: 115 STKQKVALCTQIALGMDHL 133

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 3   EVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA 62
           ++     +E+RK    EV  L ++ HPNIV   ES     N+Y+ ++Y +GGDL  KI A
Sbjct: 37  KMSPKEREESRK----EVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA 92

Query: 63  --CVKLSEETCKCIVYQIAMALQYLH 86
              V   E+       QI +AL+++H
Sbjct: 93  QRGVLFPEDQILDWFVQICLALKHVH 118

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 60  QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 118

Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL YLH+
Sbjct: 119 QIATVCLSVLRALSYLHN 136

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIV 75
           E+  L +L HPNIV L E V+ K  D+I++ +EY +  DL S ++      SE   KC++
Sbjct: 56  EITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLM 114

Query: 76  YQIAMALQYLHS 87
            Q+   LQYLH 
Sbjct: 115 LQLLRGLQYLHE 126

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           MKE++        +    E   L  + HPNIV   ES     ++Y+ +EY  GGDL  KI
Sbjct: 30  MKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKI 89

Query: 61  --EACVKLSEETCKCIVYQIAMALQYLH 86
             +      E+T      Q+ + +Q++H
Sbjct: 90  KLQRGKLFPEDTILQWFVQMCLGVQHIH 117

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
           E+  L+ L H NI+ L + +          +Y+  E ++  DL   I++   L+++  + 
Sbjct: 49  EIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQY 107

Query: 74  IVYQIAMALQYLHS 87
            +YQI   L+YLHS
Sbjct: 108 FLYQILRGLKYLHS 121

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 47.1 bits (112), Expect = 3e-07
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 3   EVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA 62
           ++ +   KE R+   NE+  L S++HPNI++  E+ L  + + + +EY   GDL   I  
Sbjct: 34  DLGSMSQKE-REDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK 92

Query: 63  CVK----LSEETCKCIVYQIAMALQYLHSL 88
             K    + E+    I  Q+   LQ LH  
Sbjct: 93  RKKKRKLIPEQEIWRIFIQLLRGLQALHEQ 122

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 1   MKEV-QNALDKENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGD--- 55
           +K + +  + K N+ K    E + L +L HP + TLY S   +  + + ++Y  GG+   
Sbjct: 31  LKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFR 90

Query: 56  -LKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
            L+ +   C  LSEE  +    ++ +AL+YLH L
Sbjct: 91  LLQRQPGKC--LSEEVARFYAAEVLLALEYLHLL 122

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 47.2 bits (112), Expect = 3e-07
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
             A +KE  K    EVD LKSL H NIV    + L  + I +F+E+V GG + S +    
Sbjct: 39  VLAAEKEYEK-LQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG 97

Query: 65  KLSEETCKCIVYQIAMALQYLH 86
            L E        QI   + YLH
Sbjct: 98  PLPEPVFCKYTKQILDGVAYLH 119

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL-KSK 59
           +K ++  +++  +K    E+D L   + P IV  Y +     +I + +EY+ GG L K  
Sbjct: 31  VKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL 90

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHS 87
            E   ++ E     I   +   L YLH 
Sbjct: 91  KEVQGRIPERILGKIAVAVLKGLTYLHE 118

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 46.7 bits (111), Expect = 5e-07
 Identities = 25/66 (37%), Positives = 36/66 (54%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           LK++ HP +V L+ S    D +Y  L+YV GG+L   ++      E   +    +IA AL
Sbjct: 50  LKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASAL 109

Query: 83  QYLHSL 88
            YLHSL
Sbjct: 110 GYLHSL 115

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 46.1 bits (109), Expect = 6e-07
 Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 4   VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDL--KSKI 60
           ++NA  +E RK    E   L  L HPNIV   ES   +D  +Y+ + + +GGDL  K K 
Sbjct: 35  LRNASRRE-RKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE 93

Query: 61  EACVKLSEETCKCIVYQIAMALQYLH 86
           +    L E        QIAMALQYLH
Sbjct: 94  QKGKLLPENQVVEWFVQIAMALQYLH 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           MK++  + +++  R+   +E   L  L    I+  YES L K  + + +EY + GDL   
Sbjct: 30  MKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKL 89

Query: 60  IEACVK--LSEETCKCIVYQIAMALQYLHS 87
           ++      L E+       QI + L +LHS
Sbjct: 90  LKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  +  + H NI+ L +  +  D I + ++ +   DLK  ++  ++L+E   KCI+ QI
Sbjct: 70  ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQI 128

Query: 79  AMALQYLHS 87
              L  LH 
Sbjct: 129 LNGLNVLHK 137

Length = 335

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVY 76
           E+  LK L+HPNIV L + V  ++ +Y+  E++   DLK  +++     L     K  +Y
Sbjct: 48  EISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLY 106

Query: 77  QIAMALQYLHS 87
           Q+   + Y HS
Sbjct: 107 QLLQGIAYCHS 117

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 45.8 bits (108), Expect = 9e-07
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 58  QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 116

Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 117 QIAAVCLAVLKALSVLHA 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
           E+D L S  HPNIV L ++  +++N+++ +E+  GG + +  +E    L+E   + +  Q
Sbjct: 52  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQ 111

Query: 78  IAMALQYLH 86
              AL YLH
Sbjct: 112 TLEALNYLH 120

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 6/93 (6%)

Query: 1   MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K+VQ  + +D + R     E+D LK L+HPN++  Y S +  + + + LE    GDL  
Sbjct: 32  LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 91

Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I+   K    + E+T      Q+  AL+++HS
Sbjct: 92  MIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQ 77
           E+  L+ L HPNI+ L +    K NI +  E+++  DL+  I+   + L+    K  +  
Sbjct: 52  EIKLLQELKHPNIIGLLDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSYMLM 110

Query: 78  IAMALQYLHS 87
               L+YLHS
Sbjct: 111 TLRGLEYLHS 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI----EACVKLSEETCKCIVYQIA 79
           + L HPNIV  Y++ L  D +Y+ ++ ++G  L        E   + +EE    I  Q+ 
Sbjct: 64  EQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMV 123

Query: 80  MALQYLH 86
           +AL+YLH
Sbjct: 124 LALRYLH 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           KE +   A     LK++ HP +V L+ S    + +Y  L++V GG+L   ++      E 
Sbjct: 37  KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEP 96

Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
             +    +IA AL YLHS+  V +  KP  I
Sbjct: 97  RARFYAAEIASALGYLHSINIVYRDLKPENI 127

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 17/60 (28%), Positives = 32/60 (53%)

Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HP +  L+ +   K++++  +EY+ GGDL   I++  +  E   +    +I   LQ+LH 
Sbjct: 55  HPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHK 114

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 25  SLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
           +  HP +  L+     KD ++  +EYV GGDL  +I+   K  E   +    ++ +AL +
Sbjct: 52  AAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMF 111

Query: 85  LHSLMSVNQHKPRYIAWKVGSIL 107
           LH      +H   Y   K+ +IL
Sbjct: 112 LH------RHGVIYRDLKLDNIL 128

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 26/79 (32%), Positives = 39/79 (49%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           KE     A     LK+L HP +V L+ S    + +Y  L+YV GG+L   ++      E 
Sbjct: 37  KEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEP 96

Query: 70  TCKCIVYQIAMALQYLHSL 88
             +    ++A A+ YLHSL
Sbjct: 97  RARFYAAEVASAIGYLHSL 115

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
               R+ F  EV  L  LS PNI  L         + M +EY++ GDL   ++  V  + 
Sbjct: 59  SDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETS 118

Query: 69  ETC--------KCIVY---QIAMALQYLHSL 88
                        ++Y   QIA  ++YL SL
Sbjct: 119 GLACNSKSLSFSTLLYMATQIASGMRYLESL 149

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL----KSKIEACVKLSEETCKCI 74
           EV  +   +HPN+V  Y S +  D +++ + Y+ GG L    KS       L E     +
Sbjct: 49  EVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGG-LDEAIIATV 107

Query: 75  VYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAG 109
           + ++   L+YLHS    N    R I  K G+IL G
Sbjct: 108 LKEVLKGLEYLHS----NGQIHRDI--KAGNILLG 136

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  +K L +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 53  NLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC- 111

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LH+
Sbjct: 112 -MDEAQIAAVCRECLQALEFLHA 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 23  LKSLSHPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEACVK--LSEETCKCIV 75
           L+S  HPNIV L +            + +  E+V   DL + +  C K  L  ET K ++
Sbjct: 55  LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLM 113

Query: 76  YQIAMALQYLHS 87
            Q+   + +LHS
Sbjct: 114 RQLLRGVDFLHS 125

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 43.8 bits (103), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 8   LDKENRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
           L K+  K+  +E + L K++ HP +V L+ S    D +Y  L+Y+ GG+L   ++     
Sbjct: 34  LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF 93

Query: 67  SEETCKCIVYQIAMALQYLHSL 88
            E   +    +IA AL YLHSL
Sbjct: 94  LEPRARFYAAEIASALGYLHSL 115

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 43.8 bits (103), Expect = 5e-06
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HP +  LY +   K+N++  +EY+ GGDL   I++C K           +I   LQ+LHS
Sbjct: 55  HPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHS 114

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
           E+  LK L+HPNI+ L +    K ++Y+  E++   DL   I+   + L E   K  +YQ
Sbjct: 48  EIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQRGLPESLIKSYLYQ 106

Query: 78  IAMALQYLHS 87
           +   L + HS
Sbjct: 107 LLQGLAFCHS 116

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 43.9 bits (103), Expect = 5e-06
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 1   MKEVQNAL--DKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLK 57
           MK V+  L  D E+  +   E    +  S HP +V L+     +  ++  +EYV GGDL 
Sbjct: 25  MKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 84

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLH 86
             ++   KL EE  +    +I++AL YLH
Sbjct: 85  FHMQRQRKLPEEHARFYSAEISLALNYLH 113

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 5e-06
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 20/93 (21%)

Query: 14  KYFA------------NEVDNLKS--------LSHPNIVTLYESVLWKDNIYMFLEYVQG 53
            YFA            N+V N+K+           P +  LY S   KD +Y+ +EY+ G
Sbjct: 22  DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81

Query: 54  GDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           GD  S I+    L E+  K  + ++ + ++ LH
Sbjct: 82  GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLH 114

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 43.5 bits (102), Expect = 6e-06
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 17/96 (17%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           +K  +  L  + +  F  E   LK  SHPNIV L      K  IY+ +E VQGGD  +  
Sbjct: 25  VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 84

Query: 59  -------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                  K++  +++ E          A  ++YL S
Sbjct: 85  RTEGPRLKVKELIQMVENA--------AAGMEYLES 112

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 43.2 bits (102), Expect = 9e-06
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 1   MKEVQNALDKENRKYFAN---EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLK 57
           MK ++ A    N+K  A+   E + L+++ HP IV L  +      +Y+ LEY+ GG+L 
Sbjct: 29  MKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF 88

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
             +E      E+T    + +I++AL++LH  
Sbjct: 89  MHLEREGIFMEDTACFYLSEISLALEHLHQQ 119

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   HPNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 53  NLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 111

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 112 -MDEGQIAAVCRECLQALEFLHS 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 36/58 (62%)

Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           PN+V L++ ++ +D++++ L++ +GG L S I   + + EE  K    ++ +AL  LH
Sbjct: 45  PNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALH 102

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 23/79 (29%), Positives = 36/79 (45%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           DK  +K    E+  LK L H N+V L E    K  +Y+  E+V    L    +    L E
Sbjct: 40  DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDE 99

Query: 69  ETCKCIVYQIAMALQYLHS 87
              +  ++QI   +++ HS
Sbjct: 100 SRVRKYLFQILRGIEFCHS 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 1   MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K+VQ    +D + R+    E+D LK L+HPN++   +S +  + + + LE    GDL  
Sbjct: 32  LKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQ 91

Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I+   K    + E T      Q+  A++++HS
Sbjct: 92  MIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           E+  LK+L H  IV  Y  +    +  + +F+EY+ GG +K +++A   L+E   +    
Sbjct: 54  EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTR 113

Query: 77  QIAMALQYLHSLMSVNQ 93
           QI   + YLHS M V++
Sbjct: 114 QILEGMSYLHSNMIVHR 130

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
           E++ L + +HP IV L  +  W   +++ +E+  GG + +  +E    L+E   + I  Q
Sbjct: 59  EIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQ 118

Query: 78  IAMALQYLHSL 88
           +  ALQYLHS+
Sbjct: 119 MLEALQYLHSM 129

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 1   MKEVQNALDKENRKYFA-NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K V+   D E     A  E+  LK L H NIV LY+ +     + +  EY    DLK  
Sbjct: 30  LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKY 88

Query: 60  IEACV-KLSEETCKCIVYQIAMALQYLHS 87
            ++C   +  E  K  ++Q+   L + HS
Sbjct: 89  FDSCNGDIDPEIVKSFMFQLLKGLAFCHS 117

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKIEACVK---LSEETCKCI 74
           E+  LK L HPNIV L + VL +++ +Y+  E++   DLK  +++  K   +  E  K  
Sbjct: 49  EISLLKELQHPNIVCL-QDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSY 106

Query: 75  VYQIAMALQYLHS 87
           +YQI   + + HS
Sbjct: 107 LYQILQGILFCHS 119

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
            L +  +     EV+ ++ L H NIV   +  L K N  +Y+ +E+   GDL   I+ C 
Sbjct: 50  GLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCY 109

Query: 65  KL----SEETCKCIVYQIAMALQYLHSL 88
           K+     E     I  Q+  AL Y H+L
Sbjct: 110 KMFGKIEEHAIVDITRQLLHALAYCHNL 137

Length = 1021

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
           E   LK L H NIVTL++ +  K  + +  EY+   DLK  ++ C   LS    +  ++Q
Sbjct: 53  EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQ 111

Query: 78  IAMALQYLHS 87
           +   L Y H 
Sbjct: 112 LLRGLAYCHQ 121

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI--EACVKL 66
             ++ +    E+  LK   HPNIV  + S L +D +++ +EY  GG L   I       L
Sbjct: 40  PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL-QDIYQVTRGPL 98

Query: 67  SEETCKCIVYQIAMALQYLHSL 88
           SE     +  +    L YLH  
Sbjct: 99  SELQIAYVCRETLKGLAYLHET 120

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 1   MKEVQNALDKENRKYFAN-EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +KE+       N    AN E   L  L HP IV  + S L +D   +  EY +G DL  K
Sbjct: 33  LKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCK 92

Query: 60  IEACVK----LSEETCKCIVYQIAMALQYLH 86
           +E        LSE        Q+ + + Y+H
Sbjct: 93  LEELKHTGKTLSENQVCEWFIQLLLGVHYMH 123

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  L     P I   Y S L    +++ +EY  GG     ++   KL E     I+ ++
Sbjct: 49  EIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREV 107

Query: 79  AMALQYLHS 87
            + L+YLH 
Sbjct: 108 LLGLEYLHE 116

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 8   LDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWK------DNIYMFLEYVQGG---DLK 57
           + ++  +    E + L+  S HPNI T Y + + K      D +++ +E   GG   DL 
Sbjct: 41  IIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLV 100

Query: 58  SKIEACVK-LSEETCKCIVYQIAMALQYLHS 87
             +    K L EE    I+ +    L YLH 
Sbjct: 101 KGLRKKGKRLKEEWIAYILRETLRGLAYLHE 131

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)

Query: 23  LKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           LK + H N++ L        S+    ++Y+    + G DL + I  C KLS++  + +VY
Sbjct: 68  LKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADL-NNIVKCQKLSDDHIQFLVY 125

Query: 77  QIAMALQYLHS 87
           QI   L+Y+HS
Sbjct: 126 QILRGLKYIHS 136

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 21/69 (30%), Positives = 33/69 (47%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  +K   H NIV  + S L +D +++ +E+  GG L+        LSE     +  + 
Sbjct: 56  EIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRET 115

Query: 79  AMALQYLHS 87
              L YLHS
Sbjct: 116 LQGLYYLHS 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE--TCKCIVY 76
           E+  LK + H NIV L + V  +  +Y+  EY+   DLK  +++    ++     K  +Y
Sbjct: 51  EISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLY 109

Query: 77  QIAMALQYLHS 87
           QI   + Y HS
Sbjct: 110 QILRGIAYCHS 120

Length = 294

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN--------IYMFLEYVQGGDLKSKIE-ACVKLSEE 69
           E+  LK L HPN+V L +  + + +        +YM   Y    DL   +E   VKL+E 
Sbjct: 57  EIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPY-MDHDLSGLLENPSVKLTES 115

Query: 70  TCKCIVYQIAMALQYLHS 87
             KC + Q+   + YLH 
Sbjct: 116 QIKCYMLQLLEGINYLHE 133

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 23/100 (23%)

Query: 10  KENRKYFA------------NEVDNLKS----------LSHPNIVTLYESVLWKDNIYMF 47
           K+  + +A            +EV++L              HP +V L+     +D++   
Sbjct: 21  KKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80

Query: 48  LEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           +EY  GGDL   I   V  SE         + + LQYLH 
Sbjct: 81  MEYAAGGDLMMHIHTDV-FSEPRAVFYAACVVLGLQYLHE 119

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
           E+  L++  HP +V L +         + +EY+   DL   +    + L E   K  +  
Sbjct: 49  EIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRM 107

Query: 78  IAMALQYLHSL 88
           +   + Y+H+ 
Sbjct: 108 LLKGVAYMHAN 118

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 10/87 (11%)

Query: 5   QNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDN---IYMFLEYVQGGDLKSKI 60
           +NA D + R +   E+  L+ L  HPNIV L  +V+  +N   IY+  EY++  DL + I
Sbjct: 45  RNATDAQ-RTF--REIMFLQELGDHPNIVKLL-NVIKAENDKDIYLVFEYMET-DLHAVI 99

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
            A + L +   + I+YQ+  AL+Y+HS
Sbjct: 100 RANI-LEDVHKRYIMYQLLKALKYIHS 125

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           E+  LK+L H  IV  Y  +    +  + +F+EY+ GG +K +++A   L+E   +    
Sbjct: 54  EIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTR 113

Query: 77  QIAMALQYLHSLMSVNQ 93
           QI   + YLHS M V++
Sbjct: 114 QILQGVSYLHSNMIVHR 130

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--- 65
           D+    Y  +E+  L +  H  IV  ++     D + + +EY  GGDL  +I+  +K   
Sbjct: 105 DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHL 164

Query: 66  -LSEETCKCIVYQIAMALQYLHS 87
              E     + YQI +AL  +HS
Sbjct: 165 PFQEYEVGLLFYQIVLALDEVHS 187

Length = 478

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 1   MKEV--QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           MK++  QN + +   +    E D L    +P +V+++ S   K ++ M +EYV+GGD  +
Sbjct: 31  MKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCAT 90

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHS 87
            ++    L  +  +    +  +AL+YLH+
Sbjct: 91  LLKNIGALPVDMARMYFAETVLALEYLHN 119

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
           EV  LK L H NIVTL++ V    ++ +  EY+   DLK  ++ C   +S    K  +YQ
Sbjct: 54  EVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQ 112

Query: 78  IAMALQYLH 86
           I   L Y H
Sbjct: 113 ILRGLAYCH 121

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 20/101 (19%)

Query: 7   ALDKEN----RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL------ 56
            L +      ++ F  E + +  L HPNIV L      +    M  EY+  GDL      
Sbjct: 42  TLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVR 101

Query: 57  KSKIE--ACVKLSEETCKC--------IVYQIAMALQYLHS 87
            S           E             I  QIA  ++YL S
Sbjct: 102 NSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS 142

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 40.6 bits (95), Expect = 7e-05
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 1   MKEVQNAL--DKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLK 57
           MK ++  L  D E+  +   E    ++ S HP +V L+     +  ++  +E+V GGDL 
Sbjct: 25  MKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLM 84

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
             ++   KL EE  +    +I++AL +LH 
Sbjct: 85  FHMQRQRKLPEEHARFYSAEISLALNFLHE 114

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 8e-05
 Identities = 20/55 (36%), Positives = 29/55 (52%)

Query: 2  KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
          K  ++ L  + ++ F  E + LK   HPNIV L    + K  IY+ +E V GG L
Sbjct: 25 KTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 19  EVDNLKSLSH---PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
           EV  L  L     PNI   Y S L    +++ +EY +GG +++ ++A   ++E+    I+
Sbjct: 49  EVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVII 107

Query: 76  YQIAMALQYLHS 87
            ++ +AL+Y+H 
Sbjct: 108 REVLVALKYIHK 119

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           +HP +  LY      D ++  +E+V GGDL   I+   +  E   +    +I  AL +LH
Sbjct: 54  NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLH 113

Query: 87  S 87
            
Sbjct: 114 D 114

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 1  MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
          +K+   A        F  E   + +L HPN+V L   VL  + +Y+  EY+  G L
Sbjct: 37 LKDDSTAAQA-----FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 11/104 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL---- 56
           +K ++   +K  R  F  E+  +  L  PNI+ L    +  D + M  EY++ GDL    
Sbjct: 51  VKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110

Query: 57  -------KSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
                   ++    V +S  T   +  QIA  ++YL SL  V++
Sbjct: 111 SRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHR 154

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 20/60 (33%), Positives = 33/60 (55%)

Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           S+P +V L+        +++ +EYV GGDL   ++   KL EE  +    +I +AL +LH
Sbjct: 54  SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLH 113

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 54  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVY 76
           E+  LK L+HPNIV L + +  ++ +Y+  E++   DLK  ++A     +     K  ++
Sbjct: 49  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLF 107

Query: 77  QIAMALQYLHS 87
           Q+   L + HS
Sbjct: 108 QLLQGLAFCHS 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA---CVKLSEETCKCIVYQIAM 80
             L H NIV    S        +F+E V GG L + + +    +K +E+T      QI  
Sbjct: 60  SYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILE 119

Query: 81  ALQYLHSLMSVNQ 93
            L+YLH    V++
Sbjct: 120 GLKYLHDNQIVHR 132

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 28  HPNIVTLYE-SVLWKDN---IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           H NI  LY+  +++  N   +Y++ E ++  DL   I +   L++   +  +YQI   L+
Sbjct: 61  HKNITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLK 119

Query: 84  YLHS 87
           Y+HS
Sbjct: 120 YIHS 123

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
              E D L     P IV LY S   ++++Y+ +EY+ GGDL + +       EET +  +
Sbjct: 48  VRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYI 107

Query: 76  YQIAMALQYLHSL 88
            ++ +AL  +H L
Sbjct: 108 AELVLALDSVHKL 120

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
           E+  LK+L H  IV  Y  +    +  + +F+E++ GG +K ++++   L+E   +    
Sbjct: 54  EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTR 113

Query: 77  QIAMALQYLHSLMSVNQ 93
           QI   + YLHS M V++
Sbjct: 114 QILEGVSYLHSNMIVHR 130

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL-SEETCKCIVYQ 77
           EV  LK+L H NIVTL++ +  +  + +  EY+   DLK  ++ C  L S    K  ++Q
Sbjct: 53  EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQ 111

Query: 78  IAMALQYLH 86
           +   L Y H
Sbjct: 112 LLRGLSYCH 120

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 53  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 111

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL +LHS
Sbjct: 112 -MDEGQIAAVCRECLQALDFLHS 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E D L    +  +V LY S   KDN+Y  ++Y+ GGD+ S +       E+  +  + ++
Sbjct: 51  ERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAEL 110

Query: 79  AMALQYLHSL 88
             A++ +H +
Sbjct: 111 TCAIESVHKM 120

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 33/65 (50%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           LK+  HP + +L  S   KD +   +EYV GG+L   +      SE+  +    +I  AL
Sbjct: 49  LKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSAL 108

Query: 83  QYLHS 87
            YLHS
Sbjct: 109 DYLHS 113

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 20/65 (30%), Positives = 30/65 (46%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           L++  HP +  L  S    D +   +EY  GG+L   +      SE+  +    +I  AL
Sbjct: 49  LQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 108

Query: 83  QYLHS 87
            YLHS
Sbjct: 109 GYLHS 113

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 16/60 (26%), Positives = 34/60 (56%)

Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           P +VTL+ +      +++ L+Y+ GG+L + +    +  E+  +    +I +AL++LH L
Sbjct: 65  PFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL 124

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K  +N      R+ F  E   ++   HP+IV L   V+ ++ +++ +E    G+L+S ++
Sbjct: 40  KTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLI-GVITENPVWIVMELAPLGELRSYLQ 98

Query: 62  A-CVKLSEETCKCIVYQIAMALQYLHS 87
                L   +     YQ++ AL YL S
Sbjct: 99  VNKYSLDLASLILYSYQLSTALAYLES 125

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 22/81 (27%), Positives = 42/81 (51%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L+KE   +   E D L    +P +V LY S   ++ +Y+ +EY+ GGD+ + +      +
Sbjct: 40  LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFT 99

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           EE  +  + +  +A+  +H L
Sbjct: 100 EEETRFYIAETILAIDSIHKL 120

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K +   L++   ++   E D L +     +V L  +    + +Y+ +EYV GGD ++ + 
Sbjct: 36  KSLLFKLNE--VRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLN 93

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSL 88
               LSE+  +  + ++  A+  LH L
Sbjct: 94  NLGVLSEDHARFYMAEMFEAVDALHEL 120

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  +  L+HP+I+ +  +     +  +F+E++ GG +   +       E        Q+
Sbjct: 53  EIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQL 112

Query: 79  AMALQYLH 86
              L YLH
Sbjct: 113 LRGLSYLH 120

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 16/93 (17%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--------------DNIYMFLEYVQGG 54
           D ++ K+   E+  ++ L H NIV +YE +                 +++Y+  EY++  
Sbjct: 42  DPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET- 100

Query: 55  DLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           DL + +E    LSEE  +  +YQ+   L+Y+HS
Sbjct: 101 DLANVLEQG-PLSEEHARLFMYQLLRGLKYIHS 132

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 13  RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETC 71
           +K    E+  LK L HPN+V L E    K  +++  EY     L +++E   + + E   
Sbjct: 44  KKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVL-NELEKNPRGVPEHLI 102

Query: 72  KCIVYQIAMALQYLHS 87
           K I++Q   A+ + H 
Sbjct: 103 KKIIWQTLQAVNFCHK 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 22/83 (26%), Positives = 42/83 (50%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK 65
           + L+KE   +   E D L       +V ++ S   K N+Y+ +E++ GGD+ + +     
Sbjct: 38  DMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT 97

Query: 66  LSEETCKCIVYQIAMALQYLHSL 88
           LSEE  +  + +  +A+  +H L
Sbjct: 98  LSEEATQFYIAETVLAIDAIHQL 120

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 20/84 (23%), Positives = 42/84 (50%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           ++ L++    +   E D L    +  +V LY S   KDN+Y  ++Y+ GGD+ S +    
Sbjct: 37  KDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME 96

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
              E   +  + ++ +A++ +H +
Sbjct: 97  VFPEVLARFYIAELTLAIESVHKM 120

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL-SEETCKCIVYQ 77
           EV  LK L H NIVTL++ +  + ++ +  EY+   DLK  ++ C    +    K  ++Q
Sbjct: 54  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQ 112

Query: 78  IAMALQYLH 86
           +   L Y H
Sbjct: 113 LLRGLNYCH 121

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 12/105 (11%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLK--- 57
           +K ++  + K  R  F  E+  +  L +PNI+ L    +  D + M  EY++ GDL    
Sbjct: 49  VKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108

Query: 58  SKIEACVKLSE-ETCKCIVY--------QIAMALQYLHSLMSVNQ 93
           S+ E     +       +          QIA  ++YL SL  V++
Sbjct: 109 SQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHR 153

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET----C 71
           F  E   + SL H N++ LY  VL    + M  E    G L  ++     L        C
Sbjct: 43  FLKEAAIMHSLDHENLIRLYGVVL-THPLMMVTELAPLGSLLDRLR-KDALGHFLISTLC 100

Query: 72  KCIVYQIAMALQYLHS 87
              V QIA  ++YL S
Sbjct: 101 DYAV-QIANGMRYLES 115

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)

Query: 19  EVDNLKSLS-HPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVK----LSE 68
           E + LK+LS HPN+V  Y     + V   D +++ LE   GG +   ++  +K    + E
Sbjct: 64  EYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEE 123

Query: 69  ETCKCIVYQIAMALQYLH 86
                I+++  M LQ+LH
Sbjct: 124 PIIAYILHEALMGLQHLH 141

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           +E+ ++  L HPNIV L      +   Y+  EY++G +L    E    LS E  + I   
Sbjct: 732 SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS---EVLRNLSWERRRKIAIG 788

Query: 78  IAMALQYLH 86
           IA AL++LH
Sbjct: 789 IAKALRFLH 797

Length = 968

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 21/69 (30%), Positives = 33/69 (47%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  +K   H NIV  + S L ++ +++ +EY  GG L+        LSE     +  + 
Sbjct: 56  EIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRET 115

Query: 79  AMALQYLHS 87
              L YLHS
Sbjct: 116 LQGLAYLHS 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           P +  L+      D +Y  +EYV GGDL   I+   K  E        +IA+ L +LHS
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHS 119

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIE-----ACVKLSEETC 71
           E+  L+ L H N+V+L E  L   +  +Y+  +Y +  DL   I+       V +     
Sbjct: 52  EIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMV 110

Query: 72  KCIVYQIAMALQYLHS 87
           K +++QI   + YLHS
Sbjct: 111 KSLLWQILNGVHYLHS 126

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)

Query: 19  EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  LK + H N++ L +      S+   +++Y+ + ++ G DL + I  C KL+++  +
Sbjct: 66  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 123

Query: 73  CIVYQIAMALQYLHS 87
            ++YQI   L+Y+HS
Sbjct: 124 FLIYQILRGLKYIHS 138

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 1   MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           MK ++ A  L+KE   +   E D L       +V ++ S   K N+Y+ +E++ GGD+ +
Sbjct: 31  MKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMT 90

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHSL 88
            +     L+EE  +  + +  +A+  +H L
Sbjct: 91  LLMKKDTLTEEETQFYIAETVLAIDSIHQL 120

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
           E+  L+   H NI+ + + +         +Y+ ++ +   DL   I +   L+EE  +  
Sbjct: 54  ELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMD-LMESDLHHIIHSDQPLTEEHIRYF 112

Query: 75  VYQIAMALQYLHS 87
           +YQ+   L+Y+HS
Sbjct: 113 LYQLLRGLKYIHS 125

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 21/58 (36%), Positives = 29/58 (50%)

Query: 1  MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
          +K  +  L +E +  F +E   LK   HPNIV L      +  IY+ +E V GGD  S
Sbjct: 24 VKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 1   MKEVQNALDKENR---KYFANEVDNLKSLSHPNIVTLYESVL------WKDNIYMFLEYV 51
           +K++ NA D  NR   K    E+  L+ L H N++ + + +       + D +Y+  E +
Sbjct: 35  IKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND-VYIVYELM 91

Query: 52  QGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
              DL   I +   LS++ C+  +YQ+   L+Y+HS
Sbjct: 92  DT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS 126

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K +++A D   RK F  E + L +L H +IV  Y   +  D + M  EY++ GDL   +
Sbjct: 40  VKTLKDASDNA-RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Query: 61  EA-------------CVKLSEETCKCIVYQIAMALQYLHS 87
            A               +L++     I  QIA  + YL S
Sbjct: 99  RAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK---LSEETCKCIV 75
           E+  +K L H NIV L++ +  ++ + +  EY+   DLK  ++       L   T K   
Sbjct: 48  EISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFT 106

Query: 76  YQIAMALQYLH 86
           YQ+   + + H
Sbjct: 107 YQLLKGIAFCH 117

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           P +  L+      D +Y  +EYV GGDL  +I+   +  E        +IA+ L +LHS
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHS 119

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 19  EVDNLKSLSHPNIVTLYESVL------WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  L+ L HP+IV +   +L      +KD IY+  E +   DL   I+A   L+ E  +
Sbjct: 49  EIKLLRLLRHPDIVEIKHIMLPPSRREFKD-IYVVFE-LMESDLHQVIKANDDLTPEHHQ 106

Query: 73  CIVYQIAMALQYLHS 87
             +YQ+  AL+Y+H+
Sbjct: 107 FFLYQLLRALKYIHT 121

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +KE++ +   + +  F  E    +SL H N++             + +E+   GDLK  +
Sbjct: 27  VKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYL 86

Query: 61  EACVKLSEETCKCIV-----YQIAMALQYLH 86
            +C K    T           +IA+ L +LH
Sbjct: 87  RSCRKAELMTPDPTTLQRMACEIALGLLHLH 117

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           P +VTL+ +   +  +++ L+YV GG++ + +      SE+  +    +I +AL++LH L
Sbjct: 65  PFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL 124

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
KOG0595|consensus	429		100.0
KOG0615|consensus	475		99.98
KOG0611|consensus	668		99.97
KOG0581|consensus	364		99.97
KOG0598|consensus	357		99.97
KOG0616|consensus	355		99.97
KOG0575|consensus	592		99.96
KOG0583|consensus	370		99.95
KOG0600|consensus	560		99.95
KOG0661|consensus	538		99.95
KOG0599|consensus	411		99.95
KOG0192|consensus	362		99.95
KOG0588|consensus	786		99.95
KOG0582|consensus	516		99.95
KOG0593|consensus	396		99.95
KOG0578|consensus	550		99.95
KOG0591|consensus	375		99.95
KOG0592|consensus	604		99.94
KOG0198|consensus	313		99.94
KOG0605|consensus	550		99.93
KOG0197|consensus	468		99.93
KOG0589|consensus	426		99.93
KOG0586|consensus	596		99.93
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.93
KOG0694|consensus	694		99.93
KOG0033|consensus	355		99.93
KOG0659|consensus	318		99.92
KOG0577|consensus	948		99.92
KOG0580|consensus	281		99.92
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.92
KOG0584|consensus	632		99.92
KOG0597|consensus	808		99.92
KOG0594|consensus	323		99.92
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.92
KOG0610|consensus	459		99.92
KOG0585|consensus	576		99.92
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.92
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.92
KOG1187|consensus	361		99.92
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.92
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.91
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.91
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
PTZ00267	478	NIMA-related protein kinase; Provisional	99.91
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.91
KOG0579|consensus	1187		99.91
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.91
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.91
KOG0032|consensus	382		99.91
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.91
KOG0660|consensus	359		99.91
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.91
KOG0663|consensus	419		99.91
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.9
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.9
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.9
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.9
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.9
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.9
KOG0614|consensus	732		99.9
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.9
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.9
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.9
KOG0608|consensus	1034		99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.9
KOG0194|consensus	474		99.9
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.9
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.9
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.9
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.9
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.9
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.9
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.9
KOG0607|consensus	463		99.9
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.89
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.89
KOG1026|consensus	774		99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
KOG0690|consensus	516		99.89
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.89
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.89
KOG4236|consensus	888		99.89
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.89
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.89
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.89
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.89
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.89
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.89
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.89
KOG4250|consensus	732		99.89
KOG0193|consensus	678		99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
KOG4717|consensus	864		99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.89
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.89
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.89
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.88
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.88
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.88
PHA02988	283	hypothetical protein; Provisional	99.88
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.88
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.88
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.88
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.88
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.88
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.88
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.88
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.88
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.88
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.88
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.88
KOG0612|consensus	1317		99.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.88
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.88
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.88
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.88
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.88
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.88
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.87
KOG0574|consensus	502		99.87
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.87
KOG0201|consensus	467		99.87
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.87
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.87
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.87
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.87
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.87
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.87
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.87
KOG1989|consensus	738		99.87
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.87
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.87
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.87
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.87
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.87
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.87
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.87
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.87
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.87
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.87
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.87
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.87
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.87
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.87
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.86
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.86
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.86
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.86
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.86
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.86
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.86
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.86
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.86
KOG1094|consensus	807		99.86
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.86
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.86
KOG0662|consensus	292		99.86
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.86
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.86
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.86
KOG4721|consensus	904		99.86
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.86
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.86
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.86
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.86
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.86
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.86
KOG1095|consensus	1025		99.86
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.86
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.86
KOG0658|consensus	364		99.86
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.86
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.86
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.86
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.86
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.86
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.85
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.85
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.85
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.85
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.85
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.85
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.85
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.85
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.85
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.85
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.85
KOG0986|consensus	591		99.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.85
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.85
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.85
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.85
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.85
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.85
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.85
PTZ00283	496	serine/threonine protein kinase; Provisional	99.85
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.85
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.85
PHA03207	392	serine/threonine kinase US3; Provisional	99.85
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.85
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.85
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.85
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.85
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.85
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.85
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.85
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.85
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.85
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.84
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.84
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.84
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.84
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.84
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.84
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.84
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.84
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.84
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.84
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.84
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.84
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.84
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.84
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.84
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.84
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.84
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.84
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.84
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.84
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.84
KOG0604|consensus	400		99.84
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.84
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.83
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.83
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.83
PHA03210	501	serine/threonine kinase US3; Provisional	99.83
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.83
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.83
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.83
KOG4645|consensus	1509		99.83
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.83
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.83
PHA03211	461	serine/threonine kinase US3; Provisional	99.83
PHA03209	357	serine/threonine kinase US3; Provisional	99.83
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.83
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.83
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.83
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.83
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.83
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.82
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.82
KOG0667|consensus	586		99.82
KOG0669|consensus	376		99.82
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.82
KOG0984|consensus	282		99.82
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.82
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.82
KOG0587|consensus	953		99.82
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.82
KOG0695|consensus	593		99.82
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.82
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.82
KOG4278|consensus	1157		99.82
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.82
PLN00009	294	cyclin-dependent kinase A; Provisional	99.82
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.82
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.82
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.82
KOG0196|consensus	996		99.81
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.81
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.81
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.81
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.81
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.81
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.81
KOG0665|consensus	369		99.81
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.81
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.81
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.81
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.81
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.8
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.8
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.8
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.8
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.8
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.8
KOG4257|consensus	974		99.8
PRK10345	210	hypothetical protein; Provisional	99.8
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.8
KOG0666|consensus	438		99.8
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.79
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.79
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.79
KOG1152|consensus	772		99.79
PRK09188	365	serine/threonine protein kinase; Provisional	99.79
KOG0696|consensus	683		99.79
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.79
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.79
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.79
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.79
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.78
KOG0596|consensus	677		99.78
KOG0668|consensus	338		99.78
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.78
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.78
KOG2052|consensus	513		99.78
KOG4279|consensus	1226		99.78
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.78
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.77
PTZ00284	467	protein kinase; Provisional	99.77
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.77
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.77
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.77
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.76
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.76
KOG2345|consensus	302		99.76
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.76
KOG3653|consensus	534		99.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.76
KOG0983|consensus	391		99.76
KOG0576|consensus	829		99.76
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.75
KOG1006|consensus	361		99.75
KOG0200|consensus	609		99.75
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.74
KOG0199|consensus	1039		99.74
KOG0603|consensus	612		99.74
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.73
KOG1035|consensus	1351		99.73
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.73
PHA02882	294	putative serine/threonine kinase; Provisional	99.73
KOG1151|consensus	775		99.73
PRK12274	218	serine/threonine protein kinase; Provisional	99.73
KOG0664|consensus	449		99.71
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.69
KOG1025|consensus	1177		99.69
KOG1027|consensus	903		99.69
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.67
PRK14879	211	serine/threonine protein kinase; Provisional	99.67
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.65
KOG1345|consensus	378		99.64
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.6
smart00090	237	RIO RIO-like kinase.	99.59
KOG1163|consensus	341		99.59
KOG0670|consensus	752		99.59
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.57
KOG1165|consensus	449		99.56
KOG0671|consensus	415		99.56
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.56
PLN00181	793	protein SPA1-RELATED; Provisional	99.53
KOG1290|consensus	590		99.53
KOG1167|consensus	418		99.51
KOG1164|consensus	322		99.5
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.49
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.48
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.47
KOG0590|consensus	601		99.42
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.33
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.3
KOG4158|consensus	598		99.29
KOG1166|consensus	974		99.25
KOG1024|consensus	563		99.24
KOG0603|consensus	612		99.23
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.23
KOG1240|consensus	1431		99.21
KOG1243|consensus	690		99.2
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.12
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.12
KOG3087|consensus	229		99.09
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.08
KOG1023|consensus	484		99.07
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.05
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.99
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.82
KOG0590|consensus	601		98.8
KOG3741|consensus	655		98.76
KOG0195|consensus	448		98.75
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.69
PRK09902	216	hypothetical protein; Provisional	98.64
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.62
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.61
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.61
KOG1266|consensus	458		98.51
KOG0601|consensus	524		98.4
KOG0601|consensus	524		98.32
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.28
KOG1033|consensus	516		98.27
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.01
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.93
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.85
KOG0606|consensus	1205		97.76
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.65
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.55
KOG1235|consensus	538		97.43
KOG0606|consensus	1205		97.25
PF01636	239	APH: Phosphotransferase enzyme family This family	97.24
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.23
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.58
KOG2268|consensus	465		96.53
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.95
COG4248	637	Uncharacterized protein with protein kinase and he	95.42
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.96
KOG2137|consensus	700		94.9
KOG0576|consensus	829		94.89
PLN02876	822	acyl-CoA dehydrogenase	94.53
PHA03111	444	Ser/Thr kinase; Provisional	94.51
KOG2270|consensus	520		94.47
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.3
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.25
PRK05231	319	homoserine kinase; Provisional	94.15
PRK10271	188	thiK thiamine kinase; Provisional	94.07
KOG1035|consensus	1351		93.92
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.91
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.88
PTZ00384	383	choline kinase; Provisional	93.71
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.69
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	93.59
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.42
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.91
PRK10593	297	hypothetical protein; Provisional	92.81
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	92.71
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	92.19
COG2334	331	Putative homoserine kinase type II (protein kinase	92.02
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	89.97
PLN02236	344	choline kinase	89.56
PRK06148	1013	hypothetical protein; Provisional	89.48
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	89.45
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	89.06
KOG2269|consensus	531		87.88
PRK06149	972	hypothetical protein; Provisional	87.64
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	87.23
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	86.06
KOG1236|consensus	565		85.58
PRK11768	325	serine/threonine protein kinase; Provisional	83.49
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	82.67

>KOG0595|consensus

Probab=100.00  E-value=1.2e-32  Score=189.49  Aligned_cols=129  Identities=30%  Similarity=0.457  Sum_probs=118.1

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      ||.+.+. ..++..+.+..|+.+|+.++|||||.++++..+++++|+|||||.||+|.+++..++.+++.+.+.++.|++
T Consensus        40 IK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA  119 (429)
T KOG0595|consen   40 IKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLA  119 (429)
T ss_pred             eeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            4555543 377788889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecC------Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVG------SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~------~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      .|+++||+++|+| ||||+|||++..      -.+||+|||++.   ++..+.+.+|+|+
T Consensus       120 ~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSpl  179 (429)
T KOG0595|consen  120 SALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPL  179 (429)
T ss_pred             HHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCcc
Confidence            9999999999999 999999999875      457999999985   7777888899986

>KOG0615|consensus

Probab=99.98  E-value=1.9e-32  Score=188.92  Aligned_cols=115  Identities=32%  Similarity=0.408  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ..++|+++|+.++|||||+++++|...++.|+|+||++||+|.+.+-..+...+.....+++|++.|+.|||++||+| |
T Consensus       222 ~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRD  301 (475)
T KOG0615|consen  222 DVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRD  301 (475)
T ss_pred             hhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccccc
Confidence            367999999999999999999999999999999999999999999999888999999999999999999999999999 9


Q ss_pred             ccccceEEecC---Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          94 HKPRYIAWKVG---SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        94 lk~~nili~~~---~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      |||+|||+..+   ..+|++|||++.   ..+...+.||||-
T Consensus       302 iKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTps  343 (475)
T KOG0615|consen  302 IKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPS  343 (475)
T ss_pred             CCcceEEeccCCcceEEEecccchhhccccceehhhhcCCcc
Confidence            99999999877   779999999986   5677788899983

>KOG0611|consensus

Probab=99.97  E-value=3e-31  Score=183.91  Aligned_cols=129  Identities=24%  Similarity=0.370  Sum_probs=118.7

Q ss_pred             Ccccc--ccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~--~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||.++  ++.++++.-.+++|+++|+.++||+|+.+|+.|..++.+.+||||..+|.|.+++..++.+++.....+.+|+
T Consensus        83 iKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQI  162 (668)
T KOG0611|consen   83 IKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQI  162 (668)
T ss_pred             hhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHH
Confidence            35555  4568889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      ++|+.|||.++++| |+|.+|||++.++++||+|||+.+   ......++||+|.
T Consensus       163 vSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPL  217 (668)
T KOG0611|consen  163 VSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPL  217 (668)
T ss_pred             HHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcc
Confidence            99999999999999 999999999999999999999875   5566677787774

>KOG0581|consensus

Probab=99.97  E-value=1.4e-30  Score=177.54  Aligned_cols=126  Identities=20%  Similarity=0.265  Sum_probs=114.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe-eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~-~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      |.+....++..++++.+|+++++.++||+||.+|++|..+.. .+++||||.+|+|.++++..+.+++..+..++.++++
T Consensus       110 K~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~  189 (364)
T KOG0581|consen  110 KVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLR  189 (364)
T ss_pred             EeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            555556688889999999999999999999999999999994 9999999999999999999889999999999999999


Q ss_pred             HHHHHHh-ccccc-cccccceEEecCCeeeccceeeee--ccccccCCCCC
Q psy2929          81 ALQYLHS-LMSVN-QHKPRYIAWKVGSILAGGKLYFIE--NRQVRSGNVNG  127 (131)
Q Consensus        81 ~l~~lh~-~~~~h-dlk~~nili~~~~~~kl~df~~~~--~~~~~~~~~gt  127 (131)
                      ||.|||+ .+++| ||||+|||+...|.+||+|||.+.  ..+.+.+++||
T Consensus       190 GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT  240 (364)
T KOG0581|consen  190 GLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGT  240 (364)
T ss_pred             HHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccc
Confidence            9999996 89999 999999999999999999999875  33466666666

>KOG0598|consensus

Probab=99.97  E-value=1.4e-30  Score=177.30  Aligned_cols=128  Identities=23%  Similarity=0.361  Sum_probs=116.0

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||++++.  ....+.+....|..+|..++||+||.++.+|.+...+|+|+||+.||.|..++.+.+.|++.....+++++
T Consensus        55 mKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi  134 (357)
T KOG0598|consen   55 MKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEI  134 (357)
T ss_pred             hhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHH
Confidence            4566643  24456788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGP  128 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp  128 (131)
                      +.||.|||+.||+| |+||+|||++.+|.++++|||++.    ......+++|||
T Consensus       135 ~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~  189 (357)
T KOG0598|consen  135 VLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTP  189 (357)
T ss_pred             HHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCc
Confidence            99999999999999 999999999999999999999985    445566678887

>KOG0616|consensus

Probab=99.97  E-value=4.6e-30  Score=171.15  Aligned_cols=129  Identities=28%  Similarity=0.372  Sum_probs=117.0

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      +|++.+.  .+.+..+...+|..+|+.+.||+++++++++.+.+..|++|||++||.+++++.+.+.|+++..+.++.|+
T Consensus        74 mKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAei  153 (355)
T KOG0616|consen   74 MKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEI  153 (355)
T ss_pred             hhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHH
Confidence            3555533  35567788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee-ccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE-NRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~-~~~~~~~~~gtp~  129 (131)
                      +.|++|+|++++++ |+||+|||++.+|.+|+.|||++. .....-+.||||-
T Consensus       154 vlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPe  206 (355)
T KOG0616|consen  154 VLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPE  206 (355)
T ss_pred             HHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCcc
Confidence            99999999999999 999999999999999999999996 4555777889983

>KOG0575|consensus

Probab=99.96  E-value=4e-29  Score=178.91  Aligned_cols=122  Identities=25%  Similarity=0.338  Sum_probs=115.4

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+..++.+.+|+++-+++.|||||+++++|++..+.|+|.|+|..++|..++++...++++..+.+++|++.|+.|||+
T Consensus        57 ~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~  136 (592)
T KOG0575|consen   57 KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS  136 (592)
T ss_pred             cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            36678888999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++|+| |||..|+|++.+.++||+|||++.    +.....+.||||-
T Consensus       137 ~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPN  183 (592)
T KOG0575|consen  137 LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPN  183 (592)
T ss_pred             cCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCc
Confidence            99999 999999999999999999999984    5577888999994

>KOG0583|consensus

Probab=99.95  E-value=4.1e-28  Score=170.53  Aligned_cols=119  Identities=26%  Similarity=0.332  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++ ||||+++++++.....+|+||||+.||+|.+.+...+.+.+.....++.|++.|+.|||++|
T Consensus        61 ~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g  140 (370)
T KOG0583|consen   61 KLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG  140 (370)
T ss_pred             ccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            34566779999999998 99999999999999999999999999999999999888999999999999999999999999


Q ss_pred             ccc-cccccceEEecC-Ceeeccceeeee----ccccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVG-SILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~-~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++| ||||+|+|++.+ +++|++|||++.    ......+.+|+|.
T Consensus       141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~  186 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPA  186 (370)
T ss_pred             EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcc
Confidence            999 999999999999 999999999986    3456677888874

>KOG0600|consensus

Probab=99.95  E-value=5.3e-28  Score=170.38  Aligned_cols=114  Identities=27%  Similarity=0.342  Sum_probs=102.9

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQ   77 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~   77 (131)
                      |+++.. .++.......||+.+|++++||||++|.+....+  +.+|||+|||+. +|.-++...+ .|+++.+.++++|
T Consensus       148 KKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQ  226 (560)
T KOG0600|consen  148 KKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQ  226 (560)
T ss_pred             EEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHH
Confidence            555533 3566777889999999999999999999999887  689999999987 8988888755 7999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.||+|||.+|+.| |||.+||||+.+|.+||+|||++.
T Consensus       227 Ll~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  227 LLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             HHHHHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence            999999999999999 999999999999999999999986

>KOG0661|consensus

Probab=99.95  E-value=2.3e-28  Score=171.30  Aligned_cols=128  Identities=21%  Similarity=0.298  Sum_probs=110.8

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~   77 (131)
                      ||++++....-+...-.||+..|+.++ ||||+++.+.+.+.+ .+|+|||||+. +|.++++.++ .|++..++.|+.|
T Consensus        40 IK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~Q  118 (538)
T KOG0661|consen   40 IKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQ  118 (538)
T ss_pred             HHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHH
Confidence            355555554445555679999999998 999999999999988 89999999966 9999999765 6999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      ++.||.|+|.+|+.| |+||+|||+.....+||+|||+++   .....+.+++|+|
T Consensus       119 ilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRW  174 (538)
T KOG0661|consen  119 ILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRW  174 (538)
T ss_pred             HHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhccc
Confidence            999999999999999 999999999999999999999986   4555566777766

>KOG0599|consensus

Probab=99.95  E-value=5.5e-28  Score=160.53  Aligned_cols=120  Identities=21%  Similarity=0.258  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .+.++..+.|+.+|+++ .||+|+++.+.|..+.+.|+|+|.++.|.|++++.+...+++.....+++|+..+++|+|.+
T Consensus        63 ~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~  142 (411)
T KOG0599|consen   63 YEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR  142 (411)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh
Confidence            44677788999999999 69999999999999999999999999999999999988999999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +|+| |+||+|||++++.+++++|||++.   ++......||||-
T Consensus       143 ~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPg  187 (411)
T KOG0599|consen  143 NIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPG  187 (411)
T ss_pred             hhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCc
Confidence            9999 999999999999999999999974   7777788899983

>KOG0192|consensus

Probab=99.95  E-value=3.7e-27  Score=164.84  Aligned_cols=110  Identities=27%  Similarity=0.361  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+|..++|||||.++|++.... ...+||||+++|+|.+++..  ...++......++.|++.||+|+|
T Consensus        80 ~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH  159 (362)
T KOG0192|consen   80 DESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH  159 (362)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence            334778999999999999999999999999887 78999999999999999988  457999999999999999999999


Q ss_pred             hcc-ccc-cccccceEEecCC-eeeccceeeeeccc
Q psy2929          87 SLM-SVN-QHKPRYIAWKVGS-ILAGGKLYFIENRQ  119 (131)
Q Consensus        87 ~~~-~~h-dlk~~nili~~~~-~~kl~df~~~~~~~  119 (131)
                      +++ ++| ||||+|+|++.++ .+||+|||++....
T Consensus       160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV  195 (362)
T ss_pred             cCCCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence            999 999 9999999999997 99999999986433

>KOG0588|consensus

Probab=99.95  E-value=8.9e-28  Score=173.80  Aligned_cols=121  Identities=22%  Similarity=0.338  Sum_probs=113.0

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ........+.+|+-+|+.++|||++.+|+.+.++..+|++.||+++|.|++++-+.+++.+.....++.|++.|+.|||.
T Consensus        51 ~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~  130 (786)
T KOG0588|consen   51 LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA  130 (786)
T ss_pred             cccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            35556778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      .+++| |+||+|+|++..+++||+|||.+.   ++....+.||+|
T Consensus       131 ~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSP  175 (786)
T KOG0588|consen  131 FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSP  175 (786)
T ss_pred             hcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCc
Confidence            99999 999999999999999999999885   666777778877

>KOG0582|consensus

Probab=99.95  E-value=7e-27  Score=162.92  Aligned_cols=114  Identities=21%  Similarity=0.299  Sum_probs=103.1

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~   79 (131)
                      |++.-..-..+...+++|+..|+.++||||++++.+|..++++|+||.|+.+|++.++++..-  ++++..+..++++++
T Consensus        57 K~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~L  136 (516)
T KOG0582|consen   57 KIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVL  136 (516)
T ss_pred             EEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHH
Confidence            444433334457889999999999999999999999999999999999999999999998643  699999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .||.|+|.+|.+| |+|+.||||+.+|.+|++|||..
T Consensus       137 kaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs  173 (516)
T KOG0582|consen  137 KALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS  173 (516)
T ss_pred             HHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence            9999999999999 99999999999999999999754

>KOG0593|consensus

Probab=99.95  E-value=2.3e-28  Score=163.84  Aligned_cols=127  Identities=21%  Similarity=0.271  Sum_probs=105.8

Q ss_pred             ccccccc-cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHH
Q psy2929           2 KEVQNAL-DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~   79 (131)
                      |++...- ++...+-..||+++|++++|||+|.+.+.|..+...++|+||++. ++...+.. ..+.+...+..++.|++
T Consensus        33 KkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l  111 (396)
T KOG0593|consen   33 KKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLL  111 (396)
T ss_pred             EeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHH
Confidence            4444333 466777788999999999999999999999999999999999987 55555554 44789999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      .|+.|||.++++| ||||+|||++.+|.+|+||||++.    ++...+.++.|+|
T Consensus       112 ~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRW  166 (396)
T KOG0593|consen  112 KAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRW  166 (396)
T ss_pred             HHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhh
Confidence            9999999999999 999999999999999999999875    3334444444443

>KOG0578|consensus

Probab=99.95  E-value=7.2e-28  Score=171.32  Aligned_cols=117  Identities=25%  Similarity=0.452  Sum_probs=107.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+-+.+|+.+|+..+|+|||.++++|...+.+|.||||++||+|.+.+... .+++..++.++++++.||.|||++|++
T Consensus       313 ~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIi  391 (550)
T KOG0578|consen  313 KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGII  391 (550)
T ss_pred             chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhccee
Confidence            3455789999999999999999999999999999999999999999998775 599999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      | |||.+|||++.+|.+|++||||+.    .....++.+||||
T Consensus       392 HrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPY  434 (550)
T KOG0578|consen  392 HRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPY  434 (550)
T ss_pred             eeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCC
Confidence            9 999999999999999999999975    4446678899998

>KOG0591|consensus

Probab=99.95  E-value=2.9e-28  Score=162.00  Aligned_cols=122  Identities=25%  Similarity=0.355  Sum_probs=107.8

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEE-EEEeCCe-eEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYE-SVLWKDN-IYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMA   81 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~-~~~~~~~-~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~   81 (131)
                      .+.+.++....|+.+|++++|||||++++ .+..+.. .+++||++.+|+|.+.++.-    ..+++.+++.+..|++.|
T Consensus        57 md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~A  136 (375)
T KOG0591|consen   57 MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRA  136 (375)
T ss_pred             ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHH
Confidence            46778888999999999999999999998 5555555 89999999999999999742    258999999999999999


Q ss_pred             HHHHHh--cc--ccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          82 LQYLHS--LM--SVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        82 l~~lh~--~~--~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      |.+||.  ..  +.| ||||.||+++..|.+|++|||++.    ....+.+++||||
T Consensus       137 L~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPy  193 (375)
T KOG0591|consen  137 LYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPY  193 (375)
T ss_pred             HHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCc
Confidence            999999  34  899 999999999999999999999874    6667788899997

>KOG0592|consensus

Probab=99.94  E-value=3.1e-27  Score=167.78  Aligned_cols=115  Identities=27%  Similarity=0.396  Sum_probs=104.6

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~   77 (131)
                      ||++.+.  ..++......+|-..|.++ .||.|++||-.|.++..+|+|+||+++|+|.++|.+.+.|++.-.+.++.+
T Consensus       103 iKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAe  182 (604)
T KOG0592|consen  103 IKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAE  182 (604)
T ss_pred             HhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHH
Confidence            3455432  3455566788899999999 799999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ++.|++|||++|||| ||||+|||++.++.++|+|||-+
T Consensus       183 IldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsA  221 (604)
T KOG0592|consen  183 ILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSA  221 (604)
T ss_pred             HHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccc
Confidence            999999999999999 99999999999999999999865

>KOG0198|consensus

Probab=99.94  E-value=1.5e-26  Score=158.33  Aligned_cols=104  Identities=30%  Similarity=0.393  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .+.+.+|+.+|+.++|||||++++......  .++++|||+++|+|.+++.+.+ .++++.+..+.+|++.||.|+|++|
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g  137 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG  137 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            667899999999999999999999855544  6899999999999999999876 7999999999999999999999999


Q ss_pred             ccc-cccccceEEec-CCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++. ++.+|++|||.+.
T Consensus       138 ~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen  138 IVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             EeccCcccceEEEeCCCCeEEeccCcccc
Confidence            999 99999999999 7999999999775

>KOG0605|consensus

Probab=99.93  E-value=8.4e-26  Score=160.13  Aligned_cols=116  Identities=22%  Similarity=0.353  Sum_probs=107.1

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||++++.  ......+..+.|-.+|....+|+||++|-+|.+..++||+|||++||++..++...+.+++...+.++.+.
T Consensus       171 mK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~  250 (550)
T KOG0605|consen  171 MKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAET  250 (550)
T ss_pred             eecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHH
Confidence            4566543  24556778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.+|..|++| ||||+|+||+..|.+|++|||++.
T Consensus       251 vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  251 VLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             HHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence            99999999999999 999999999999999999999874

>KOG0197|consensus

Probab=99.93  E-value=1.1e-25  Score=159.09  Aligned_cols=105  Identities=22%  Similarity=0.263  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+++|+.++|++||++++.+..+..+|+|+||++.|+|.+++..  +..++.+..+.++.||+.|+.||++++
T Consensus       244 ~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~  323 (468)
T KOG0197|consen  244 SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN  323 (468)
T ss_pred             ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC
Confidence            346788999999999999999999999998899999999999999999997  336899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|| ||.+.|||++.++.+||+|||++.
T Consensus       324 ~IHRDLAARNiLV~~~~~vKIsDFGLAr  351 (468)
T KOG0197|consen  324 YIHRDLAARNILVDEDLVVKISDFGLAR  351 (468)
T ss_pred             ccchhhhhhheeeccCceEEEccccccc
Confidence            999 999999999999999999999987

>KOG0589|consensus

Probab=99.93  E-value=5.9e-26  Score=159.64  Aligned_cols=128  Identities=27%  Similarity=0.356  Sum_probs=114.1

Q ss_pred             cccc-ccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe-eEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHH
Q psy2929           2 KEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQ   77 (131)
Q Consensus         2 k~~~-~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~-~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~   77 (131)
                      |++. ....+..++....|+.+++++.|||||.+.++|..++. .+++|+|++||++.+.+++..  .|+++.+..|+.|
T Consensus        35 K~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q  114 (426)
T KOG0589|consen   35 KKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQ  114 (426)
T ss_pred             EEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHH
Confidence            4444 33456667789999999999999999999999998887 899999999999999998754  5999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++.|+.|||+++++| |+|+.|||++.++.++++|||++.    ..+.+.+..|||+
T Consensus       115 ~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~  171 (426)
T KOG0589|consen  115 ILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPY  171 (426)
T ss_pred             HHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCc
Confidence            999999999999999 999999999999999999999884    4457888899997

>KOG0586|consensus

Probab=99.93  E-value=3.3e-25  Score=159.09  Aligned_cols=127  Identities=26%  Similarity=0.386  Sum_probs=113.1

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      |.+.+. .+...++.+.+|+++|+.++||||++++.....+...|+||||+.+|.+++++...+..++.....+..|++.
T Consensus        87 K~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vs  166 (596)
T KOG0586|consen   87 KIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVS  166 (596)
T ss_pred             EEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHH
Confidence            444433 3555667799999999999999999999999999999999999999999999999988888999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      +++|||++.++| |||++|+|++.+.++||+|||+..   ......+++|+|
T Consensus       167 aveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsp  218 (596)
T KOG0586|consen  167 AVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSP  218 (596)
T ss_pred             HHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCC
Confidence            999999999999 999999999999999999999864   556666777765

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.93  E-value=6.2e-25  Score=152.26  Aligned_cols=107  Identities=22%  Similarity=0.241  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ......+.+|+.+++.++||||+.+++.+...+..|++|||+++++|.+.+...+.+++..+..++.|++.||.|+|++|
T Consensus        36 ~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  115 (323)
T cd05571          36 KDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD  115 (323)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34456678899999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       116 ivHrDlkp~NIll~~~~~~kl~DfG~a~  143 (323)
T cd05571         116 VVYRDLKLENLMLDKDGHIKITDFGLCK  143 (323)
T ss_pred             eEeCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            999 999999999999999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0694|consensus

Probab=99.93  E-value=5.3e-26  Score=164.88  Aligned_cols=128  Identities=19%  Similarity=0.274  Sum_probs=112.0

Q ss_pred             Cccccc--cccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHH
Q psy2929           1 MKEVQN--ALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~--~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~   77 (131)
                      ||++++  +...++.+....|.+++...+ ||.+++++.+|.++...|+||||+.||++.. +...+.|+++....++++
T Consensus       398 IK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAe  476 (694)
T KOG0694|consen  398 IKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAE  476 (694)
T ss_pred             EEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEE-EEecccccHHHHHHHHHH
Confidence            466663  346667788999999999885 9999999999999999999999999999433 334458999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++.||+|+|++||++ |||.+|||++.+|.+||+|||+..    .+..++++||||-
T Consensus       477 v~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpe  533 (694)
T KOG0694|consen  477 VVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPE  533 (694)
T ss_pred             HHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChh
Confidence            999999999999999 999999999999999999999985    5567889999984

>KOG0033|consensus

Probab=99.93  E-value=1.4e-25  Score=147.15  Aligned_cols=124  Identities=25%  Similarity=0.282  Sum_probs=110.5

Q ss_pred             ccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929           6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      +..+..+.+.+.+|+++.+.+.||||+++.+++...++.|+|+|+++|++|..-+-.+..+++.....+++|++.++.||
T Consensus        47 ~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yC  126 (355)
T KOG0033|consen   47 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYC  126 (355)
T ss_pred             hhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455678889999999999999999999999999999999999999999988777666788999999999999999999


Q ss_pred             Hhccccc-cccccceEEecC---Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          86 HSLMSVN-QHKPRYIAWKVG---SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~---~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      |.++|+| |+||+|+++...   .-+|++|||++-   .+..+.+++|||-
T Consensus       127 H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~  177 (355)
T KOG0033|consen  127 HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPG  177 (355)
T ss_pred             HhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCc
Confidence            9999999 999999999653   458999999873   7788889999984

>KOG0659|consensus

Probab=99.92  E-value=1.2e-25  Score=148.32  Aligned_cols=115  Identities=22%  Similarity=0.284  Sum_probs=102.6

Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHH
Q psy2929           1 MKEVQN-ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~-~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~   78 (131)
                      ||+++. ...+.......||+..|+.++||||+.+.++|.+.+...+|+||++. +|...++... .+++..+..|+.++
T Consensus        32 IKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~  110 (318)
T KOG0659|consen   32 IKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMT  110 (318)
T ss_pred             EEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHH
Confidence            355552 23344556688999999999999999999999999999999999977 9999998765 68999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+.|||++.+.| |+||.|+|++.+|.+|++|||++.
T Consensus       111 LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr  149 (318)
T KOG0659|consen  111 LKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLAR  149 (318)
T ss_pred             HHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchh
Confidence            99999999999999 999999999999999999999875

>KOG0577|consensus

Probab=99.92  E-value=9.1e-26  Score=162.52  Aligned_cols=122  Identities=20%  Similarity=0.247  Sum_probs=113.8

Q ss_pred             cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ..+...++.+..|+++|++++|||.+.+-++|..+...|+|||||-| +..+++.-.. ++.+..+..++.+.+.||.||
T Consensus        64 KQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYL  142 (948)
T KOG0577|consen   64 KQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYL  142 (948)
T ss_pred             cccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            45666788999999999999999999999999999999999999955 9999888654 799999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeeeccccccCCCCCCC
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPF  129 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~~~gtp~  129 (131)
                      |+.+.+| |||..|||++..|.+|++|||-+.-...+.+++||||
T Consensus       143 HS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy  187 (948)
T KOG0577|consen  143 HSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY  187 (948)
T ss_pred             HHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence            9999999 9999999999999999999999988888999999998

>KOG0580|consensus

Probab=99.92  E-value=2.5e-26  Score=149.46  Aligned_cols=126  Identities=22%  Similarity=0.316  Sum_probs=110.2

Q ss_pred             cccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHH--hccCCCHHHHHHHHHH
Q psy2929           2 KEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQ   77 (131)
Q Consensus         2 k~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~   77 (131)
                      |++.+.  ...+..+++.+|+++-+.++||||+++|++|.++...|+++||+..|++...+.  ....+++...+.++.|
T Consensus        53 KVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q  132 (281)
T KOG0580|consen   53 KVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQ  132 (281)
T ss_pred             eeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHH
Confidence            444432  344567779999999999999999999999999999999999999999999998  4447999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeee--eccccccCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI--ENRQVRSGNVNG  127 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~--~~~~~~~~~~gt  127 (131)
                      ++.|+.|||..+++| |+||+|+|++..+..|++|||-+  .+.....+.|||
T Consensus       133 ~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt  185 (281)
T KOG0580|consen  133 LANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGT  185 (281)
T ss_pred             HHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecc
Confidence            999999999999999 99999999999999999999854  456666666665

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.92  E-value=1.1e-24  Score=152.08  Aligned_cols=106  Identities=23%  Similarity=0.334  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++.+.+..|++|||+++|+|.+++.....+++.....++.|++.||.|+|++|+
T Consensus        73 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  152 (340)
T PTZ00426         73 KQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI  152 (340)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34566889999999999999999999999999999999999999999999988789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       153 vHrDLkp~NILl~~~~~ikL~DFG~a~  179 (340)
T PTZ00426        153 VYRDLKPENLLLDKDGFIKMTDFGFAK  179 (340)
T ss_pred             EccCCCHHHEEECCCCCEEEecCCCCe
Confidence            99 999999999999999999999875

>KOG0584|consensus

Probab=99.92  E-value=3.7e-25  Score=159.22  Aligned_cols=122  Identities=26%  Similarity=0.277  Sum_probs=110.1

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe--eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~--~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .+++..+++..|+.+|+.++||||+++|+++.+...  +-+++|.++.|+|..+.++.+..+...+..|++|++.||.||
T Consensus        80 q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yL  159 (632)
T KOG0584|consen   80 QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYL  159 (632)
T ss_pred             cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhh
Confidence            467788999999999999999999999999987655  788999999999999999999999999999999999999999


Q ss_pred             Hhc--cccc-cccccceEEec-CCeeeccceeeee--ccccccCCCCCCC
Q psy2929          86 HSL--MSVN-QHKPRYIAWKV-GSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        86 h~~--~~~h-dlk~~nili~~-~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      |++  +|+| |||.+||||+. -|.+||+|+|++.  ..+.+....|||-
T Consensus       160 Hs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPE  209 (632)
T KOG0584|consen  160 HSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPE  209 (632)
T ss_pred             hcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCcc
Confidence            998  8999 99999999975 5999999999986  4444555779984

>KOG0597|consensus

Probab=99.92  E-value=1.7e-25  Score=160.19  Aligned_cols=127  Identities=30%  Similarity=0.415  Sum_probs=113.3

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      |.+.+. ..+++...+++|+++++.++||||+.++++|+.....|+|.||+.| +|..++...+.++++.+..++.+++.
T Consensus        33 k~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVs  111 (808)
T KOG0597|consen   33 KFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVS  111 (808)
T ss_pred             EEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHH
Confidence            445443 3566888899999999999999999999999999999999999977 99999999989999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccc----cCCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVR----SGNVNGPF  129 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~----~~~~gtp~  129 (131)
                      ||.|+|+++++| |+||+|||++..+.+|++|||+++..+..    +..-|||+
T Consensus       112 aL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPl  165 (808)
T KOG0597|consen  112 ALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPL  165 (808)
T ss_pred             HHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCccc
Confidence            999999999999 99999999999999999999998755443    34457775

>KOG0594|consensus

Probab=99.92  E-value=4.9e-25  Score=149.73  Aligned_cols=109  Identities=23%  Similarity=0.321  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCC-ceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPN-IVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQI   78 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~-iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~   78 (131)
                      +.......||+.+++.++|+| |+.+++.+.+..      ..++++||... +|..+++...    ..+...+..++.|+
T Consensus        51 EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Ql  129 (323)
T KOG0594|consen   51 EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQL  129 (323)
T ss_pred             cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHH
Confidence            345667899999999999999 999999999887      78999999965 9999999765    57778999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccc
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQ  119 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~  119 (131)
                      +.|+.|||+++++| ||||+|||++..|.+|++|||++...+
T Consensus       130 l~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen  130 LRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFS  171 (323)
T ss_pred             HHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence            99999999999999 999999999999999999999886433

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.92  E-value=1.2e-24  Score=151.15  Aligned_cols=106  Identities=25%  Similarity=0.375  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+.+.+..|+++||+++++|.+.+...+.+++..+..++.|++.||.|+|++|+
T Consensus        60 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  139 (329)
T PTZ00263         60 KQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDI  139 (329)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34567889999999999999999999999999999999999999999999888789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.+|++|||++.
T Consensus       140 vH~dlkp~NIll~~~~~~kl~Dfg~~~  166 (329)
T PTZ00263        140 IYRDLKPENLLLDNKGHVKVTDFGFAK  166 (329)
T ss_pred             eecCCCHHHEEECCCCCEEEeeccCce
Confidence            99 999999999999999999999875

>KOG0610|consensus

Probab=99.92  E-value=7.8e-25  Score=151.52  Aligned_cols=115  Identities=27%  Similarity=0.349  Sum_probs=103.3

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVY   76 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~   76 (131)
                      ||++.+.  .+.+...+.+.|.++|+.+.||.++.||..|..+.+.+++||||+||+|..+..++.  .|++..++.++.
T Consensus       107 mKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaA  186 (459)
T KOG0610|consen  107 MKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAA  186 (459)
T ss_pred             EEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHH
Confidence            3555432  234566778899999999999999999999999999999999999999999998765  599999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +++.||+|||..||++ ||||+||||-.+|.+.++||-+.
T Consensus       187 Evl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS  226 (459)
T KOG0610|consen  187 EVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLS  226 (459)
T ss_pred             HHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecccc
Confidence            9999999999999999 99999999999999999999654

>KOG0585|consensus

Probab=99.92  E-value=4.3e-25  Score=155.17  Aligned_cols=118  Identities=25%  Similarity=0.326  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+..++|+.+|+++.|||||+|++...+.  +.+|||+||+..|.+...-.....+++.+.+.++++++.||+|||.+|
T Consensus       151 ~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg  230 (576)
T KOG0585|consen  151 PIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG  230 (576)
T ss_pred             cHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            346789999999999999999999999765  579999999998877664333323888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec---------cccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN---------RQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~---------~~~~~~~~gtp~  129 (131)
                      ++| ||||+|+|++.+|.+||+|||....         .......+|||-
T Consensus       231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPA  280 (576)
T KOG0585|consen  231 IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPA  280 (576)
T ss_pred             eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCcc
Confidence            999 9999999999999999999987642         222334677774

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.7e-24  Score=152.86  Aligned_cols=107  Identities=22%  Similarity=0.329  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+++++.++||||+++++++.+.+..|++|||+++|+|.+++...+.+++..+..++.|++.||.|+|+.|
T Consensus        42 ~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g  121 (377)
T cd05629          42 KDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG  121 (377)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34456788999999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       122 ivHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629         122 FIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             eeccCCCHHHEEECCCCCEEEeeccccc
Confidence            999 999999999999999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.92  E-value=2.6e-24  Score=149.23  Aligned_cols=107  Identities=21%  Similarity=0.248  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ......+.+|+.+++.++||||+++++.+...+..|++|||+++++|...+.....+++..+..++.|++.||.|+|++|
T Consensus        36 ~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  115 (323)
T cd05595          36 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  115 (323)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34456678899999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       116 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  143 (323)
T cd05595         116 VVYRDIKLENLMLDKDGHIKITDFGLCK  143 (323)
T ss_pred             eEecCCCHHHEEEcCCCCEEecccHHhc
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG1187|consensus

Probab=99.92  E-value=9e-25  Score=153.31  Aligned_cols=106  Identities=25%  Similarity=0.261  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc-
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSL-   88 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~-   88 (131)
                      ...|.+|+.++..++|||+++|.|+|.+.+ ..+||+||+++|+|.+.+....  .+++.....|+.+++.||.|||.. 
T Consensus       115 ~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~  194 (361)
T KOG1187|consen  115 EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC  194 (361)
T ss_pred             hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            344999999999999999999999999988 4999999999999999998755  789999999999999999999985 


Q ss_pred             --cccc-cccccceEEecCCeeeccceeeeecc
Q psy2929          89 --MSVN-QHKPRYIAWKVGSILAGGKLYFIENR  118 (131)
Q Consensus        89 --~~~h-dlk~~nili~~~~~~kl~df~~~~~~  118 (131)
                        .++| ||||+|||++.+...|++|||++...
T Consensus       195 ~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~  227 (361)
T KOG1187|consen  195 PPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG  227 (361)
T ss_pred             CCCEecCCCCHHHeeECCCCCEEccCccCcccC
Confidence              4999 99999999999999999999998533

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.92  E-value=4.6e-24  Score=148.27  Aligned_cols=107  Identities=25%  Similarity=0.264  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ......+.+|+.+++.++||||+++++.+...+..|+||||+++++|...+.....+++..+..++.|++.||.|||++|
T Consensus        36 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  115 (328)
T cd05593          36 KDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK  115 (328)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34556788899999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       116 ivHrDikp~NIll~~~~~~kL~DfG~~~  143 (328)
T cd05593         116 IVYRDLKLENLMLDKDGHIKITDFGLCK  143 (328)
T ss_pred             eEecccCHHHeEECCCCcEEEecCcCCc
Confidence            999 999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=2.7e-24  Score=151.20  Aligned_cols=106  Identities=20%  Similarity=0.265  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||+|+++++.+.+....|++|||+++|+|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi  122 (363)
T cd05628          43 EQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF  122 (363)
T ss_pred             hHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34566888999999999999999999999999999999999999999999888789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       123 vHrDlKp~NILi~~~~~vkL~DFGla~  149 (363)
T cd05628         123 IHRDIKPDNLLLDSKGHVKLSDFGLCT  149 (363)
T ss_pred             EecCCCHHHeEECCCCCEEEeeccCcc
Confidence            99 999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.5e-24  Score=147.32  Aligned_cols=107  Identities=19%  Similarity=0.252  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ......+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++...+.++......++.|++.||.|+|++|
T Consensus        34 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  113 (312)
T cd05585          34 RSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN  113 (312)
T ss_pred             hhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34556788899999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~  141 (312)
T cd05585         114 VIYRDLKPENILLDYQGHIALCDFGLCK  141 (312)
T ss_pred             eEeCCCCHHHeEECCCCcEEEEECcccc
Confidence            999 999999999999999999999865

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=5e-24  Score=148.19  Aligned_cols=105  Identities=20%  Similarity=0.273  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++...+.+++.....++.|++.||.|+|++|++
T Consensus        44 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iv  123 (333)
T cd05600          44 EVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYI  123 (333)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45668889999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.+|++|||++.
T Consensus       124 H~dlkp~Nil~~~~~~~kL~Dfg~a~  149 (333)
T cd05600         124 HRDLKPENFLIDASGHIKLTDFGLSK  149 (333)
T ss_pred             ccCCCHHHEEECCCCCEEEEeCcCCc
Confidence            9 999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-24  Score=148.55  Aligned_cols=106  Identities=30%  Similarity=0.382  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      +..+.+.+|+.+++.++||||+++++.+.+....|++|||+++++|.+++...+.+++.....++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  122 (291)
T cd05612          43 KQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEI  122 (291)
T ss_pred             HHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34566889999999999999999999999999999999999999999999888789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.+|++|||++.
T Consensus       123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~  149 (291)
T cd05612         123 VYRDLKPENILLDKEGHIKLTDFGFAK  149 (291)
T ss_pred             eecCCCHHHeEECCCCCEEEEecCcch
Confidence            99 999999999999999999999875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.4e-24  Score=150.54  Aligned_cols=106  Identities=21%  Similarity=0.325  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .....+.+|+.+++.++||||+++++.+.+.+..|++|||+++|+|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i  122 (364)
T cd05599          43 EQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY  122 (364)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            44566788999999999999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       123 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~  149 (364)
T cd05599         123 IHRDIKPDNLLLDAKGHIKLSDFGLCT  149 (364)
T ss_pred             EeccCCHHHeEECCCCCEEEeecccce
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=4.3e-24  Score=151.01  Aligned_cols=106  Identities=21%  Similarity=0.292  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+.+.+..|+||||+++|+|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~i  122 (382)
T cd05625          43 NQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGF  122 (382)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            44567889999999999999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       123 vHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625         123 IHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             ecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            99 999999999999999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.91  E-value=6.5e-24  Score=147.16  Aligned_cols=106  Identities=24%  Similarity=0.308  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .....+.+|+.+++.++||||+++++.+..++..|++|||+++++|.+.+...+.+.+.....++.|++.||.|+|++|+
T Consensus        42 ~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (323)
T cd05584          42 KDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI  121 (323)
T ss_pred             hhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34456788999999999999999999999999999999999999999999888788889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (323)
T cd05584         122 IYRDLKPENILLDAQGHVKLTDFGLCK  148 (323)
T ss_pred             ecCCCCHHHeEECCCCCEEEeeCcCCe
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.91  E-value=5.1e-24  Score=150.66  Aligned_cols=107  Identities=21%  Similarity=0.317  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++.+.+.+..|++|||+++|+|.+++.....+++.....++.|++.||.|+|+.|
T Consensus        42 ~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g  121 (381)
T cd05626          42 RNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG  121 (381)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34556788999999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       122 ivHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626         122 FIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             eeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            999 999999999999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.91  E-value=7.4e-24  Score=146.52  Aligned_cols=105  Identities=28%  Similarity=0.385  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|+.+++.++||||+++++.+.+.+..|+++||+++++|.+.+.....+++..+..++.|++.||.|+|+++++
T Consensus        41 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  120 (318)
T cd05582          41 DRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII  120 (318)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            44567789999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       121 H~dlkp~Nil~~~~~~~kL~Dfg~~~  146 (318)
T cd05582         121 YRDLKPENILLDEEGHIKLTDFGLSK  146 (318)
T ss_pred             cCCCCHHHeEECCCCcEEEeeccCCc
Confidence            9 999999999999999999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.91  E-value=9.4e-24  Score=146.75  Aligned_cols=106  Identities=21%  Similarity=0.321  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .....+.+|..+++.+ +||||+++++.+.+.+..|++|||+++++|..++...+.+++.....++.|++.||.|+|++|
T Consensus        37 ~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  116 (329)
T cd05588          37 EDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG  116 (329)
T ss_pred             hHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4456688899999988 699999999999999999999999999999999888778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       117 ivH~dlkp~Nili~~~~~~kL~Dfg~~~  144 (329)
T cd05588         117 IIYRDLKLDNVLLDAEGHIKLTDYGMCK  144 (329)
T ss_pred             eEecCCCHHHeEECCCCCEEECcCcccc
Confidence            999 999999999999999999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=5.4e-24  Score=150.19  Aligned_cols=104  Identities=21%  Similarity=0.302  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+.+..|++|||+++|+|.+++...+.+++..+..++.|++.||.|+|++|++
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv  123 (376)
T cd05598          44 QAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFI  123 (376)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            45668899999999999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      | ||||+|||++.++.++++|||++
T Consensus       124 HrDlkp~Nill~~~~~ikL~DFG~a  148 (376)
T cd05598         124 HRDIKPDNILIDRDGHIKLTDFGLC  148 (376)
T ss_pred             eCCCCHHHEEECCCCCEEEEeCCCC
Confidence            9 99999999999999999999985

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=1.4e-23  Score=152.27  Aligned_cols=108  Identities=26%  Similarity=0.396  Sum_probs=98.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +......+.+|+.+++.++||||+++++.+...+..|++|||+++|+|.+.+..    ..++++..+..++.|++.||.|
T Consensus       105 ~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  184 (478)
T PTZ00267        105 DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE  184 (478)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence            444556688899999999999999999999999999999999999999988753    2358889999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.+++| ||||+|||++.++.+|++|||++.
T Consensus       185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~  217 (478)
T PTZ00267        185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSK  217 (478)
T ss_pred             HHhCCEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence            99999999 999999999999999999999875

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.91  E-value=1.7e-23  Score=145.15  Aligned_cols=106  Identities=22%  Similarity=0.234  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-cc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-LM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~   89 (131)
                      .....+.+|+++++.++||||+.+++.+...+..|+||||+++++|...+.....+++..+..++.|++.||.|+|+ .|
T Consensus        37 ~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~  116 (325)
T cd05594          37 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN  116 (325)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            34566788999999999999999999999999999999999999999999887789999999999999999999997 79


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       117 ivHrDikp~NIll~~~~~~kL~Dfg~~~  144 (325)
T cd05594         117 VVYRDLKLENLMLDKDGHIKITDFGLCK  144 (325)
T ss_pred             EEecCCCCCeEEECCCCCEEEecCCCCe
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0579|consensus

Probab=99.91  E-value=1.3e-24  Score=157.98  Aligned_cols=124  Identities=21%  Similarity=0.377  Sum_probs=114.2

Q ss_pred             ccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHH
Q psy2929           6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ...++...+.+.-|+++|..|.||+|+.++++|..++.+|++.|||.||-+..++-.-+ ++.++.+..+++|++.||.|
T Consensus        66 etkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~  145 (1187)
T KOG0579|consen   66 ETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNW  145 (1187)
T ss_pred             cccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence            35567788999999999999999999999999999999999999999999988887644 79999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ||++.++| |+|..|||++.+|.++++|||...    ......++.||||
T Consensus       146 LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPY  195 (1187)
T KOG0579|consen  146 LHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPY  195 (1187)
T ss_pred             HhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcc
Confidence            99999999 999999999999999999999874    5667788999998

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.91  E-value=1.4e-23  Score=148.02  Aligned_cols=105  Identities=22%  Similarity=0.326  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+.++...|+|+||+++|+|.+++... .+++.....++.|++.||.|+|++++
T Consensus        85 ~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~I  163 (370)
T cd05621          85 SDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGL  163 (370)
T ss_pred             hhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34556789999999999999999999999999999999999999999998764 57888899999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       164 vHrDLKp~NILl~~~~~~kL~DFG~a~  190 (370)
T cd05621         164 IHRDVKPDNMLLDKHGHLKLADFGTCM  190 (370)
T ss_pred             EecCCCHHHEEECCCCCEEEEecccce
Confidence            99 999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.91  E-value=1.7e-23  Score=143.76  Aligned_cols=108  Identities=26%  Similarity=0.330  Sum_probs=97.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------------------CCCHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------------------KLSEE   69 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------------~~~~~   69 (131)
                      .......+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++....                   .++..
T Consensus        59 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (304)
T cd05096          59 NKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYS  138 (304)
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHH
Confidence            44456678999999999999999999999999999999999999999999986532                   24667


Q ss_pred             HHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          70 TCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+..++.|++.|+.|+|+.|++| ||||+|||++.++.+|++|||++.
T Consensus       139 ~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~  186 (304)
T cd05096         139 SLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSR  186 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccce
Confidence            78899999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0032|consensus

Probab=99.91  E-value=9.5e-24  Score=148.78  Aligned_cols=117  Identities=30%  Similarity=0.372  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+...+|+.+|+.+. ||||+.+++.|.+....++|||+++||.|.+.+... .+++.....++.|++.++.|||+.|+
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gv  156 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGV  156 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5678999999999998 999999999999999999999999999999999886 59999999999999999999999999


Q ss_pred             cc-cccccceEEecC----Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVG----SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        91 ~h-dlk~~nili~~~----~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +| |+||+|+|+...    +.+|++|||++.   ........+|||+
T Consensus       157 vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~  203 (382)
T KOG0032|consen  157 VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPE  203 (382)
T ss_pred             eeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCcc
Confidence            99 999999999764    469999999875   3345667788886

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.91  E-value=1.2e-23  Score=147.72  Aligned_cols=107  Identities=21%  Similarity=0.298  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|..++..++||+|+++++.+.+.+..|++|||+++|+|.+++...+.+++..+..++.|++.||.|+|++|
T Consensus        42 ~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          42 KEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33456788899999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       122 ivHrDLkp~NIli~~~~~vkL~DfG~~~  149 (360)
T cd05627         122 FIHRDIKPDNLLLDAKGHVKLSDFGLCT  149 (360)
T ss_pred             eEccCCCHHHEEECCCCCEEEeeccCCc
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0660|consensus

Probab=99.91  E-value=4.2e-24  Score=145.57  Aligned_cols=117  Identities=22%  Similarity=0.368  Sum_probs=102.6

Q ss_pred             Cccccccc-cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHH
Q psy2929           1 MKEVQNAL-DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI   74 (131)
Q Consensus         1 vk~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   74 (131)
                      ||++.+.. +.-..++..||+.+|+.++|+||+.+.+.+..+     ...|+|+|+++. +|.+.++....++..-+..+
T Consensus        52 IKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f  130 (359)
T KOG0660|consen   52 IKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYF  130 (359)
T ss_pred             hhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhh-HHHHHHHcCccccHHHHHHH
Confidence            34554333 455778899999999999999999999999762     358999999955 99999999877999999999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeecc
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENR  118 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~  118 (131)
                      +.|+++|+.|+|+.+++| |+||+|+|++.++..|++|||++...
T Consensus       131 ~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen  131 LYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             HHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence            999999999999999999 99999999999999999999998643

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.91  E-value=4.3e-23  Score=143.49  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=100.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .+...+.+.+|+++++.++||||+++++.+...+..+++|||+++++|.+++.....+++..+..++.|++.|+.|+|+.
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            44556779999999999999999999999999999999999999999999998877889999999999999999999986


Q ss_pred             -cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 -MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 -~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       +++| ||+|+||+++.++.++++|||++.
T Consensus       123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  152 (331)
T cd06649         123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (331)
T ss_pred             CCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence             6999 999999999999999999999764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0663|consensus

Probab=99.91  E-value=5e-24  Score=144.58  Aligned_cols=105  Identities=27%  Similarity=0.319  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..-...||+.+|..++|||||.+-+.....  +.+|+||||++. +|.++++... +|......+++.|++.|+.|+|.+
T Consensus       118 FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~  196 (419)
T KOG0663|consen  118 FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN  196 (419)
T ss_pred             CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc
Confidence            344568999999999999999998888644  579999999977 9999999876 799999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeeec
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      .++| |+||+|+|+...|.+|++|||++..
T Consensus       197 wilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  197 WILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             eeEecccchhheeeccCCcEEecccchhhh
Confidence            9999 9999999999999999999999864

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=2.2e-23  Score=143.18  Aligned_cols=104  Identities=24%  Similarity=0.304  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+.+|+.+++.++||||+++++++.++...++++||+. +++.+.+... +.+++..+..++.|++.||.|+|++|+
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  124 (303)
T cd07869          46 TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI  124 (303)
T ss_pred             cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34457789999999999999999999999999999999995 5888877654 468889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       125 vH~dlkp~Nill~~~~~~kl~Dfg~~~  151 (303)
T cd07869         125 LHRDLKPQNLLISDTGELKLADFGLAR  151 (303)
T ss_pred             ecCCCCHHHEEECCCCCEEECCCCcce
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.90  E-value=4.9e-23  Score=143.39  Aligned_cols=108  Identities=18%  Similarity=0.240  Sum_probs=100.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+++++.++||||+++++.+...+..++++||+++++|.+++...+.++...+..++.|++.++.|+|+.
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~  122 (333)
T cd06650          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  122 (333)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            44556778999999999999999999999999999999999999999999998877788999999999999999999985


Q ss_pred             -cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 -MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 -~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       +++| ||+|+|||++.++.+|++|||++.
T Consensus       123 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~  152 (333)
T cd06650         123 HKIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (333)
T ss_pred             CCEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence             7999 999999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.90  E-value=4.1e-23  Score=143.43  Aligned_cols=107  Identities=21%  Similarity=0.318  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|..+++.+ +||+|+.+++++...+..|++|||+++++|..++.....+++..+..++.|++.|+.|+|++
T Consensus        36 ~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~  115 (327)
T cd05617          36 DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER  115 (327)
T ss_pred             hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556688999999888 59999999999999999999999999999999988877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+|||++.++.+|++|||++.
T Consensus       116 ~ivHrDlkp~Nili~~~~~~kl~Dfg~~~  144 (327)
T cd05617         116 GIIYRDLKLDNVLLDADGHIKLTDYGMCK  144 (327)
T ss_pred             CeeccCCCHHHEEEeCCCCEEEeccccce
Confidence            9999 999999999999999999999765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.90  E-value=3.6e-23  Score=144.03  Aligned_cols=115  Identities=18%  Similarity=0.290  Sum_probs=96.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+ ..+++|||+++|+|.+++....               
T Consensus        43 K~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  122 (338)
T cd05102          43 KMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRG  122 (338)
T ss_pred             eccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhh
Confidence            4443333344566789999999999 7999999999887644 5789999999999999987531               


Q ss_pred             -----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhccccc-cccc
Q psy2929          65 -----------------------------------------------KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKP   96 (131)
Q Consensus        65 -----------------------------------------------~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~   96 (131)
                                                                     .++...+..++.|++.||.|+|++|++| ||||
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp  202 (338)
T cd05102         123 RFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAA  202 (338)
T ss_pred             hhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCcc
Confidence                                                           2566778889999999999999999999 9999


Q ss_pred             cceEEecCCeeeccceeeee
Q psy2929          97 RYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        97 ~nili~~~~~~kl~df~~~~  116 (131)
                      +|||++.++.+|++|||++.
T Consensus       203 ~Nil~~~~~~~kl~DfG~a~  222 (338)
T cd05102         203 RNILLSENNVVKICDFGLAR  222 (338)
T ss_pred             ceEEEcCCCcEEEeeccccc
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.90  E-value=2.9e-23  Score=141.73  Aligned_cols=104  Identities=25%  Similarity=0.338  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+.+|+.+++.++||||+++++.+.+.+..++++|++.+ +|.+.+...+ .++...+..++.|++.||.|+|++|+
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  124 (288)
T cd07871          46 APCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI  124 (288)
T ss_pred             cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            345678899999999999999999999999999999999975 9999887654 47888999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       125 vH~dlkp~Nil~~~~~~~kl~DfG~~~  151 (288)
T cd07871         125 LHRDLKPQNLLINEKGELKLADFGLAR  151 (288)
T ss_pred             ccCCCCHHHEEECCCCCEEECcCccee
Confidence            99 999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.90  E-value=3.4e-23  Score=143.40  Aligned_cols=104  Identities=26%  Similarity=0.348  Sum_probs=94.1

Q ss_pred             HHHHHHHHH-HHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+.+|.. +++.++||||+++++.+.+.+..|++|||+++++|...+.....+++..+..++.|++.||.|+|++|++
T Consensus        39 ~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iv  118 (321)
T cd05603          39 QNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNII  118 (321)
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            344555554 6788999999999999999999999999999999999888777889999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+||+++.++.+|++|||++.
T Consensus       119 H~Dlkp~NIll~~~~~~kl~Dfg~~~  144 (321)
T cd05603         119 YRDLKPENILLDSQGHVVLTDFGLCK  144 (321)
T ss_pred             eccCCHHHeEECCCCCEEEccCCCCc
Confidence            9 999999999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.90  E-value=4.5e-23  Score=145.47  Aligned_cols=104  Identities=21%  Similarity=0.297  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..|+++||+++|+|.+++... .+++.....++.|++.||.|+|++|++
T Consensus        86 ~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~iv  164 (370)
T cd05596          86 DSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFI  164 (370)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4455778999999999999999999999999999999999999999988764 678888999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.++.+|++|||++.
T Consensus       165 HrDLkp~NILl~~~~~~kL~DfG~~~  190 (370)
T cd05596         165 HRDVKPDNMLLDKSGHLKLADFGTCM  190 (370)
T ss_pred             ccCCCHHHEEEcCCCCEEEEecccee
Confidence            9 999999999999999999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.90  E-value=3.9e-23  Score=143.62  Aligned_cols=105  Identities=21%  Similarity=0.236  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++ ||+|+.+++.+...+..+++|||+++|+|.+.+.....+++..+..++.|++.||.|+|++|+
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  126 (332)
T cd05614          47 TVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI  126 (332)
T ss_pred             HHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4456788999999995 999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       127 vHrDlkp~Nili~~~~~~kl~DfG~~~  153 (332)
T cd05614         127 VYRDIKLENILLDSEGHVVLTDFGLSK  153 (332)
T ss_pred             EecCCCHHHeEECCCCCEEEeeCcCCc
Confidence            99 999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0614|consensus

Probab=99.90  E-value=3.6e-25  Score=156.99  Aligned_cols=122  Identities=19%  Similarity=0.213  Sum_probs=114.7

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .+.+..++...|-.+|..++.|.|+++|..|.++.+.|++||.|-||.++..+..++.|...+...++.+++.|++|||+
T Consensus       459 VdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~  538 (732)
T KOG0614|consen  459 VDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHR  538 (732)
T ss_pred             cchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHh
Confidence            46678888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +|+++ |+||+|++++.+|.+|+.|||++.   .+..+-++||||-
T Consensus       539 k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpE  584 (732)
T KOG0614|consen  539 KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPE  584 (732)
T ss_pred             cCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcc
Confidence            99999 999999999999999999999985   6666777899983

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.90  E-value=5.3e-23  Score=143.02  Aligned_cols=107  Identities=22%  Similarity=0.330  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ......+.+|..++..+ +||||+++++++...+..|+++||+++++|...+.....+++.....++.|++.|+.|+|++
T Consensus        36 ~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~  115 (329)
T cd05618          36 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER  115 (329)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556678888888876 79999999999999999999999999999999988877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||||+||+++.++.++++|||++.
T Consensus       116 ~ivH~Dikp~Nili~~~~~~kL~DfG~~~  144 (329)
T cd05618         116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCK  144 (329)
T ss_pred             CeeeCCCCHHHEEECCCCCEEEeeCCccc
Confidence            9999 999999999999999999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.90  E-value=5.2e-23  Score=145.20  Aligned_cols=105  Identities=21%  Similarity=0.327  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|..+++.++||||+++++.+.+.+..|++|||+++|+|.+++... .++......++.|++.||.|+|++|+
T Consensus        85 ~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i  163 (371)
T cd05622          85 SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGF  163 (371)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            34556788999999999999999999999999999999999999999998764 57888889999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       164 vHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         164 IHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            99 999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.90  E-value=5.1e-23  Score=142.78  Aligned_cols=105  Identities=27%  Similarity=0.362  Sum_probs=94.8

Q ss_pred             HHHHHHHHHH-HHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+..|.. +++.++||||+++++.+...+..|++|||+++++|...+.....+++..+..++.|++.||.|+|++|+
T Consensus        38 ~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi  117 (325)
T cd05604          38 EQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI  117 (325)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3344555554 567889999999999999999999999999999999998887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       118 vH~Dlkp~NIll~~~~~~kL~DfG~~~  144 (325)
T cd05604         118 VYRDLKPENILLDSQGHVVLTDFGLCK  144 (325)
T ss_pred             eecCCCHHHeEECCCCCEEEeecCCcc
Confidence            99 999999999999999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0608|consensus

Probab=99.90  E-value=2.2e-23  Score=151.35  Aligned_cols=106  Identities=21%  Similarity=0.295  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ........|-.+|..-..+.||+||-+|.+++.+|+||||++||++.+++-+.+-|.+...+.++.++.+|+++.|..|+
T Consensus       671 nQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGF  750 (1034)
T KOG0608|consen  671 NQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGF  750 (1034)
T ss_pred             hhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccc
Confidence            34455677889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+||||+.+|.+|+.|||+..
T Consensus       751 IHRDiKPDNILIDrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  751 IHRDIKPDNILIDRDGHIKLTDFGLCT  777 (1034)
T ss_pred             eecccCccceEEccCCceeeeeccccc
Confidence            99 999999999999999999999874

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=7.7e-23  Score=138.14  Aligned_cols=109  Identities=17%  Similarity=0.220  Sum_probs=99.3

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .+......+.+|+..++.++||||+++++.+..++..+++|||+++++|.+++... ..+++..+..++.|++.|+.|+|
T Consensus        45 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH  124 (266)
T cd05064          45 CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS  124 (266)
T ss_pred             CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34455667899999999999999999999999999999999999999999998764 46889999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| |++|+||+++.++.++++|||...
T Consensus       125 ~~~iiH~dikp~nili~~~~~~~l~dfg~~~  155 (266)
T cd05064         125 EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ  155 (266)
T ss_pred             HCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence            999999 999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.90  E-value=7.1e-23  Score=138.29  Aligned_cols=108  Identities=18%  Similarity=0.249  Sum_probs=96.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----CCCHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----KLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~l~   83 (131)
                      .......+.+|+..++.++||||+++++.+......|+++||+++|+|.+++....     ..+......++.|++.|+.
T Consensus        35 ~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~  114 (269)
T cd05042          35 TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLL  114 (269)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHH
Confidence            34455668899999999999999999999999999999999999999999997643     2456778899999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|+++++| ||||+|||++.++.+|++|||++.
T Consensus       115 ~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  148 (269)
T cd05042         115 WLHQADFIHSDLALRNCQLTADLSVKIGDYGLAL  148 (269)
T ss_pred             HHHhcCEecccccHhheEecCCCcEEEecccccc
Confidence            999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0194|consensus

Probab=99.90  E-value=5.7e-23  Score=146.76  Aligned_cols=112  Identities=22%  Similarity=0.370  Sum_probs=104.0

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ........+.+|.++|++++||||+++||....+.-++++||++.||+|.+++...+ .++......++.+.+.||+|||
T Consensus       200 ~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh  279 (474)
T KOG0194|consen  200 LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH  279 (474)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH
Confidence            345677889999999999999999999999999999999999999999999999876 4899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeeeccc
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQ  119 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~  119 (131)
                      +++++| ||...|+|++..+.+|++|||++....
T Consensus       280 ~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  280 SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             HCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            999999 999999999999999999999976543

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.90  E-value=8.3e-23  Score=141.49  Aligned_cols=106  Identities=22%  Similarity=0.286  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+..|.++++.. +||||+.+++.+.+.+..|+||||+++++|...+.....+++.....++.|++.||.|+|++|
T Consensus        37 ~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  116 (321)
T cd05591          37 DDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG  116 (321)
T ss_pred             hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3455677888888866 799999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+||+++.++.++++|||++.
T Consensus       117 ivHrDikp~Nill~~~~~~kL~Dfg~~~  144 (321)
T cd05591         117 VIYRDLKLDNILLDAEGHCKLADFGMCK  144 (321)
T ss_pred             eeccCCCHHHeEECCCCCEEEeecccce
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.90  E-value=9e-23  Score=141.53  Aligned_cols=102  Identities=28%  Similarity=0.343  Sum_probs=92.8

Q ss_pred             HHHHHH-HHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          15 YFANEV-DNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        15 ~~~~e~-~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      .+.+|. .+++.++||||+++++.+...+..|+++||+++++|.+.+.....+.+..+..++.|++.||.|+|++|++| 
T Consensus        41 ~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr  120 (325)
T cd05602          41 HIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR  120 (325)
T ss_pred             HHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence            344444 456788999999999999999999999999999999999988778889999999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeee
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||||+|||++.++.++++|||++.
T Consensus       121 Dlkp~Nili~~~~~~kl~DfG~a~  144 (325)
T cd05602         121 DLKPENILLDSQGHIVLTDFGLCK  144 (325)
T ss_pred             CCCHHHeEECCCCCEEEccCCCCc
Confidence            999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.1e-23  Score=144.78  Aligned_cols=106  Identities=25%  Similarity=0.342  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+.+.+..|++|||+++++|.+++...+.++...+..++.|++.||.|+|+.|+
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  122 (350)
T cd05573          43 NQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGF  122 (350)
T ss_pred             cHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45567889999999999999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       123 iH~Dlkp~NIll~~~~~~kL~Dfg~~~  149 (350)
T cd05573         123 IHRDIKPDNILIDADGHIKLADFGLCK  149 (350)
T ss_pred             eccCCCHHHeEECCCCCEEeecCCCCc
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.90  E-value=6.5e-23  Score=142.39  Aligned_cols=106  Identities=24%  Similarity=0.336  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++||||+.+++.+.+.+..|++|||+++++|.+++... ..+++..+..++.|++.||.|+|+.+
T Consensus        43 ~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~  122 (330)
T cd05601          43 ETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG  122 (330)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35566889999999999999999999999999999999999999999999876 57899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.+|++|||++.
T Consensus       123 i~H~Dlkp~NIll~~~~~~kL~Dfg~a~  150 (330)
T cd05601         123 YVHRDIKPENVLIDRTGHIKLADFGSAA  150 (330)
T ss_pred             eEcccCchHheEECCCCCEEeccCCCCe
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.90  E-value=1.2e-22  Score=140.89  Aligned_cols=103  Identities=29%  Similarity=0.378  Sum_probs=93.6

Q ss_pred             HHHHHHHH-HHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      +.+.+|.. +++.++||||+++++.+...+..|++|||+++++|..++.....+++..+..++.|++.||.|+|++|++|
T Consensus        40 ~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH  119 (323)
T cd05575          40 KHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIY  119 (323)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            34444544 56789999999999999999999999999999999999988778999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||+|+|||++.++.+|++|||++.
T Consensus       120 ~dikp~NIll~~~~~~kl~Dfg~~~  144 (323)
T cd05575         120 RDLKPENILLDSQGHVVLTDFGLCK  144 (323)
T ss_pred             CCCCHHHeEECCCCcEEEeccCCCc
Confidence             999999999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.90  E-value=6.7e-23  Score=141.99  Aligned_cols=106  Identities=20%  Similarity=0.279  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+..|..+++.. +||||+++++++...+..|++|||+++++|.+.+.....+++.....++.|++.||.|+|++|
T Consensus        37 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~  116 (320)
T cd05590          37 DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG  116 (320)
T ss_pred             cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3455677888888876 699999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       117 ivH~dlkp~NIli~~~~~~kL~DfG~~~  144 (320)
T cd05590         117 IIYRDLKLDNVLLDHEGHCKLADFGMCK  144 (320)
T ss_pred             eEeCCCCHHHeEECCCCcEEEeeCCCCe
Confidence            999 999999999999999999999765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.90  E-value=8.1e-23  Score=141.36  Aligned_cols=105  Identities=18%  Similarity=0.234  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+....|..++... +||+|+++++.+.+.+..|++|||+.+++|...+.....++......++.|++.|+.|+|++|+
T Consensus        38 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  117 (316)
T cd05620          38 DVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI  117 (316)
T ss_pred             hHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            445567788888754 8999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+||+++.++.++++|||++.
T Consensus       118 vHrDlkp~Nil~~~~~~~kl~Dfg~~~  144 (316)
T cd05620         118 IYRDLKLDNVMLDRDGHIKIADFGMCK  144 (316)
T ss_pred             EecCCCHHHeEECCCCCEEeCccCCCe
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0607|consensus

Probab=99.90  E-value=1.4e-23  Score=142.11  Aligned_cols=115  Identities=23%  Similarity=0.288  Sum_probs=102.6

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      ||++.++ ....+.+..||++++.++. |+||+++.++|+++...|||||-+.||++.+.+..+..|++.....+++++.
T Consensus       108 VKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia  186 (463)
T KOG0607|consen  108 VKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIA  186 (463)
T ss_pred             hhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHH
Confidence            4555443 5556788999999999995 9999999999999999999999999999999999998999999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCC---eeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGS---ILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~---~~kl~df~~~~  116 (131)
                      .||.+||.+||.| |+||+|||...-+   -+||+||-+..
T Consensus       187 ~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  187 SALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             HHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence            9999999999999 9999999997654   47999996553

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.1e-22  Score=141.59  Aligned_cols=106  Identities=20%  Similarity=0.269  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|..+++.++||||+.+++.+.+.+..|+++||+++++|.+++.. ...+++..+..++.|++.||.|+|+++
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          43 AETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456688899999999999999999999999999999999999999999976 346889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       123 ivH~dlkp~Nill~~~~~~kl~Dfg~~~  150 (331)
T cd05597         123 YVHRDIKPDNVLLDKNGHIRLADFGSCL  150 (331)
T ss_pred             eEECCCCHHHEEECCCCCEEEEECCcee
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.89  E-value=1.1e-22  Score=140.68  Aligned_cols=106  Identities=19%  Similarity=0.294  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+....|..++... .||||+++++.+...+..|++|||+++++|...+.....+++..+..++.|++.||.|+|+++
T Consensus        37 ~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05592          37 DDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG  116 (316)
T ss_pred             hhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3445556677777654 799999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.+|++|||++.
T Consensus       117 ivH~dlkp~Nill~~~~~~kL~Dfg~a~  144 (316)
T cd05592         117 IIYRDLKLDNVLLDKDGHIKIADFGMCK  144 (316)
T ss_pred             EEeCCCCHHHeEECCCCCEEEccCcCCe
Confidence            999 999999999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG1026|consensus

Probab=99.89  E-value=7.8e-23  Score=151.27  Aligned_cols=117  Identities=26%  Similarity=0.341  Sum_probs=107.6

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------C----C
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------K----L   66 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~----~   66 (131)
                      ||.++...+.+.++.|+||++++..+.|||||+++|.+...+-+++|+||+..|+|.+++..+.          .    +
T Consensus       521 VK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L  600 (774)
T KOG1026|consen  521 VKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPL  600 (774)
T ss_pred             HhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCC
Confidence            5777777778889999999999999999999999999999999999999999999999997543          1    5


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          67 SEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +....+.++.|++.|++||.++.++| ||...|.||+.+-.+||+|||+..+
T Consensus       601 ~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRd  652 (774)
T KOG1026|consen  601 STSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRD  652 (774)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchh
Confidence            67789999999999999999999999 9999999999999999999998753

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=1.5e-22  Score=135.42  Aligned_cols=110  Identities=26%  Similarity=0.327  Sum_probs=100.1

Q ss_pred             cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .........+.+|+++++.++||||+++++.+......++++||+++++|.+++.... .+++..++.++.|++.||.|+
T Consensus        31 ~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l  110 (252)
T cd05084          31 TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYL  110 (252)
T ss_pred             cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3445566779999999999999999999999999999999999999999999987644 578899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| |++|+||+++.++.++++|||.+.
T Consensus       111 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  142 (252)
T cd05084         111 ESKHCIHRDLAARNCLVTEKNVLKISDFGMSR  142 (252)
T ss_pred             HhCCccccccchheEEEcCCCcEEECccccCc
Confidence            9999999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0690|consensus

Probab=99.89  E-value=4.7e-24  Score=144.90  Aligned_cols=129  Identities=20%  Similarity=0.211  Sum_probs=115.9

Q ss_pred             Cccccc--cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQN--ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~--~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||++++  +...........|-++|+.++||.+..+--+|...+.+++||||+.||.|.-++.+...|+++..+.+...+
T Consensus       198 iKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEI  277 (516)
T KOG0690|consen  198 IKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEI  277 (516)
T ss_pred             hhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHH
Confidence            355553  235556777889999999999999999999999999999999999999999999998899999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      +.||.|+|++++++ |+|.+|+|++.+|.+|++|||+..    .+....++||||-
T Consensus       278 vsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPE  333 (516)
T KOG0690|consen  278 VSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPE  333 (516)
T ss_pred             HHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChh
Confidence            99999999999999 999999999999999999999975    5566678899983

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.89  E-value=2.9e-22  Score=138.05  Aligned_cols=108  Identities=19%  Similarity=0.237  Sum_probs=100.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-   87 (131)
                      .....+.+.+|+++++.++||||+++++.+..++..++++||+++++|.+++.....+++..+..++.|++.++.|+|+ 
T Consensus        39 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  118 (308)
T cd06615          39 KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK  118 (308)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            3445667889999999999999999999999999999999999999999999887788999999999999999999998 


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++| |++|+||+++.++.++++|||++.
T Consensus       119 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  148 (308)
T cd06615         119 HKIMHRDVKPSNILVNSRGEIKLCDFGVSG  148 (308)
T ss_pred             CCEEECCCChHHEEEecCCcEEEccCCCcc
Confidence            59999 999999999999999999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=8.1e-23  Score=144.40  Aligned_cols=115  Identities=23%  Similarity=0.247  Sum_probs=98.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |+++........+.+.+|+.+++.+ +||||+++++++...+..+++|||+++|+|.+++....                
T Consensus        71 K~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  150 (375)
T cd05104          71 KMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAAL  150 (375)
T ss_pred             EeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHH
Confidence            3343333344567788999999999 79999999999999999999999999999999886421                


Q ss_pred             -----------------------------------------------------------CCCHHHHHHHHHHHHHHHHHH
Q psy2929          65 -----------------------------------------------------------KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        65 -----------------------------------------------------------~~~~~~~~~~~~~~~~~l~~l   85 (131)
                                                                                 .++...+..++.|++.|+.|+
T Consensus       151 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l  230 (375)
T cd05104         151 YKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFL  230 (375)
T ss_pred             HHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                                                       256677888999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+++++| ||||+|||++.++.++++|||++.
T Consensus       231 H~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~  262 (375)
T cd05104         231 ASKNCIHRDLAARNILLTHGRITKICDFGLAR  262 (375)
T ss_pred             HHCCeeccCCchhhEEEECCCcEEEecCccce
Confidence            9999999 999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.89  E-value=1.2e-22  Score=143.46  Aligned_cols=115  Identities=19%  Similarity=0.243  Sum_probs=99.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+..+++|||+++|+|.+++....                
T Consensus        74 K~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  153 (374)
T cd05106          74 KMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISET  153 (374)
T ss_pred             EeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccc
Confidence            3343333444567788999999999 79999999999999999999999999999999885421                


Q ss_pred             ------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          65 ------------------------------------------------------KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        65 ------------------------------------------------------~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                                                                            .++...+..++.|++.||.|+|++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gi  233 (374)
T cd05106         154 SSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNC  233 (374)
T ss_pred             cccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCE
Confidence                                                                  25667788999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       234 iHrDLkp~Nil~~~~~~~kL~DfGla~  260 (374)
T cd05106         234 IHRDVAARNVLLTDGRVAKICDFGLAR  260 (374)
T ss_pred             EeccCchheEEEeCCCeEEEeeceeee
Confidence            99 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.89  E-value=1.5e-22  Score=140.03  Aligned_cols=105  Identities=25%  Similarity=0.335  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+....|..+++.. +||||+++++.+.+.+..|++|||+++|+|.+.+.....++......++.|++.|+.|+|++|+
T Consensus        38 ~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  117 (316)
T cd05619          38 DVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI  117 (316)
T ss_pred             hHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            345566778888764 8999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.++++|||++.
T Consensus       118 vHrdikp~Nil~~~~~~~kl~Dfg~~~  144 (316)
T cd05619         118 VYRDLKLDNILLDTDGHIKIADFGMCK  144 (316)
T ss_pred             EeCCCCHHHEEECCCCCEEEccCCcce
Confidence            99 999999999999999999999765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG4236|consensus

Probab=99.89  E-value=7e-23  Score=146.36  Aligned_cols=129  Identities=25%  Similarity=0.339  Sum_probs=109.4

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~   78 (131)
                      ||++.+. +..+....+++|+.+|+.+.||.||.+.-.|+..+..|.|||-+.|.-|..++... +.+++.....++.|+
T Consensus       594 vKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQI  673 (888)
T KOG4236|consen  594 VKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQI  673 (888)
T ss_pred             eeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHH
Confidence            4666643 34555678999999999999999999999999999999999999664555555543 468999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecC---Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVG---SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~---~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +.||+|||.++|+| |+||+|+|+...   ..+|++|||+++   ..+...+.+|||-
T Consensus       674 L~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPA  731 (888)
T KOG4236|consen  674 LVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPA  731 (888)
T ss_pred             HHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCcc
Confidence            99999999999999 999999999754   568999999875   7778888899983

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.89  E-value=1.8e-22  Score=140.46  Aligned_cols=106  Identities=19%  Similarity=0.273  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|..++..++|++|+.+++.+.+.+..|++|||+++|+|.+++.. ...+++.....++.|++.||.|+|++|
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~  122 (331)
T cd05624          43 AETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH  122 (331)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3455678899999999999999999999999999999999999999999987 357889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       123 iiHrDlkp~Nill~~~~~~kl~DfG~a~  150 (331)
T cd05624         123 YVHRDIKPDNVLLDMNGHIRLADFGSCL  150 (331)
T ss_pred             eeeccCchHHEEEcCCCCEEEEecccee
Confidence            999 999999999999999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=1.2e-22  Score=136.94  Aligned_cols=117  Identities=29%  Similarity=0.422  Sum_probs=100.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~   79 (131)
                      |.++.....+..+.+.+|++.++.++||||+++++.+...+..++++||+++|+|.+++...  ..++......++.|++
T Consensus        34 k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~  113 (259)
T PF07714_consen   34 KILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIA  113 (259)
T ss_dssp             EEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHH
T ss_pred             EEeccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            44433345556788999999999999999999999999888899999999999999999986  5789999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeeecc
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENR  118 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~  118 (131)
                      .||.|+|+++++| +|+++||+++.++.+|++|||+....
T Consensus       114 ~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  114 EALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             HHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999 99999999999999999999876543

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.89  E-value=2e-22  Score=139.47  Aligned_cols=106  Identities=21%  Similarity=0.302  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .....+.+|..+++.+ +||||+++++.+.+.+..|++|||+++++|...+...+.+++..+..++.|++.||.|+|+++
T Consensus        37 ~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  116 (318)
T cd05570          37 DDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG  116 (318)
T ss_pred             hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3455677888899887 699999999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       117 ivH~dlkp~Nill~~~~~~kl~Dfg~~~  144 (318)
T cd05570         117 IIYRDLKLDNVLLDSEGHIKIADFGMCK  144 (318)
T ss_pred             eEccCCCHHHeEECCCCcEEecccCCCe
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.89  E-value=2.5e-22  Score=137.01  Aligned_cols=105  Identities=21%  Similarity=0.177  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+|+.+++.++|++++.+++.+.+.+..++++||+++|+|.+.+....  .+++.....++.|++.|+.|+|+.+
T Consensus        43 ~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05631          43 GEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER  122 (285)
T ss_pred             hHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34457889999999999999999999999999999999999999988876432  5888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.++++|||++.
T Consensus       123 iiH~dikp~Nill~~~~~~kl~Dfg~~~  150 (285)
T cd05631         123 IVYRDLKPENILLDDRGHIRISDLGLAV  150 (285)
T ss_pred             EEeCCCCHHHEEECCCCCEEEeeCCCcE
Confidence            999 999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.89  E-value=1.7e-22  Score=141.65  Aligned_cols=111  Identities=21%  Similarity=0.313  Sum_probs=95.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMA   81 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (131)
                      |++.........+.+.+|+.+++.++|+||+++++.+...+..++++||+++++|...    ....+..+..++.|++.|
T Consensus       105 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~a  180 (353)
T PLN00034        105 KVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSG  180 (353)
T ss_pred             EEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHH
Confidence            3333333455567789999999999999999999999999999999999999988542    235667788899999999


Q ss_pred             HHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |.|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       181 L~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~  216 (353)
T PLN00034        181 IAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSR  216 (353)
T ss_pred             HHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccce
Confidence            99999999999 999999999999999999999865

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.89  E-value=3.7e-22  Score=135.61  Aligned_cols=108  Identities=24%  Similarity=0.288  Sum_probs=98.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------------cCCCHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------VKLSEETCK   72 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------------~~~~~~~~~   72 (131)
                      .....+.+.+|+.+++.++||||+++++.+......++++||+++++|.+++...                ..++...+.
T Consensus        48 ~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  127 (283)
T cd05048          48 EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL  127 (283)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHH
Confidence            4455667899999999999999999999999888999999999999999999764                246778889


Q ss_pred             HHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          73 CIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++.|++.|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       128 ~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~  172 (283)
T cd05048         128 HIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSR  172 (283)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCccee
Confidence            99999999999999999999 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.89  E-value=2e-22  Score=139.78  Aligned_cols=104  Identities=22%  Similarity=0.292  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHH---HcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNL---KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l---~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|.+++   +.++||||+++++++.+.+..|+||||+++++|...+.. +.+++.....++.|++.|+.|+|++
T Consensus        42 ~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05589          42 EVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHEN  120 (324)
T ss_pred             HHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            445677777665   456799999999999999999999999999999888765 4789999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.+|++|||++.
T Consensus       121 ~ivHrdlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05589         121 KIVYRDLKLDNLLLDTEGFVKIADFGLCK  149 (324)
T ss_pred             CeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence            9999 999999999999999999999764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.89  E-value=2.5e-22  Score=139.24  Aligned_cols=107  Identities=21%  Similarity=0.259  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHHHHcCCC-CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+..|.++++.+.| ++|+.+++.+...+..|++|||+++++|.+.+.....+++.....++.|++.||.|+|++
T Consensus        41 ~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05587          41 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK  120 (324)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3455677889999999975 568889999999999999999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++.++.++++|||++.
T Consensus       121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05587         121 GIIYRDLKLDNVMLDAEGHIKIADFGMCK  149 (324)
T ss_pred             CeEecCCCHHHeEEcCCCCEEEeecCcce
Confidence            9999 999999999999999999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.89  E-value=3.2e-22  Score=135.07  Aligned_cols=108  Identities=19%  Similarity=0.273  Sum_probs=98.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++.+..++..|+++||+++++|.+++.... .++...+..++.|++.|+.++|+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  124 (267)
T cd05066          45 TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD  124 (267)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34456778999999999999999999999999999999999999999999998653 57889999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| |++|+||+++.++.++++|||.+.
T Consensus       125 ~~i~h~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd05066         125 MGYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (267)
T ss_pred             CCEeehhhchhcEEECCCCeEEeCCCCccc
Confidence            99999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG4250|consensus

Probab=99.89  E-value=4e-23  Score=150.54  Aligned_cols=127  Identities=24%  Similarity=0.300  Sum_probs=107.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhcc---CCCHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACV---KLSEETCK   72 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~   72 (131)
                      |.+++....+..+++-+|+++|++++|||||++++.-.+..      .-.++|||+.||+|...+.+..   ++++..++
T Consensus        44 K~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l  123 (732)
T KOG4250|consen   44 KTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFL  123 (732)
T ss_pred             HhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHH
Confidence            44554456677888999999999999999999998876543      3578999999999999998654   69999999


Q ss_pred             HHHHHHHHHHHHHHhccccc-cccccceEEecC--C--eeeccceeeee---ccccccCCCCCC
Q psy2929          73 CIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVG--S--ILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~--~--~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      .++.++..||.|||++||+| ||||.||++-..  |  -.|++|||.++   ..+...+.+||+
T Consensus       124 ~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~  187 (732)
T KOG4250|consen  124 DLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTE  187 (732)
T ss_pred             HHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCch
Confidence            99999999999999999999 999999999643  3  47999999885   555666777775

>KOG0193|consensus

Probab=99.89  E-value=4.4e-23  Score=148.39  Aligned_cols=122  Identities=22%  Similarity=0.257  Sum_probs=109.5

Q ss_pred             Ccccc-ccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHH
Q psy2929           1 MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~-~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~   78 (131)
                      ||+++ ....++..+.|++|+.+++.-+|.||+-+.|++..+.. .+|+.+++|.+|..+++... .|....+..|+.|+
T Consensus       419 VK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQi  497 (678)
T KOG0193|consen  419 VKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQI  497 (678)
T ss_pred             EEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHH
Confidence            46665 33467789999999999999999999999999988776 89999999999999998544 69999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccccC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSG  123 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~  123 (131)
                      +.|+.|||+++|+| |+|..|||+.+++.+||+|||++.....+.+
T Consensus       498 aqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g  543 (678)
T KOG0193|consen  498 AQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG  543 (678)
T ss_pred             HHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence            99999999999999 9999999999999999999999987777644

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=4e-22  Score=136.20  Aligned_cols=109  Identities=28%  Similarity=0.320  Sum_probs=100.1

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----------CCCHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----------KLSEETCKCIVY   76 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~   76 (131)
                      ......+.+.+|+++++.++|||++++++.+...+..++++|++++++|.+++....           .++...++.++.
T Consensus        58 ~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (296)
T cd05051          58 ASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMAT  137 (296)
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHH
Confidence            344566788999999999999999999999999899999999999999999998755           578899999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       138 ~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  178 (296)
T cd05051         138 QIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             HHHHHHHHHHHcCccccccchhceeecCCCceEEcccccee
Confidence            9999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG4717|consensus

Probab=99.89  E-value=1.2e-22  Score=144.80  Aligned_cols=127  Identities=28%  Similarity=0.366  Sum_probs=110.6

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~   78 (131)
                      ||++.+. .+......+..|++-|+.+.|||||++|+....+..+||+.|.=.+|+|.+++-++. ++.++....+.+|+
T Consensus        48 VKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI  127 (864)
T KOG4717|consen   48 VKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQI  127 (864)
T ss_pred             EEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHH
Confidence            3555543 355566778899999999999999999999999999999999999999999998765 69999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEec-CCeeeccceeeee---ccccccCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE---NRQVRSGNVNG  127 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~-~~~~kl~df~~~~---~~~~~~~~~gt  127 (131)
                      +.|+.|||..+++| |+||+|+.+.. -|-+|+.||||.+   ++....+.||+
T Consensus       128 ~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGS  181 (864)
T KOG4717|consen  128 VHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGS  181 (864)
T ss_pred             HHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccch
Confidence            99999999999999 99999998875 5899999999986   66666666665

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=3.3e-22  Score=142.05  Aligned_cols=103  Identities=20%  Similarity=0.195  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++||||+++++.+......++++|++. +++..++.....++...++.++.|++.||.|+|++|++|
T Consensus       127 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvH  205 (391)
T PHA03212        127 RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIH  205 (391)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            4457899999999999999999999999999999999985 589988887778899999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||||+|||++..+.++++|||++.
T Consensus       206 rDiKP~NIll~~~~~vkL~DFG~a~  230 (391)
T PHA03212        206 RDIKAENIFINHPGDVCLGDFGAAC  230 (391)
T ss_pred             CCCChHhEEEcCCCCEEEEeCCccc
Confidence             999999999999999999999864

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.89  E-value=4.5e-22  Score=138.46  Aligned_cols=105  Identities=22%  Similarity=0.307  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|..++..++|++|+.+++.+.+.+..|++|||+++|+|.+++... ..++......++.|++.|+.|+|+.++
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  123 (332)
T cd05623          44 ETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY  123 (332)
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3445788999999999999999999999999999999999999999999863 468899999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       124 iHrDlkp~Nili~~~~~~kL~DfG~a~  150 (332)
T cd05623         124 VHRDIKPDNILMDMNGHIRLADFGSCL  150 (332)
T ss_pred             EecCCCHHHEEECCCCCEEEeecchhe
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.89  E-value=3e-22  Score=137.68  Aligned_cols=108  Identities=21%  Similarity=0.327  Sum_probs=97.7

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~   71 (131)
                      .....+.+.+|+.++..+ +||||+++++.+...+..|+++||+++++|.+++....                .++...+
T Consensus        47 ~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  126 (303)
T cd05088          47 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL  126 (303)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHH
Confidence            344556788999999999 79999999999999999999999999999999997542                3678889


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|++|++| ||+|+|||++.++.++++|||+..
T Consensus       127 ~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         127 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCc
Confidence            999999999999999999999 999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.89  E-value=4.8e-22  Score=135.27  Aligned_cols=105  Identities=19%  Similarity=0.148  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+..|+.+++.++||||+.+.+.+..+...+++|||+++++|...+..    ...+++..+..++.|++.|+.|+|+
T Consensus        36 ~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~  115 (280)
T cd05608          36 GYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ  115 (280)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345677899999999999999999999999999999999999999887743    2358899999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| ||+|+||+++.++.++++|||++.
T Consensus       116 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  145 (280)
T cd05608         116 RRIIYRDLKPENVLLDNDGNVRISDLGLAV  145 (280)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEeeCccce
Confidence            99999 999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.88  E-value=4.5e-22  Score=137.93  Aligned_cols=105  Identities=21%  Similarity=0.246  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+....|..++... .||+|+.+++++...+..|+|+||+++|+|...+...+.+++..+..++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  122 (323)
T cd05616          43 DVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI  122 (323)
T ss_pred             HHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            445567788888877 5899999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       123 vHrDlkp~Nill~~~~~~kL~DfG~~~  149 (323)
T cd05616         123 IYRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             EecCCCHHHeEECCCCcEEEccCCCce
Confidence            99 999999999999999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.88  E-value=5.6e-22  Score=132.91  Aligned_cols=104  Identities=22%  Similarity=0.153  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+.+|+.+++.++||||+++++.+.. ...++++||+++++|.+++.... .++...+..++.|++.||.|+|++|++
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  123 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLV  123 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence            5678899999999999999999999988 77899999999999999998765 688899999999999999999999999


Q ss_pred             c-cccccceEEecCC-------eeeccceeeeec
Q psy2929          92 N-QHKPRYIAWKVGS-------ILAGGKLYFIEN  117 (131)
Q Consensus        92 h-dlk~~nili~~~~-------~~kl~df~~~~~  117 (131)
                      | ||+|+||+++.++       .++++|||++..
T Consensus       124 H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037         124 HGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             cccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            9 9999999999887       799999997653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.88  E-value=5.5e-22  Score=135.46  Aligned_cols=106  Identities=30%  Similarity=0.462  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      +..+.+.+|+++++.+.||||+++++.+.+.+..|+++||+++++|.+++.....++...+..++.|++.++.++|++|+
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i  122 (290)
T cd05580          43 KQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDI  122 (290)
T ss_pred             hHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            45567889999999999999999999999999999999999999999999888789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       123 ~H~dl~p~nili~~~~~~kl~dfg~~~  149 (290)
T cd05580         123 VYRDLKPENLLLDSDGYIKITDFGFAK  149 (290)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence            99 999999999999999999998765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=4.6e-22  Score=138.21  Aligned_cols=103  Identities=23%  Similarity=0.280  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHcC---CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          14 KYFANEVDNLKSL---SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~---~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .....|..++...   +||+|+.+++.+...+..|++|||+++++|...+...+.+++..+..++.|++.|+.|+|++|+
T Consensus        38 ~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i  117 (330)
T cd05586          38 AHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI  117 (330)
T ss_pred             HHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3445566666654   6999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.++++|||++.
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~a~  144 (330)
T cd05586         118 VYRDLKPENILLDATGHIALCDFGLSK  144 (330)
T ss_pred             EeccCCHHHeEECCCCCEEEecCCcCc
Confidence            99 999999999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA02988 hypothetical protein; Provisional

Probab=99.88  E-value=5.1e-22  Score=135.54  Aligned_cols=105  Identities=17%  Similarity=0.097  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.+|+.+|+.++||||+++++++.+    ....++++||+++|+|.+++.....++......++.+++.|+.++|+
T Consensus        61 ~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~  140 (283)
T PHA02988         61 LIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYK  140 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            35678899999999999999999999877    34689999999999999999887788888999999999999999998


Q ss_pred             c-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 L-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      . +++| ||+|+||+++.++.+|++|||++.
T Consensus       141 ~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~  171 (283)
T PHA02988        141 YTNKPYKNLTSVSFLVTENYKLKIICHGLEK  171 (283)
T ss_pred             cCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence            5 9999 999999999999999999999865

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.88  E-value=4.1e-22  Score=141.92  Aligned_cols=115  Identities=22%  Similarity=0.289  Sum_probs=98.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+. ||||+++++++...+..|++|||+++|+|.+++....                
T Consensus        73 K~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  152 (400)
T cd05105          73 KMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLD  152 (400)
T ss_pred             EecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccc
Confidence            44433344555678999999999996 9999999999999999999999999999998876421                


Q ss_pred             --------------------------------------------------------------------------------
Q psy2929          65 --------------------------------------------------------------------------------   64 (131)
Q Consensus        65 --------------------------------------------------------------------------------   64 (131)
                                                                                                      
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  232 (400)
T cd05105         153 IFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSE  232 (400)
T ss_pred             ccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccC
Confidence                                                                                            


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++...+..++.|++.|+.|+|+.+++| ||+|+||+++.++.+|++|||++.
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~  285 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR  285 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcce
Confidence            2556677889999999999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=6.2e-22  Score=136.13  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=98.5

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.+ +||||+++++.+...+..|+++||+.+++|.+++....  .++...+..++.|++.|+.|+
T Consensus        78 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l  157 (302)
T cd05055          78 HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL  157 (302)
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            344566789999999999 79999999999999999999999999999999997643  378999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+++++| |++|+||+++.++.++++|||++.
T Consensus       158 H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         158 ASKNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             HHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            9999999 999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.88  E-value=6.3e-22  Score=133.15  Aligned_cols=107  Identities=16%  Similarity=0.242  Sum_probs=96.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++.+. ....++++||+++++|.+++... ..+++..++.++.|++.++.|+|+
T Consensus        35 ~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~  113 (257)
T cd05115          35 EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG  113 (257)
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4455677899999999999999999999875 45679999999999999998753 468999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||+|+||+++.++.++++|||++.
T Consensus       114 ~~i~H~dlkp~nil~~~~~~~kl~dfg~~~  143 (257)
T cd05115         114 KNFVHRDLAARNVLLVNQHYAKISDFGLSK  143 (257)
T ss_pred             cCeeecccchheEEEcCCCcEEeccCCccc
Confidence            99999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.88  E-value=1.3e-22  Score=138.11  Aligned_cols=106  Identities=24%  Similarity=0.328  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+..++..|+++||++++.+..+......+++..+..++.|++.|+.|+|+.++
T Consensus        42 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  121 (287)
T cd07848          42 EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI  121 (287)
T ss_pred             cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34567889999999999999999999999999999999999987666555555578999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.+|++|||++.
T Consensus       122 ~H~dlkp~Nill~~~~~~kl~Dfg~~~  148 (287)
T cd07848         122 VHRDIKPENLLISHNDVLKLCDFGFAR  148 (287)
T ss_pred             ecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence            99 999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.6e-22  Score=135.72  Aligned_cols=108  Identities=24%  Similarity=0.299  Sum_probs=97.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc------------CCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV------------KLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~~~   76 (131)
                      .....+.+.+|+++++.++|||++++++.+...+..++++||+.+++|.+++....            .++...++.++.
T Consensus        57 ~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~  136 (295)
T cd05097          57 TKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAV  136 (295)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHH
Confidence            44556678999999999999999999999999999999999999999999986532            256778889999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|+++++| |++|+||+++.++.+|++|||++.
T Consensus       137 ~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~  177 (295)
T cd05097         137 QIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSR  177 (295)
T ss_pred             HHHHHHHHHHhcCeeccccChhhEEEcCCCcEEeccccccc
Confidence            9999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.88  E-value=4.9e-22  Score=134.37  Aligned_cols=107  Identities=18%  Similarity=0.166  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ....+.+.+|+.+++.++||||+++++.+.+....|+++||+++++|.+++....    ..+...+..++.|++.|+.|+
T Consensus        36 ~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~l  115 (268)
T cd05086          36 SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHM  115 (268)
T ss_pred             hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence            4456778999999999999999999999999999999999999999999997542    355667788999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.+++| ||+|+|||++.++.++++|||++.
T Consensus       116 H~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~  147 (268)
T cd05086         116 HKHNFLHSDLALRNCFLTSDLTVKVGDYGIGP  147 (268)
T ss_pred             HHCCeeccCCccceEEEcCCccEEeccccccc
Confidence            9999999 999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.88  E-value=3.4e-22  Score=138.87  Aligned_cols=104  Identities=26%  Similarity=0.392  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+|+.+++.++||||+++++.+....     ..|+++||+. ++|.+.+.....+++..+..++.|++.||.|+|
T Consensus        42 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH  120 (338)
T cd07859          42 DATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIH  120 (338)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence            4456889999999999999999999886543     4799999995 599999988778999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++.++.+|++|||++.
T Consensus       121 ~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859         121 TANVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             HCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            999999 999999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.88  E-value=6.1e-22  Score=148.63  Aligned_cols=108  Identities=27%  Similarity=0.359  Sum_probs=100.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+..|+||||+.+++|.+++...+.++...++.++.|++.||.|||.+
T Consensus        44 ~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~  123 (669)
T cd05610          44 NKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH  123 (669)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34455778899999999999999999999999999999999999999999998877789999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||||+|||++.++.++|+|||++.
T Consensus       124 gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610         124 GIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            9999 999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.88  E-value=7.7e-22  Score=134.18  Aligned_cols=108  Identities=26%  Similarity=0.307  Sum_probs=96.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----------------~~~~~~~   71 (131)
                      .......+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++....                 .++....
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (283)
T cd05090          47 NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF  126 (283)
T ss_pred             CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHH
Confidence            34455678899999999999999999999999999999999999999999985321                 3567788


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|++|++| |++|+||+++.++.++++|||++.
T Consensus       127 ~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~  172 (283)
T cd05090         127 LHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSR  172 (283)
T ss_pred             HHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccc
Confidence            889999999999999999999 999999999999999999999774

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.88  E-value=7e-22  Score=133.67  Aligned_cols=108  Identities=21%  Similarity=0.327  Sum_probs=97.6

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~   71 (131)
                      .....+.+.+|+.+++.+ .||||+++++.+...+..|+++||+++++|.+++....                .++...+
T Consensus        35 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  114 (270)
T cd05047          35 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL  114 (270)
T ss_pred             CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHH
Confidence            345566788999999999 79999999999999999999999999999999987532                3678889


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       115 ~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         115 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            999999999999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=7.4e-22  Score=134.41  Aligned_cols=108  Identities=19%  Similarity=0.234  Sum_probs=97.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.+.|||++++.+.+...  ...++++||+++++|.+++.+.. .++......++.|++.++.|+
T Consensus        46 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l  125 (284)
T cd05079          46 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL  125 (284)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            455566789999999999999999999998775  56899999999999999987654 578899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| |++|+||+++.++.++++|||++.
T Consensus       126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~  157 (284)
T cd05079         126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK  157 (284)
T ss_pred             HHCCeeecccchheEEEcCCCCEEECCCcccc
Confidence            9999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.88  E-value=1.1e-21  Score=134.86  Aligned_cols=107  Identities=18%  Similarity=0.340  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHHH
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETCK   72 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~   72 (131)
                      ....+.+.+|+.+++.+ +||||+++++.+...+..|+++||+.+++|.+++....                .++...+.
T Consensus        61 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (304)
T cd05101          61 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLV  140 (304)
T ss_pred             hHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHH
Confidence            44566788999999999 79999999999999999999999999999999997642                35667788


Q ss_pred             HHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          73 CIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++.|++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       141 ~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~  185 (304)
T cd05101         141 SCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR  185 (304)
T ss_pred             HHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccce
Confidence            99999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.88  E-value=7e-22  Score=133.50  Aligned_cols=107  Identities=19%  Similarity=0.237  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----CCCHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ......+.+|+.+++.++||||+++++.+.+....++++||+++++|.+++....     ..+......++.|++.++.|
T Consensus        36 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~  115 (269)
T cd05087          36 VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLH  115 (269)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHH
Confidence            3444568889999999999999999999998889999999999999999987532     34566777899999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.+++| |++|+||+++.++.++++|||++.
T Consensus       116 lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~  148 (269)
T cd05087         116 LHKNNFIHSDLALRNCLLTADLTVKIGDYGLSH  148 (269)
T ss_pred             HHHCCEeccccCcceEEEcCCCcEEECCccccc
Confidence            99999999 999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.88  E-value=7e-22  Score=132.24  Aligned_cols=105  Identities=28%  Similarity=0.374  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---------cCCCHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---------VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l   82 (131)
                      ..+.+.+|+..++.++|+|++++++.+......++++||+++++|.+++...         ..+++..+..++.|++.|+
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  118 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM  118 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999999999999999999875         5789999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++|+++++| |++|+||+++.++.++++|||.+.
T Consensus       119 ~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~  153 (262)
T cd00192         119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSR  153 (262)
T ss_pred             HHHHcCCcccCccCcceEEECCCCcEEEccccccc
Confidence            9999999999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=8e-22  Score=133.16  Aligned_cols=115  Identities=18%  Similarity=0.276  Sum_probs=101.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      |.+....+....+.+.+|+.+++.+.||||+++++.+......++++||+++++|.+++... +.++...++.++.|++.
T Consensus        38 K~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~  117 (269)
T cd05065          38 KTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAA  117 (269)
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence            33333335556778999999999999999999999999888999999999999999998764 35888999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.++|++|++| |++|+||+++.++.++++|||+..
T Consensus       118 al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~  154 (269)
T cd05065         118 GMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (269)
T ss_pred             HHHHHHHCCEeecccChheEEEcCCCcEEECCCcccc
Confidence            999999999999 999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=9.2e-22  Score=132.68  Aligned_cols=109  Identities=19%  Similarity=0.259  Sum_probs=99.5

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ......+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++.... .++...+..++.|++.|+.++|
T Consensus        44 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh  123 (266)
T cd05033          44 SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS  123 (266)
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344556678899999999999999999999999999999999999999999997643 6889999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++++| |++|+||+++.++.++++|||++.
T Consensus       124 ~~~i~H~di~p~nili~~~~~~~l~dfg~~~  154 (266)
T cd05033         124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             hCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence            999999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.88  E-value=6.6e-22  Score=136.63  Aligned_cols=108  Identities=15%  Similarity=0.142  Sum_probs=96.6

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ......+.+.+|+.+++.++||||+++++.+... ..+++++++++|++.+.+.... .++...+..++.|++.||.|+|
T Consensus        48 ~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH  126 (316)
T cd05108          48 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE  126 (316)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH
Confidence            3455667788999999999999999999998764 4678999999999999998744 5788889999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+||+++.++.+|++|||++.
T Consensus       127 ~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~  157 (316)
T cd05108         127 ERRLVHRDLAARNVLVKTPQHVKITDFGLAK  157 (316)
T ss_pred             hcCeeccccchhheEecCCCcEEEccccccc
Confidence            999999 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.88  E-value=7.3e-22  Score=133.65  Aligned_cols=105  Identities=27%  Similarity=0.281  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---------CCCHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---------KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~l   82 (131)
                      ..+.+.+|+++++.++|||++++++.+...+..++++||+++++|.+++....         .++......++.|++.++
T Consensus        51 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l  130 (275)
T cd05046          51 LQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM  130 (275)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            45678999999999999999999999988889999999999999999998655         588999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|+++++| ||+|+||+++.++.++++||+++.
T Consensus       131 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~  165 (275)
T cd05046         131 DHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSK  165 (275)
T ss_pred             HHhhhcCcccCcCccceEEEeCCCcEEEccccccc
Confidence            9999999999 999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.88  E-value=6.8e-22  Score=137.13  Aligned_cols=106  Identities=20%  Similarity=0.239  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+..|..+++.+. |++|+.+++.+.+.+..|+||||+++++|.+++...+.+++..+..++.|++.|+.|+|++|
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~  121 (323)
T cd05615          42 DDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG  121 (323)
T ss_pred             hHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34456778888888885 67888999999999999999999999999999988778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.++++|||++.
T Consensus       122 ivHrDikp~Nill~~~~~ikL~Dfg~~~  149 (323)
T cd05615         122 IIYRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             eeccCCCHHHeEECCCCCEEEecccccc
Confidence            999 999999999999999999999765

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0612|consensus

Probab=99.88  E-value=5.4e-23  Score=155.92  Aligned_cols=119  Identities=22%  Similarity=0.249  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+...|..|-.+|..-+.+.|++++-+|.+..+.|+||||++||+|..++.+.+++++.....++..++.||.-+|+.|+
T Consensus       117 ~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgy  196 (1317)
T KOG0612|consen  117 AETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGY  196 (1317)
T ss_pred             hhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccc
Confidence            35566888999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeee----eccc-cccCCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFI----ENRQ-VRSGNVNGPF  129 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~----~~~~-~~~~~~gtp~  129 (131)
                      || ||||+|||++..|.+|++|||-.    .++. ..+..+|||-
T Consensus       197 VHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPD  241 (1317)
T KOG0612|consen  197 VHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPD  241 (1317)
T ss_pred             eeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCC
Confidence            99 99999999999999999999854    2333 3355678883

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.88  E-value=8.3e-22  Score=134.93  Aligned_cols=108  Identities=25%  Similarity=0.327  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----------CCCHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----------KLSEETCKCIVYQ   77 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~   77 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+..++++||+++++|.+++....           .++...+..++.|
T Consensus        59 ~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (296)
T cd05095          59 NKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQ  138 (296)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHH
Confidence            44556778999999999999999999999999999999999999999999987643           2556789999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.|+.|+|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       139 i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  178 (296)
T cd05095         139 IASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             HHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccc
Confidence            999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.88  E-value=2.5e-21  Score=129.76  Aligned_cols=108  Identities=25%  Similarity=0.375  Sum_probs=99.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ++...+.+.+|+.+++.++|+||+++++.+.+.+..++++||+++++|.+.+...  ..++...+..++.|++.++.++|
T Consensus        39 ~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  118 (256)
T cd08221          39 SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH  118 (256)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4455667889999999999999999999999999999999999999999999865  35888999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.+++| |++|+||+++.++.+|++|||++.
T Consensus       119 ~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~  149 (256)
T cd08221         119 KAGILHRDIKTLNIFLTKAGLIKLGDFGISK  149 (256)
T ss_pred             hCCccccCCChHhEEEeCCCCEEECcCcceE
Confidence            999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=1.3e-21  Score=133.03  Aligned_cols=106  Identities=23%  Similarity=0.318  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ......+.+|+++++.++||||+++++.+...  ...++++||+++++|.+++... .++...+..++.|++.|+.|+|+
T Consensus        47 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~  125 (283)
T cd05080          47 QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHS  125 (283)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34566788999999999999999999987654  3578999999999999998764 68999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| ||+|+||+++.++.++++|||++.
T Consensus       126 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  155 (283)
T cd05080         126 QHYIHRDLAARNVLLDNDRLVKIGDFGLAK  155 (283)
T ss_pred             CCeeccccChheEEEcCCCcEEEeeccccc
Confidence            99999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.88  E-value=1.5e-21  Score=130.40  Aligned_cols=109  Identities=25%  Similarity=0.310  Sum_probs=98.9

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ........+.+|+.+++.++||||+++++.+...+..++++||+++++|.+++.... .++...+..++.+++.++.++|
T Consensus        31 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  110 (250)
T cd05085          31 LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE  110 (250)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344556678899999999999999999999999999999999999999999887543 5788999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| |++|+||+++.++.++++|||++.
T Consensus       111 ~~~~~H~dl~p~nili~~~~~~~l~d~g~~~  141 (250)
T cd05085         111 SKNCIHRDLAARNCLVGENNVLKISDFGMSR  141 (250)
T ss_pred             hCCeeecccChheEEEcCCCeEEECCCccce
Confidence            999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.88  E-value=1.2e-21  Score=135.16  Aligned_cols=108  Identities=19%  Similarity=0.323  Sum_probs=97.0

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~   71 (131)
                      .......+.+|+.+++.+ +||||+++++.+..++..|+++||+++++|.+++....                .++...+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  136 (314)
T cd05099          57 TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL  136 (314)
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHH
Confidence            344566788999999999 59999999999999999999999999999999997532                3677888


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       137 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~  182 (314)
T cd05099         137 VSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLAR  182 (314)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccc
Confidence            999999999999999999999 999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=1.6e-21  Score=135.31  Aligned_cols=105  Identities=22%  Similarity=0.269  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+.+|+.+++.++||||+++++.+..++..++++||++++++.+++...  ..+++..++.++.|++.||.|+|+
T Consensus        40 ~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  119 (327)
T cd08227          40 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH  119 (327)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344566888999999999999999999999999999999999999999998753  358889999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      ++++| ||||+||+++.++.++++||+.
T Consensus       120 ~~iiH~dlkp~Nil~~~~~~~~l~~~~~  147 (327)
T cd08227         120 MGYVHRSVKASHILISVDGKVYLSGLRS  147 (327)
T ss_pred             CCEecCCCChhhEEEecCCcEEEcccch
Confidence            99999 9999999999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.88  E-value=1.1e-21  Score=133.99  Aligned_cols=108  Identities=18%  Similarity=0.334  Sum_probs=97.4

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------------cCCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------VKLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------------~~~~~~~~   71 (131)
                      ..+....+.+|+.+++.+ +||||+++++.+...+..++++||+++++|.+++...                ..++...+
T Consensus        55 ~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  134 (293)
T cd05053          55 TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL  134 (293)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHH
Confidence            344556788999999999 7999999999999999999999999999999998642                24788889


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       135 ~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~  180 (293)
T cd05053         135 VSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLAR  180 (293)
T ss_pred             HHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCcccccc
Confidence            999999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=2.7e-21  Score=130.40  Aligned_cols=106  Identities=23%  Similarity=0.290  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .....+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++...+.+++..++.++.|++.++.|+|++|+
T Consensus        48 ~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  127 (267)
T cd06645          48 EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGK  127 (267)
T ss_pred             hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34456788999999999999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||++.
T Consensus       128 ~H~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd06645         128 MHRDIKGANILLTDNGHVKLADFGVSA  154 (267)
T ss_pred             ecCCCCHHHEEECCCCCEEECcceeee
Confidence            99 999999999999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=2.6e-21  Score=131.39  Aligned_cols=105  Identities=15%  Similarity=0.068  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++++...+..++||||+++++|..++.. .+.++......++.|++.|+.|+|++++
T Consensus        59 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  138 (274)
T cd05076          59 IALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNL  138 (274)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence            345678899999999999999999999999999999999999999998875 3468888999999999999999999999


Q ss_pred             cc-cccccceEEecCC-------eeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGS-------ILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~-------~~kl~df~~~~  116 (131)
                      +| ||+|+||+++..+       .++++|||...
T Consensus       139 iH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~  172 (274)
T cd05076         139 VHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSF  172 (274)
T ss_pred             cCCCCCcccEEEeccCcccCccceeeecCCcccc
Confidence            99 9999999997643       47999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.88  E-value=1.8e-21  Score=132.28  Aligned_cols=104  Identities=21%  Similarity=0.290  Sum_probs=94.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++.+..++..++++||++++++...    ..+++..+..++.|++.|+.|+|+.
T Consensus        39 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~  114 (279)
T cd06619          39 TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSL  114 (279)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344556788999999999999999999999999999999999999988654    2467888899999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       115 ~i~H~dlkp~Nill~~~~~~~l~dfg~~~  143 (279)
T cd06619         115 KILHRDVKPSNMLVNTRGQVKLCDFGVST  143 (279)
T ss_pred             CEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence            9999 999999999999999999999774

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.88  E-value=1.5e-21  Score=132.47  Aligned_cols=107  Identities=21%  Similarity=0.189  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------CCCHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------KLSEETCKCIVYQIA   79 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~~   79 (131)
                      ......+.+|+.+++.++||||+++++.+......++++||+++++|.+++....          .++...+..++.|++
T Consensus        50 ~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  129 (277)
T cd05062          50 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIA  129 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHH
Confidence            3445568899999999999999999999988889999999999999999987532          245677888999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|+.+++| |++|+||+++.++.++++|||++.
T Consensus       130 ~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~  167 (277)
T cd05062         130 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  167 (277)
T ss_pred             HHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence            9999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.7e-21  Score=130.76  Aligned_cols=105  Identities=24%  Similarity=0.339  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++|||++++++.+...+..|+++|+++++++.+++... ..++...+..++.|++.++.|+|++++
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  122 (262)
T cd06613          43 DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK  122 (262)
T ss_pred             hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5677899999999999999999999999999999999999999999998876 679999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||.+.
T Consensus       123 ~h~dl~p~ni~i~~~~~~~l~d~g~~~  149 (262)
T cd06613         123 IHRDIKGANILLTEDGDVKLADFGVSA  149 (262)
T ss_pred             eecCCChhhEEECCCCCEEECccccch
Confidence            99 999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0574|consensus

Probab=99.87  E-value=1.6e-22  Score=136.39  Aligned_cols=122  Identities=19%  Similarity=0.297  Sum_probs=110.4

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+.+.+..|+.+|+++..|++|++|++|.....+|+|||||..|+..+.+..+. ++.+..+..+++..+.||+|||
T Consensus        67 PV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH  146 (502)
T KOG0574|consen   67 PVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH  146 (502)
T ss_pred             CccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH
Confidence            345678889999999999999999999999999999999999999999999998544 7999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ...-+| |||..|||+..+|..|++|||.+.    ......+..||||
T Consensus       147 ~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPF  194 (502)
T KOG0574|consen  147 DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPF  194 (502)
T ss_pred             HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcc
Confidence            999999 999999999999999999999874    4444566678887

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.87  E-value=1.7e-21  Score=131.38  Aligned_cols=108  Identities=19%  Similarity=0.222  Sum_probs=98.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+..|+++++.++|||++++.+.+...+..|+++|++++++|.+++... +.+++.....++.|++.|+.++|+
T Consensus        46 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~  125 (268)
T cd05063          46 TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD  125 (268)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4455677889999999999999999999999999999999999999999999764 468889999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| |++|+||+++.++.++++|||+..
T Consensus       126 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  155 (268)
T cd05063         126 MNYVHRDLAARNILVNSNLECKVSDFGLSR  155 (268)
T ss_pred             CCeeccccchhhEEEcCCCcEEECCCccce
Confidence            99999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0201|consensus

Probab=99.87  E-value=1.4e-23  Score=146.02  Aligned_cols=123  Identities=21%  Similarity=0.293  Sum_probs=112.3

Q ss_pred             cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ...+...+.++.|+.++.+++++||.++|+++.....+|++|||+.||++.++++..+.+.+..+..++++++.|+.|+|
T Consensus        49 e~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH  128 (467)
T KOG0201|consen   49 EEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLH  128 (467)
T ss_pred             hhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhh
Confidence            34455677899999999999999999999999999999999999999999999999877789999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ..+.+| |||+.|||+...|.+|++|||.+.    ......+++||||
T Consensus       129 ~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPf  176 (467)
T KOG0201|consen  129 SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPF  176 (467)
T ss_pred             hcceecccccccceeEeccCcEEEEecceeeeeechhhcccccccccc
Confidence            999999 999999999999999999999874    4445578899998

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.87  E-value=7.8e-22  Score=132.19  Aligned_cols=103  Identities=31%  Similarity=0.377  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      +...+|+.+++.++||||+++++.+..+...++++|++++++|.+++.....++...+..++.|++.+|.++|+++++| 
T Consensus        43 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~  122 (260)
T PF00069_consen   43 EENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHR  122 (260)
T ss_dssp             HHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             chhhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3445699999999999999999999999999999999999999999997778999999999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeee
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||+|+||+++.++.++++|||.+.
T Consensus       123 dikp~NIl~~~~~~~~l~Dfg~~~  146 (260)
T PF00069_consen  123 DIKPENILLDENGEVKLIDFGSSV  146 (260)
T ss_dssp             SBSGGGEEESTTSEEEESSGTTTE
T ss_pred             cccccccccccccccccccccccc
Confidence            999999999999999999998764

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=2.7e-21  Score=129.81  Aligned_cols=105  Identities=20%  Similarity=0.225  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.+.|||++++++.+. ....++++|++++++|.+++.....+++..+..++.|++.++.++|+.++
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i  116 (257)
T cd05060          38 AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF  116 (257)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence            45667889999999999999999999875 44579999999999999999887779999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||.+.
T Consensus       117 ~H~di~p~nili~~~~~~kl~df~~~~  143 (257)
T cd05060         117 VHRDLAARNVLLVNRHQAKISDFGMSR  143 (257)
T ss_pred             eccCcccceEEEcCCCcEEeccccccc
Confidence            99 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.87  E-value=9.8e-22  Score=135.34  Aligned_cols=104  Identities=28%  Similarity=0.355  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+.+|+.+++.++||||+++++.+..++..++++||+++ ++.+.+...+ .++...+..++.|++.||.|+|++|+
T Consensus        47 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (309)
T cd07872          47 APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV  125 (309)
T ss_pred             cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            344577899999999999999999999999999999999975 8888877654 47888899999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       126 vH~dlkp~Nill~~~~~~kl~Dfg~~~  152 (309)
T cd07872         126 LHRDLKPQNLLINERGELKLADFGLAR  152 (309)
T ss_pred             ecCCCCHHHEEECCCCCEEECccccce
Confidence            99 999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=3.8e-21  Score=128.86  Aligned_cols=108  Identities=24%  Similarity=0.302  Sum_probs=98.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+.+|+.+++.++|||++++.+.+.+++..|+++||++++++.+++...  ..++...+..++.|++.|+.++|
T Consensus        38 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  117 (255)
T cd08219          38 SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH  117 (255)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            3445677889999999999999999999999999999999999999999988753  24788999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| |++|+||+++.++.++++|||.+.
T Consensus       118 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  148 (255)
T cd08219         118 EKRVLHRDIKSKNIFLTQNGKVKLGDFGSAR  148 (255)
T ss_pred             hCCcccCCCCcceEEECCCCcEEEcccCcce
Confidence            999999 999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.87  E-value=1.6e-21  Score=132.27  Aligned_cols=108  Identities=26%  Similarity=0.306  Sum_probs=98.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--------------CCCHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--------------KLSEETCKCI   74 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~   74 (131)
                      .....+.+.+|+.+++.++|||++++++.+......++++||+++++|.+++...+              .++...+..+
T Consensus        48 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~  127 (280)
T cd05049          48 SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI  127 (280)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHH
Confidence            34456789999999999999999999999999999999999999999999997542              3677888999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.++.++|++|++| ||+|+||+++.++.++++|||.+.
T Consensus       128 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~  170 (280)
T cd05049         128 AVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR  170 (280)
T ss_pred             HHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccce
Confidence            999999999999999999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.1e-21  Score=133.87  Aligned_cols=104  Identities=24%  Similarity=0.205  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+|+.+++.++||||+.+++.+.+++..+++|||+++++|.+.+...  ..+++..+..++.|++.|+.|+|+.++
T Consensus        44 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05605          44 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI  123 (285)
T ss_pred             HHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            345678999999999999999999999999999999999999999888654  358899999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~  150 (285)
T cd05605         124 VYRDLKPENILLDDYGHIRISDLGLAV  150 (285)
T ss_pred             EecCCCHHHEEECCCCCEEEeeCCCce
Confidence            99 999999999999999999999765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.87  E-value=2.1e-21  Score=130.45  Aligned_cols=107  Identities=16%  Similarity=0.228  Sum_probs=97.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      +....+.+.+|+.+++.+.||||+++++.+. .+..++++|++++++|.+++.....++......++.|++.|+.++|++
T Consensus        36 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~  114 (257)
T cd05116          36 DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET  114 (257)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3445677899999999999999999999875 445689999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| |++|+||+++.++.++++|||++.
T Consensus       115 ~i~H~dlkp~nill~~~~~~kl~Dfg~~~  143 (257)
T cd05116         115 NFVHRDLAARNVLLVTQHYAKISDFGLSK  143 (257)
T ss_pred             CEeecccchhhEEEcCCCeEEECCCcccc
Confidence            9999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.87  E-value=1.7e-21  Score=133.00  Aligned_cols=108  Identities=19%  Similarity=0.328  Sum_probs=97.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc------------------------c
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC------------------------V   64 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------------------------~   64 (131)
                      .....+.+.+|+.+++.++||||+++++.+..++..++++||+.+++|.+++...                        .
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (290)
T cd05045          43 SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDER  122 (290)
T ss_pred             CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcccc
Confidence            3445667889999999999999999999999999999999999999999988642                        1


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++...+..++.|++.++.++|+.+++| ||+|+||+++.++.++++|||++.
T Consensus       123 ~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~  175 (290)
T cd05045         123 ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSR  175 (290)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccc
Confidence            3677888999999999999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.87  E-value=1.7e-21  Score=134.03  Aligned_cols=107  Identities=20%  Similarity=0.341  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHHH
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETCK   72 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~   72 (131)
                      ....+.+.+|+.+++.+ +||||+++++.+...+..|+++||+++++|.+++....                .++...++
T Consensus        64 ~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~  143 (307)
T cd05098          64 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV  143 (307)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence            44556788899999999 79999999999999999999999999999999997642                36778899


Q ss_pred             HHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          73 CIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++.|++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       144 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~  188 (307)
T cd05098         144 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR  188 (307)
T ss_pred             HHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccc
Confidence            99999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1989|consensus

Probab=99.87  E-value=5.5e-22  Score=146.96  Aligned_cols=108  Identities=23%  Similarity=0.332  Sum_probs=95.9

Q ss_pred             cHHHHHHHHHHHHHHHcCC-CCCceeEEEEE-EeC------CeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-HPNIVTLYESV-LWK------DNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQI   78 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~-~~~------~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~   78 (131)
                      ++...+...+|+++|+.+. |+|||.++++. ..+      -..+|.||||.+|.|-+++..+.  .+++..++.|++++
T Consensus        74 de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv  153 (738)
T KOG1989|consen   74 DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDV  153 (738)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHH
Confidence            7888899999999999996 99999999943 221      24689999999999999998543  69999999999999


Q ss_pred             HHHHHHHHhcc--ccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLM--SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~--~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+.+||...  ++| |||.|||||+.+|.+||||||-+.
T Consensus       154 ~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  154 CEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             HHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            99999999985  999 999999999999999999998653

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.87  E-value=1.6e-21  Score=133.66  Aligned_cols=108  Identities=19%  Similarity=0.284  Sum_probs=96.9

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~   71 (131)
                      .....+.+.+|+.+++.+ +||||+++++.+...+..|+++||+++++|.+++....                .++...+
T Consensus        42 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  121 (297)
T cd05089          42 SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL  121 (297)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHH
Confidence            344556788999999999 69999999999999999999999999999999997532                3677889


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.++|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       122 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  167 (297)
T cd05089         122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR  167 (297)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCc
Confidence            999999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.87  E-value=2.6e-21  Score=129.45  Aligned_cols=108  Identities=24%  Similarity=0.297  Sum_probs=99.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+.+|+++++.++|||++++++.+...+..|+++||+++++|.+++...  ..++...++.++.|++.++.|+|
T Consensus        39 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH  118 (256)
T cd08529          39 NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH  118 (256)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3456777889999999999999999999999999999999999999999999764  36888899999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++| |++|+||+++.++.++++|||+..
T Consensus       119 ~~~i~h~dl~~~nili~~~~~~~l~df~~~~  149 (256)
T cd08529         119 SKKILHRDIKSLNLFLDAYDNVKIGDLGVAK  149 (256)
T ss_pred             HCCcccCCCCcceEEEeCCCCEEEcccccce
Confidence            999999 999999999999999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.2e-21  Score=130.41  Aligned_cols=105  Identities=27%  Similarity=0.369  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+..+...++++|++++++|.+.+.....++......++.|++.|+.++|+.|++
T Consensus        47 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  126 (263)
T cd06625          47 EVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIV  126 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            34568899999999999999999999999999999999999999999998877888999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       127 H~dl~p~nilv~~~~~~~l~dfg~~~  152 (263)
T cd06625         127 HRDIKGANILRDSAGNVKLGDFGASK  152 (263)
T ss_pred             cCCCCHHHEEEcCCCCEEEeecccce
Confidence            9 999999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.87  E-value=2e-21  Score=132.01  Aligned_cols=103  Identities=24%  Similarity=0.205  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .....|+++++.++||||+++++.+......+++|||+++++|.+.+....  .++......++.|++.|+.|+|+.|++
T Consensus        38 ~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv  117 (277)
T cd05607          38 KMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV  117 (277)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            345679999999999999999999999999999999999999998886543  578888889999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       118 H~dikp~Nili~~~~~~~l~Dfg~~~  143 (277)
T cd05607         118 YRDMKPENVLLDDQGNCRLSDLGLAV  143 (277)
T ss_pred             EccCChHhEEEcCCCCEEEeeceeee
Confidence            9 999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=2.9e-21  Score=129.50  Aligned_cols=105  Identities=18%  Similarity=0.268  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+++.+|+.+++.++|+|++++++.+.+.+..++++|++++++|.+++....  .+++.....++.|++.++.|+|+++
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46678899999999999999999999998889999999999999999998765  6899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||.+.
T Consensus       123 i~H~di~p~Nili~~~~~~~l~d~g~~~  150 (256)
T cd05039         123 FVHRDLAARNVLVSEDLVAKVSDFGLAK  150 (256)
T ss_pred             ccchhcccceEEEeCCCCEEEccccccc
Confidence            999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=2.7e-21  Score=129.68  Aligned_cols=105  Identities=23%  Similarity=0.261  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ...+.+.+|+.++++++||||+++++.+.. ...++++|++++++|.+.+....  .++...+..++.|++.||.++|++
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~  116 (257)
T cd05040          38 DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK  116 (257)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence            566778999999999999999999999988 88899999999999999997654  578899999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||+|+||+++.++.++++|||++.
T Consensus       117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~  145 (257)
T cd05040         117 RFIHRDLAARNILLASDDKVKIGDFGLMR  145 (257)
T ss_pred             CccccccCcccEEEecCCEEEeccccccc
Confidence            9999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2.4e-21  Score=130.55  Aligned_cols=105  Identities=28%  Similarity=0.317  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..++++||+++++|.+++...+.++...+..++.|++.++.++|++|++
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~iv  128 (267)
T cd06628          49 MLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGII  128 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            34678899999999999999999999999999999999999999999998877888999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||.+.
T Consensus       129 H~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628         129 HRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cccCCHHHEEEcCCCCEEecccCCCc
Confidence            9 999999999999999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.87  E-value=3.6e-21  Score=131.50  Aligned_cols=106  Identities=27%  Similarity=0.307  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETCKCI   74 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~~~   74 (131)
                      ...+.+.+|+..++.++||||+++++.+...+..++++||+++++|.+++...+                .++...++.+
T Consensus        49 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  128 (291)
T cd05094          49 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI  128 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHH
Confidence            345678899999999999999999999999999999999999999999997542                3688899999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.++.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       129 ~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~  171 (291)
T cd05094         129 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR  171 (291)
T ss_pred             HHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCccc
Confidence            999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=1.6e-21  Score=137.46  Aligned_cols=105  Identities=25%  Similarity=0.297  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ...+.+.+|+.+++.++||||+++++.+...+     ..|+++||+. +++.+.+.....++...+..++.|++.||.|+
T Consensus        41 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  119 (372)
T cd07853          41 VSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYL  119 (372)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            34567889999999999999999999998776     7899999996 48888887777899999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+|||++.++.+|++|||++.
T Consensus       120 H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~  151 (372)
T cd07853         120 HSAGILHRDIKPGNLLVNSNCVLKICDFGLAR  151 (372)
T ss_pred             HhCCeeCCCCChHHEEECCCCCEEecccccee
Confidence            9999999 999999999999999999999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.87  E-value=3.3e-21  Score=131.52  Aligned_cols=107  Identities=20%  Similarity=0.189  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------CCCHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------KLSEETCKCIVYQIA   79 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~~   79 (131)
                      ......+.+|+.+++.++||||+++++.+......+++|||+++|+|.+++....          ......+..++.|++
T Consensus        50 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  129 (288)
T cd05061          50 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA  129 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHH
Confidence            3445567889999999999999999999998899999999999999999997532          234567788999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       130 ~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~  167 (288)
T cd05061         130 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR  167 (288)
T ss_pred             HHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence            9999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.87  E-value=2.8e-21  Score=132.90  Aligned_cols=106  Identities=22%  Similarity=0.285  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+..++..++++|++++++|.+++...+.+++.....++.|++.|+.|+|++++
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (305)
T cd05609          43 NQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGI  122 (305)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34556788999999999999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||++.
T Consensus       123 ~H~dl~p~NIll~~~~~~~l~dfg~~~  149 (305)
T cd05609         123 VHRDLKPDNLLITSMGHIKLTDFGLSK  149 (305)
T ss_pred             cccCCchHHEEECCCCCEEEeeCCCcc
Confidence            99 999999999999999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=4.3e-21  Score=129.51  Aligned_cols=106  Identities=21%  Similarity=0.136  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++||||+++++++..+...++++||++++++..++... ..++......++.|++.|+.|+|+++
T Consensus        46 ~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          46 DISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            34556888999999999999999999999988999999999999998888754 46899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCe-------eeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSI-------LAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~-------~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.       ++++|||++.
T Consensus       126 ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077         126 LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             eECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            999 99999999987654       8999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.87  E-value=2.5e-21  Score=133.35  Aligned_cols=108  Identities=21%  Similarity=0.272  Sum_probs=99.0

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ......+.+.+|+.+++.++||||+++++.+...+..++++||++++++.+++...  ..+++..+..++.|++.||.||
T Consensus        38 ~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~L  117 (314)
T cd08216          38 CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYI  117 (314)
T ss_pred             cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            34556678999999999999999999999999999999999999999999999864  3588899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      |+++++| ||+|+||+++.++.++++||+.+
T Consensus       118 H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~  148 (314)
T cd08216         118 HSKGFIHRSVKASHILLSGDGKVVLSGLRYS  148 (314)
T ss_pred             HHCCeecCCCCcceEEEecCCceEEecCccc
Confidence            9999999 99999999999999999999765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=4e-21  Score=130.44  Aligned_cols=107  Identities=17%  Similarity=0.172  Sum_probs=97.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+..++.++|||++++++.+.. ...++++||+++++|.+++... ..+++..+..++.|++.|+.|+|+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~  127 (279)
T cd05057          49 SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE  127 (279)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34456778899999999999999999999877 7789999999999999999874 368899999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| ||+|+||+++.++.++++|||.+.
T Consensus       128 ~~i~H~di~p~nil~~~~~~~kL~dfg~~~  157 (279)
T cd05057         128 KRLVHRDLAARNVLVKTPQHVKITDFGLAK  157 (279)
T ss_pred             CCEEecccCcceEEEcCCCeEEECCCcccc
Confidence            99999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.87  E-value=2.3e-21  Score=132.99  Aligned_cols=104  Identities=24%  Similarity=0.353  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+.+|+.+++.++||||+++++++..++..++++||+.+ ++.+.+... ..++...+..++.|++.|+.++|++++
T Consensus        47 ~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (301)
T cd07873          47 APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV  125 (301)
T ss_pred             chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            345677899999999999999999999999999999999974 898888764 368889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~  152 (301)
T cd07873         126 LHRDLKPQNLLINERGELKLADFGLAR  152 (301)
T ss_pred             eCCCCCHHHEEECCCCcEEECcCcchh
Confidence            99 999999999999999999999774

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.87  E-value=6.4e-21  Score=128.55  Aligned_cols=105  Identities=22%  Similarity=0.265  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|+.+++.++|||++++++.+......|+++||+++++|.+++...+.++...+..++.|++.++.|+|+.+++
T Consensus        49 ~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  128 (267)
T cd06646          49 DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKM  128 (267)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            34567889999999999999999999999999999999999999999998777889999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       129 H~dl~p~nill~~~~~~~l~dfg~~~  154 (267)
T cd06646         129 HRDIKGANILLTDNGDVKLADFGVAA  154 (267)
T ss_pred             ccCCCHHHEEECCCCCEEECcCccce
Confidence            9 999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.87  E-value=3.6e-21  Score=129.67  Aligned_cols=106  Identities=27%  Similarity=0.311  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      +..+.+.+|+++++.++|+||+++.+.+.+.+..++++||+++++|.+++.+...++...+..++.|++.++.++|+.++
T Consensus        44 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (265)
T cd06631          44 KEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCV  123 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            34566889999999999999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||+..
T Consensus       124 ~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631         124 VHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             ccCCcCHHhEEECCCCeEEeccchhhH
Confidence            99 999999999999999999998764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.87  E-value=3.8e-21  Score=129.55  Aligned_cols=108  Identities=25%  Similarity=0.352  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +......+.+|+.+++.++|||++++++.+.+.+..++++||+++++|.+++..    ...++...+..++.|++.|+.|
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  121 (267)
T cd08228          42 DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH  121 (267)
T ss_pred             CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            445566788999999999999999999999999999999999999999988863    2247888999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+++++| ||+|+||+++.++.++++|||++.
T Consensus       122 LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~  154 (267)
T cd08228         122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             HhhCCeeCCCCCHHHEEEcCCCCEEECccccce
Confidence            99999999 999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=3.1e-21  Score=129.06  Aligned_cols=108  Identities=23%  Similarity=0.317  Sum_probs=99.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+..|+..++.++|||++++++.+.+.+..++++|+++++++.+.+.....  +++.....++.|++.++.++|
T Consensus        41 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh  120 (258)
T smart00219       41 DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE  120 (258)
T ss_pred             ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh
Confidence            333567889999999999999999999999999999999999999999999986543  899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.+++| |++|+||+++.++.++++|||+..
T Consensus       121 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~  151 (258)
T smart00219      121 SKNFIHRDLAARNCLVGENLVVKISDFGLSR  151 (258)
T ss_pred             cCCeeecccccceEEEccCCeEEEcccCCce
Confidence            999999 999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.7e-21  Score=130.27  Aligned_cols=107  Identities=20%  Similarity=0.184  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------CCCHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------KLSEETCKCIVYQIA   79 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~~   79 (131)
                      ......+.+|+.+++.++||||+++++.+......++++||+++++|.+++....          .+++..+..++.|++
T Consensus        50 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  129 (277)
T cd05032          50 MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIA  129 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHH
Confidence            3455678899999999999999999999999999999999999999999987532          256678889999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       130 ~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~  167 (277)
T cd05032         130 DGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTR  167 (277)
T ss_pred             HHHHHHHhCCccccccChheEEEcCCCCEEECCcccch
Confidence            9999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.87  E-value=3.1e-21  Score=129.48  Aligned_cols=104  Identities=18%  Similarity=0.300  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++.+..++..++++||+++++|.+.+... +.++...+..++.|++.|+.|+|++|++
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  122 (256)
T cd05114          43 EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFI  122 (256)
T ss_pred             HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456888999999999999999999999999999999999999999998753 3588899999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||.+.
T Consensus       123 H~dl~p~ni~i~~~~~~kl~d~g~~~  148 (256)
T cd05114         123 HRDLAARNCLVSSTGVVKVSDFGMTR  148 (256)
T ss_pred             ccccCcceEEEcCCCeEEECCCCCcc
Confidence            9 999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.87  E-value=2.4e-21  Score=130.27  Aligned_cols=106  Identities=25%  Similarity=0.364  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++.+.+....++++||+++++|.+++.....++...+..++.|++.|+.++|++++
T Consensus        35 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~  114 (262)
T cd05572          35 GQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGI  114 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            45567899999999999999999999999999999999999999999999887778999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||+..
T Consensus       115 ~h~dl~~~nilv~~~~~~~l~df~~~~  141 (262)
T cd05572         115 IYRDLKPENLLLDSNGYVKLVDFGFAK  141 (262)
T ss_pred             ccCCCCHHHEEEcCCCCEEEeeCCccc
Confidence            99 999999999999999999998765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.87  E-value=5.4e-21  Score=133.04  Aligned_cols=108  Identities=19%  Similarity=0.341  Sum_probs=96.6

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC   71 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~   71 (131)
                      .....+.+.+|+.+++.+ +||||+++++.+...+..++++||+++++|.+++....                .++...+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  136 (334)
T cd05100          57 TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDL  136 (334)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHH
Confidence            344566788999999999 79999999999999999999999999999999987532                3566778


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       137 ~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~  182 (334)
T cd05100         137 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLAR  182 (334)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccce
Confidence            889999999999999999999 999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.6e-21  Score=129.47  Aligned_cols=104  Identities=20%  Similarity=0.289  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++|||++++++.+...+..++++|++++++|.+++....  .++...+..++.|++.|+.++|++|+
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  124 (261)
T cd05068          45 PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY  124 (261)
T ss_pred             HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4568899999999999999999999999999999999999999999997654  58899999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~  151 (261)
T cd05068         125 IHRDLAARNVLVGENNICKVADFGLAR  151 (261)
T ss_pred             eeccCCcceEEEcCCCCEEECCcceEE
Confidence            99 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.87  E-value=4e-21  Score=130.60  Aligned_cols=115  Identities=23%  Similarity=0.240  Sum_probs=99.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------------cC
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------VK   65 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------------~~   65 (131)
                      |++....+....+.+.+|+.+++.++||||+++++.+...+..++++||+.+++|.+++...                ..
T Consensus        41 K~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  120 (283)
T cd05091          41 KTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKST  120 (283)
T ss_pred             EEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccc
Confidence            34433334445567889999999999999999999999999999999999999999998632                13


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          66 LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++...+..++.|++.|+.|+|++|++| ||||+||+++.++.+|++|||++.
T Consensus       121 ~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~  172 (283)
T cd05091         121 LEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFR  172 (283)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEeccccccc
Confidence            677788899999999999999999999 999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.87  E-value=5.2e-21  Score=145.70  Aligned_cols=107  Identities=24%  Similarity=0.250  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-----------cCCCHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-----------VKLSEETCKCIVYQI   78 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~   78 (131)
                      +...+++.+|+++++.++||||+++++.+.+.+..|++|||++|++|.+++...           ...+...+..++.|+
T Consensus        43 e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QI  122 (932)
T PRK13184         43 PLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI  122 (932)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHH
Confidence            445667899999999999999999999999999999999999999999998642           124456678899999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.||.|+|++|++| ||||+||+++.++.++++|||++.
T Consensus       123 a~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184        123 CATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             HHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            99999999999999 999999999999999999999875

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.86  E-value=5.8e-21  Score=130.31  Aligned_cols=107  Identities=27%  Similarity=0.343  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------------CCCHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------------KLSEETCKCIVY   76 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~   76 (131)
                      ....+.+.+|+.+++.++|||++++++.+...+..++++||+++++|.+++...+             .+++..+..++.
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  127 (288)
T cd05093          48 DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ  127 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHH
Confidence            4456678999999999999999999999999999999999999999999997543             378899999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.++.|+|++|++| |++|+||+++.++.++++|||++.
T Consensus       128 ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  168 (288)
T cd05093         128 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR  168 (288)
T ss_pred             HHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccc
Confidence            9999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=5.2e-21  Score=130.11  Aligned_cols=108  Identities=24%  Similarity=0.305  Sum_probs=96.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+++++.++||||+++.+.+...  ...++++||+++++|.+++... ..++......++.|++.||.|+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~L  124 (284)
T cd05081          45 TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYL  124 (284)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH
Confidence            344566789999999999999999999987543  4689999999999999999764 3588899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.++++|||++.
T Consensus       125 H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081         125 GSKRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             HHCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence            9999999 999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.86  E-value=1.1e-20  Score=128.26  Aligned_cols=106  Identities=18%  Similarity=0.267  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++|||++++++.+.+....|+++||+++++|.+++.. .+++...+..++.|++.++.++|+++
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06640          43 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK  121 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45567789999999999999999999999999999999999999999998875 46888889999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~  149 (277)
T cd06640         122 KIHRDIKAANVLLSEQGDVKLADFGVAG  149 (277)
T ss_pred             ccCcCCChhhEEEcCCCCEEEcccccce
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.86  E-value=5.9e-21  Score=128.30  Aligned_cols=104  Identities=17%  Similarity=0.226  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++...+..++++||+.+++|.+++.... .+++..++.++.|++.|+.|+|+.|++
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  122 (256)
T cd05113          43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI  122 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            3568899999999999999999999998888999999999999999987643 689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.+|++|||...
T Consensus       123 H~dl~p~nili~~~~~~kl~d~g~~~  148 (256)
T cd05113         123 HRDLAARNCLVDDQGCVKVSDFGLSR  148 (256)
T ss_pred             ccccCcceEEEcCCCCEEECCCccce
Confidence            9 999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=9.8e-21  Score=128.51  Aligned_cols=108  Identities=26%  Similarity=0.422  Sum_probs=99.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +....+.+.+|+.+++.++|||++++++.+..+...|+++||+++++|.+++... ..++...+..++.|++.++.|+|+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~  121 (280)
T cd06611          42 SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS  121 (280)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4456677889999999999999999999999999999999999999999998764 368999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| |++|+||+++.++.++++|||+..
T Consensus       122 ~~i~h~dl~p~nili~~~~~~~l~d~g~~~  151 (280)
T cd06611         122 HKVIHRDLKAGNILLTLDGDVKLADFGVSA  151 (280)
T ss_pred             CCcccCCCChhhEEECCCCCEEEccCccch
Confidence            99999 999999999999999999998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.86  E-value=4.6e-21  Score=130.09  Aligned_cols=105  Identities=24%  Similarity=0.216  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|||++++++.+...+..|+++||+++++|.+++....  .++......++.|++.++.|+|++|
T Consensus        36 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          36 GEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             hhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34556789999999999999999999999999999999999999999997755  6899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||...
T Consensus       116 i~H~di~p~Nil~~~~~~~~l~dfg~~~  143 (277)
T cd05577         116 IVYRDLKPENVLLDDHGNVRISDLGLAV  143 (277)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCcchh
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.86  E-value=1e-20  Score=128.42  Aligned_cols=108  Identities=14%  Similarity=0.140  Sum_probs=96.3

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ......+.+.+|..+++.+.||||+.+++.+.. ...+++++++++|++.+.+... +.++......++.|++.|+.|+|
T Consensus        48 ~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH  126 (279)
T cd05109          48 TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE  126 (279)
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345556778899999999999999999998865 4578999999999999998764 35889999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++++| ||+|+||+++.++.++++|||++.
T Consensus       127 ~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~  157 (279)
T cd05109         127 EVRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (279)
T ss_pred             HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence            999999 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.86  E-value=1e-20  Score=128.66  Aligned_cols=108  Identities=23%  Similarity=0.394  Sum_probs=98.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +....+.+.+|+.+++.++|||++++++.+..+...|+++||++++++...+.. ..++++..+..++.|++.+|.|+|+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~  121 (282)
T cd06643          42 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE  121 (282)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345567788999999999999999999999999999999999999999888765 3468999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~  151 (282)
T cd06643         122 NKIIHRDLKAGNILFTLDGDIKLADFGVSA  151 (282)
T ss_pred             CCeeecCCCcccEEEccCCCEEEccccccc
Confidence            99999 999999999999999999999763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=2e-21  Score=132.24  Aligned_cols=109  Identities=20%  Similarity=0.327  Sum_probs=98.7

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---cCCCHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      .++.....+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++...   ..+++..+..++.|++.++.|
T Consensus        38 ~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  117 (286)
T cd06622          38 LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKF  117 (286)
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHH
Confidence            34555677889999999999999999999999999999999999999999988763   268999999999999999999


Q ss_pred             HHh-ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHS-LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~-~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+ .+++| ||+|+||+++.++.++++|||++.
T Consensus       118 LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  151 (286)
T cd06622         118 LKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSG  151 (286)
T ss_pred             HHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcc
Confidence            997 59999 999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.86  E-value=8e-21  Score=127.68  Aligned_cols=108  Identities=22%  Similarity=0.257  Sum_probs=94.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEE-eCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVL-WKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+.+|+.+++.++|||++++++.+. .++..++++||+.+++|.+++.... ..+......++.|++.|+.|+|
T Consensus        36 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  115 (262)
T cd05058          36 DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA  115 (262)
T ss_pred             CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4455677889999999999999999999765 4556789999999999999997643 4567778889999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.+++| ||+|+||+++.++.++++|||++.
T Consensus       116 ~~~i~H~dlk~~nili~~~~~~kl~dfg~~~  146 (262)
T cd05058         116 SKKFVHRDLAARNCMLDESFTVKVADFGLAR  146 (262)
T ss_pred             hCCccccccCcceEEEcCCCcEEECCccccc
Confidence            999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=5.3e-21  Score=130.35  Aligned_cols=109  Identities=21%  Similarity=0.266  Sum_probs=97.2

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------------C
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------------K   65 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------------~   65 (131)
                      .+......+.+|+.+++.++|||++++++.+...+..++++||+++++|.+++....                      .
T Consensus        47 ~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (288)
T cd05050          47 ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP  126 (288)
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccc
Confidence            344556678899999999999999999999998889999999999999999997432                      3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          66 LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++...++.++.|++.|+.++|+++++| ||+|+||+++.++.++++|||+..
T Consensus       127 l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  178 (288)
T cd05050         127 LSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR  178 (288)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccce
Confidence            567778899999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.86  E-value=7.2e-21  Score=129.38  Aligned_cols=105  Identities=19%  Similarity=0.179  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .....+..|+..++.++||||+++++.+. ....++++|++++|+|.+++... ..+++.....++.|++.|+.|+|+++
T Consensus        51 ~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T cd05111          51 QTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR  129 (279)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34456778888999999999999999875 44567899999999999999764 46899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.+|++|||.+.
T Consensus       130 iiH~dlkp~nili~~~~~~kl~Dfg~~~  157 (279)
T cd05111         130 MVHRNLAARNILLKSDSIVQIADFGVAD  157 (279)
T ss_pred             EeccccCcceEEEcCCCcEEEcCCccce
Confidence            999 999999999999999999999774

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG1094|consensus

Probab=99.86  E-value=1.1e-21  Score=141.30  Aligned_cols=116  Identities=27%  Similarity=0.315  Sum_probs=102.6

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~   78 (131)
                      ||.++.......+..|.+|+++|.+++||||+.+.+.|..++.+++++||++.|+|.+++..+.  .........++.|+
T Consensus       567 VK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqi  646 (807)
T KOG1094|consen  567 VKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQI  646 (807)
T ss_pred             EeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHH
Confidence            3555544445567889999999999999999999999999999999999999999999998774  34555667799999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..|+.||.+.+++| |+.+.|+|++.++++|++|||.+.
T Consensus       647 asgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  647 ASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             HHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence            99999999999999 999999999999999999998765

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=6.2e-21  Score=129.37  Aligned_cols=106  Identities=19%  Similarity=0.293  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+.+|+.+++.+.||||+++++++..  ....++++||+++++|.+++.... .++......++.|++.||.++|+
T Consensus        48 ~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~  127 (284)
T cd05038          48 QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS  127 (284)
T ss_pred             HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh
Confidence            356779999999999999999999998877  557899999999999999998754 58899999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| |++|+||+++.++.++++|||.+.
T Consensus       128 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  157 (284)
T cd05038         128 QRYIHRDLAARNILVESEDLVKISDFGLAK  157 (284)
T ss_pred             CCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence            99999 999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.86  E-value=7.2e-21  Score=129.25  Aligned_cols=105  Identities=24%  Similarity=0.284  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++++.+......++++||++++.+..+......+++..+..++.|++.++.|+|+.|++
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~  122 (286)
T cd07847          43 IKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCI  122 (286)
T ss_pred             ccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            34557889999999999999999999999999999999999988888777666799999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       123 H~dl~p~nil~~~~~~~~l~dfg~~~  148 (286)
T cd07847         123 HRDVKPENILITKQGQIKLCDFGFAR  148 (286)
T ss_pred             ecCCChhhEEEcCCCcEEECccccce
Confidence            9 999999999999999999998765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0662|consensus

Probab=99.86  E-value=3.5e-22  Score=126.31  Aligned_cols=109  Identities=21%  Similarity=0.257  Sum_probs=99.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ++.......+|+.+++.++|.||+++++....+....+|+|++ ..+|..+.++.+ .+++..+..++.|++.|+.+||+
T Consensus        41 degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchs  119 (292)
T KOG0662|consen   41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS  119 (292)
T ss_pred             CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh
Confidence            4456677899999999999999999999999999999999999 459999998755 58999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeecc
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIENR  118 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~~  118 (131)
                      .++.| |+||+|+||..+|..|++|||++...
T Consensus       120 hnvlhrdlkpqnllin~ngelkladfglaraf  151 (292)
T KOG0662|consen  120 HNVLHRDLKPQNLLINRNGELKLADFGLARAF  151 (292)
T ss_pred             hhhhhccCCcceEEeccCCcEEecccchhhhc
Confidence            99999 99999999999999999999987543

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.86  E-value=7.1e-21  Score=128.24  Aligned_cols=107  Identities=26%  Similarity=0.360  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ....+.+.+|+.+++.++|||++++++.+..++..++++|++++++|.+++..    ...+++.....++.|++.++.|+
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L  122 (267)
T cd08229          43 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM  122 (267)
T ss_pred             HHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            34556788999999999999999999999999999999999999999998874    23578889999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.++++|||+..
T Consensus       123 H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  154 (267)
T cd08229         123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             HHCCeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence            9999999 999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.86  E-value=7.5e-21  Score=127.67  Aligned_cols=103  Identities=22%  Similarity=0.281  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ..+.+|+.+++.++||||+++++.+...+..|+++|++++++|.+++... ..++...+..++.|++.++.++|+++++|
T Consensus        44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H  123 (256)
T cd05059          44 DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH  123 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            45778999999999999999999999999999999999999999998764 36788999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++.++.++++|||.+.
T Consensus       124 ~dl~p~ni~i~~~~~~kl~dfg~~~  148 (256)
T cd05059         124 RDLAARNCLVGEDNVVKVSDFGLAR  148 (256)
T ss_pred             ccccHhhEEECCCCcEEECCcccce
Confidence             999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.86  E-value=1.2e-20  Score=129.46  Aligned_cols=104  Identities=22%  Similarity=0.369  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++.+.+......|+++||+++++|.+++... .++...+..++.|++.|+.|+|+.|++
T Consensus        60 ~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~  138 (296)
T cd06654          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVI  138 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            3466889999999999999999999999999999999999999999988653 578889999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       139 H~dLkp~Nill~~~~~~kl~dfg~~~  164 (296)
T cd06654         139 HRDIKSDNILLGMDGSVKLTDFGFCA  164 (296)
T ss_pred             cCCCCHHHEEEcCCCCEEECccccch
Confidence            9 999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4721|consensus

Probab=99.86  E-value=2.3e-21  Score=139.55  Aligned_cols=105  Identities=18%  Similarity=0.222  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+--..+++.|+.++||||+.+.+.|.....++++|||+..|.|..+++...++.+..+..|..+++.|+.|||.+.|+
T Consensus       155 V~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKII  234 (904)
T KOG4721|consen  155 VRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKII  234 (904)
T ss_pred             HhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHh
Confidence            33444568889999999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |||.-||||+.+..+||+|||-..
T Consensus       235 HRDLKSPNiLIs~~d~VKIsDFGTS~  260 (904)
T KOG4721|consen  235 HRDLKSPNILISYDDVVKISDFGTSK  260 (904)
T ss_pred             hhccCCCceEeeccceEEeccccchH
Confidence            9 999999999999999999998653

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.86  E-value=2e-21  Score=130.37  Aligned_cols=106  Identities=30%  Similarity=0.427  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++|||++++++.+...+..|+++|++++++|.+++.+.+.+++..+..++.|++.+|.++|++++
T Consensus        35 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  114 (265)
T cd05579          35 NQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGI  114 (265)
T ss_pred             hHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence            45667889999999999999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       115 ~H~di~~~nil~~~~~~~~l~dfg~~~  141 (265)
T cd05579         115 IHRDLKPDNILIDSNGHLKLTDFGLSK  141 (265)
T ss_pred             ecCCCCHHHeEEcCCCCEEEEecccch
Confidence            99 999999999999999999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.86  E-value=6.5e-21  Score=128.56  Aligned_cols=106  Identities=23%  Similarity=0.354  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-------cCCCHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-------VKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~   83 (131)
                      .....+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++...       ..++...+..++.|++.++.
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  120 (269)
T cd05044          41 QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV  120 (269)
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence            45667889999999999999999999999999999999999999999999743       23677889999999999999


Q ss_pred             HHHhccccc-cccccceEEecCC-----eeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGS-----ILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~-----~~kl~df~~~~  116 (131)
                      |+|+++++| |++|+||+++.++     .++++|||++.
T Consensus       121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044         121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence            999999999 9999999999887     89999998764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.86  E-value=1.6e-21  Score=130.89  Aligned_cols=106  Identities=29%  Similarity=0.427  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      +..+.+.+|++++++++||||+++++.+......++++||+.+++|.+.+.....+++..+..++.|++.++.|+|++++
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i  121 (258)
T cd05578          42 GSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGI  121 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45677899999999999999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||...
T Consensus       122 ~h~dl~~~nil~~~~~~~~l~d~~~~~  148 (258)
T cd05578         122 IHRDIKPDNILLDEQGHVHITDFNIAT  148 (258)
T ss_pred             eccCCCHHHeEEcCCCCEEEeeccccc
Confidence            99 999999999999999999998764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.86  E-value=1.2e-20  Score=128.25  Aligned_cols=108  Identities=26%  Similarity=0.330  Sum_probs=98.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---------------CCCHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---------------KLSEETCKC   73 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~   73 (131)
                      .....+.+.+|+++++.+.||||+++++.+...+..++++||+++++|.+++....               .++...+..
T Consensus        47 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~  126 (280)
T cd05092          47 SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA  126 (280)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHH
Confidence            34556789999999999999999999999999999999999999999999997643               367888999


Q ss_pred             HHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          74 IVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.|++.|+.|+|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       127 ~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~  170 (280)
T cd05092         127 IASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR  170 (280)
T ss_pred             HHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCcee
Confidence            9999999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.86  E-value=6.8e-21  Score=135.70  Aligned_cols=115  Identities=22%  Similarity=0.276  Sum_probs=97.6

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+. ||||+++++++..++..++++||+.+|+|.+++....                
T Consensus        73 K~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  152 (401)
T cd05107          73 KMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGS  152 (401)
T ss_pred             EecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccc
Confidence            44443333444557889999999997 9999999999999999999999999999999986431                


Q ss_pred             --------------------------------------------------------------------------------
Q psy2929          65 --------------------------------------------------------------------------------   64 (131)
Q Consensus        65 --------------------------------------------------------------------------------   64 (131)
                                                                                                      
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (401)
T cd05107         153 LISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINE  232 (401)
T ss_pred             ccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcC
Confidence                                                                                            


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 --KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 --~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                        .++...+..++.|++.|+.|+|+.+++| |++|+|||++.++.++++|||++.
T Consensus       233 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~  287 (401)
T cd05107         233 SPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR  287 (401)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcce
Confidence              2455567788999999999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=9.6e-21  Score=127.34  Aligned_cols=106  Identities=17%  Similarity=0.129  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.+.|||++++++.+......++++||+++|+|.+++.... .++......++.|++.|+.|+|++|
T Consensus        41 ~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          41 NYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345668889999999999999999999999889999999999999999998654 5788899999999999999999999


Q ss_pred             ccc-cccccceEEecCCe--------eeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSI--------LAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~--------~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.        ++++|||+..
T Consensus       121 iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078         121 LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            999 99999999987765        5889998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG1095|consensus

Probab=99.86  E-value=2.6e-21  Score=147.31  Aligned_cols=116  Identities=22%  Similarity=0.297  Sum_probs=108.1

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc------c-CCCHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC------V-KLSEETCKC   73 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~-~~~~~~~~~   73 (131)
                      ||.+.+..+.+....|.+|..+|+.++||||+++.|.+.+....++++|||++|+|..++...      . .+....+..
T Consensus       727 iK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~  806 (1025)
T KOG1095|consen  727 VKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLA  806 (1025)
T ss_pred             EEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHH
Confidence            466767778889999999999999999999999999999999999999999999999999875      2 478889999


Q ss_pred             HHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          74 IVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.+++.|+.||++++++| ||...|+|++....+||+|||+++
T Consensus       807 ~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  807 FALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             HHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence            9999999999999999999 999999999999999999999986

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.86  E-value=1.3e-20  Score=129.19  Aligned_cols=104  Identities=22%  Similarity=0.366  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++++.+...+..|+++||++++++.+++... .++...+..++.|++.++.++|+.|++
T Consensus        59 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~  137 (297)
T cd06656          59 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVI  137 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            4566889999999999999999999999999999999999999999998653 578889999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       138 H~dL~p~Nili~~~~~~~l~Dfg~~~  163 (297)
T cd06656         138 HRDIKSDNILLGMDGSVKLTDFGFCA  163 (297)
T ss_pred             cCCCCHHHEEECCCCCEEECcCccce
Confidence            9 999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.86  E-value=6.2e-21  Score=128.51  Aligned_cols=105  Identities=18%  Similarity=0.294  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|||++++++.+..++..++++||+++++|.+++....  .+++...+.++.|++.++.++|++|
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          45 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45668899999999999999999999999999999999999999999987643  5788889999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       125 i~H~dlkp~nil~~~~~~~kl~df~~~~  152 (263)
T cd05052         125 FIHRDLAARNCLVGENHLVKVADFGLSR  152 (263)
T ss_pred             EeecccCcceEEEcCCCcEEeCCCcccc
Confidence            999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0658|consensus

Probab=99.86  E-value=7.6e-22  Score=134.82  Aligned_cols=101  Identities=25%  Similarity=0.289  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .-.+|+++|+.+.|||||++.-+|....     +..+|+||++. +|.+.++.    ...++...+..+..|+.+|+.||
T Consensus        63 ~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL  141 (364)
T KOG0658|consen   63 YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL  141 (364)
T ss_pred             cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH
Confidence            4567999999999999999987776432     34689999987 99999884    33678888999999999999999


Q ss_pred             Hhccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      |+.|++| ||||+|+|++.+ |.+||||||-+.
T Consensus       142 h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen  142 HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             HhcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            9999999 999999999987 999999999764

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.86  E-value=9.8e-21  Score=128.48  Aligned_cols=108  Identities=19%  Similarity=0.219  Sum_probs=96.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------CCCHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------KLSEETCKCIVYQIAMA   81 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~   81 (131)
                      .......+.+|+.+++.++||||+++++.+...+..++++||+++++|.+++....       .++...+..++.|++.+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~  128 (277)
T cd05036          49 SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG  128 (277)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            34455678899999999999999999999999889999999999999999997653       37888899999999999


Q ss_pred             HHHHHhccccc-cccccceEEecCC---eeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKVGS---ILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~~~---~~kl~df~~~~  116 (131)
                      +.|+|+++++| ||+|+||+++.++   .++++|||++.
T Consensus       129 l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~  167 (277)
T cd05036         129 CKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR  167 (277)
T ss_pred             HHHHHHCCEeecccchheEEEeccCCCcceEeccCcccc
Confidence            99999999999 9999999998765   58999999764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.86  E-value=7e-21  Score=129.86  Aligned_cols=102  Identities=25%  Similarity=0.349  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ..+.+|+.+++.++||||+++++.+.+.+..++|+||+.+ +|.+++.... .+++..+..++.|++.||.|+|+++++|
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H  126 (291)
T cd07844          48 FTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH  126 (291)
T ss_pred             hhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            4467899999999999999999999999999999999975 9999887643 5789999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||+|+||+++.++.++++|||++.
T Consensus       127 ~dl~p~nil~~~~~~~kl~dfg~~~  151 (291)
T cd07844         127 RDLKPQNLLISERGELKLADFGLAR  151 (291)
T ss_pred             ccCCHHHEEEcCCCCEEECcccccc
Confidence             999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.2e-20  Score=126.13  Aligned_cols=107  Identities=23%  Similarity=0.332  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.+.||||+.+++.+......++++|+++++++.+++... ..++...+..++.+++.++.++|++
T Consensus        33 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~  112 (251)
T cd05041          33 PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK  112 (251)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            345677899999999999999999999999999999999999999999998764 3578889999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||++.
T Consensus       113 ~i~h~di~p~nili~~~~~~~l~d~g~~~  141 (251)
T cd05041         113 NCIHRDLAARNCLVGENNVLKISDFGMSR  141 (251)
T ss_pred             CEehhhcCcceEEEcCCCcEEEeeccccc
Confidence            9999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=8.2e-21  Score=129.27  Aligned_cols=108  Identities=20%  Similarity=0.243  Sum_probs=99.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-   87 (131)
                      .+...+.+.+|+++++.++||||+++++.+......++++||+++++|.+++...+.++...+..++.+++.++.|+|+ 
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~  122 (284)
T cd06620          43 KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV  122 (284)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            3455677899999999999999999999999999999999999999999999887788999999999999999999997 


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++| |++|+||+++.++.++++|||+..
T Consensus       123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~  152 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSG  152 (284)
T ss_pred             cCeeccCCCHHHEEECCCCcEEEccCCccc
Confidence            59999 999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.86  E-value=9.7e-21  Score=129.21  Aligned_cols=104  Identities=23%  Similarity=0.195  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+|+.+++.++|++++.+.+.+.+.+..++++||+++++|.+++...+  .++...+..++.|++.|+.|+|+.++
T Consensus        44 ~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05630          44 ESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI  123 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            4456789999999999999999999999999999999999999999886543  58889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       124 iH~dikp~Nil~~~~~~~~l~Dfg~~~  150 (285)
T cd05630         124 VYRDLKPENILLDDHGHIRISDLGLAV  150 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeecccee
Confidence            99 999999999999999999999775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.86  E-value=2e-20  Score=127.85  Aligned_cols=108  Identities=22%  Similarity=0.392  Sum_probs=98.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +....+.+.+|+.+++.++|||++++++.+..+...+++|||++++++..++.. ...+++..+..++.|++.++.++|+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~  128 (292)
T cd06644          49 SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS  128 (292)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            455667788999999999999999999999999999999999999999888765 3468999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++| |++|+||+++.++.++++|||+..
T Consensus       129 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  158 (292)
T cd06644         129 MKIIHRDLKAGNVLLTLDGDIKLADFGVSA  158 (292)
T ss_pred             CCeeecCCCcceEEEcCCCCEEEccCccce
Confidence            99999 999999999999999999998753

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.86  E-value=1.3e-20  Score=127.32  Aligned_cols=106  Identities=22%  Similarity=0.301  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.+.|||++++++.+.+ ...|+++||+++++|.+++.... .++...+..++.|++.|+.++|+.
T Consensus        48 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  126 (270)
T cd05056          48 PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK  126 (270)
T ss_pred             HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            5566788999999999999999999998865 45689999999999999998644 588999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||+|+||+++..+.++++|||++.
T Consensus       127 ~~~H~dl~p~nili~~~~~~~l~d~g~~~  155 (270)
T cd05056         127 RFVHRDIAARNVLVSSPDCVKLGDFGLSR  155 (270)
T ss_pred             CeeccccChheEEEecCCCeEEccCceee
Confidence            9999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.86  E-value=3.9e-21  Score=130.38  Aligned_cols=106  Identities=20%  Similarity=0.281  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++.+......|+++||++++++.+++.. ..+++..+..++.|++.++.|+|++|
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (277)
T cd06642          43 EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER  121 (277)
T ss_pred             hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            44566789999999999999999999999999999999999999999988865 46888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06642         122 KIHRDIKAANVLLSEQGDVKLADFGVAG  149 (277)
T ss_pred             eeccCCChheEEEeCCCCEEEccccccc
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.85  E-value=5.5e-21  Score=128.57  Aligned_cols=108  Identities=21%  Similarity=0.313  Sum_probs=99.8

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+..++++|++.+++|.+++... ..+++..+..++.|++.++.++|+
T Consensus        39 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          39 NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            3456677889999999999999999999999999999999999989999999876 578999999999999999999999


Q ss_pred             -ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 -LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 -~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+++| ||+|+||+++.++.++++|||.+.
T Consensus       119 ~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~  149 (265)
T cd06605         119 KHKIIHRDVKPSNILVNSRGQIKLCDFGVSG  149 (265)
T ss_pred             CCCeecCCCCHHHEEECCCCCEEEeecccch
Confidence             99999 999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.85  E-value=1.4e-20  Score=126.47  Aligned_cols=107  Identities=29%  Similarity=0.453  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      +...+.+.+|+.+++.++|+||+++++.....+..++++||+++++|.+++......+......++.+++.++.++|+.|
T Consensus        40 ~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          40 PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            34677899999999999999999999999999999999999999999999988767888899999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||...
T Consensus       120 i~H~dl~~~nil~~~~~~~kl~d~g~~~  147 (264)
T cd06626         120 IVHRDIKPANIFLDHNGVIKLGDFGCAV  147 (264)
T ss_pred             cccCCCCHHHEEECCCCCEEEccccccc
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.85  E-value=2e-20  Score=125.85  Aligned_cols=108  Identities=26%  Similarity=0.350  Sum_probs=98.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +....+.+.+|+++++.++|++++++++.+...+..++++||+++++|.+++...    ..++...+..++.+++.++.+
T Consensus        42 ~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (267)
T cd08224          42 DAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH  121 (267)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999999999999999999999999999988642    247889999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.|++| |++|+||+++.++.++++|||+..
T Consensus       122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~  154 (267)
T cd08224         122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             HHhCCEecCCcChhhEEECCCCcEEEeccceee
Confidence            99999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.85  E-value=1.1e-20  Score=129.26  Aligned_cols=104  Identities=24%  Similarity=0.308  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+..|+.+++.++|+||+++++.+.+....++|+||+ +++|.+++.... .+++..+..++.|++.||.|+|++|+
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  123 (298)
T cd07841          45 INFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI  123 (298)
T ss_pred             hhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3456778999999999999999999999999999999999 889999998765 78999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||+..
T Consensus       124 ~H~dl~p~nill~~~~~~~l~dfg~~~  150 (298)
T cd07841         124 LHRDLKPNNLLIASDGVLKLADFGLAR  150 (298)
T ss_pred             eecCCChhhEEEcCCCCEEEccceeee
Confidence            99 999999999999999999999775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.85  E-value=1.8e-20  Score=125.80  Aligned_cols=105  Identities=18%  Similarity=0.269  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+++.++|++++++++.+.. ....++++||+++++|.+++....  .+++.....++.|++.++.++|++
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  121 (256)
T cd05082          42 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN  121 (256)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34568899999999999999999997654 456899999999999999987644  378889999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~i~H~dlkp~nil~~~~~~~kl~dfg~~~  150 (256)
T cd05082         122 NFVHRDLAARNVLVSEDNVAKVSDFGLTK  150 (256)
T ss_pred             CEeccccchheEEEcCCCcEEecCCccce
Confidence            9999 999999999999999999999765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.85  E-value=1e-20  Score=132.85  Aligned_cols=104  Identities=23%  Similarity=0.321  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ......+.+|+.+++.++||||+++++.+...+      ..|+++||+.+ ++.+.+..  .++...+..++.|++.||.
T Consensus        61 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~  137 (359)
T cd07876          61 QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIK  137 (359)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHH
Confidence            345567889999999999999999999986543      46999999965 67666543  4788889999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       138 ~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876         138 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence            999999999 999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.85  E-value=1.4e-20  Score=126.37  Aligned_cols=106  Identities=25%  Similarity=0.366  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-cc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-LM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~   89 (131)
                      ...+.+.+|+..++.++|||++++++.+......++++||+++++|.+++.....+++.....++.|++.++.++|+ .+
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~  120 (264)
T cd06623          41 EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH  120 (264)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            45677999999999999999999999999999999999999999999999887789999999999999999999999 99


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||...
T Consensus       121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~  148 (264)
T cd06623         121 IIHRDIKPSNLLINSKGEVKIADFGISK  148 (264)
T ss_pred             CccCCCCHHHEEECCCCCEEEccCccce
Confidence            999 999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.85  E-value=8.5e-21  Score=128.94  Aligned_cols=104  Identities=23%  Similarity=0.380  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+|+.+++.++|||++++++.+.+++..|+++||++ +++.+++...   ..+++..++.++.|++.||.|+|++
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~  120 (285)
T cd07861          42 VPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR  120 (285)
T ss_pred             chHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567889999999999999999999999999999999997 5888887643   3588999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||++.
T Consensus       121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~  149 (285)
T cd07861         121 RVLHRDLKPQNLLIDNKGVIKLADFGLAR  149 (285)
T ss_pred             CeeecCCCHHHEEEcCCCcEEECccccee
Confidence            9999 999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.85  E-value=1.5e-20  Score=125.88  Aligned_cols=107  Identities=28%  Similarity=0.407  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ++..+.+.+|+.+++.++|||++++++.+......++++||+++++|.+++.....++...+..++.|++.++.++|+.|
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          43 QEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34556789999999999999999999999999999999999999999999988767889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||...
T Consensus       123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~  150 (258)
T cd06632         123 TVHRDIKGANILVDTNGVVKLADFGMAK  150 (258)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccce
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2e-20  Score=126.61  Aligned_cols=106  Identities=20%  Similarity=0.295  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ......+.+|+.+++.++|||++++.+.+.+....|+++|++++++|.+++... .++...+..++.|++.++.++|+.+
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~  118 (274)
T cd06609          40 EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG  118 (274)
T ss_pred             chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            445566889999999999999999999999999999999999999999998875 7899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~  146 (274)
T cd06609         119 KIHRDIKAANILLSEEGDVKLADFGVSG  146 (274)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccce
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.85  E-value=5.6e-21  Score=130.41  Aligned_cols=103  Identities=21%  Similarity=0.257  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+.+|+.+++.++|+||+++++.+...+..|+++||+. +++.+.+... ..+.+..+..++.|++.||.|+|+.+++
T Consensus        47 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~  125 (291)
T cd07870          47 PFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHIL  125 (291)
T ss_pred             cHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            3456789999999999999999999999999999999996 5777766543 3577888889999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       126 H~dlkp~Nil~~~~~~~~l~Dfg~~~  151 (291)
T cd07870         126 HRDLKPQNLLISYLGELKLADFGLAR  151 (291)
T ss_pred             cCCCChHHEEEcCCCcEEEecccccc
Confidence            9 999999999999999999999764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0986|consensus

Probab=99.85  E-value=1.9e-21  Score=136.56  Aligned_cols=117  Identities=25%  Similarity=0.238  Sum_probs=103.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...-..+|..+|+.++.+.||.+--+|++++..++|+..|+||+|.-++...+  .|++.....++.+++.||+++|+.+
T Consensus       228 ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~  307 (591)
T KOG0986|consen  228 GETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR  307 (591)
T ss_pred             hhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc
Confidence            34446789999999999999999999999999999999999999999998776  7999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      +++ |+||+|||+++.|.+.|+|+|++-   .+..-.+.+||+
T Consensus       308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~  350 (591)
T KOG0986|consen  308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTV  350 (591)
T ss_pred             eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcc
Confidence            999 999999999999999999999983   333334445553

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=1.1e-20  Score=128.87  Aligned_cols=105  Identities=24%  Similarity=0.199  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|++++.+.+.+.+++..++++||+++++|.+.+...+  .++...+..++.|++.|+.|+|+.+
T Consensus        43 ~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  122 (285)
T cd05632          43 GESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN  122 (285)
T ss_pred             HHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34557889999999999999999999999999999999999999998886543  5899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||+..
T Consensus       123 iiH~dikp~Nili~~~~~~kl~Dfg~~~  150 (285)
T cd05632         123 TVYRDLKPENILLDDYGHIRISDLGLAV  150 (285)
T ss_pred             eeecCCCHHHEEECCCCCEEEecCCcce
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.85  E-value=2e-20  Score=126.94  Aligned_cols=106  Identities=20%  Similarity=0.305  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++|||++++++.+......|+++||+.++++.+++... .++...+..++.+++.++.++|+.|
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06641          43 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK  121 (277)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCC
Confidence            345567889999999999999999999999999999999999999999988653 6889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       122 i~h~dl~p~Ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06641         122 KIHRDIKAANVLLSEHGEVKLADFGVAG  149 (277)
T ss_pred             eecCCCCHHhEEECCCCCEEEeecccce
Confidence            999 999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.7e-20  Score=126.61  Aligned_cols=108  Identities=19%  Similarity=0.256  Sum_probs=94.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe------eEEeeeccCCCChHHHHHhc------cCCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN------IYMFLEYVQGGDLKSKIEAC------VKLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~------~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~   76 (131)
                      .......+.+|+..++.++||||+++++.+.....      .++++||+++++|..++...      ..++...+..++.
T Consensus        41 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  120 (273)
T cd05035          41 TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMV  120 (273)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHH
Confidence            34456678999999999999999999998865543      68999999999999988543      2478888999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|+++++| |++|+||+++.++.++++|||++.
T Consensus       121 ~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  161 (273)
T cd05035         121 DIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK  161 (273)
T ss_pred             HHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence            9999999999999999 999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.85  E-value=1.5e-20  Score=126.27  Aligned_cols=105  Identities=19%  Similarity=0.281  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++.+......++++||+++++|.+++....  .++...+..++.|++.|+.|+|++|
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45678899999999999999999999999999999999999999999998633  5788999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||.+.
T Consensus       125 i~h~dl~~~nilv~~~~~~kl~d~g~~~  152 (261)
T cd05148         125 SIHRDLAARNILVGEDLVCKVADFGLAR  152 (261)
T ss_pred             eeccccCcceEEEcCCceEEEccccchh
Confidence            999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.85  E-value=9.9e-21  Score=127.52  Aligned_cols=105  Identities=16%  Similarity=0.228  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++++.+.+.+..++++||+++++|.+++...+.+++..+..++.|++.|+.++|++|++
T Consensus        46 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~  125 (268)
T cd06630          46 VVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQII  125 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45678999999999999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             c-cccccceEEecCC-eeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~-~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++ .++++|||...
T Consensus       126 H~~i~~~nil~~~~~~~~~l~dfg~~~  152 (268)
T cd06630         126 HRDVKGANLLIDSTGQRLRIADFGAAA  152 (268)
T ss_pred             cCCCCHHHEEEcCCCCEEEEccccccc
Confidence            9 9999999998765 69999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.85  E-value=3.2e-20  Score=124.35  Aligned_cols=107  Identities=32%  Similarity=0.404  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+++.++|||++++.+.+.. +...|+++|+++++++.+.+...  ..+++..+..++.+++.++.++|
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH  119 (257)
T cd08223          40 RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH  119 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455678899999999999999999998864 44679999999999999988763  35889999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++.++.++++|||++.
T Consensus       120 ~~~i~H~di~p~nil~~~~~~~~l~df~~~~  150 (257)
T cd08223         120 EKHILHRDLKTQNVFLTRTNIIKVGDLGIAR  150 (257)
T ss_pred             hCCeeccCCCchhEEEecCCcEEEecccceE
Confidence            999999 999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.85  E-value=1e-20  Score=129.02  Aligned_cols=105  Identities=19%  Similarity=0.255  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.+ .||||+.+++.+......++++||+++++|.+++.....+++..+..++.|++.++.++|+.|+
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  126 (290)
T cd05613          47 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGI  126 (290)
T ss_pred             HHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            446678899999999 5999999999999999999999999999999999887788999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       127 ~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613         127 IYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             eccCCCHHHeEECCCCCEEEeeCccce
Confidence            99 999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.85  E-value=2e-20  Score=126.08  Aligned_cols=106  Identities=25%  Similarity=0.303  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ...+.+.+|+.+++.++||||+++++.+.+.  ...++++|++++++|.+++.....++......++.|++.+|.++|++
T Consensus        46 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (265)
T cd06652          46 KEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN  125 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456788999999999999999999988764  46789999999999999998877788888999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||+|+||+++.++.++++|||.+.
T Consensus       126 ~i~H~dl~p~nil~~~~~~~~l~Dfg~~~  154 (265)
T cd06652         126 MIVHRDIKGANILRDSVGNVKLGDFGASK  154 (265)
T ss_pred             CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence            9999 999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.85  E-value=1.4e-20  Score=137.20  Aligned_cols=108  Identities=22%  Similarity=0.283  Sum_probs=95.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC--------eeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD--------NIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--------~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~   76 (131)
                      ++.....+.+|+..+..++|+|++++++.+...+        ..++++||+++|+|.+.+...    ..+++..+..++.
T Consensus        71 ~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~  150 (496)
T PTZ00283         71 SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFI  150 (496)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHH
Confidence            4556677889999999999999999988775432        368999999999999998753    2588899999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|+.+++| ||||+|||++.++.+|++|||++.
T Consensus       151 qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~  191 (496)
T PTZ00283        151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK  191 (496)
T ss_pred             HHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence            9999999999999999 999999999999999999999864

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.9e-20  Score=125.93  Aligned_cols=107  Identities=21%  Similarity=0.350  Sum_probs=97.4

Q ss_pred             cHHHHHHHHHHHHHHHcCC---CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS---HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.++   |||++++++.+......++++||+++++|.+++... .+++.....++.|++.++.++
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~l  117 (277)
T cd06917          39 PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYI  117 (277)
T ss_pred             CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHH
Confidence            4455667889999999986   999999999999999999999999999999988664 788899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|++| |++|+||+++.++.++++|||.+.
T Consensus       118 h~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06917         118 HKVGVIHRDIKAANILVTNTGNVKLCDFGVAA  149 (277)
T ss_pred             HhCCcccCCcCHHHEEEcCCCCEEEccCCcee
Confidence            9999999 999999999999999999998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.85  E-value=1.8e-20  Score=126.04  Aligned_cols=105  Identities=19%  Similarity=0.245  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++...  ..++...+..++.|++.|+.|+|+.+
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          44 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567889999999999999999999999999999999999999999999754  35788889999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       124 i~H~dl~p~nili~~~~~~~l~dfg~~~  151 (261)
T cd05072         124 YIHRDLRAANVLVSESLMCKIADFGLAR  151 (261)
T ss_pred             eeccccchhhEEecCCCcEEECCCccce
Confidence            999 999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=1e-20  Score=134.44  Aligned_cols=101  Identities=24%  Similarity=0.258  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ...+|+.+++.++||||+++++.+......++++|++. +++.+++.....++...+..++.|++.||.|+|++|++| |
T Consensus       132 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrD  210 (392)
T PHA03207        132 TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRD  210 (392)
T ss_pred             cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            35689999999999999999999999999999999985 589998877678999999999999999999999999999 9


Q ss_pred             ccccceEEecCCeeeccceeeee
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~  116 (131)
                      |||+|||++.++.++++|||++.
T Consensus       211 lkp~Nill~~~~~~~l~DfG~a~  233 (392)
T PHA03207        211 VKTENIFLDEPENAVLGDFGAAC  233 (392)
T ss_pred             CCHHHEEEcCCCCEEEccCcccc
Confidence            99999999999999999999764

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.4e-20  Score=129.91  Aligned_cols=105  Identities=27%  Similarity=0.366  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.+.||||+++++.+......|+++||+.+++|.+++...  ..+++.....++.|++.++.|+|+.|
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  123 (316)
T cd05574          44 KVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG  123 (316)
T ss_pred             HHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5566889999999999999999999999999999999999999999998764  35888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       124 i~H~dlkp~Nili~~~~~~~l~dfg~~~  151 (316)
T cd05574         124 IVYRDLKPENILLHESGHIMLSDFDLSK  151 (316)
T ss_pred             eeccCCChHHeEEcCCCCEEEeecchhh
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3.3e-20  Score=124.68  Aligned_cols=102  Identities=24%  Similarity=0.306  Sum_probs=91.6

Q ss_pred             HHHHHHHH-HcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          16 FANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        16 ~~~e~~~l-~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      +..|..++ ...+|||++++++.+...+..|+++||+++++|.+++.....++...+..++.|++.||.|+|+.+++| |
T Consensus        43 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d  122 (260)
T cd05611          43 VKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD  122 (260)
T ss_pred             HHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            44454444 455899999999999999999999999999999999988778899999999999999999999999999 9


Q ss_pred             ccccceEEecCCeeeccceeeeec
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~~  117 (131)
                      |+|+||+++.++.++++|||++..
T Consensus       123 l~p~nil~~~~~~~~l~dfg~~~~  146 (260)
T cd05611         123 IKPENLLIDQTGHLKLTDFGLSRN  146 (260)
T ss_pred             CCHHHeEECCCCcEEEeeccccee
Confidence            999999999999999999997653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.85  E-value=3.8e-20  Score=126.25  Aligned_cols=105  Identities=25%  Similarity=0.445  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++|||++++++.+...+..++++||+++++|.+++.. ..++...+..++.|++.++.++|++|+
T Consensus        58 ~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i  136 (285)
T cd06648          58 QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV  136 (285)
T ss_pred             hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3455688999999999999999999999999999999999999999999887 578889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||+..
T Consensus       137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~  163 (285)
T cd06648         137 IHRDIKSDSILLTSDGRVKLSDFGFCA  163 (285)
T ss_pred             ecCCCChhhEEEcCCCcEEEcccccch
Confidence            99 999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.85  E-value=2.9e-20  Score=127.95  Aligned_cols=107  Identities=21%  Similarity=0.240  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .+..+.+.+|+.+++.++|||++++.+.+.+.+..|+++||+.+ ++.+.+.. ...+++..+..++.|++.++.|+|++
T Consensus        56 ~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~  134 (307)
T cd06607          56 NEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH  134 (307)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456788999999999999999999999999999999999975 77777764 34688999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeeec
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +++| |++|+||+++.++.++++|||+...
T Consensus       135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~  164 (307)
T cd06607         135 ERIHRDIKAGNILLTEPGTVKLADFGSASL  164 (307)
T ss_pred             CceecCCCcccEEECCCCCEEEeecCccee
Confidence            9999 9999999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.85  E-value=1.9e-20  Score=126.44  Aligned_cols=108  Identities=19%  Similarity=0.234  Sum_probs=93.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhc------cCCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEAC------VKLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~   76 (131)
                      +....+.+.+|+.+++.++||||+++++.+...      ...++++||+++++|.+.+...      ..++...+..++.
T Consensus        40 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (272)
T cd05075          40 TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMT  119 (272)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHH
Confidence            345567789999999999999999999876432      2468999999999998887432      2478888999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|+++++| |+||+||+++.++.++++|||++.
T Consensus       120 ~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075         120 DIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             HHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            9999999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.85  E-value=8.4e-21  Score=132.43  Aligned_cols=103  Identities=23%  Similarity=0.379  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ..+.+.+|+.+++.++||||+++++++...      ...|++++++ ++++.+++.. ..++...+..++.|++.||.|+
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~L  134 (343)
T cd07878          57 HARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYI  134 (343)
T ss_pred             HHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Confidence            445677899999999999999999887543      3468999987 6799887764 3689999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.+|++|||++.
T Consensus       135 H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878         135 HSAGIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             HHCCeecccCChhhEEECCCCCEEEcCCccce
Confidence            9999999 999999999999999999999875

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.85  E-value=1.3e-20  Score=132.09  Aligned_cols=105  Identities=22%  Similarity=0.325  Sum_probs=91.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .....+.+.+|+.+++.++||||+++++.+....      ..|+++||+++ ++.+.+..  .++...+..++.|++.||
T Consensus        56 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL  132 (355)
T cd07874          56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  132 (355)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHH
Confidence            3445567888999999999999999999886543      46999999965 77776654  478888999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       133 ~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874         133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             HHHHhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence            9999999999 999999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=1.6e-20  Score=127.65  Aligned_cols=107  Identities=26%  Similarity=0.347  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+++++.++||||+++.+.+...+..++++||++++.+..+......++...+..++.|++.++.++|+++
T Consensus        41 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          41 EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33456788999999999999999999999999999999999998767666666567899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~  148 (288)
T cd07833         121 IIHRDIKPENILVSESGVLKLCDFGFAR  148 (288)
T ss_pred             eecCCCCHHHeEECCCCCEEEEeeeccc
Confidence            999 999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.85  E-value=2.8e-20  Score=125.77  Aligned_cols=104  Identities=25%  Similarity=0.334  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++|||++++++.+...+..++++||+++++|.+++...+.++...+..++.|++.++.++|+++++|
T Consensus        52 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H  131 (272)
T cd06629          52 VKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILH  131 (272)
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence            35678899999999999999999999999999999999999999999988778899999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++.++.++++|||++.
T Consensus       132 ~dl~~~nil~~~~~~~~l~d~~~~~  156 (272)
T cd06629         132 RDLKADNLLVDADGICKISDFGISK  156 (272)
T ss_pred             cCCChhhEEEcCCCeEEEeeccccc
Confidence             999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.85  E-value=2.9e-20  Score=124.60  Aligned_cols=107  Identities=28%  Similarity=0.374  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+.+|+.+++.++||||+++.+.+...+..++++||+++++|.+.+....  .+++..+..++.|++.++.++|+
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  119 (256)
T cd08218          40 PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD  119 (256)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4455678899999999999999999999999999999999999999999987643  47888999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| |++|+||+++.++.++++|||...
T Consensus       120 ~~i~h~~l~~~nil~~~~~~~~l~d~~~~~  149 (256)
T cd08218         120 RKILHRDIKSQNIFLTKDGTIKLGDFGIAR  149 (256)
T ss_pred             CCEecCCCCHHHEEEcCCCCEEEeecccee
Confidence            99999 999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.85  E-value=2.8e-20  Score=127.87  Aligned_cols=106  Identities=18%  Similarity=0.181  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ......+.+|+.+++.+.||||+++++.+... ..++++|++++|++.+.+.... .++...+..++.|++.|+.|+|++
T Consensus        50 ~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~  128 (303)
T cd05110          50 PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER  128 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            34445688999999999999999999988654 4678999999999999987654 578889999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||+|+||+++.++.+|++|||++.
T Consensus       129 ~ivH~dikp~Nill~~~~~~kL~Dfg~~~  157 (303)
T cd05110         129 RLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (303)
T ss_pred             CeeccccccceeeecCCCceEEccccccc
Confidence            9999 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=2e-20  Score=125.64  Aligned_cols=105  Identities=23%  Similarity=0.271  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|||++++++.+......++++|++++++|.+++....  .++...+..++.+++.|+.++|+++
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          44 SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34568899999999999999999999998889999999999999999997643  5888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||.+.
T Consensus       124 i~h~di~p~nili~~~~~~~l~d~g~~~  151 (261)
T cd05034         124 YIHRDLAARNILVGENLVCKIADFGLAR  151 (261)
T ss_pred             cccCCcchheEEEcCCCCEEECccccce
Confidence            999 999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.84  E-value=2.4e-20  Score=127.15  Aligned_cols=102  Identities=25%  Similarity=0.362  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHcC---CCCCceeEEEEEEe-----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSL---SHPNIVTLYESVLW-----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        14 ~~~~~e~~~l~~~---~h~~iv~l~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~   83 (131)
                      ..+.+|+.+++.+   +||||+++++.+..     ....++++|++. +++.+++....  .+++..+..++.|++.||.
T Consensus        46 ~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  124 (290)
T cd07862          46 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD  124 (290)
T ss_pred             HHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence            4456677777665   69999999998853     345899999996 58999887542  5788999999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++|++| ||||+|||++.++.++++|||++.
T Consensus       125 ~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862         125 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             HHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            999999999 999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=3.6e-20  Score=126.17  Aligned_cols=105  Identities=27%  Similarity=0.451  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|++.++.++|+|++++++.+...+..|+++||+++++|.+++.... .++......++.|++.++.++|+.|+
T Consensus        58 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi  137 (286)
T cd06614          58 NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV  137 (286)
T ss_pred             hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45678899999999999999999999999999999999999999999999876 78999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||+..
T Consensus       138 ~H~dl~p~ni~i~~~~~~~l~d~~~~~  164 (286)
T cd06614         138 IHRDIKSDNILLSKDGSVKLADFGFAA  164 (286)
T ss_pred             eeCCCChhhEEEcCCCCEEECccchhh
Confidence            99 999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.84  E-value=2.5e-20  Score=126.57  Aligned_cols=106  Identities=17%  Similarity=0.256  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++|||++++++.+......++++|++ +++|.+++... ..+++..+..++.|++.++.|+|+.
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  118 (286)
T cd07832          40 GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN  118 (286)
T ss_pred             chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344567889999999999999999999999999999999999 99999998754 4689999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||++.
T Consensus       119 ~i~H~dl~p~ni~~~~~~~~~l~dfg~~~  147 (286)
T cd07832         119 GIMHRDLKPANLLISADGVLKIADFGLAR  147 (286)
T ss_pred             CeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence            9999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=8.1e-20  Score=121.94  Aligned_cols=106  Identities=29%  Similarity=0.415  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+++++.++|||++++.+.+.+....++++|++++++|.+++.....+++.....++.|++.++.++|++|+
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i  120 (254)
T cd06627          41 EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV  120 (254)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            45677899999999999999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||.+.
T Consensus       121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~  147 (254)
T cd06627         121 IHRDIKAANILTTKDGVVKLADFGVAT  147 (254)
T ss_pred             ccCCCCHHHEEECCCCCEEEeccccce
Confidence            99 999999999999999999998764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=4.1e-20  Score=126.08  Aligned_cols=107  Identities=24%  Similarity=0.277  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ......+.+|+++++.++||||+++++.+...  +..++++||+++++|.+++..    ...++...+..++.|++.++.
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~  119 (287)
T cd06621          40 PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLS  119 (287)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence            34566789999999999999999999988654  368999999999999988764    234788889999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|+.+++| |++|+||+++.++.++++|||++.
T Consensus       120 ~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~  153 (287)
T cd06621         120 YLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG  153 (287)
T ss_pred             HHHHCCcccCCCCHHHEEEecCCeEEEeeccccc
Confidence            999999999 999999999999999999998764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.84  E-value=3.5e-20  Score=129.34  Aligned_cols=108  Identities=18%  Similarity=0.242  Sum_probs=93.8

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhc-----------------------
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEAC-----------------------   63 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~-----------------------   63 (131)
                      .....+.+.+|+.+++.+ .||||+++++.+... ...++++||+++++|.+.+...                       
T Consensus        50 ~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (337)
T cd05054          50 TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGK  129 (337)
T ss_pred             CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccc
Confidence            344456678899999999 799999999988654 4578999999999999988642                       


Q ss_pred             --------------------------------------cCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecC
Q psy2929          64 --------------------------------------VKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        64 --------------------------------------~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~  104 (131)
                                                            ..++...+..++.|++.|+.|+|++|++| ||||+||+++.+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~  209 (337)
T cd05054         130 KQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN  209 (337)
T ss_pred             ccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC
Confidence                                                  14677889999999999999999999999 999999999999


Q ss_pred             Ceeeccceeeee
Q psy2929         105 SILAGGKLYFIE  116 (131)
Q Consensus       105 ~~~kl~df~~~~  116 (131)
                      +.++++|||++.
T Consensus       210 ~~vkL~DfG~a~  221 (337)
T cd05054         210 NVVKICDFGLAR  221 (337)
T ss_pred             CcEEEeccccch
Confidence            999999999775

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.84  E-value=4e-20  Score=125.54  Aligned_cols=109  Identities=19%  Similarity=0.225  Sum_probs=96.9

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhc--------cCCCHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEAC--------VKLSEETCKCIVYQI   78 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~   78 (131)
                      .+....+.+.+|+.+++.+.|||++++++++.. ....+++++++++++|.+++...        ..++...+..++.|+
T Consensus        47 ~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i  126 (280)
T cd05043          47 ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQI  126 (280)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHH
Confidence            345567778999999999999999999998766 46788999999999999998754        247888999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+.|+|+++++| ||+|+||+++.++.++++|||++.
T Consensus       127 ~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~  165 (280)
T cd05043         127 ACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSR  165 (280)
T ss_pred             HHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence            99999999999999 999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.84  E-value=3.7e-20  Score=123.88  Aligned_cols=104  Identities=23%  Similarity=0.331  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+++++.++|||++++++.+......|+++|++.+++|.+++... ..+++..+..++.|++.++.++|+.+++
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~  121 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI  121 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            677899999999999999999999999999999999999999999999764 3689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       122 H~dl~~~ni~~~~~~~~~l~dfg~~~  147 (256)
T cd06612         122 HRDIKAGNILLNEEGQAKLADFGVSG  147 (256)
T ss_pred             cCCCCcceEEECCCCcEEEcccccch
Confidence            9 999999999999999999998765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.84  E-value=3.3e-20  Score=128.79  Aligned_cols=105  Identities=21%  Similarity=0.240  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+.+|+.+++.++||||+++++.+...+..++++|++.++++.+++....  .+++..+..++.|++.||.|+|+
T Consensus        40 ~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~  119 (328)
T cd08226          40 EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ  119 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3455778999999999999999999999999999999999999999999988643  58888999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      +|++| ||||+||+++.++.++++||+.
T Consensus       120 ~~ivHrDlkp~Nill~~~~~~~~~~~~~  147 (328)
T cd08226         120 NGYIHRNIKASHILISGDGLVSLSGLSH  147 (328)
T ss_pred             CCeecCCCCHHHEEEeCCCcEEEechHH
Confidence            99999 9999999999999999999853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.84  E-value=4.5e-20  Score=124.07  Aligned_cols=106  Identities=21%  Similarity=0.346  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+.+|+..++.++|+|++++++.+......|+++|+++++++.+++...   ..+++..+..++.|++.++.++|+
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~  120 (267)
T cd06610          41 TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS  120 (267)
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            35677899999999999999999999999999999999999999999999764   358889999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| |++|+||+++.++.++++|||++.
T Consensus       121 ~~i~h~~l~p~ni~~~~~~~~~l~df~~~~  150 (267)
T cd06610         121 NGQIHRDIKAGNILLGEDGSVKIADFGVSA  150 (267)
T ss_pred             CCeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence            99999 999999999999999999998753

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.84  E-value=3.7e-20  Score=126.48  Aligned_cols=103  Identities=30%  Similarity=0.395  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+|+.+++.++||||+++.+++...  +..|+++||+.+ +|.+++.... .+++...+.++.|++.||.|+|+++
T Consensus        48 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  126 (293)
T cd07843          48 PITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW  126 (293)
T ss_pred             hhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999877  789999999975 9999887654 5899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       127 i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843         127 ILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             eeeccCCHHHEEECCCCcEEEeecCcee
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.84  E-value=5.1e-20  Score=126.29  Aligned_cols=104  Identities=22%  Similarity=0.402  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++.+++.+......|+++||+++++|..++... .+++..+..++.+++.++.++|++|++
T Consensus        59 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~  137 (296)
T cd06655          59 KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVI  137 (296)
T ss_pred             hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            3566889999999999999999999999999999999999999999988754 688999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||+..
T Consensus       138 H~dL~p~Nili~~~~~~kl~dfg~~~  163 (296)
T cd06655         138 HRDIKSDNVLLGMDGSVKLTDFGFCA  163 (296)
T ss_pred             cCCCCHHHEEECCCCCEEEccCccch
Confidence            9 999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=5.2e-20  Score=124.08  Aligned_cols=107  Identities=26%  Similarity=0.358  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .+....+.+|+.+++.++||||+++++.+.+.  ...++++|++++++|.+.+...+.++......++.|++.++.++|+
T Consensus        45 ~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~  124 (264)
T cd06653          45 SKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS  124 (264)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34556788999999999999999999998764  4578999999999999999887778899999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| |++|+||+++.++.++++|||++.
T Consensus       125 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  154 (264)
T cd06653         125 NMIVHRDIKGANILRDSAGNVKLGDFGASK  154 (264)
T ss_pred             CCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence            99999 999999999999999999999774

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.84  E-value=5.8e-20  Score=122.68  Aligned_cols=107  Identities=34%  Similarity=0.484  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ....+.+.+|+++++.++|||++++.+.+...+..++++|++++++|.+.+...    ..++...+..++.+++.++.++
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  119 (258)
T cd08215          40 EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL  119 (258)
T ss_pred             hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHH
Confidence            356677899999999999999999999999999999999999999999999864    5689999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| |++|+||+++.++.++++|||++.
T Consensus       120 h~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~  151 (258)
T cd08215         120 HSRKILHRDIKPQNIFLTSNGLVKLGDFGISK  151 (258)
T ss_pred             HhCCEecccCChHHeEEcCCCcEEECCcccee
Confidence            9999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.84  E-value=7.7e-20  Score=122.55  Aligned_cols=104  Identities=19%  Similarity=0.258  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|||++++++.+... ..++++||+.+++|.+++....  .++......++.|++.|+.++|++|
T Consensus        42 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (254)
T cd05083          42 TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK  120 (254)
T ss_pred             hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            345788999999999999999999998654 4789999999999999997643  4788889999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       121 ~~H~dl~p~nili~~~~~~kl~Dfg~~~  148 (254)
T cd05083         121 LVHRDLAARNILVSEDGVAKVSDFGLAR  148 (254)
T ss_pred             eeccccCcceEEEcCCCcEEECCCccce
Confidence            999 999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.84  E-value=8.6e-20  Score=126.22  Aligned_cols=106  Identities=21%  Similarity=0.238  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .+..+.+.+|+.+++.++|||++++++.+..+...|+++||+.+ ++.+.+.. ..++++..+..++.+++.++.|+|++
T Consensus        66 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~  144 (317)
T cd06635          66 NEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH  144 (317)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456788999999999999999999999999999999999975 77777754 34688999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||+..
T Consensus       145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~  173 (317)
T cd06635         145 NMIHRDIKAGNILLTEPGQVKLADFGSAS  173 (317)
T ss_pred             CcccCCCCcccEEECCCCCEEEecCCCcc
Confidence            9999 999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.84  E-value=6e-20  Score=123.91  Aligned_cols=106  Identities=26%  Similarity=0.366  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      +..+.+.+|+.+++.++||||+++++.+...  ...++++|++++++|.+.+.....++....+.++.|++.++.++|++
T Consensus        46 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~  125 (266)
T cd06651          46 KEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN  125 (266)
T ss_pred             HHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456788999999999999999999988753  56789999999999999998877788999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||++.
T Consensus       126 ~i~H~~l~p~nil~~~~~~~~l~dfg~~~  154 (266)
T cd06651         126 MIVHRDIKGANILRDSAGNVKLGDFGASK  154 (266)
T ss_pred             CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence            9999 999999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.84  E-value=1.5e-20  Score=127.73  Aligned_cols=105  Identities=24%  Similarity=0.314  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+++++.++||||+++++.+...+..|+++||++++++.........++...+..++.|++.++.|+|+.+++
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  122 (286)
T cd07846          43 VKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNII  122 (286)
T ss_pred             hhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45567889999999999999999999999999999999999988888777666789999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       123 h~~l~p~ni~~~~~~~~~l~dfg~~~  148 (286)
T cd07846         123 HRDIKPENILVSQSGVVKLCDFGFAR  148 (286)
T ss_pred             ccCCCHHHEEECCCCcEEEEeeeeee
Confidence            9 999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.84  E-value=4.5e-20  Score=125.59  Aligned_cols=101  Identities=22%  Similarity=0.216  Sum_probs=90.4

Q ss_pred             HHHHHHHHHc---CCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          16 FANEVDNLKS---LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        16 ~~~e~~~l~~---~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ..+|..+++.   .+||+++.+++.+...+..++++||+++++|.+++...+.+++..+..++.|++.|+.|+|+.+++|
T Consensus        41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH  120 (279)
T cd05633          41 ALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY  120 (279)
T ss_pred             HHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence            3445444443   4799999999999999999999999999999999988778999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||+|+||+++.++.++++|||++.
T Consensus       121 ~dikp~Nil~~~~~~~~l~dfg~~~  145 (279)
T cd05633         121 RDLKPANILLDEHGHVRISDLGLAC  145 (279)
T ss_pred             CCCCHHHEEECCCCCEEEccCCcce
Confidence             999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.84  E-value=5e-20  Score=141.15  Aligned_cols=108  Identities=29%  Similarity=0.487  Sum_probs=93.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l   82 (131)
                      .......+..|+.+++.++||||+++++.|.+.  ...|+||||+++++|.+++...    ..+++..++.++.|++.||
T Consensus        52 ~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~AL  131 (1021)
T PTZ00266         52 KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHAL  131 (1021)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            445667789999999999999999999998654  5689999999999999998752    3689999999999999999


Q ss_pred             HHHHhc-------cccc-cccccceEEecC-----------------Ceeeccceeeee
Q psy2929          83 QYLHSL-------MSVN-QHKPRYIAWKVG-----------------SILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~-------~~~h-dlk~~nili~~~-----------------~~~kl~df~~~~  116 (131)
                      .|||+.       +++| ||||+|||++..                 +.+||+|||++.
T Consensus       132 aYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr  190 (1021)
T PTZ00266        132 AYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK  190 (1021)
T ss_pred             HHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccc
Confidence            999985       4999 999999999653                 348999999875

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.84  E-value=1.8e-20  Score=128.36  Aligned_cols=105  Identities=24%  Similarity=0.427  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++|||++++++.+...+..|+++||++++++.+++... .++...+..++.|++.++.|+|++++
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i  139 (292)
T cd06658          61 QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGV  139 (292)
T ss_pred             HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            44566889999999999999999999999999999999999999999987553 68889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       140 vH~dlkp~Nill~~~~~~kL~dfg~~~  166 (292)
T cd06658         140 IHRDIKSDSILLTSDGRIKLSDFGFCA  166 (292)
T ss_pred             eecCCCHHHEEEcCCCCEEEccCcchh
Confidence            99 999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.84  E-value=5.3e-20  Score=124.07  Aligned_cols=103  Identities=21%  Similarity=0.280  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++||||+++++.+. .+..++++||+++++|.+++...  ..++...+..++.|++.++.++|+.++
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (262)
T cd05071          45 PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY  123 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            356889999999999999999998874 45679999999999999999763  247888999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||.+.
T Consensus       124 ~H~dl~p~Nill~~~~~~~L~dfg~~~  150 (262)
T cd05071         124 VHRDLRAANILVGENLVCKVADFGLAR  150 (262)
T ss_pred             cccccCcccEEEcCCCcEEeccCCcee
Confidence            99 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.84  E-value=8e-20  Score=122.87  Aligned_cols=103  Identities=20%  Similarity=0.302  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++|||++++++.+. ....++++|++++++|.+++....  .++...+..++.|++.++.|+|++++
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05070          45 PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY  123 (260)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456889999999999999999998874 456899999999999999987643  47889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||++.
T Consensus       124 ~H~di~p~Nili~~~~~~~l~dfg~~~  150 (260)
T cd05070         124 IHRDLRSANILVGDGLVCKIADFGLAR  150 (260)
T ss_pred             ccCCCccceEEEeCCceEEeCCceeee
Confidence            99 999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.84  E-value=8.8e-21  Score=128.88  Aligned_cols=103  Identities=23%  Similarity=0.331  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+.+|+.+++.++|||++++++.+.+....++++||+.+ ++.+.+.. .+.+++..++.++.|++.|+.|+|+++++
T Consensus        43 ~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~  121 (284)
T cd07839          43 PSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVL  121 (284)
T ss_pred             ccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            34577899999999999999999999999999999999965 88887765 44689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       122 H~dl~~~nil~~~~~~~~l~dfg~~~  147 (284)
T cd07839         122 HRDLKPQNLLINKNGELKLADFGLAR  147 (284)
T ss_pred             cCCCCHHHEEEcCCCcEEECccchhh
Confidence            9 999999999999999999999765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.84  E-value=4e-20  Score=130.05  Aligned_cols=104  Identities=22%  Similarity=0.312  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ....+.+.+|+.+++.++||||+.+++.+...+      ..|++|||+.+ ++.+.+..  .++...+..++.|++.||.
T Consensus        64 ~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~  140 (364)
T cd07875          64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIK  140 (364)
T ss_pred             chhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHH
Confidence            345567889999999999999999999876443      46999999965 77777654  4788889999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++|++| ||||+||+++.++.+|++|||++.
T Consensus       141 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             HHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            999999999 999999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.84  E-value=8.2e-20  Score=123.30  Aligned_cols=107  Identities=22%  Similarity=0.209  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCC--CHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKL--SEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+.+... ...  +...+..++.|++.|+.|+|
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH  125 (268)
T cd06624          46 SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH  125 (268)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH
Confidence            345667899999999999999999999999999999999999999999998764 344  77888899999999999999


Q ss_pred             hccccc-cccccceEEec-CCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      ++|++| |++|+||+++. .+.++++|||...
T Consensus       126 ~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624         126 DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             HCCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            999999 99999999976 6799999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0604|consensus

Probab=99.84  E-value=1.7e-20  Score=126.15  Aligned_cols=107  Identities=23%  Similarity=0.363  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~   84 (131)
                      +.+..++|+++==.. .|||||++.+.|..    ...+.+|||.++||.|++.+..++.  |.+.....+++|+..|++|
T Consensus        97 Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~  176 (400)
T KOG0604|consen   97 DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRY  176 (400)
T ss_pred             cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHH
Confidence            456678888854444 69999999998864    4567899999999999999998774  9999999999999999999


Q ss_pred             HHhccccc-cccccceEEec---CCeeeccceeeeecc
Q psy2929          85 LHSLMSVN-QHKPRYIAWKV---GSILAGGKLYFIENR  118 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~---~~~~kl~df~~~~~~  118 (131)
                      ||+.+|.| |+||+|+|.+.   +..+|++||||+...
T Consensus       177 lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  177 LHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             HHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence            99999999 99999999975   456899999998643

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.84  E-value=3.6e-20  Score=127.88  Aligned_cols=102  Identities=25%  Similarity=0.398  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhc---------cCCCHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEAC---------VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l   82 (131)
                      ..+.+|+.+++.++||||+++++.+..  ....|+++|++.+ ++.+++...         ..++...+..++.|++.||
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  121 (317)
T cd07868          43 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  121 (317)
T ss_pred             HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHH
Confidence            457789999999999999999999864  4568899999854 888887532         1478888999999999999


Q ss_pred             HHHHhccccc-cccccceEEe----cCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWK----VGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~----~~~~~kl~df~~~~  116 (131)
                      .|+|++|++| ||||+|||+.    ..+.+|++|||++.
T Consensus       122 ~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            9999999999 9999999994    55789999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.83  E-value=1e-19  Score=125.64  Aligned_cols=106  Identities=22%  Similarity=0.245  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++|||++++++.+.+....|+++||+.+ ++.+.+... .+++...+..++.|++.++.|+|++|
T Consensus        63 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  141 (313)
T cd06633          63 EKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  141 (313)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4456788899999999999999999999999999999999965 777777653 36888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      ++| |++|+||+++.++.++++|||+...
T Consensus       142 i~H~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633         142 MIHRDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             eecCCCChhhEEECCCCCEEEeecCCCcc
Confidence            999 9999999999999999999987653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.83  E-value=1.1e-19  Score=121.31  Aligned_cols=106  Identities=32%  Similarity=0.384  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ...+.+.+|+.+++.++|||++++++.+...  ...++++|++++++|.+++.....++...+..++.|++.++.++|+.
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567789999999999999999999999988  88999999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++.++++|||...
T Consensus       121 ~~~h~dl~p~ni~i~~~~~~~l~d~~~~~  149 (260)
T cd06606         121 GIVHRDIKGANILVDSDGVVKLADFGCAK  149 (260)
T ss_pred             CccccCCCHHHEEEcCCCCEEEcccccEE
Confidence            9999 999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.83  E-value=2.4e-20  Score=128.02  Aligned_cols=104  Identities=26%  Similarity=0.435  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++++.+...+..|+++||++++++.+++.. ..+++..++.++.|++.|+.++|+++++
T Consensus        61 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iv  139 (297)
T cd06659          61 RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVI  139 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            445688999999999999999999999999999999999999999987765 3688999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||++.
T Consensus       140 H~dl~p~Nill~~~~~~kL~dfg~~~  165 (297)
T cd06659         140 HRDIKSDSILLTLDGRVKLSDFGFCA  165 (297)
T ss_pred             cCCCCHHHeEEccCCcEEEeechhHh
Confidence            9 999999999999999999999763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=4.9e-20  Score=134.55  Aligned_cols=104  Identities=21%  Similarity=0.201  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-----KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+|+.+++.++||||+++++++.+.+..|+++++.. +++.+++....     ......+..++.|++.||.|||
T Consensus       206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH  284 (501)
T PHA03210        206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH  284 (501)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            45568899999999999999999999999999999999985 47777765422     2334567789999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++.++.+||+|||++.
T Consensus       285 ~~gIiHrDLKP~NILl~~~~~vkL~DFGla~  315 (501)
T PHA03210        285 DKKLIHRDIKLENIFLNCDGKIVLGDFGTAM  315 (501)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEEEeCCCce
Confidence            999999 999999999999999999999874

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.83  E-value=6.9e-20  Score=122.59  Aligned_cols=108  Identities=30%  Similarity=0.415  Sum_probs=96.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+.+|+.+++.++|||++++++.+...+..++++|++++++|.+++....  .+++..+..++.+++.++.++|
T Consensus        39 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  118 (256)
T cd08220          39 TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH  118 (256)
T ss_pred             ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            34456778999999999999999999999999999999999999999999997643  4788999999999999999999


Q ss_pred             hccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      ++|++| |++|+||+++.+ +.++++|||...
T Consensus       119 ~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~  150 (256)
T cd08220         119 TKLILHRDLKTQNILLDKHKMVVKIGDFGISK  150 (256)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence            999999 999999999865 467999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.83  E-value=7.2e-20  Score=125.35  Aligned_cols=104  Identities=23%  Similarity=0.384  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++|||++++++.+......|+++||+++++|.+++... .++...+..++.|++.++.++|++|++
T Consensus        59 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~  137 (293)
T cd06647          59 KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVI  137 (293)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            4566889999999999999999999999999999999999999999998764 578888999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||+..
T Consensus       138 H~dL~p~Nili~~~~~~kL~dfg~~~  163 (293)
T cd06647         138 HRDIKSDNILLGMDGSVKLTDFGFCA  163 (293)
T ss_pred             eccCCHHHEEEcCCCCEEEccCccee
Confidence            9 999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.83  E-value=4.1e-20  Score=125.54  Aligned_cols=104  Identities=21%  Similarity=0.323  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+++.++|||++++++.+.+.+..++++||+++ ++.+++....   .+++.....++.|++.|+.|+|+.
T Consensus        41 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  119 (284)
T cd07836          41 TPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN  119 (284)
T ss_pred             chHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            345677899999999999999999999999999999999975 8888876543   588999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| |++|+||+++.++.++++|||...
T Consensus       120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~  148 (284)
T cd07836         120 RVLHRDLKPQNLLINKRGELKLADFGLAR  148 (284)
T ss_pred             CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence            9999 999999999999999999998764

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG4645|consensus

Probab=99.83  E-value=2.3e-21  Score=148.79  Aligned_cols=105  Identities=29%  Similarity=0.443  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|..++..++|||+|++|+.-.++...+++||||++|+|.+++...+..++.....+..|++.|+.|||+.||+
T Consensus      1277 ~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIV 1356 (1509)
T KOG4645|consen 1277 TFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIV 1356 (1509)
T ss_pred             cCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCce
Confidence            44457889999999999999999999999999999999999999999999877788888899999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |+||.||+++.+|-+|.+|||.+-
T Consensus      1357 HRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1357 HRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             ecCCCccceeeecCCcEEeeccccee
Confidence            9 999999999999999999999763

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.83  E-value=9.6e-20  Score=122.55  Aligned_cols=104  Identities=17%  Similarity=0.207  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|+|++++++.+.. ...++++||+++++|.+++....  ..+...+..++.|++.++.++|+.|
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          44 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45678899999999999999999999877 67899999999999999997643  4677888999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||.+.
T Consensus       123 i~H~dl~p~ni~i~~~~~~~l~d~~~~~  150 (260)
T cd05073         123 YIHRDLRAANILVSASLVCKIADFGLAR  150 (260)
T ss_pred             ccccccCcceEEEcCCCcEEECCCccee
Confidence            999 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.83  E-value=4.8e-20  Score=128.82  Aligned_cols=108  Identities=17%  Similarity=0.277  Sum_probs=92.1

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhcc----------------------
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACV----------------------   64 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~----------------------   64 (131)
                      .......+.+|+.+++.+ +||||+++++.+... ...++++||+++|+|.+++....                      
T Consensus        50 ~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (343)
T cd05103          50 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGD  129 (343)
T ss_pred             ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccc
Confidence            344556788999999999 689999999988655 45789999999999999886421                      


Q ss_pred             ---------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccc
Q psy2929          65 ---------------------------------------------KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRY   98 (131)
Q Consensus        65 ---------------------------------------------~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~n   98 (131)
                                                                   .++......++.|++.|+.|+|+++++| ||||+|
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N  209 (343)
T cd05103         130 ISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARN  209 (343)
T ss_pred             hhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCe
Confidence                                                         2456667789999999999999999999 999999


Q ss_pred             eEEecCCeeeccceeeee
Q psy2929          99 IAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        99 ili~~~~~~kl~df~~~~  116 (131)
                      |+++.++.++++|||++.
T Consensus       210 il~~~~~~~kl~dfg~~~  227 (343)
T cd05103         210 ILLSENNVVKICDFGLAR  227 (343)
T ss_pred             EEEcCCCcEEEEeccccc
Confidence            999999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=4.6e-20  Score=133.36  Aligned_cols=102  Identities=18%  Similarity=0.175  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ..+.+|+++++.++||||+++++.+...+..++++|++. +++..++... ..++...+..++.|++.||.|+|++|++|
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH  283 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIH  283 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence            346789999999999999999999999999999999995 5888888654 36899999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||||+|||++.++.++++|||++.
T Consensus       284 rDLKP~NILl~~~~~vkL~DFGla~  308 (461)
T PHA03211        284 RDIKTENVLVNGPEDICLGDFGAAC  308 (461)
T ss_pred             CcCCHHHEEECCCCCEEEcccCCce
Confidence             999999999999999999999864

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=4.2e-20  Score=129.80  Aligned_cols=100  Identities=20%  Similarity=0.191  Sum_probs=91.4

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ...|+.+++.++||||+++++.+......++++|++. +++.+++... ..+++..+..++.|++.||.|+|+.|++| |
T Consensus       104 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  182 (357)
T PHA03209        104 TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRD  182 (357)
T ss_pred             cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            4568999999999999999999999999999999995 5888887653 46899999999999999999999999999 9


Q ss_pred             ccccceEEecCCeeeccceeeee
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~  116 (131)
                      |||+|||++..+.++++|||++.
T Consensus       183 lkp~Nill~~~~~~kl~DfG~a~  205 (357)
T PHA03209        183 VKTENIFINDVDQVCIGDLGAAQ  205 (357)
T ss_pred             CCHHHEEECCCCCEEEecCcccc
Confidence            99999999999999999999764

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.83  E-value=1.2e-19  Score=122.16  Aligned_cols=103  Identities=19%  Similarity=0.254  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++|||++.+++.+. .+..+++|||+++++|.+++....  .++...+..++.|++.|+.|+|+.|+
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05069          45 PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY  123 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            456888999999999999999998874 456889999999999999997643  47888999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||++++++.++++|||.+.
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~  150 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLAR  150 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccce
Confidence            99 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.83  E-value=1.4e-19  Score=124.03  Aligned_cols=105  Identities=23%  Similarity=0.399  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .....+.+|+.+++.++|||++++++.+...+..++++||++++++.+++.. ..+++..+..++.|++.++.++|+.|+
T Consensus        59 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~gi  137 (292)
T cd06657          59 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGV  137 (292)
T ss_pred             hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456688999999999999999999999999999999999999999987754 368889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||+..
T Consensus       138 vH~dl~p~Nilv~~~~~~~l~dfg~~~  164 (292)
T cd06657         138 IHRDIKSDSILLTHDGRVKLSDFGFCA  164 (292)
T ss_pred             ecCCCCHHHEEECCCCCEEEcccccce
Confidence            99 999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.83  E-value=8.3e-20  Score=121.82  Aligned_cols=105  Identities=28%  Similarity=0.395  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|+.+++.++|||++++++.+...+..++++|++++++|.+++.....+++..+..++.|++.++.++|+.+++
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~  115 (250)
T cd05123          36 EVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGII  115 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            55678899999999999999999999999999999999999999999998877789999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||...
T Consensus       116 H~~l~p~ni~~~~~~~~~l~d~~~~~  141 (250)
T cd05123         116 YRDLKPENILLDADGHIKLTDFGLAK  141 (250)
T ss_pred             ecCCCcceEEEcCCCcEEEeecCcce
Confidence            9 999999999999999999998764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.83  E-value=1.9e-19  Score=120.70  Aligned_cols=108  Identities=28%  Similarity=0.481  Sum_probs=96.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l   82 (131)
                      .....+.+..|+.+++.++|||++++++.+..  ....|+++||+++++|.+++...    ..++...++.++.|++.++
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l  118 (265)
T cd08217          39 TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL  118 (265)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            45566778899999999999999999998764  34679999999999999998753    4688899999999999999


Q ss_pred             HHHH-----hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLH-----SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh-----~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++|     +.+++| |++|+||+++.++.++++|||++.
T Consensus       119 ~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~  158 (265)
T cd08217         119 YECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK  158 (265)
T ss_pred             HHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence            9999     899999 999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.83  E-value=2.1e-19  Score=123.83  Aligned_cols=107  Identities=21%  Similarity=0.269  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++|||++++.+++......|+++||+. +++.+.+... ..++...+..++.|++.++.|+|++
T Consensus        56 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~  134 (308)
T cd06634          56 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH  134 (308)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3445667889999999999999999999999999999999996 5887777543 3588899999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeeec
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +++| ||+|+||+++.++.++++|||++..
T Consensus       135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  164 (308)
T cd06634         135 NMIHRDVKAGNILLSEPGLVKLGDFGSASI  164 (308)
T ss_pred             CcccCCCCHHhEEECCCCcEEECCccccee
Confidence            9999 9999999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=1.3e-19  Score=130.58  Aligned_cols=101  Identities=21%  Similarity=0.234  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeC--------CeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHH
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWK--------DNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l   82 (131)
                      ...+|+.+++.++||||+++++++...        ...+++|||+++ ++.+.+..    ...++...+..++.|++.||
T Consensus       105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL  183 (440)
T PTZ00036        105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRAL  183 (440)
T ss_pred             hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            345799999999999999998887542        246789999975 77776653    33688899999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCC-eeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~-~~kl~df~~~~  116 (131)
                      .|||+.+++| ||||+|||++.++ .+|++|||++.
T Consensus       184 ~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        184 AYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             HHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            9999999999 9999999999665 69999999875

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.82  E-value=2.6e-19  Score=119.94  Aligned_cols=104  Identities=21%  Similarity=0.308  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+.+|+++++.+.|||++++++.+......++++||+++++|.+++... +.++++.+..++.|++.++.++|+.+++
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  122 (256)
T cd05112          43 EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI  122 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            345888999999999999999999999999999999999999999998764 3578899999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |++|+||+++.++.++++|||.+.
T Consensus       123 h~dl~p~ni~i~~~~~~~l~d~g~~~  148 (256)
T cd05112         123 HRDLAARNCLVGENQVVKVSDFGMTR  148 (256)
T ss_pred             ccccccceEEEcCCCeEEECCCccee
Confidence            9 999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.82  E-value=3.3e-20  Score=125.47  Aligned_cols=107  Identities=28%  Similarity=0.406  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|..+++.+. ||||+++++.+.+.+..+++||++++++|.+.+...+.++...++.++.|++.++.++|+.
T Consensus        42 ~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~  121 (280)
T cd05581          42 EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK  121 (280)
T ss_pred             hHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344567889999999998 9999999999999999999999999999999999877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| |++|+||+++.++.++++|||+..
T Consensus       122 ~~~H~dl~~~ni~i~~~~~~~l~df~~~~  150 (280)
T cd05581         122 GIIHRDLKPENILLDKDMHIKITDFGTAK  150 (280)
T ss_pred             CeeecCCCHHHeEECCCCCEEecCCcccc
Confidence            9999 999999999999999999998764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0667|consensus

Probab=99.82  E-value=4.8e-20  Score=133.43  Aligned_cols=106  Identities=23%  Similarity=0.231  Sum_probs=93.9

Q ss_pred             cHHHHHHHHHHHHHHHcCC-C-----CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-H-----PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAM   80 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h-----~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~   80 (131)
                      .+....+.+.|+.+|..++ |     -|+|+++++|..++-.|+|+|.+. .+|.++++...  +++...++.++.|++.
T Consensus       222 ~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~  300 (586)
T KOG0667|consen  222 KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILT  300 (586)
T ss_pred             ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            4455666788999999986 3     389999999999999999999994 59999999765  6899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecC--Ceeeccceeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVG--SILAGGKLYFI  115 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~--~~~kl~df~~~  115 (131)
                      +|.+||..+||| ||||+|||+...  ..+|++|||.+
T Consensus       301 ~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  301 ALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             HHHHHHhCCeeeccCChhheeeccCCcCceeEEecccc
Confidence            999999999999 999999999864  57899999865

>KOG0669|consensus

Probab=99.82  E-value=4.4e-21  Score=126.62  Aligned_cols=117  Identities=18%  Similarity=0.219  Sum_probs=99.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe--------CCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW--------KDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIA   79 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--------~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~   79 (131)
                      .........+|+++|+.++|+|++.+.+.+..        +..+|+|+++++. +|.-++... ..++...+..++.+++
T Consensus        56 KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm  134 (376)
T KOG0669|consen   56 KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLM  134 (376)
T ss_pred             ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHH
Confidence            34455667899999999999999998776642        3458999999977 888888766 4799999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccccCCCC
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVN  126 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~~~g  126 (131)
                      .||.|+|++.++| |+||.|+||+.+|.+|++|||++...+......+
T Consensus       135 ~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~k  182 (376)
T KOG0669|consen  135 NGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVK  182 (376)
T ss_pred             HHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCC
Confidence            9999999999999 9999999999999999999999876555544433

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.82  E-value=2.1e-19  Score=119.49  Aligned_cols=106  Identities=27%  Similarity=0.409  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+..++.++||+++++.+.+......++++|++++++|.+++... ..++...+..++.|++.++.++|+.|
T Consensus        39 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  118 (253)
T cd05122          39 EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG  118 (253)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            35677899999999999999999999999999999999999999999999876 47899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||...
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~  146 (253)
T cd05122         119 IIHRDIKAANILLTSDGEVKLIDFGLSA  146 (253)
T ss_pred             EecCCCCHHHEEEccCCeEEEeeccccc
Confidence            999 999999999999999999998764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0984|consensus

Probab=99.82  E-value=5.1e-20  Score=118.40  Aligned_cols=115  Identities=16%  Similarity=0.271  Sum_probs=98.1

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHH----hccCCCHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE----ACVKLSEETCKCIV   75 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~   75 (131)
                      +|.+......+.+.+..+|+.+..+. ..|++|.+|+.+......|++||.+.. +|..+-.    ..+..++..+-.++
T Consensus        76 vKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa  154 (282)
T KOG0984|consen   76 VKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIA  154 (282)
T ss_pred             EeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhH
Confidence            35555555667788889999987765 699999999999999999999999965 7755543    44568999999999


Q ss_pred             HHHHHHHHHHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          76 YQIAMALQYLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        76 ~~~~~~l~~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.||.|||++ .++| |+||+|||++.+|.+|+||||++.
T Consensus       155 ~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  155 VSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             HHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence            9999999999997 9999 999999999999999999998764

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.82  E-value=2.4e-19  Score=121.31  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=85.9

Q ss_pred             CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCC
Q psy2929          27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGS  105 (131)
Q Consensus        27 ~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~  105 (131)
                      +|||++++++.+...+..|+++||+++++|.+++.....+++..+..++.|++.|+.++|+.|++| ||+|+||+++.++
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  146 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK  146 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence            699999999999999999999999999999999988778999999999999999999999999999 9999999999998


Q ss_pred             -eeeccceeeee
Q psy2929         106 -ILAGGKLYFIE  116 (131)
Q Consensus       106 -~~kl~df~~~~  116 (131)
                       .++++|||++.
T Consensus       147 ~~~~l~dfg~~~  158 (267)
T PHA03390        147 DRIYLCDYGLCK  158 (267)
T ss_pred             CeEEEecCccce
Confidence             99999999765

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.82  E-value=1.2e-19  Score=121.53  Aligned_cols=106  Identities=25%  Similarity=0.373  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ...+.+.+|+.+++.++|||++++++.+...+..++++||+++++|.+++....  .+++.....++.|++.++.|+|++
T Consensus        41 ~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (257)
T cd08225          41 KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR  120 (257)
T ss_pred             hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            355678899999999999999999999999999999999999999999987643  478899999999999999999999


Q ss_pred             cccc-cccccceEEecCC-eeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~-~~kl~df~~~~  116 (131)
                      +++| |++|+||+++.++ .++++|||.+.
T Consensus       121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~  150 (257)
T cd08225         121 KILHRDIKSQNIFLSKNGMVAKLGDFGIAR  150 (257)
T ss_pred             CcccccCCHHHEEEcCCCCeEEecccccch
Confidence            9999 9999999999885 46999998664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0587|consensus

Probab=99.82  E-value=2.1e-19  Score=133.85  Aligned_cols=121  Identities=19%  Similarity=0.312  Sum_probs=105.3

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEe-----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLW-----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAM   80 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~   80 (131)
                      +....+.+..|..+++.. .|||++.+|++|.-     .+.+|||||||.+|+..++++...  .++++.+.++++..+.
T Consensus        55 ~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lr  134 (953)
T KOG0587|consen   55 TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILR  134 (953)
T ss_pred             CccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHH
Confidence            344556688889999987 59999999999974     457999999999999999998643  5899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      |+.++|.+.++| |+|-.|||++.++.+|+.|||...    ......+..||||
T Consensus       135 gl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~  188 (953)
T KOG0587|consen  135 GLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPY  188 (953)
T ss_pred             HHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcc
Confidence            999999999999 999999999999999999999875    4555566778887

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.82  E-value=3.4e-19  Score=121.18  Aligned_cols=96  Identities=20%  Similarity=0.227  Sum_probs=88.4

Q ss_pred             HHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccce
Q psy2929          21 DNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYI   99 (131)
Q Consensus        21 ~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~ni   99 (131)
                      ..++...||+++.+.+.+...+..++++||+.+++|.+++...+.+++..+..++.|++.|+.|+|+.+++| |++|+||
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~ni  128 (278)
T cd05606          49 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANI  128 (278)
T ss_pred             HHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHE
Confidence            344455799999999999999999999999999999999987778999999999999999999999999999 9999999


Q ss_pred             EEecCCeeeccceeeee
Q psy2929         100 AWKVGSILAGGKLYFIE  116 (131)
Q Consensus       100 li~~~~~~kl~df~~~~  116 (131)
                      +++.++.++++|||++.
T Consensus       129 li~~~~~~kl~dfg~~~  145 (278)
T cd05606         129 LLDEHGHVRISDLGLAC  145 (278)
T ss_pred             EECCCCCEEEccCcCcc
Confidence            99999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0695|consensus

Probab=99.82  E-value=2.2e-20  Score=127.83  Aligned_cols=129  Identities=22%  Similarity=0.291  Sum_probs=115.0

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~   77 (131)
                      ||++++.  .+.++....+.|..+..+- +||.+|-++.+|..+...|+|.||.+||+|.-.+.+..+++++-.+.+..+
T Consensus       280 mkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~e  359 (593)
T KOG0695|consen  280 MKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE  359 (593)
T ss_pred             hhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHH
Confidence            3555543  2555677788888888877 699999999999999999999999999999999998889999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++.||.|+|+.|+++ |+|.+|+|++..|.+|+.|.|...    ++...++++|||.
T Consensus       360 i~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpn  416 (593)
T KOG0695|consen  360 ICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPN  416 (593)
T ss_pred             HHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCc
Confidence            999999999999999 999999999999999999998764    6777888999994

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.82  E-value=9.1e-20  Score=123.91  Aligned_cols=104  Identities=22%  Similarity=0.368  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+|+++++.++||||+++++.+.+.+..++++||+. +++.+++...  ..+++..+..++.|++.|+.|+|+.+
T Consensus        42 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          42 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             cchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34568889999999999999999999999999999999996 5888888653  35788999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       121 i~H~~l~p~nill~~~~~~~l~dfg~~~  148 (284)
T cd07860         121 VLHRDLKPQNLLINTEGAIKLADFGLAR  148 (284)
T ss_pred             eecCCCCHHHEEECCCCCEEEeeccchh
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.4e-19  Score=120.19  Aligned_cols=105  Identities=21%  Similarity=0.330  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAM   80 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~   80 (131)
                      ..+.+.+|+.+++.+ .||||+++++.+....      ..|+++||+++++|.+++...    ..+++..+..++.|++.
T Consensus        45 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~  124 (275)
T cd06608          45 EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR  124 (275)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence            446788999999998 6999999999997644      489999999999999988652    36889999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|+|+.+++| |++|+||+++.++.++++|||++.
T Consensus       125 al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608         125 GLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             HHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence            999999999999 999999999999999999998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG4278|consensus

Probab=99.82  E-value=3.2e-20  Score=135.11  Aligned_cols=108  Identities=19%  Similarity=0.292  Sum_probs=100.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +....+.|+.|..+|+.++|||+|++.+.|..+.-+|+++|||..|+|.+++.+++  ..+...++.++.|+..|++||.
T Consensus       303 DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE  382 (1157)
T KOG4278|consen  303 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE  382 (1157)
T ss_pred             cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH
Confidence            33456789999999999999999999999999999999999999999999999876  3677788899999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++++| ||...|.|++.+..+|++|||++.
T Consensus       383 kknFIHRDLAARNCLVgEnhiVKvADFGLsR  413 (1157)
T KOG4278|consen  383 KKNFIHRDLAARNCLVGENHIVKVADFGLSR  413 (1157)
T ss_pred             HhhhhhhhhhhhhccccccceEEeeccchhh
Confidence            999999 999999999999999999999875

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.82  E-value=3.3e-19  Score=120.46  Aligned_cols=108  Identities=19%  Similarity=0.253  Sum_probs=92.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhcc------CCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACV------KLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~   76 (131)
                      +....+.+.+|+.+++.++|||++++++.+....      ..+++++|..++++..++....      .++......++.
T Consensus        41 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~  120 (273)
T cd05074          41 SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI  120 (273)
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            3455667889999999999999999999886532      2367889999999988775321      367888999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       121 ~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~  161 (273)
T cd05074         121 DIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK  161 (273)
T ss_pred             HHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccc
Confidence            9999999999999999 999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.82  E-value=3.2e-19  Score=121.91  Aligned_cols=104  Identities=24%  Similarity=0.332  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+|+.+++.++|||++++++++.+....|+++||++ +++.+.+....  .++...+..++.|++.||.++|+++
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         44 VPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             chHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34567889999999999999999999999999999999996 48888876544  3577888899999999999999999


Q ss_pred             ccc-cccccceEEec-CCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++. ++.+|++|||++.
T Consensus       123 i~H~dl~p~nill~~~~~~~kl~dfg~~~  151 (294)
T PLN00009        123 VLHRDLKPQNLLIDRRTNALKLADFGLAR  151 (294)
T ss_pred             eeCCCCCcceEEEECCCCEEEEccccccc
Confidence            999 99999999985 5678999999764

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.82  E-value=1.3e-19  Score=121.12  Aligned_cols=107  Identities=26%  Similarity=0.334  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ......+.+|+.+++.++||||+++.+.+......|+++|++++++|.+++..    ...+++..++.++.|++.|+.++
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l  119 (256)
T cd08530          40 QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL  119 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34556678899999999999999999999999999999999999999998876    23578889999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|++| |++|+||+++.++.++++|||++.
T Consensus       120 h~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~  151 (256)
T cd08530         120 HEQKILHRDLKSANILLVANDLVKIGDLGISK  151 (256)
T ss_pred             hhCCcccCCCCcceEEEecCCcEEEeeccchh
Confidence            9999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.82  E-value=1.2e-19  Score=123.76  Aligned_cols=105  Identities=20%  Similarity=0.254  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.+ +|||++.+.+.+......++++||+.+++|.+.+.....+++..+..++.|++.++.++|+.++
T Consensus        47 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~  126 (288)
T cd05583          47 TAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGI  126 (288)
T ss_pred             HHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            445678899999999 5999999999999999999999999999999998877778999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||++.
T Consensus       127 ~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583         127 IYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             eccCCCHHHeEECCCCCEEEEECcccc
Confidence            99 999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.82  E-value=4.6e-19  Score=119.72  Aligned_cols=105  Identities=21%  Similarity=0.288  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l   82 (131)
                      ....+.+|+.+++.+ +|||++++.+.+...      ...|+++||+.+++|.+++....  .+++..+..++.|++.++
T Consensus        45 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l  124 (272)
T cd06637          45 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  124 (272)
T ss_pred             cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            345678899999998 699999999998753      45899999999999999988643  588999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|+++++| |++|+||+++.++.++++|||++.
T Consensus       125 ~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637         125 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             HHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            9999999999 999999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0196|consensus

Probab=99.81  E-value=5.4e-20  Score=135.93  Aligned_cols=115  Identities=19%  Similarity=0.285  Sum_probs=105.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |-++.--.++.+..|+.|..+|.++.||||++|.|......-..++.|||++|+|..++.... .|..-.+.-+++.++.
T Consensus       663 KTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAs  742 (996)
T KOG0196|consen  663 KTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIAS  742 (996)
T ss_pred             eeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHH
Confidence            444444567888899999999999999999999999998888999999999999999998654 6888899999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++||-+.+++| ||...|||++.+-.||++|||+.+
T Consensus       743 GMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSR  779 (996)
T KOG0196|consen  743 GMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSR  779 (996)
T ss_pred             HhHHHhhcCchhhhhhhhheeeccceEEEecccccee
Confidence            999999999999 999999999999999999999985

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.81  E-value=7.7e-20  Score=126.82  Aligned_cols=106  Identities=25%  Similarity=0.345  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ....+.+.+|+.+++.++||||+++.+.+....     ..|++++|+.+ ++.+.+.....+++..++.++.|++.|+.+
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~  118 (330)
T cd07834          40 LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKY  118 (330)
T ss_pred             chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence            445667899999999999999999999988775     68999999974 899988877789999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       119 LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834         119 LHSANVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             HHhCCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            99999999 999999999999999999999775

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.81  E-value=2.1e-19  Score=121.92  Aligned_cols=104  Identities=33%  Similarity=0.410  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+++.++|||++++++.+...  +..++++||+++ ++.+++... ..+++...+.++.|++.|+.++|+.
T Consensus        41 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~  119 (287)
T cd07840          41 FPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN  119 (287)
T ss_pred             chHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            445678899999999999999999999988  789999999975 888888765 4789999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| |++|+||+++.++.++++|||+..
T Consensus       120 ~~~h~dl~p~nil~~~~~~~~l~d~g~~~  148 (287)
T cd07840         120 GILHRDIKGSNILINNDGVLKLADFGLAR  148 (287)
T ss_pred             CceeccCcHHHeEEcCCCCEEEcccccee
Confidence            9999 999999999999999999998765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.81  E-value=2.5e-19  Score=123.56  Aligned_cols=102  Identities=24%  Similarity=0.395  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhc---------cCCCHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEAC---------VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l   82 (131)
                      ..+.+|+.+++.++||||+++++.+..  +...++++||+.+ ++.+.+...         ..+++..+..++.|++.||
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (317)
T cd07867          43 MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI  121 (317)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH
Confidence            457789999999999999999999854  4578999999865 887777532         1377888999999999999


Q ss_pred             HHHHhccccc-cccccceEE----ecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAW----KVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili----~~~~~~kl~df~~~~  116 (131)
                      .|+|+.+++| ||||+||++    +..+.+|++|||++.
T Consensus       122 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            9999999999 999999999    456789999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.81  E-value=3.3e-19  Score=120.92  Aligned_cols=100  Identities=26%  Similarity=0.317  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHcCC-CCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          15 YFANEVDNLKSLS-HPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+|+..++.+. |||++++++.+.+.  +..++++||+++ ++.+.+... ..+++..+..++.|++.||.++|+.|+
T Consensus        43 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  121 (282)
T cd07831          43 NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI  121 (282)
T ss_pred             hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3457888888885 99999999999987  889999999975 888877653 468999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++. +.++++|||++.
T Consensus       122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~  147 (282)
T cd07831         122 FHRDIKPENILIKD-DILKLADFGSCR  147 (282)
T ss_pred             eecccCHHHEEEcC-CCeEEEeccccc
Confidence            99 99999999999 999999998764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.81  E-value=6e-20  Score=127.81  Aligned_cols=104  Identities=22%  Similarity=0.348  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.+|+.+++.++||||+++++.+..    ....++++||+. +++.+.+.....++...+..++.|++.||.|+|+
T Consensus        47 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  125 (334)
T cd07855          47 LAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHS  125 (334)
T ss_pred             chHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45667889999999999999999988753    346799999995 5899998877779999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| |++|+||+++.++.++++|||++.
T Consensus       126 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855         126 ANVIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEecccccce
Confidence            99999 999999999999999999999764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.81  E-value=5.7e-19  Score=120.13  Aligned_cols=104  Identities=22%  Similarity=0.303  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHcC-CCCCceeEEEEEE-----eCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSL-SHPNIVTLYESVL-----WKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        13 ~~~~~~e~~~l~~~-~h~~iv~l~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .+.+.+|+.+++.+ +|||++++++.+.     .....++++||+++++|.+++..    ...+++..+..++.|++.|+
T Consensus        58 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l  137 (286)
T cd06638          58 DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGL  137 (286)
T ss_pred             HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHH
Confidence            35677899999998 6999999999874     33568999999999999988753    23578888999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|+.+++| |++|+||+++.++.++++|||++.
T Consensus       138 ~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~  172 (286)
T cd06638         138 QHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA  172 (286)
T ss_pred             HHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence            9999999999 999999999999999999999764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.81  E-value=1.9e-19  Score=119.85  Aligned_cols=99  Identities=22%  Similarity=0.260  Sum_probs=89.8

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-ccc
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHK   95 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk   95 (131)
                      .+|...+....|||++++++.+...+..++++||+++++|.+.+.....+++..+..++.|++.|+.|+|+.|++| |++
T Consensus        33 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk  112 (237)
T cd05576          33 SRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLN  112 (237)
T ss_pred             hhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            3444455556799999999999999999999999999999999987777999999999999999999999999999 999


Q ss_pred             ccceEEecCCeeeccceeee
Q psy2929          96 PRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        96 ~~nili~~~~~~kl~df~~~  115 (131)
                      |+||+++.++.++++|||..
T Consensus       113 p~Nil~~~~~~~~l~df~~~  132 (237)
T cd05576         113 PNNILLDDRGHIQLTYFSRW  132 (237)
T ss_pred             HHHEEEcCCCCEEEecccch
Confidence            99999999999999999865

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.81  E-value=5.3e-19  Score=118.85  Aligned_cols=103  Identities=21%  Similarity=0.297  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++|||++++++.+ .++..++++|++++++|.+++....  .++......++.|++.++.++|+.|+
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i  123 (260)
T cd05067          45 PEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY  123 (260)
T ss_pred             HHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            45688999999999999999999886 4566899999999999999987533  57888899999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||...
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCccee
Confidence            99 999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0665|consensus

Probab=99.81  E-value=2.5e-20  Score=125.90  Aligned_cols=108  Identities=22%  Similarity=0.306  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ...++..+|...+..+.|+|+++++.+|..+.      ..|+|||++. .+|.+.+..  ..+..++..++.|.++|++|
T Consensus        57 ~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~--elDH~tis~i~yq~~~~ik~  133 (369)
T KOG0665|consen   57 THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM--ELDHETISYILYQMLCGIKH  133 (369)
T ss_pred             ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH--hcchHHHHHHHHHHHHHHHH
Confidence            34566788999999999999999999997665      3699999995 499998884  48889999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeeeccccc
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVR  121 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~  121 (131)
                      +|+.|++| ||||+||++..++.+|+.|||++......
T Consensus       134 lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen  134 LHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             HHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence            99999999 99999999999999999999988644433

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.81  E-value=4.2e-19  Score=123.51  Aligned_cols=101  Identities=23%  Similarity=0.328  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      .+.+|+.+++.++||||+.+++++...+..++++|++. +++.+.+.....++......++.|++.|+.++|+.|++| |
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~d  144 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRD  144 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            46789999999999999999999999999999999996 599999987777999999999999999999999999999 9


Q ss_pred             ccccceEEecCCeeeccceeeee
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|+||+++.++.++++|||...
T Consensus       145 l~~~nill~~~~~~kl~dfg~~~  167 (335)
T PTZ00024        145 LSPANIFINSKGICKIADFGLAR  167 (335)
T ss_pred             ccHHHeEECCCCCEEECCcccee
Confidence            99999999999999999998764

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.81  E-value=2.7e-19  Score=121.53  Aligned_cols=104  Identities=25%  Similarity=0.376  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++|||++++++.+.+.+..|+++||++ +++.+++....  .+++.....++.|++.+|.++|+++
T Consensus        41 ~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          41 VPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             chhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567889999999999999999999999999999999995 58999987765  6899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||++.
T Consensus       120 ~~H~dl~p~nil~~~~~~~~l~df~~~~  147 (283)
T cd07835         120 VLHRDLKPQNLLIDREGALKLADFGLAR  147 (283)
T ss_pred             eeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.81  E-value=4.4e-19  Score=120.41  Aligned_cols=103  Identities=19%  Similarity=0.320  Sum_probs=88.6

Q ss_pred             HHHHHHHHHH-HHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          13 RKYFANEVDN-LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        13 ~~~~~~e~~~-l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+..|... ++...|||++++++.+..++..|+++||++ ++|.+++...    ..+++..++.++.|++.|+.|+|+
T Consensus        43 ~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  121 (283)
T cd06617          43 QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS  121 (283)
T ss_pred             HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3445555554 666789999999999999999999999996 5888777542    258899999999999999999999


Q ss_pred             c-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 L-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      + +++| |++|+||+++.++.+|++|||.+.
T Consensus       122 ~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~  152 (283)
T cd06617         122 KLSVIHRDVKPSNVLINRNGQVKLCDFGISG  152 (283)
T ss_pred             cCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            8 9999 999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.81  E-value=1.7e-19  Score=123.51  Aligned_cols=104  Identities=26%  Similarity=0.292  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC----------eeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD----------NIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~----------~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      ....+.+|+.+++.++|||++++++.+.+..          ..++++||+++ ++...+... ..++...+..++.|++.
T Consensus        49 ~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~  127 (302)
T cd07864          49 FPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLE  127 (302)
T ss_pred             chHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            3456778999999999999999999987654          78999999976 777777654 36899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|||++|++| |++|+||+++.++.++++|||++.
T Consensus       128 aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~  164 (302)
T cd07864         128 GLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR  164 (302)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence            999999999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.81  E-value=2.8e-19  Score=121.76  Aligned_cols=101  Identities=28%  Similarity=0.350  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHcC---CCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHH
Q psy2929          15 YFANEVDNLKSL---SHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        15 ~~~~e~~~l~~~---~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ...+|+.+++.+   +||||+++++.+...     ...++++|++.+ ++.+++....  .++...+..++.|++.|+.|
T Consensus        45 ~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  123 (288)
T cd07863          45 STVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDF  123 (288)
T ss_pred             HHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            455677766655   799999999988642     357899999975 8888887643  48899999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       124 lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863         124 LHANCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            99999999 999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.80  E-value=3.5e-19  Score=124.08  Aligned_cols=104  Identities=21%  Similarity=0.320  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+|+.+++.++||||+++++.+....     ..|+++|++.+ ++...+.. ..+++..+..++.|++.||.++
T Consensus        45 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~L  122 (336)
T cd07849          45 TFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYI  122 (336)
T ss_pred             hhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Confidence            34556788999999999999999998876543     47999999965 88877754 3689999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|++| ||+|+||+++.++.++++|||++.
T Consensus       123 H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849         123 HSANVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             HhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence            9999999 999999999999999999999764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.80  E-value=1.1e-18  Score=119.15  Aligned_cols=104  Identities=23%  Similarity=0.331  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHcC-CCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSL-SHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        13 ~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .+.+.+|+.+++.+ +|||++++++.+...+     ..|+++||+++++|.+++..    ...+++..++.++.|++.++
T Consensus        62 ~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  141 (291)
T cd06639          62 DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGL  141 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence            45677899999988 7999999999987543     57999999999999998863    23688999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++|+.+++| ||+|+||+++.++.++++|||+..
T Consensus       142 ~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~  176 (291)
T cd06639         142 QHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA  176 (291)
T ss_pred             HHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence            9999999999 999999999999999999998764

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.80  E-value=4.4e-19  Score=121.72  Aligned_cols=102  Identities=22%  Similarity=0.251  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCC--------eeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKD--------NIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--------~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ..+.+|+.+++.++||||+++++.+....        ..++++||+.+ ++.+.+.... .+++..+..++.|++.|+.|
T Consensus        56 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~  134 (310)
T cd07865          56 ITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY  134 (310)
T ss_pred             hHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            34568999999999999999999886543        45999999965 8888776543 68999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++|++| |++|+||+++.++.++++|||++.
T Consensus       135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  167 (310)
T cd07865         135 IHRNKILHRDMKAANILITKDGILKLADFGLAR  167 (310)
T ss_pred             HHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence            99999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.80  E-value=6.7e-19  Score=121.19  Aligned_cols=104  Identities=26%  Similarity=0.391  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-----cCCCHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-----VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+.  ...++++|++++ ++.+.+...     ..+++..+..++.|++.|+.|
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  123 (316)
T cd07842          45 ISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHY  123 (316)
T ss_pred             ccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHH
Confidence            345678899999999999999999999988  789999999965 777776532     257889999999999999999


Q ss_pred             HHhccccc-cccccceEEec----CCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKV----GSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~----~~~~kl~df~~~~  116 (131)
                      +|+.+++| ||+|+||+++.    ++.+|++|||++.
T Consensus       124 lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842         124 LHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             HHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence            99999999 99999999999    9999999999765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.80  E-value=1.8e-19  Score=122.31  Aligned_cols=102  Identities=26%  Similarity=0.373  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....+|+..++.++ |||++++++.+...+..++++|++ ++++.+.+....  .++...+..++.|++.++.|+|++++
T Consensus        42 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i  120 (283)
T cd07830          42 CMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF  120 (283)
T ss_pred             HHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34567899999998 999999999999999999999999 779999888754  68999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||+..
T Consensus       121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~  147 (283)
T cd07830         121 FHRDLKPENLLVSGPEVVKIADFGLAR  147 (283)
T ss_pred             ccCCCChhhEEEcCCCCEEEeecccce
Confidence            99 999999999999999999998764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.80  E-value=5.9e-19  Score=123.69  Aligned_cols=104  Identities=22%  Similarity=0.282  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ......+.+|+.+++.++||||+++++.+....      ..|+++||+.+ ++.+.+...  ++...+..++.|++.||.
T Consensus        56 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~  132 (353)
T cd07850          56 VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIK  132 (353)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHH
Confidence            344556778999999999999999999886543      46999999965 888887654  888899999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++|++| ||+|+||+++.++.++++|||++.
T Consensus       133 ~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850         133 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             HHHhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence            999999999 999999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG4257|consensus

Probab=99.80  E-value=4.4e-19  Score=129.03  Aligned_cols=108  Identities=20%  Similarity=0.296  Sum_probs=99.3

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      -.+.+.+.|..|..+|+.++||+|+++.|.+... -.|+|||.++.|.|..++.... .++..++..++.|++.+|.|+|
T Consensus       430 ~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe  508 (974)
T KOG4257|consen  430 CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE  508 (974)
T ss_pred             CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence            4566789999999999999999999999999654 4899999999999999998654 6888999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +..++| ||...|||+....-+|++|||+++
T Consensus       509 SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR  539 (974)
T KOG4257|consen  509 SKRFVHRDIAARNILVSSPQCVKLADFGLSR  539 (974)
T ss_pred             hhchhhhhhhhhheeecCcceeeecccchhh
Confidence            999999 999999999999999999999874

>PRK10345 hypothetical protein; Provisional

Probab=99.80  E-value=6.7e-19  Score=115.45  Aligned_cols=98  Identities=20%  Similarity=0.222  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHcC-----CCCCceeEEEEEEeCC---eeE-Eeeec--cCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-----SHPNIVTLYESVLWKD---NIY-MFLEY--VQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-----~h~~iv~l~~~~~~~~---~~~-lv~e~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      ..+.+.+|+.+++.+     .||||+++++++.++.   ..+ +++||  ..+++|.+++... .++++  ..++.+++.
T Consensus        39 ~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~  115 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLK  115 (210)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHH
Confidence            456789999999999     5799999999999874   434 78999  5578999999764 45555  356778887


Q ss_pred             HH-HHHHhccccc-cccccceEEecC----Ceeeccce
Q psy2929          81 AL-QYLHSLMSVN-QHKPRYIAWKVG----SILAGGKL  112 (131)
Q Consensus        81 ~l-~~lh~~~~~h-dlk~~nili~~~----~~~kl~df  112 (131)
                      ++ +|+|+++++| ||||+|||++..    +.++++|+
T Consensus       116 ~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345        116 KLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             HHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            77 8999999999 999999999743    37999994

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.80  E-value=6.3e-19  Score=121.36  Aligned_cols=101  Identities=31%  Similarity=0.442  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+|+.+++.++|+|++++++.+...  +..++++||+.+ ++.+++... ..+++..+..++.|++.++.|+|+.|++
T Consensus        52 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  130 (309)
T cd07845          52 SSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII  130 (309)
T ss_pred             hhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456799999999999999999998765  468999999965 888888753 4689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||.+.
T Consensus       131 H~dl~p~nil~~~~~~~kL~dfg~~~  156 (309)
T cd07845         131 HRDLKVSNLLLTDKGCLKIADFGLAR  156 (309)
T ss_pred             cCCCCHHHEEECCCCCEEECccceee
Confidence            9 999999999999999999999775

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0666|consensus

Probab=99.80  E-value=1.2e-19  Score=122.85  Aligned_cols=103  Identities=24%  Similarity=0.362  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACV-----KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....-||+.+++.++|||++.+...+.. +...|+++||++. +|..+++.+.     .++...+..++-|++.|+.|||
T Consensus        71 S~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH  149 (438)
T KOG0666|consen   71 SMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH  149 (438)
T ss_pred             CHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh
Confidence            3457789999999999999999999887 7789999999987 9999997543     4788889999999999999999


Q ss_pred             hccccc-cccccceEEecC----Ceeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVG----SILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~----~~~kl~df~~~~  116 (131)
                      ++=++| |+||.|||+..+    |.+||+|+|++.
T Consensus       150 ~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR  184 (438)
T KOG0666|consen  150 SNWVLHRDLKPANILVMGDGPERGRVKIADLGLAR  184 (438)
T ss_pred             hhheeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence            999999 999999999887    999999999874

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=8.5e-19  Score=122.55  Aligned_cols=105  Identities=24%  Similarity=0.331  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ....+.+.+|+.+++.++||||+++.+.+....      .++++++++ ++++.+++.. ..++...++.++.|++.|+.
T Consensus        55 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~  132 (343)
T cd07880          55 ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLK  132 (343)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence            334556889999999999999999999987553      358999998 6699888765 36889999999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       133 ~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~  166 (343)
T cd07880         133 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR  166 (343)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence            999999999 999999999999999999999774

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.79  E-value=1.5e-18  Score=121.34  Aligned_cols=103  Identities=23%  Similarity=0.380  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ..+.+.+|+.+++.++||||+++++.+...      ...|++++++ ++++.+.+... .+++..+..++.|++.|+.|+
T Consensus        59 ~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~L  136 (345)
T cd07877          59 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYI  136 (345)
T ss_pred             HHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            456678899999999999999999988643      2367888876 77998877654 688999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|++| |++|+||+++.++.++++|||++.
T Consensus       137 H~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~  168 (345)
T cd07877         137 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR  168 (345)
T ss_pred             HHCCeeecCCChHHEEEcCCCCEEEecccccc
Confidence            9999999 999999999999999999999865

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.79  E-value=1.1e-18  Score=121.54  Aligned_cols=104  Identities=28%  Similarity=0.420  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+|+.+++.+ +||||+++++.+...+  ..|+++|++.+ +|.+.+... .+++.....++.|++.||.++|+
T Consensus        48 ~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~  125 (337)
T cd07852          48 TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHS  125 (337)
T ss_pred             hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3445677899999999 9999999999886543  57999999975 998888765 77888888999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| |++|+||+++.++.++++|||++.
T Consensus       126 ~~i~H~dl~p~nill~~~~~~kl~d~g~~~  155 (337)
T cd07852         126 GNVIHRDLKPSNILLNSDCRVKLADFGLAR  155 (337)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence            99999 999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.79  E-value=6.6e-19  Score=122.77  Aligned_cols=104  Identities=22%  Similarity=0.397  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+|+.+++.++||||+++++.+....     ..|+++||+. ++|.+.+...+.++...+..++.|++.|+.++|
T Consensus        47 ~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  125 (337)
T cd07858          47 DAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH  125 (337)
T ss_pred             hhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999998876542     4799999995 589999887778999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++++| |++|+||+++.++.++++|||++.
T Consensus       126 ~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858         126 SANVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            999999 999999999999999999999765

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1152|consensus

Probab=99.79  E-value=9.9e-20  Score=131.07  Aligned_cols=100  Identities=23%  Similarity=0.197  Sum_probs=92.9

Q ss_pred             HHHHHHHHHcCC---CCCceeEEEEEEeCCeeEEeeeccC-CCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          16 FANEVDNLKSLS---HPNIVTLYESVLWKDNIYMFLEYVQ-GGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        16 ~~~e~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .-.|+++|..++   |+||+++.+.|++++++|+.+|... |-+|++++..+..++++....+.+|+..|+.+||+.||+
T Consensus       613 Vp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~iv  692 (772)
T KOG1152|consen  613 VPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIV  692 (772)
T ss_pred             cchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCce
Confidence            345999999996   9999999999999999999999654 458999999998999999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      | |||-+|+.++.+|.+|++|||-+
T Consensus       693 hrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  693 HRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             ecccccccEEEecCCeEEEeeccch
Confidence            9 99999999999999999999854

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=5.7e-19  Score=123.90  Aligned_cols=95  Identities=17%  Similarity=0.091  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCcee-EEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVT-LYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~-l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+++++.++|+|++. +++.    +..|++|||++|++|... .   ...   ...++.+++.+|.++|+.|
T Consensus        63 ~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~---~~~---~~~~~~~i~~aL~~lH~~g  131 (365)
T PRK09188         63 LARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHLA-R---PHG---DPAWFRSAHRALRDLHRAG  131 (365)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHHh-C---ccc---hHHHHHHHHHHHHHHHHCC
Confidence            34667999999999999999884 5442    457999999999888632 1   111   1457889999999999999


Q ss_pred             ccc-cc-cccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QH-KPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dl-k~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| || ||+|||++.++.++++|||++.
T Consensus       132 IiHrDL~KP~NILv~~~~~ikLiDFGlA~  160 (365)
T PRK09188        132 ITHNDLAKPQNWLMGPDGEAAVIDFQLAS  160 (365)
T ss_pred             CeeCCCCCcceEEEcCCCCEEEEECccce
Confidence            999 99 9999999999999999999875

>KOG0696|consensus

Probab=99.79  E-value=2.3e-20  Score=130.44  Aligned_cols=129  Identities=20%  Similarity=0.238  Sum_probs=111.3

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~   77 (131)
                      ||++++.  ....+.+-...|-++|... +.|.+++++.+|..-+.+|+||||+.||+|.-.+..-+.|.++....++.+
T Consensus       379 iKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaE  458 (683)
T KOG0696|consen  379 IKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAE  458 (683)
T ss_pred             hhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHH
Confidence            4555532  2333445566788888877 588999999999999999999999999999999999889999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++-||-+||++||++ |+|.+|++++.+|.+||+|||...    .+....+++|||-
T Consensus       459 iaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPd  515 (683)
T KOG0696|consen  459 IAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPD  515 (683)
T ss_pred             HHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCc
Confidence            999999999999999 999999999999999999999875    5566678899984

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.79  E-value=2.4e-18  Score=116.12  Aligned_cols=106  Identities=25%  Similarity=0.407  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHHc-CCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~-~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+..|+.++.. ++|||++++++.+...+..++++||++++++.+++..    ...++...++.++.|++.++.++
T Consensus        50 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  129 (269)
T cd08528          50 KSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYL  129 (269)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHh
Confidence            345567788888875 7899999999999999999999999999999988743    23588899999999999999999


Q ss_pred             Hh-ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HS-LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~-~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+ .+++| |++|+||+++.++.++++|||.+.
T Consensus       130 h~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~  162 (269)
T cd08528         130 HKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAK  162 (269)
T ss_pred             ccCCceeecCCCHHHEEECCCCcEEEeccccee
Confidence            96 68999 999999999999999999999774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.79  E-value=3.1e-18  Score=116.34  Aligned_cols=106  Identities=18%  Similarity=0.268  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEe------CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLW------KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMA   81 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (131)
                      .....+..|+.+++.+ +|||++++++.+..      .+..|++|||+.+++|.+++....  .+++..+..++.|++.+
T Consensus        54 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a  133 (282)
T cd06636          54 DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG  133 (282)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHH
Confidence            3445688899999988 69999999999853      457899999999999999987643  47788889999999999


Q ss_pred             HHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+|+.+++| |++|+||+++.++.++++|||++.
T Consensus       134 l~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636         134 LAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             HHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            99999999999 999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.79  E-value=1.3e-18  Score=118.82  Aligned_cols=103  Identities=22%  Similarity=0.286  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHcCC-CCCceeEEEEEEeCCe-----eEEeeeccCCCChHHHHHhc-----cCCCHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSLS-HPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEAC-----VKLSEETCKCIVYQIAMA   81 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~   81 (131)
                      ...+.+|+.+++.+. ||||+++++.+...+.     .|+++||+++ ++.+++...     ..+++..++.++.|++.|
T Consensus        44 ~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  122 (295)
T cd07837          44 PPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG  122 (295)
T ss_pred             chHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence            356788999999995 6999999999987665     8999999976 888887643     247899999999999999


Q ss_pred             HHHHHhccccc-cccccceEEec-CCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      |.|+|+++++| |++|+||+++. ++.++++|||++.
T Consensus       123 L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837         123 VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             HHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            99999999999 99999999998 8999999998764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.79  E-value=4.2e-19  Score=120.28  Aligned_cols=105  Identities=29%  Similarity=0.390  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++|||++++++.+...+..++++|++++ +|.+++... ..++......++.|++.++.++|++|
T Consensus        40 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          40 GIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             cccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3445677899999999999999999999999999999999974 999999876 47899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||+..
T Consensus       119 i~H~~l~~~ni~~~~~~~~~l~d~g~~~  146 (282)
T cd07829         119 ILHRDLKPQNILINRDGVLKLADFGLAR  146 (282)
T ss_pred             cccCCCChheEEEcCCCCEEEecCCccc
Confidence            999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.78  E-value=7.8e-19  Score=119.03  Aligned_cols=105  Identities=26%  Similarity=0.376  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .....+.+|+.+++.++||+++++++.+.+++..++++||+++ ++.+.+... ..+++..+..++.|++.++.++|+++
T Consensus        40 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          40 GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456788899999999999999999999999999999999975 888887764 47899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||...
T Consensus       119 i~H~dl~p~nili~~~~~~~l~df~~~~  146 (283)
T cd05118         119 ILHRDLKPENLLINTEGVLKLADFGLAR  146 (283)
T ss_pred             eeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence            999 999999999999999999998775

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0596|consensus

Probab=99.78  E-value=2.4e-18  Score=123.41  Aligned_cols=113  Identities=21%  Similarity=0.195  Sum_probs=98.3

Q ss_pred             ccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC-CCHHHHHHHHHHHHHHHH
Q psy2929           6 NALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQIAMALQ   83 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~   83 (131)
                      ...+.+....+.+|+.+|..+. |.+|++++++-..++++|+|||+=+ -+|...+..... .....++.++.|++.++.
T Consensus       396 ~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~  474 (677)
T KOG0596|consen  396 LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVK  474 (677)
T ss_pred             hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHH
Confidence            4567888899999999999995 9999999999999999999999764 499999987654 343588999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeeecccc
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQV  120 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~  120 (131)
                      ++|..|||| ||||.|+|+ -.|.+|++|||++.....
T Consensus       475 ~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  475 TIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQP  511 (677)
T ss_pred             HHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCc
Confidence            999999999 999999987 568999999999864433

>KOG0668|consensus

Probab=99.78  E-value=3.4e-19  Score=116.33  Aligned_cols=112  Identities=25%  Similarity=0.325  Sum_probs=96.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCe--eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~--~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      |.+.+...+...+.+.||+.+|+.++ ||||+++++...++.+  -.+++|++++.+...+..   .++...+..++.++
T Consensus        65 K~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~---tl~d~dIryY~~el  141 (338)
T KOG0668|consen   65 KCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYEL  141 (338)
T ss_pred             eEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh---hhchhhHHHHHHHH
Confidence            44556677888889999999999996 9999999999987654  579999998866655433   37778899999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      +.||.|||+.|+.| |+||.|++|+.. -.++++|.|+++
T Consensus       142 LkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  142 LKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE  181 (338)
T ss_pred             HHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHh
Confidence            99999999999999 999999999965 678999999885

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.78  E-value=2.9e-18  Score=116.83  Aligned_cols=106  Identities=18%  Similarity=0.215  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHH-----hccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE-----ACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ......+.+|+.++..+. ||||+++++.+..+...++++|++.. ++.++..     ....+++..+..++.|++.|+.
T Consensus        43 ~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~  121 (288)
T cd06616          43 EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALN  121 (288)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence            345667889999999996 99999999999999999999999854 6555432     2246889999999999999999


Q ss_pred             HHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|+. +++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616         122 YLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             HHhhcCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence            99985 9999 999999999999999999999763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.78  E-value=2.2e-18  Score=119.86  Aligned_cols=104  Identities=23%  Similarity=0.360  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeC----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWK----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+.+|+.+++.+ .||||+++++.....    ...|++++++. ++|.+.+.....++...+..++.|++.||.|+|
T Consensus        44 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH  122 (332)
T cd07857          44 LAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH  122 (332)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            355678899999999 599999999875432    34688889885 599999887778999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++.++.++++|||++.
T Consensus       123 ~~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857         123 SANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            999999 999999999999999999999764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG2052|consensus

Probab=99.78  E-value=8e-19  Score=122.96  Aligned_cols=110  Identities=15%  Similarity=0.208  Sum_probs=99.1

Q ss_pred             cccccHHHHHHHHHHHHHHHcC--CCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           5 QNALDKENRKYFANEVDNLKSL--SHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         5 ~~~~~~~~~~~~~~e~~~l~~~--~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      .+.++..+.+.|.||.++++++  +|+||+.+.++-..+.    .+|||++|.+.|+|.+++.+ ..++.+....++..+
T Consensus       239 VKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~  317 (513)
T KOG2052|consen  239 VKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSI  317 (513)
T ss_pred             EEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHH
Confidence            3566778888999999999976  9999999988775543    47999999999999999998 489999999999999


Q ss_pred             HHHHHHHHhc--------cccc-cccccceEEecCCeeeccceeee
Q psy2929          79 AMALQYLHSL--------MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        79 ~~~l~~lh~~--------~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ++||.+||..        .+.| |||+.|||++.++.+-|+|+|++
T Consensus       318 AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA  363 (513)
T KOG2052|consen  318 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  363 (513)
T ss_pred             hhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence            9999999975        7899 99999999999999999999987

>KOG4279|consensus

Probab=99.78  E-value=4.5e-19  Score=130.44  Aligned_cols=107  Identities=26%  Similarity=0.275  Sum_probs=96.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCC--CHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKL--SEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~--~~~~~~~~~~~~~~~l~~l   85 (131)
                      +.+..+-+-+|+.+=++++|.|||++.|++...+++-++||-.+||+|.+++.. .+++  ++.++..+.+|++.||.|+
T Consensus       612 dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  612 DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence            455666688999999999999999999999999999999999999999999985 4565  8889999999999999999


Q ss_pred             Hhccccc-cccccceEEec-CCeeeccceeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKV-GSILAGGKLYFI  115 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~-~~~~kl~df~~~  115 (131)
                      |++.|+| |||-+|+|+.. .|.+||+|||-.
T Consensus       692 Hen~IVHRDIKGDNVLvNTySGvlKISDFGTs  723 (1226)
T KOG4279|consen  692 HENKIVHRDIKGDNVLVNTYSGVLKISDFGTS  723 (1226)
T ss_pred             hhcceeeccccCCcEEEeeccceEEecccccc
Confidence            9999999 99999999976 699999999844

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.78  E-value=3.1e-18  Score=119.14  Aligned_cols=104  Identities=27%  Similarity=0.335  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++|||++++.+++.. ....++++|++ ++++..++.. ..++...+..++.|++.|+.++|+.+
T Consensus        51 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~  128 (328)
T cd07856          51 VLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG  128 (328)
T ss_pred             chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            345667889999999999999999999865 45688999998 5588887764 35788888899999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| |++|+||+++.++.++++|||.+.
T Consensus       129 iiH~dl~p~Nili~~~~~~~l~dfg~~~  156 (328)
T cd07856         129 VVHRDLKPSNILINENCDLKICDFGLAR  156 (328)
T ss_pred             cccCCCCHHHEeECCCCCEEeCcccccc
Confidence            999 999999999999999999998765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.77  E-value=1.8e-18  Score=116.27  Aligned_cols=104  Identities=27%  Similarity=0.359  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+|+.+++.++|||++++++.+.+....++++||++++++...+..    ...+++..++.++.|++.|+.++|+
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  124 (260)
T cd08222          45 ETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ  124 (260)
T ss_pred             hHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence            444577889999999999999999999999999999999999999988864    2358899999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| |++|+||+++. +.++++|||++.
T Consensus       125 ~~i~h~~l~~~nili~~-~~~~l~d~g~~~  153 (260)
T cd08222         125 RRILHRDLKAKNIFLKN-NLLKIGDFGVSR  153 (260)
T ss_pred             cCccccCCChhheEeec-CCEeecccCcee
Confidence            99999 99999999975 569999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00284 protein kinase; Provisional

Probab=99.77  E-value=5.5e-18  Score=122.88  Aligned_cols=102  Identities=16%  Similarity=0.145  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHcCC------CCCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLS------HPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~l~~~~------h~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....|+.+++.++      |++++.+.+++... ...+++++++ ++++.+++...+.+++..+..++.|++.||.|||
T Consensus       170 ~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH  248 (467)
T PTZ00284        170 RDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFH  248 (467)
T ss_pred             HHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34556777776664      44588888888765 4678899987 7799999888778999999999999999999999


Q ss_pred             h-ccccc-cccccceEEecCC----------------eeeccceeeee
Q psy2929          87 S-LMSVN-QHKPRYIAWKVGS----------------ILAGGKLYFIE  116 (131)
Q Consensus        87 ~-~~~~h-dlk~~nili~~~~----------------~~kl~df~~~~  116 (131)
                      + .|++| ||||+|||++.++                .+|++|||.+.
T Consensus       249 ~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~  296 (467)
T PTZ00284        249 TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCC  296 (467)
T ss_pred             hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccc
Confidence            8 59999 9999999998765                48999999754

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.77  E-value=3.6e-18  Score=112.75  Aligned_cols=104  Identities=33%  Similarity=0.479  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|++.++.++|+|++++.+.+......++++|+..+++|.+++.....++......++.+++.++.++|+.+++|
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h  110 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIH  110 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeec
Confidence            57789999999999999999999999999999999999999999999987666889999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++.++.++++|||...
T Consensus       111 ~~i~~~ni~~~~~~~~~l~d~~~~~  135 (244)
T smart00220      111 RDLKPENILLDEDGHVKLADFGLAR  135 (244)
T ss_pred             CCcCHHHeEECCCCcEEEcccccee
Confidence             999999999999999999998765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.77  E-value=2.6e-18  Score=111.30  Aligned_cols=98  Identities=15%  Similarity=0.116  Sum_probs=78.1

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH-Hhccccc-c
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL-HSLMSVN-Q   93 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-h~~~~~h-d   93 (131)
                      ..+|.+.++.+.++++........  ...+++|||++++++.........++...+..++.|++.++.++ |+.|++| |
T Consensus        66 ~~~E~~~l~~l~~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrD  143 (190)
T cd05147          66 AEKEMRNLKRLVTAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHAD  143 (190)
T ss_pred             HHHHHHHHHHHHHCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            456999999997766644333222  23489999999877765544445788899999999999999999 7999999 9


Q ss_pred             ccccceEEecCCeeeccceeeee
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~  116 (131)
                      +||+||+++ ++.++++|||++.
T Consensus       144 lkP~NIli~-~~~v~LiDFG~a~  165 (190)
T cd05147         144 LSEYNLLYH-DGKLYIIDVSQSV  165 (190)
T ss_pred             CCHHHEEEE-CCcEEEEEccccc
Confidence            999999998 4789999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.77  E-value=5.1e-18  Score=116.22  Aligned_cols=105  Identities=17%  Similarity=0.215  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS-   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~-   87 (131)
                      .....+.+|+.++... .||||+++++.+.+....|+++|++.+ ++..++.. ...+++..+..++.|++.++.|+|+ 
T Consensus        55 ~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~  133 (296)
T cd06618          55 EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK  133 (296)
T ss_pred             HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            3445566677766666 599999999999999999999999854 77777765 3468888889999999999999997 


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| ||+|+||+++.++.++++|||++.
T Consensus       134 ~~i~H~dl~p~nill~~~~~~kL~dfg~~~  163 (296)
T cd06618         134 HGVIHRDVKPSNILLDASGNVKLCDFGISG  163 (296)
T ss_pred             CCEecCCCcHHHEEEcCCCCEEECccccch
Confidence            59999 999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.76  E-value=9.8e-18  Score=113.85  Aligned_cols=103  Identities=26%  Similarity=0.323  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHcC---CCCCceeEEEEEEeCCe-----eEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSL---SHPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        13 ~~~~~~e~~~l~~~---~h~~iv~l~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l   82 (131)
                      ...+.+|+.+++.+   +|||++++++.+...+.     .++++|++.+ ++.+++....  .+++..+..++.|++.|+
T Consensus        42 ~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al  120 (287)
T cd07838          42 PLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGV  120 (287)
T ss_pred             hhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence            34566777777655   69999999999988776     8999999965 8988887643  488999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++|+.+++| |++|+||+++.++.++++|||++.
T Consensus       121 ~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838         121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             HHHHHCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence            9999999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.76  E-value=2.2e-18  Score=120.43  Aligned_cols=104  Identities=26%  Similarity=0.365  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe------eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN------IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ...+.+.+|+.+++.++|||++++.+.+.....      .++++|++ +++|.+++.. ..+++..+..++.|++.++.+
T Consensus        56 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~  133 (343)
T cd07851          56 IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKY  133 (343)
T ss_pred             hHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Confidence            345667789999999999999999888766554      89999998 6699998876 368999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+.|++| |++|+||+++.++.++++|||++.
T Consensus       134 LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~  166 (343)
T cd07851         134 IHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR  166 (343)
T ss_pred             HHHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence            99999999 999999999999999999999775

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG2345|consensus

Probab=99.76  E-value=9e-19  Score=115.04  Aligned_cols=108  Identities=25%  Similarity=0.292  Sum_probs=95.8

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-----CCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLW-----KDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQI   78 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~   78 (131)
                      .+.++.+...+|++..+.++|||++++++....     ....|++++|...|+|.+.+....    .+++..++.++.++
T Consensus        57 ~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gi  136 (302)
T KOG2345|consen   57 HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGI  136 (302)
T ss_pred             cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHH
Confidence            356788889999999999999999999876643     345899999999999999997532    58999999999999


Q ss_pred             HHHHHHHHhcc--ccc-cccccceEEecCCeeeccceeee
Q psy2929          79 AMALQYLHSLM--SVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        79 ~~~l~~lh~~~--~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +.||+++|+..  +.| ||||.|||++..+..++.|||-.
T Consensus       137 c~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen  137 CRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             HHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence            99999999997  999 99999999999999999999854

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.76  E-value=1.9e-18  Score=118.68  Aligned_cols=102  Identities=28%  Similarity=0.418  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCC--------eeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKD--------NIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--------~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ..+.+|+++++.++||||+++++.+....        ..++++||+.+ ++...+.. ...+++..+..++.|++.+|.|
T Consensus        52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~  130 (311)
T cd07866          52 ITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINY  130 (311)
T ss_pred             hhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence            45678999999999999999998875433        46999999965 77776654 3469999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++|++| |++|+||+++.++.++++|||++.
T Consensus       131 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence            99999999 999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG3653|consensus

Probab=99.76  E-value=3.8e-18  Score=120.30  Aligned_cols=110  Identities=16%  Similarity=0.151  Sum_probs=99.7

Q ss_pred             ccccHHHHHHHHHHHHHHHcC--CCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           6 NALDKENRKYFANEVDNLKSL--SHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~--~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      |++..++.+.|++|-.+++..  +|+||+++.++-....    .+|||++|.+.|+|.++++.. ..++.....++..++
T Consensus       239 Kifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~Sma  317 (534)
T KOG3653|consen  239 KIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMA  317 (534)
T ss_pred             EecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHH
Confidence            567888999999999999965  7999999988875444    789999999999999999986 788999999999999


Q ss_pred             HHHHHHHhc---------cccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSL---------MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~---------~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +||.|||+.         +|+| |+|.+|||+..++.+.|+|||++-
T Consensus       318 rGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  318 RGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL  364 (534)
T ss_pred             HHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence            999999974         8999 999999999999999999999873

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.76  E-value=2.7e-17  Score=106.10  Aligned_cols=104  Identities=32%  Similarity=0.461  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|++.++.+.|++++++++.+......++++|++.+++|.+++... ...+......++.+++.++.++|+.|++
T Consensus        35 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~  114 (215)
T cd00180          35 LEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGII  114 (215)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            467899999999999999999999999989999999999989999999876 4688899999999999999999999999


Q ss_pred             c-cccccceEEec-CCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      | |++|.||+++. .+.++++||+...
T Consensus       115 H~dl~~~ni~~~~~~~~~~l~d~~~~~  141 (215)
T cd00180         115 HRDLKPENILLDSDNGKVKLADFGLSK  141 (215)
T ss_pred             ccCCCHhhEEEeCCCCcEEEecCCceE
Confidence            9 99999999999 8999999998765

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0983|consensus

Probab=99.76  E-value=1.6e-18  Score=115.64  Aligned_cols=110  Identities=15%  Similarity=0.162  Sum_probs=93.2

Q ss_pred             ccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHH
Q psy2929           6 NALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      +.-+.++.++++..++++.... .|.||+++++|......++.||.+. .-+..++.+ .+++++..+-.+...++.||.
T Consensus       127 rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~  205 (391)
T KOG0983|consen  127 RTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALY  205 (391)
T ss_pred             ccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHH
Confidence            4445667788899999888775 9999999999999999999999884 355555554 346888888888899999999


Q ss_pred             HHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.++ +++| |+||+|||++..|++|+||||++.
T Consensus       206 YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG  240 (391)
T KOG0983|consen  206 YLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG  240 (391)
T ss_pred             HHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence            99986 9999 999999999999999999998764

>KOG0576|consensus

Probab=99.76  E-value=7.4e-20  Score=133.27  Aligned_cols=119  Identities=23%  Similarity=0.330  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+...++.|+-+++.++||||+-+++.+..++..|++|||+.+|+|.+.-...+++++..+...++..+.++.|+|+.|-
T Consensus        54 dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk  133 (829)
T KOG0576|consen   54 DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGK  133 (829)
T ss_pred             ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCc
Confidence            35566788999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeeec----cccccCCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGPF  129 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp~  129 (131)
                      +| |||-.||++++.|.+|++|||....    .....++-||||
T Consensus       134 ~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpy  177 (829)
T KOG0576|consen  134 IHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPY  177 (829)
T ss_pred             ccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCcc
Confidence            99 9999999999999999999998753    334466778887

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.75  E-value=2.3e-17  Score=108.08  Aligned_cols=105  Identities=35%  Similarity=0.501  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+..++.++|+|++++++.+......++++|++++++|.+.+..... ++......++.+++.++.++|+.++
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  119 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI  119 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            567788999999999999999999999988999999999999999999988766 8899999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+|++++.++.++++|||...
T Consensus       120 ~h~di~~~ni~v~~~~~~~l~d~g~~~  146 (225)
T smart00221      120 VHRDLKPENILLGMDGLVKLADFGLAR  146 (225)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeeCceee
Confidence            99 999999999999999999998765

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1006|consensus

Probab=99.75  E-value=4.2e-19  Score=117.91  Aligned_cols=115  Identities=17%  Similarity=0.217  Sum_probs=94.9

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-----ccCCCHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----CVKLSEETCKCI   74 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~   74 (131)
                      ||+++-...+.++++++.|.+....- +.||||++||+...++.+|+.||.+.. ++..+-+.     ...+++.-+..+
T Consensus        94 VKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~I  172 (361)
T KOG1006|consen   94 VKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHI  172 (361)
T ss_pred             EEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhhe
Confidence            46666556678888899999865554 699999999999999999999999954 66555432     225777777778


Q ss_pred             HHHHHHHHHHHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .-..+.||.||-.. .++| |+||+|||++..|.+|+||||+..
T Consensus       173 tvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG  216 (361)
T KOG1006|consen  173 TVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG  216 (361)
T ss_pred             eeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence            77788999999876 9999 999999999999999999999764

>KOG0200|consensus

Probab=99.75  E-value=1.1e-17  Score=124.53  Aligned_cols=116  Identities=24%  Similarity=0.385  Sum_probs=104.4

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      ||.++...+..+.+.+..|+.+|+.+. ||||+.+.+++..++..+++.||+..|+|..++....               
T Consensus       333 VK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~  412 (609)
T KOG0200|consen  333 VKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNER  412 (609)
T ss_pred             EEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCcccc
Confidence            355555555678888999999999995 9999999999999999999999999999999998654               


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+....+..++.|++.|++|+.+.+++| |+...|||++.+..+|++|||++.
T Consensus       413 ~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar  466 (609)
T KOG0200|consen  413 DALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLAR  466 (609)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEcccccee
Confidence             2677789999999999999999999999 999999999999999999999986

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.74  E-value=1.5e-17  Score=107.78  Aligned_cols=100  Identities=16%  Similarity=0.075  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-ccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-LMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~~~h   92 (131)
                      ....+|.+.+..+.++++..........  .|++|||++++++..........+......++.|++.++.++|+ .|++|
T Consensus        64 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givH  141 (190)
T cd05145          64 AWAEKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVH  141 (190)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            3456899999999888875544433332  48999999887554432233467788889999999999999999 99999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++ ++.++++|||++.
T Consensus       142 rDlkP~NIll~-~~~~~liDFG~a~  165 (190)
T cd05145         142 GDLSEYNILYH-DGKPYIIDVSQAV  165 (190)
T ss_pred             CCCChhhEEEE-CCCEEEEEcccce
Confidence             9999999999 8899999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0199|consensus

Probab=99.74  E-value=6.5e-18  Score=124.20  Aligned_cols=120  Identities=21%  Similarity=0.210  Sum_probs=102.2

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~   78 (131)
                      ||.++...-......|++|+.+|-.++||++++|||...+ ...-+|+|+++.|+|.+.+...  ..+--..+..++.|+
T Consensus       143 VKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~Qi  221 (1039)
T KOG0199|consen  143 VKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQI  221 (1039)
T ss_pred             EEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHH
Confidence            3555433333366789999999999999999999999988 5578999999999999999873  257777888999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccc
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVR  121 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~  121 (131)
                      +.|+.||.+++++| |+...|+|+.....+||+|||+-.+-...
T Consensus       222 A~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  222 AKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             HHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            99999999999999 99999999999999999999987644443

>KOG0603|consensus

Probab=99.74  E-value=3.5e-18  Score=123.74  Aligned_cols=100  Identities=23%  Similarity=0.283  Sum_probs=87.8

Q ss_pred             HHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          16 FANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        16 ~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ..+|+.++... .|||++++.+.+.+....|+|||.+.|+.+.+.+.....+. .....|+++++.++.|||++|++| |
T Consensus       362 ~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRD  440 (612)
T KOG0603|consen  362 NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRD  440 (612)
T ss_pred             cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecC
Confidence            45677666666 59999999999999999999999999998888777654444 666789999999999999999999 9


Q ss_pred             ccccceEE-ecCCeeeccceeeee
Q psy2929          94 HKPRYIAW-KVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili-~~~~~~kl~df~~~~  116 (131)
                      ++|+|||+ +..+.++++|||++.
T Consensus       441 Lkp~NIL~~~~~g~lrltyFG~a~  464 (612)
T KOG0603|consen  441 LKPGNILLDGSAGHLRLTYFGFWS  464 (612)
T ss_pred             CChhheeecCCCCcEEEEEechhh
Confidence            99999999 689999999999875

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.73  E-value=1.4e-17  Score=116.30  Aligned_cols=104  Identities=28%  Similarity=0.443  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--------------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWK--------------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      ...+.+.+|+.+++.++||||+++++.+...              ...|+++||+.+ ++.+.+.. +.+++..+..++.
T Consensus        44 ~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~  121 (342)
T cd07854          44 QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMY  121 (342)
T ss_pred             chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHH
Confidence            3456688899999999999999999876554              357899999964 88887764 3688999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEec-CCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|+.|++| ||+|+||+++. ++.++++|||.+.
T Consensus       122 qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~  163 (342)
T cd07854         122 QLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLAR  163 (342)
T ss_pred             HHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence            9999999999999999 99999999985 5678999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1035|consensus

Probab=99.73  E-value=1.2e-17  Score=128.04  Aligned_cols=73  Identities=19%  Similarity=0.309  Sum_probs=62.8

Q ss_pred             eEEeeeccCCCChHHHHHhccCC--CHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          44 IYMFLEYVQGGDLKSKIEACVKL--SEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        44 ~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +|+-||||+..++.+++... .+  .....+.+.++++.||.|+|+.|++| |+||.|||++.++.+||+|||++..
T Consensus       671 LYIQMEyCE~~ll~~iI~~N-~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  671 LYIQMEYCEKTLLRDIIRRN-HFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEEHhhhhhhHHHHHHHhc-ccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            46778999886666666554 44  36778999999999999999999999 9999999999999999999998865

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1.5e-17  Score=116.17  Aligned_cols=102  Identities=25%  Similarity=0.352  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ....+.+|+.+++.++||||+++++++....      ..|+++|++.. ++.....  ..++...+..++.|++.|+.|+
T Consensus        57 ~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~L  133 (342)
T cd07879          57 FAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYI  133 (342)
T ss_pred             chhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999999987543      46899999964 7766543  3588899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.+++| ||+|+||+++.++.++++|||++.
T Consensus       134 H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879         134 HSAGIIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             HHCCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            9999999 999999999999999999999764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.73  E-value=7.9e-17  Score=110.44  Aligned_cols=97  Identities=16%  Similarity=0.133  Sum_probs=80.3

Q ss_pred             HHHHHHcCCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          19 EVDNLKSLSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        19 e~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      +...+..+.|++++.+++.+....    ..+++++++.. ++.+.+......++..+..++.|++.|+.|+|+.+++| |
T Consensus        73 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrD  151 (294)
T PHA02882         73 LWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGD  151 (294)
T ss_pred             HHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            334455678999999998876554    34677887743 77777766555778888999999999999999999999 9


Q ss_pred             ccccceEEecCCeeeccceeeee
Q psy2929          94 HKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~~~~kl~df~~~~  116 (131)
                      |||+|||++.++.++++|||++.
T Consensus       152 iKp~Nill~~~~~~~l~DFGla~  174 (294)
T PHA02882        152 IKPENIMVDGNNRGYIIDYGIAS  174 (294)
T ss_pred             CCHHHEEEcCCCcEEEEEcCCce
Confidence            99999999999999999999874

>KOG1151|consensus

Probab=99.73  E-value=4.1e-17  Score=115.31  Aligned_cols=105  Identities=29%  Similarity=0.378  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEE-eCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc--
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVL-WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL--   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~--   88 (131)
                      ..+..-+|.++-+.+.||.||++|++|. +.+.++-|.||++|.+|.-+++....+++...+.++-|++.||.||.+.  
T Consensus       510 YhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp  589 (775)
T KOG1151|consen  510 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP  589 (775)
T ss_pred             HHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence            4445678999999999999999999996 5567889999999999999999988899999999999999999999987  


Q ss_pred             cccc-cccccceEEecC---Ceeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVG---SILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~---~~~kl~df~~~~  116 (131)
                      +|+| |+||.|||+-+.   |.+||.|||+..
T Consensus       590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             CeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            9999 999999999654   789999999863

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=5.3e-17  Score=105.80  Aligned_cols=91  Identities=15%  Similarity=0.027  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          15 YFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      .+.+|+++|+++. +++++.++++    +..+++|+|+.|.+|.+.....       ...+..|++.++.++|++|++| 
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~~-------~~~~~~qi~~~L~~lH~~GIvHr  115 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPRG-------DLAYFRAARRLLQQLHRCGVAHN  115 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhhh-------hHHHHHHHHHHHHHHHHCcCccC
Confidence            5789999999995 5889999885    4469999999998886543221       1346788999999999999999 


Q ss_pred             cc-cccceEEecCCeeeccceeeee
Q psy2929          93 QH-KPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dl-k~~nili~~~~~~kl~df~~~~  116 (131)
                      |+ +|+|||++.++.++++|||++.
T Consensus       116 DL~kp~NILv~~~g~i~LIDFG~A~  140 (218)
T PRK12274        116 DLAKEANWLVQEDGSPAVIDFQLAV  140 (218)
T ss_pred             CCCCcceEEEcCCCCEEEEECCCce
Confidence            99 7999999999999999999875

>KOG0664|consensus

Probab=99.71  E-value=1.1e-18  Score=116.80  Aligned_cols=105  Identities=26%  Similarity=0.363  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .-+++.+|..+|..++|.|++...+......     .+|.++|.+.. +|..++-+...++.+-+..++.|+++||.|+|
T Consensus        95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLH  173 (449)
T KOG0664|consen   95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLH  173 (449)
T ss_pred             HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHh
Confidence            4566889999999999999999999886553     36888998876 88888877778999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +.+|.| ||||.|+|+..++..||+|||++..
T Consensus       174 sA~ILHRDIKPGNLLVNSNCvLKICDFGLARv  205 (449)
T KOG0664|consen  174 TANILHRDIKPGNLLVNSNCILKICDFGLART  205 (449)
T ss_pred             hcchhhccCCCccEEeccCceEEecccccccc
Confidence            999999 9999999999999999999999863

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.69  E-value=1.8e-16  Score=123.31  Aligned_cols=91  Identities=30%  Similarity=0.372  Sum_probs=82.2

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hccccc-
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH---SLMSVN-   92 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh---~~~~~h-   92 (131)
                      ..|++.++.++||||+++++++.+.+..|+||||+++|+|.+++..   +++.....++.|++.|+.|+|   +.+++| 
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~  807 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVG  807 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecC
Confidence            3468889999999999999999999999999999999999999864   778888999999999999999   669999 


Q ss_pred             cccccceEEecCCeeecc
Q psy2929          93 QHKPRYIAWKVGSILAGG  110 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~  110 (131)
                      |+||+||+++.++..++.
T Consensus       808 dlkp~Nil~~~~~~~~~~  825 (968)
T PLN00113        808 NLSPEKIIIDGKDEPHLR  825 (968)
T ss_pred             CCCHHhEEECCCCceEEE
Confidence            999999999988776654

>KOG1025|consensus

Probab=99.69  E-value=2e-17  Score=123.34  Aligned_cols=114  Identities=17%  Similarity=0.195  Sum_probs=101.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |++......+....+.+|+.+|..++|||++++.+.+..+. .-+|++|++.|+|.+++..+. ++.....+.|+.|+++
T Consensus       731 Kvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAk  809 (1177)
T KOG1025|consen  731 KVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAK  809 (1177)
T ss_pred             EEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            44544555666778999999999999999999999997766 778999999999999998754 6888889999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|||.++++| ||...|+|++.-..+|+.|||++.
T Consensus       810 gM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~  846 (1177)
T KOG1025|consen  810 GMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAK  846 (1177)
T ss_pred             HHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhh
Confidence            999999999999 999999999999999999999875

>KOG1027|consensus

Probab=99.69  E-value=2e-16  Score=117.71  Aligned_cols=105  Identities=27%  Similarity=0.275  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ......+||+..|+.. +||||+++|+.-.++.+.|+..|.|.- +|.+++....    ..........+.|+..|+.+|
T Consensus       544 e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL  622 (903)
T KOG1027|consen  544 EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL  622 (903)
T ss_pred             HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHH
Confidence            3444578999999998 599999999999999999999999965 9999998741    122245677889999999999


Q ss_pred             Hhccccc-cccccceEEec---C--Ceeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKV---G--SILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~---~--~~~kl~df~~~~  116 (131)
                      |+.+++| |+||+||||+.   +  ..++|+|||+..
T Consensus       623 Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK  659 (903)
T KOG1027|consen  623 HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK  659 (903)
T ss_pred             HhcccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence            9999999 99999999987   3  468999999874

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.67  E-value=2.5e-16  Score=104.22  Aligned_cols=92  Identities=18%  Similarity=0.206  Sum_probs=77.4

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeC--------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWK--------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +.+|+..+..+.||+|....+.+...        ...+++|||++|.+|.+...    .++    ....+++.++..+|+
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~  153 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQ  153 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHH
Confidence            67899999999999999999887644        34789999999999977632    222    245688999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++| |++|+|++++.+| ++++|||...
T Consensus       154 ~gi~H~Dikp~Nili~~~g-i~liDfg~~~  182 (232)
T PRK10359        154 HGMVSGDPHKGNFIVSKNG-LRIIDLSGKR  182 (232)
T ss_pred             cCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence            99999 9999999999988 9999998653

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=5.7e-16  Score=101.51  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ...+.+|+.++..+.|++++.....+.+....+++|||++|++|.+.+.....    ....++.+++.++.++|+.+++|
T Consensus        43 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H  118 (211)
T PRK14879         43 RERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIH  118 (211)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCccc
Confidence            34578899999999998888777777777788999999999999998876422    67788999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|.||+++ ++.++++|||.+.
T Consensus       119 ~Dl~p~Nil~~-~~~~~liDf~~a~  142 (211)
T PRK14879        119 GDLTTSNMILS-GGKIYLIDFGLAE  142 (211)
T ss_pred             CCCCcccEEEE-CCCEEEEECCccc
Confidence             9999999999 7889999998664

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.66  E-value=7.5e-16  Score=113.50  Aligned_cols=95  Identities=16%  Similarity=0.073  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+++.+|+++++.++|++++.......+....+++|||+++++|.+.+.        ....++.+++.++.++|+.+++|
T Consensus       380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiH  451 (535)
T PRK09605        380 TERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVH  451 (535)
T ss_pred             HHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCcc
Confidence            4568899999999999999888777777777899999999999998875        24568899999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||++ .++.++++|||++.
T Consensus       452 rDlkp~NILl-~~~~~~liDFGla~  475 (535)
T PRK09605        452 GDLTTSNFIV-RDDRLYLIDFGLGK  475 (535)
T ss_pred             CCCChHHEEE-ECCcEEEEeCcccc
Confidence             999999999 67889999999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.65  E-value=8.5e-16  Score=99.88  Aligned_cols=96  Identities=21%  Similarity=0.137  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+++.+|+++++.+.++++......+...+..+++||+++|+++.+.+.....       .++.+++.++.++|+.|++|
T Consensus        41 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H  113 (199)
T TIGR03724        41 RERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVH  113 (199)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeec
Confidence            35678899999999877665555555566777999999999999988765321       78899999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|.||+++ ++.+++.|||++.
T Consensus       114 ~Dl~~~Nil~~-~~~~~liDfg~a~  137 (199)
T TIGR03724       114 GDLTTSNIIVR-DDKLYLIDFGLGK  137 (199)
T ss_pred             CCCCcceEEEE-CCcEEEEECCCCc
Confidence             9999999999 8899999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1345|consensus

Probab=99.64  E-value=2.3e-16  Score=105.32  Aligned_cols=107  Identities=22%  Similarity=0.242  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEE-EEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYE-SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~-~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....|.+|-..=-.+ .|.+|+.-|+ .|...+.+++++||++.|+|.+-+.. .++.+.....+..|+++|+.|||+++
T Consensus        63 t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHskn  141 (378)
T KOG1345|consen   63 TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKN  141 (378)
T ss_pred             hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccc
Confidence            455677777644445 4889998875 45677888899999999999886554 36888999999999999999999999


Q ss_pred             ccc-cccccceEEec--CCeeeccceeeeeccc
Q psy2929          90 SVN-QHKPRYIAWKV--GSILAGGKLYFIENRQ  119 (131)
Q Consensus        90 ~~h-dlk~~nili~~--~~~~kl~df~~~~~~~  119 (131)
                      ++| |||.+||||.+  ..++|++|||......
T Consensus       142 lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  142 LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             hhhcccccceEEEecCCccEEEeeecccccccC
Confidence            999 99999999965  4689999999765433

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.60  E-value=7.1e-15  Score=98.37  Aligned_cols=101  Identities=16%  Similarity=0.076  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCc--eeEEEEEEeCC-e---eEEeeeccCC-CChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNI--VTLYESVLWKD-N---IYMFLEYVQG-GDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~i--v~l~~~~~~~~-~---~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ...++.+|+.+++.+.|+++  +...+....+. .   .++++|++++ .+|.+++... .++..    .+.+++.++.+
T Consensus        83 ~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~  157 (239)
T PRK01723         83 ERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIAR  157 (239)
T ss_pred             hhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHH
Confidence            44568889999999987775  56666543322 1   2599999997 6888887653 44443    35688999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +|++|++| |++|+|||++.++.++++|||.+..
T Consensus       158 lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        158 FHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            99999999 9999999999989999999986543

>smart00090 RIO RIO-like kinase

Probab=99.59  E-value=4.2e-15  Score=99.36  Aligned_cols=98  Identities=14%  Similarity=0.020  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHcCCC--CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc-c
Q psy2929          14 KYFANEVDNLKSLSH--PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM-S   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h--~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~-~   90 (131)
                      ..+.+|.+.++.+.+  ..++..++.    ...+++||++++.++.................++.|++.++.++|+.| +
T Consensus        95 ~~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i  170 (237)
T smart00090       95 LWAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGEL  170 (237)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence            346789999999964  334444432    235899999998887665533345566667889999999999999999 9


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++ .+.++++|||.+.
T Consensus       171 iH~Dikp~NIli~-~~~i~LiDFg~a~  196 (237)
T smart00090      171 VHGDLSEYNILVH-DGKVVIIDVSQSV  196 (237)
T ss_pred             EeCCCChhhEEEE-CCCEEEEEChhhh
Confidence            99 9999999999 8899999998654

>KOG1163|consensus

Probab=99.59  E-value=7.5e-15  Score=96.80  Aligned_cols=105  Identities=15%  Similarity=0.173  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+..|..+++.++ ...|+.+.-+...+++-.+|||.+ |.+|.+++..+. .|+..+++.++.|++.-++|+|..+++
T Consensus        55 pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fi  133 (341)
T KOG1163|consen   55 PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFI  133 (341)
T ss_pred             cchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccc
Confidence            34778999999996 678999888888888899999988 889999998655 699999999999999999999999999


Q ss_pred             c-cccccceEEecC---Ceeeccceeeeeccc
Q psy2929          92 N-QHKPRYIAWKVG---SILAGGKLYFIENRQ  119 (131)
Q Consensus        92 h-dlk~~nili~~~---~~~kl~df~~~~~~~  119 (131)
                      | ||||+|+|.+-+   ..+.++|||++....
T Consensus       134 HRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen  134 HRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             cccCCccceeeccccccceEEEEeccchhhhc
Confidence            9 999999999864   568899999986433

>KOG0670|consensus

Probab=99.59  E-value=1.7e-15  Score=108.69  Aligned_cols=107  Identities=18%  Similarity=0.188  Sum_probs=92.1

Q ss_pred             cHHHHHHHHHHHHHHHcCC------CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS------HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIA   79 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~------h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~   79 (131)
                      .+-..+.=++|+++|+.++      --+.+.++..|....-+|||+|.+ ..+|.++++..+   ++....+..++.|+.
T Consensus       468 NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLf  546 (752)
T KOG0670|consen  468 NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLF  546 (752)
T ss_pred             chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHH
Confidence            4445566678999999983      237889999999999999999988 559999999866   588899999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      .||..|-.+|++| ||||+|||+... ..+|+||||-+.
T Consensus       547 lALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~  585 (752)
T KOG0670|consen  547 LALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSAS  585 (752)
T ss_pred             HHHHHHHhcCeeecccCccceEeccCcceeeeccCcccc
Confidence            9999999999999 999999999875 567999998653

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.57  E-value=1e-14  Score=106.39  Aligned_cols=101  Identities=14%  Similarity=0.091  Sum_probs=79.1

Q ss_pred             HHHHHHHHHcCCCCCc-----eeEEEEEE--------eCCeeEEeeeccCCCChHHHHHhcc------------------
Q psy2929          16 FANEVDNLKSLSHPNI-----VTLYESVL--------WKDNIYMFLEYVQGGDLKSKIEACV------------------   64 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~i-----v~l~~~~~--------~~~~~~lv~e~~~~~~l~~~~~~~~------------------   64 (131)
                      ...|+.++..++|.++     +.+.+++.        .++..|+|+||+++++|.+++....                  
T Consensus       219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~  298 (507)
T PLN03224        219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP  298 (507)
T ss_pred             hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence            3446667777765544     44555543        2356899999999999999886421                  


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 ------KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ------~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                            ..+...+..++.|++.++.|+|+.+++| |+||+||+++.++.++++|||++.
T Consensus       299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~  357 (507)
T PLN03224        299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAV  357 (507)
T ss_pred             hhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCcc
Confidence                  1245567888999999999999999999 999999999999999999999864

>KOG1165|consensus

Probab=99.56  E-value=2e-14  Score=98.41  Aligned_cols=117  Identities=15%  Similarity=0.177  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...++..|.+.++.+. .++|+..|-.......-.||+|.+ |.+|.++++-++ .|+..+++.++.|++.-++++|+++
T Consensus        66 ~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~  144 (449)
T KOG1165|consen   66 EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD  144 (449)
T ss_pred             CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence            3445888999999985 799999998888777788999988 889999999665 6999999999999999999999999


Q ss_pred             ccc-cccccceEEecC-----CeeeccceeeeeccccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVG-----SILAGGKLYFIENRQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~-----~~~kl~df~~~~~~~~~~~~~gtp~  129 (131)
                      ++. ||||+|+||+.-     +.+.+.|||++..-.-..+...-||
T Consensus       145 LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY  190 (449)
T KOG1165|consen  145 LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY  190 (449)
T ss_pred             eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc
Confidence            999 999999999753     5689999999865544444444444

>KOG0671|consensus

Probab=99.56  E-value=1.6e-14  Score=99.92  Aligned_cols=95  Identities=17%  Similarity=0.278  Sum_probs=81.7

Q ss_pred             cHHHHHHHHHHHHHHHcCC-C-C----CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-H-P----NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAM   80 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h-~----~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~   80 (131)
                      ..+.+++..-|+++++.+. + |    ..+++.++|..++-.++|+|.+ |.++.+++...+  +++...++.+..|++.
T Consensus       125 V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~  203 (415)
T KOG0671|consen  125 VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLE  203 (415)
T ss_pred             HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHH
Confidence            3456677888999999983 2 2    4677788899999999999988 779999998765  6899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~  104 (131)
                      ++.+||+++++| |+||+|||+.+.
T Consensus       204 sv~fLh~~kl~HTDLKPENILfvss  228 (415)
T KOG0671|consen  204 SVAFLHDLKLTHTDLKPENILFVSS  228 (415)
T ss_pred             HHHHHHhcceeecCCChheEEEecc
Confidence            999999999999 999999999553

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.56  E-value=9e-14  Score=94.51  Aligned_cols=105  Identities=32%  Similarity=0.465  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHcCCCC-CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHP-NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~-~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.+|..+++.+.|+ +++.+.+.+......+++++++.++++.+.+....   .+.......+..|++.++.++|.
T Consensus        40 ~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~  119 (384)
T COG0515          40 EVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS  119 (384)
T ss_pred             HHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            467789999999999987 79999999987777899999999999997777664   68889999999999999999999


Q ss_pred             ccccc-cccccceEEecCC-eeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~-~~kl~df~~~~  116 (131)
                      .+++| |+||+|++++..+ .+++.|||.+.
T Consensus       120 ~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~  150 (384)
T COG0515         120 KGIIHRDIKPENILLDRDGRVVKLIDFGLAK  150 (384)
T ss_pred             CCeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence            99999 9999999999988 79999999764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.53  E-value=4.7e-15  Score=113.63  Aligned_cols=84  Identities=24%  Similarity=0.190  Sum_probs=66.4

Q ss_pred             HcCCC-CCceeEEEEE-------EeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          24 KSLSH-PNIVTLYESV-------LWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        24 ~~~~h-~~iv~l~~~~-------~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      +..+| +||..+.+++       ...+..++++|+. +++|.+++... ..++...++.++.|++.||.|||++|++| |
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            34456 5777788877       2234567778887 55999999754 35899999999999999999999999999 9


Q ss_pred             ccccceEEecCCeee
Q psy2929          94 HKPRYIAWKVGSILA  108 (131)
Q Consensus        94 lk~~nili~~~~~~k  108 (131)
                      |||+|||++..+.+|
T Consensus       106 lKP~NiLl~~~~~~k  120 (793)
T PLN00181        106 VRPSCFVMSSFNHVS  120 (793)
T ss_pred             CCchhEEEcccCcEE
Confidence            999999996544333

>KOG1290|consensus

Probab=99.53  E-value=7.3e-14  Score=99.44  Aligned_cols=95  Identities=20%  Similarity=0.257  Sum_probs=81.2

Q ss_pred             cHHHHHHHHHHHHHHHcCC-----C---CCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhcc--CCCHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-----H---PNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACV--KLSEETCKCI   74 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-----h---~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~   74 (131)
                      .+...++...|+.+|++++     +   ..||+|++.|...+    -.+||+|++ |.+|..+|....  +++...+..|
T Consensus       114 AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I  192 (590)
T KOG1290|consen  114 AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEI  192 (590)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHH
Confidence            3456778899999999983     2   36999999997653    579999999 669999998654  6899999999


Q ss_pred             HHHHHHHHHHHHhc-cccc-cccccceEEecC
Q psy2929          75 VYQIAMALQYLHSL-MSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        75 ~~~~~~~l~~lh~~-~~~h-dlk~~nili~~~  104 (131)
                      ++|++.||.|||.. |++| ||||+|||+...
T Consensus       193 ~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  193 CRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            99999999999986 9999 999999999765

>KOG1167|consensus

Probab=99.51  E-value=3.9e-14  Score=98.78  Aligned_cols=102  Identities=19%  Similarity=0.187  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...++.+|+++|..+. +.||+.+.+++...+...+|+||++..+..++...   ++...+..+++.++.||.++|.+||
T Consensus        77 ~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GI  153 (418)
T KOG1167|consen   77 SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGI  153 (418)
T ss_pred             CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCc
Confidence            4456889999999995 89999999999999999999999998777776554   6688899999999999999999999


Q ss_pred             cc-cccccceEEecC-Ceeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      +| |+||+|+|.+.. +.-.+.|||++.
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHH
Confidence            99 999999999875 678999999875

>KOG1164|consensus

Probab=99.50  E-value=7.2e-14  Score=97.24  Aligned_cols=101  Identities=20%  Similarity=0.152  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHcCC----CCCceeEEEEE-EeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          15 YFANEVDNLKSLS----HPNIVTLYESV-LWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        15 ~~~~e~~~l~~~~----h~~iv~l~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .+..|+.++..+.    .+++..+.+.+ ...++.|+||+.+ |.+|.++.....  .++..+...++.|++.+|+++|+
T Consensus        62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~  140 (322)
T KOG1164|consen   62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS  140 (322)
T ss_pred             cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh
Confidence            5777888888875    36899999999 5788899999977 789999886543  69999999999999999999999


Q ss_pred             ccccc-cccccceEEecC-----Ceeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVG-----SILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~-----~~~kl~df~~~~  116 (131)
                      .|++| ||||+|+.++..     ..+.+.|||++.
T Consensus       141 ~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  141 KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            99999 999999999875     468999999886

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.49  E-value=8.7e-14  Score=103.16  Aligned_cols=77  Identities=21%  Similarity=0.178  Sum_probs=64.3

Q ss_pred             eCCeeEEeeeccCCCChHHHHHhccC--------------------CCHHHHHHHHHHHHHHHHHHHhccccc-cccccc
Q psy2929          40 WKDNIYMFLEYVQGGDLKSKIEACVK--------------------LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRY   98 (131)
Q Consensus        40 ~~~~~~lv~e~~~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~n   98 (131)
                      .....++++||+.+++|.+++.....                    .....+..++.|++.||.|+|+.+++| ||||+|
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N  285 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN  285 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence            45678999999999999998875421                    112345678999999999999999999 999999


Q ss_pred             eEEec-CCeeeccceeeee
Q psy2929          99 IAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        99 ili~~-~~~~kl~df~~~~  116 (131)
                      ||++. .+.+|++|||++.
T Consensus       286 ILl~~~~~~~KL~DFGlA~  304 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAA  304 (566)
T ss_pred             EEEeCCCCcEEEEeCCCcc
Confidence            99986 5789999999875

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.48  E-value=1.4e-13  Score=89.55  Aligned_cols=92  Identities=12%  Similarity=-0.007  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHcCCCC--CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          15 YFANEVDNLKSLSHP--NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~--~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ...+|...+..+.++  .++...+    ....+++|||++++++......      .....++.+++.++.++|+.|++|
T Consensus        79 ~~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H  148 (198)
T cd05144          79 AAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIH  148 (198)
T ss_pred             HHHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCc
Confidence            467788888888766  3444443    2445899999999888665321      335668889999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++.++.++++|||.+.
T Consensus       149 ~Dl~p~Nill~~~~~~~liDfg~~~  173 (198)
T cd05144         149 GDLSEFNILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             CCCCcccEEEcCCCcEEEEECCccc
Confidence             999999999999999999999763

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.47  E-value=1.9e-13  Score=84.31  Aligned_cols=97  Identities=25%  Similarity=0.233  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHcCCC--CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc--
Q psy2929          13 RKYFANEVDNLKSLSH--PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL--   88 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h--~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~--   88 (131)
                      ...+.+|...++.+++  +.+++++.....++..++++|++.++.+..+       +......+..++..++..+|..  
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~  107 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPL  107 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCc
Confidence            4568889999999975  5899998888877889999999988766543       4456667888899999999985  


Q ss_pred             -cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 -MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 -~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       +++| |++|.|++++..+.+++.||+.+.
T Consensus       108 ~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120         108 LVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             eEEEecCCCcceEEEECCcEEEEEeccccc
Confidence             7999 999999999999999999998664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0590|consensus

Probab=99.42  E-value=5.4e-14  Score=104.57  Aligned_cols=100  Identities=27%  Similarity=0.250  Sum_probs=86.9

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cc
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QH   94 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dl   94 (131)
                      +..|..+=..+.|||++.....+.+....+-.|||+++ +|+.++...+.+.....-++.+|++.|++|+|+.|+.| |+
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            44566566677999998887777766666666999999 99999998777888889999999999999999999999 99


Q ss_pred             cccceEEecCCeeeccceeeee
Q psy2929          95 KPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        95 k~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|+++..+|.+|++|||.+.
T Consensus       447 K~enll~~~~g~lki~Dfg~~~  468 (601)
T KOG0590|consen  447 KLENLLVTENGILKIIDFGAAS  468 (601)
T ss_pred             ccccEEEecCCceEEeecCcce
Confidence            9999999999999999998653

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=9.6e-12  Score=79.34  Aligned_cols=97  Identities=18%  Similarity=0.129  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..++..+|.+++..++--.|..-.-+..+.+...++|||++|..+.+.+...   .    ..++..+-.-+.-||.+|++
T Consensus        42 rr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~giv  114 (204)
T COG3642          42 RRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIV  114 (204)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCee
Confidence            4456788999999886444444444455667778999999998888888775   1    44666677778889999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | |+.++||++..++ +.++|||++.
T Consensus       115 HGDLTtsNiIl~~~~-i~~IDfGLg~  139 (204)
T COG3642         115 HGDLTTSNIILSGGR-IYFIDFGLGE  139 (204)
T ss_pred             cCCCccceEEEeCCc-EEEEECCccc
Confidence            9 9999999998776 8889999875

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.30  E-value=3.1e-11  Score=78.42  Aligned_cols=96  Identities=14%  Similarity=0.141  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH-Hhcccc
Q psy2929          15 YFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL-HSLMSV   91 (131)
Q Consensus        15 ~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-h~~~~~   91 (131)
                      ..++|.+.|+++.  .-+++..++.    ...+++||++.+..+....-.....+......+..+++.++..+ |..|++
T Consensus        72 wa~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glV  147 (197)
T cd05146          72 WAEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLV  147 (197)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCee
Confidence            3558999999884  4567777754    45789999997643322111222344555667788999999988 899999


Q ss_pred             c-cccccceEEecCCeeeccceeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      | |+++.||++. ++.+.++||+.+
T Consensus       148 HGDLs~~NIL~~-~~~v~iIDF~qa  171 (197)
T cd05146         148 HADLSEYNMLWH-DGKVWFIDVSQS  171 (197)
T ss_pred             cCCCCHHHEEEE-CCcEEEEECCCc
Confidence            9 9999999997 467999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG4158|consensus

Probab=99.29  E-value=1e-11  Score=87.28  Aligned_cols=87  Identities=20%  Similarity=0.229  Sum_probs=72.3

Q ss_pred             CCCCceeEEEEEEeC---------------------------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929          27 SHPNIVTLYESVLWK---------------------------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus        27 ~h~~iv~l~~~~~~~---------------------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      +|||||.+++.|.++                           ...|+||..... +|.+++... ..+..+-..++.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHH
Confidence            799999999888432                           247899987755 898888765 567778888999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecC----Ceeeccceeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVG----SILAGGKLYFI  115 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~----~~~kl~df~~~  115 (131)
                      .++.|+|.+|+.| |+|++|||+..+    ....++|||+.
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence            9999999999999 999999999643    34789999865

>KOG1166|consensus

Probab=99.25  E-value=4.8e-12  Score=97.35  Aligned_cols=87  Identities=16%  Similarity=0.151  Sum_probs=77.3

Q ss_pred             CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecC---
Q psy2929          29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVG---  104 (131)
Q Consensus        29 ~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~---  104 (131)
                      +.|+.++.++...+..+++++|.+-|+|.+++...+..++..++.++.|++..++.+|..+||| ||||+|+|+...   
T Consensus       754 ~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~  833 (974)
T KOG1166|consen  754 PSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICA  833 (974)
T ss_pred             cchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCC
Confidence            4677777788888889999999999999999997778999999999999999999999999999 999999999653   


Q ss_pred             ----Ceeeccceeee
Q psy2929         105 ----SILAGGKLYFI  115 (131)
Q Consensus       105 ----~~~kl~df~~~  115 (131)
                          -.++|+|||.+
T Consensus       834 ~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  834 DSDSKGLYLIDFGRS  848 (974)
T ss_pred             CCcccceEEEecccc
Confidence                34799999854

>KOG1024|consensus

Probab=99.24  E-value=8.3e-11  Score=82.55  Aligned_cols=112  Identities=17%  Similarity=0.170  Sum_probs=90.2

Q ss_pred             ccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhcc--------CCCHHHHHHH
Q psy2929           4 VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACV--------KLSEETCKCI   74 (131)
Q Consensus         4 ~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~--------~~~~~~~~~~   74 (131)
                      ++...++-....+..|-..+....|||+.+..+...... .-+.++.+..-|+|..++..+.        ..+.-.+..+
T Consensus       322 vk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~m  401 (563)
T KOG1024|consen  322 VKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLM  401 (563)
T ss_pred             HHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHH
Confidence            333344555566778888888899999999988886654 4466778887889999998332        2555677788


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +.|+..|+.|+|..|++| ||...|.+|++.-.+|++|-.+.
T Consensus       402 asQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLS  443 (563)
T KOG1024|consen  402 ASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALS  443 (563)
T ss_pred             HHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhc
Confidence            999999999999999999 99999999999999999997554

>KOG0603|consensus

Probab=99.23  E-value=3.8e-12  Score=92.91  Aligned_cols=102  Identities=20%  Similarity=0.235  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          15 YFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      ....|..++..++ ||.++.+...+..+...+++.+++.+|.+...+.....+.......+...++-+++++|..++++ 
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyr  121 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYR  121 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHh
Confidence            5566788889887 99999999999999999999999999999999888878888999999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeee
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++||+++.+|.+++.|||+..
T Consensus       122 d~k~enilld~~Ghi~~tdfglsk  145 (612)
T KOG0603|consen  122 DYKLENVLLLLEGHIKLTDFGLSK  145 (612)
T ss_pred             cccccceeecccCccccCCchhhh
Confidence            999999999999999999999765

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.23  E-value=3.8e-11  Score=77.24  Aligned_cols=93  Identities=15%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             HHHHHHHHcCCCC--CceeEEEEEEeCCeeEEeeeccCCCChHH-HHHhccCCCHHHHHHHHHHHHHHHHHHHh-ccccc
Q psy2929          17 ANEVDNLKSLSHP--NIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQIAMALQYLHS-LMSVN   92 (131)
Q Consensus        17 ~~e~~~l~~~~h~--~iv~l~~~~~~~~~~~lv~e~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~~~h   92 (131)
                      ..|...+..+.+.  .++..++.    ...++++||++++++.. .+... .. ......++.+++.++.++|. .+++|
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH  138 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVH  138 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence            3556666665432  34444443    23589999999854321 11111 11 15677889999999999999 99999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       |++|+||+++ ++.++++|||.+.
T Consensus       139 ~Dl~p~Nili~-~~~~~liDfg~a~  162 (187)
T cd05119         139 GDLSEYNILVD-DGKVYIIDVPQAV  162 (187)
T ss_pred             CCCChhhEEEE-CCcEEEEECcccc
Confidence             9999999999 8999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1240|consensus

Probab=99.21  E-value=1.4e-12  Score=100.44  Aligned_cols=101  Identities=19%  Similarity=0.167  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...+..+|++ ....++||.+.+..........|||-+|... +|.+.+.-+.-+...+.+-++.|++.|+..||..|++
T Consensus        65 ~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVc  142 (1431)
T KOG1240|consen   65 PFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVC  142 (1431)
T ss_pred             HHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            3344445555 5667899999998888788888999999966 9999988775566667777899999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      | |||.+||||+..+++-++||.-
T Consensus       143 HGDIKsENILiTSWNW~~LtDFAs  166 (1431)
T KOG1240|consen  143 HGDIKSENILITSWNWLYLTDFAS  166 (1431)
T ss_pred             ccccccceEEEeeechhhhhcccc
Confidence            9 9999999999999999999953

>KOG1243|consensus

Probab=99.20  E-value=1.1e-10  Score=86.19  Aligned_cols=99  Identities=21%  Similarity=0.263  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH-SLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~~   90 (131)
                      ..+...+-+..|+.+|||+|+++++.+..++..|+|+|.+.  .|..+++..+   .......+.|++.||.+|| ..++
T Consensus        52 ~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~l  126 (690)
T KOG1243|consen   52 VTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNL  126 (690)
T ss_pred             hhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCe
Confidence            34457788889999999999999999999999999999885  7888887753   5556667899999999997 5699


Q ss_pred             cc-cccccceEEecCCeeeccceeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +| ++.-+.++++..|.+|+++|-..
T Consensus       127 vHgNv~~~SVfVn~~GeWkLggle~v  152 (690)
T KOG1243|consen  127 VHGNVCKDSVFVNESGEWKLGGLELV  152 (690)
T ss_pred             eeccEeeeeEEEcCCCcEEEeeeEEE
Confidence            99 99999999999999999999654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.12  E-value=2.3e-10  Score=82.73  Aligned_cols=98  Identities=14%  Similarity=0.053  Sum_probs=66.6

Q ss_pred             HHHHHHHHHcC----CCCCceeEEEEE-EeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH-HHHHHHhc
Q psy2929          16 FANEVDNLKSL----SHPNIVTLYESV-LWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM-ALQYLHSL   88 (131)
Q Consensus        16 ~~~e~~~l~~~----~h~~iv~l~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~l~~lh~~   88 (131)
                      +.+|.+.+..+    ++.+-+.+-..+ ......+++|||++|+++.+...... ....   ..++.+++. .+..+|..
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhC
Confidence            55666666655    222222322222 22345689999999999988765321 2222   234444444 46788999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| |++|.||+++.++.+++.|||+..
T Consensus       277 g~~H~D~hPgNilv~~~g~i~liDfG~~~  305 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDGKIIALDFGIVG  305 (437)
T ss_pred             CceeCCCCcccEEECCCCcEEEEeCCCee
Confidence            9999 999999999999999999999764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.12  E-value=1.6e-09  Score=73.68  Aligned_cols=101  Identities=9%  Similarity=-0.045  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHcCCC--CCceeEEEEEEe-----CCeeEEeeeccCCC-ChHHHHHhc--cCCCHHHHHHHHHHHHHHHHH
Q psy2929          15 YFANEVDNLKSLSH--PNIVTLYESVLW-----KDNIYMFLEYVQGG-DLKSKIEAC--VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        15 ~~~~e~~~l~~~~h--~~iv~l~~~~~~-----~~~~~lv~e~~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      .+.+|...+..+..  -..+....++..     ....++++|++++. ++.+++...  ...+......++.++...+..
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            47788888887732  233333333332     23478999999875 788887642  245566677899999999999


Q ss_pred             HHhccccc-cccccceEEec-------CCeeeccceeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKV-------GSILAGGKLYFI  115 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~-------~~~~kl~df~~~  115 (131)
                      ||..|++| |++++|||++.       +..+.++||+..
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence            99999999 99999999985       467888999754

>KOG3087|consensus

Probab=99.09  E-value=1.1e-09  Score=70.18  Aligned_cols=105  Identities=13%  Similarity=0.065  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCC-CChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQG-GDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..++..+|.+.+..++--.|.--.-++.+.....+.|||++| .++.+++....  .........++.++-..+.-||.+
T Consensus        53 tr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   53 TRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence            456678899999988655555555556666667899999976 36777776543  344444578888899999999999


Q ss_pred             cccc-cccccceEEecCCe---eeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                      +++| |+..+||++.+++.   +.++|||+..
T Consensus       133 diiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  133 DIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             CeecccccccceEEecCCCcCceEEEeecchh
Confidence            9999 99999999976543   3789998764

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.08  E-value=1.5e-09  Score=71.25  Aligned_cols=103  Identities=17%  Similarity=0.114  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHcCC--CCCceeEEEEEEeCC----eeEEeeeccCCC-ChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSLS--HPNIVTLYESVLWKD----NIYMFLEYVQGG-DLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~----~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ..+..+|...+..+.  .-..+...++...+.    ..++++|.+++. +|.+++......+......++.++...+.-|
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence            445777888777763  333445555554432    458999999874 7899888754566677788999999999999


Q ss_pred             Hhccccc-cccccceEEecCC---eeeccceeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGS---ILAGGKLYFI  115 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~---~~kl~df~~~  115 (131)
                      |++|++| |+++.|||+..++   .+.++||...
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~  168 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRM  168 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhc
Confidence            9999999 9999999999987   7888998543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1023|consensus

Probab=99.07  E-value=3.7e-10  Score=81.82  Aligned_cols=96  Identities=18%  Similarity=0.140  Sum_probs=87.0

Q ss_pred             HHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc-cc-cccccce
Q psy2929          23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS-VN-QHKPRYI   99 (131)
Q Consensus        23 l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~-~h-dlk~~ni   99 (131)
                      |+.+.|.|+.++.+.+.++...+.+.+|+..|+|.+.+.... ..+.-....++++++.|+.|+|...+ .| .+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            467889999999999999999999999999999999998854 57777888899999999999999977 89 9999999


Q ss_pred             EEecCCeeeccceeeeecc
Q psy2929         100 AWKVGSILAGGKLYFIENR  118 (131)
Q Consensus       100 li~~~~~~kl~df~~~~~~  118 (131)
                      +++....+|++|||+....
T Consensus        81 lvd~~w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLL   99 (484)
T ss_pred             eeeeeEEEEechhhhcccc
Confidence            9999999999999987644

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.05  E-value=4.3e-10  Score=71.12  Aligned_cols=91  Identities=19%  Similarity=0.130  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHcCCCCC-ceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc---
Q psy2929          15 YFANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS---   90 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~-iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~---   90 (131)
                      ...+|..+++.+.+.+ ++.++...  ....+++||+++|.++...     ..   .......++..++..+|+.++   
T Consensus        38 ~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~-----~~---~~~~~~~~l~~~l~~LH~~~~~~~  107 (170)
T cd05151          38 NRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTE-----DF---SDPENLEKIAKLLKKLHSSPLPDL  107 (170)
T ss_pred             CHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccccc-----cc---cCHHHHHHHHHHHHHHhCCCCCCc
Confidence            4677888888875433 34455443  3345799999999877543     11   112356788999999999985   


Q ss_pred             --cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 --VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 --~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                        +| |++|.||+++ ++.+++.||+.+.
T Consensus       108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             eeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence              99 9999999999 6789999997654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.99  E-value=1.2e-09  Score=70.64  Aligned_cols=97  Identities=22%  Similarity=0.155  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHcCCCC--CceeEEEEEEeCCeeEEeeeccC--CCChHHHHHhccCCCHHHHHHHHHHHHHHHHH-HH
Q psy2929          12 NRKYFANEVDNLKSLSHP--NIVTLYESVLWKDNIYMFLEYVQ--GGDLKSKIEACVKLSEETCKCIVYQIAMALQY-LH   86 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~--~iv~l~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-lh   86 (131)
                      .....++|.+.|+.+..-  +++..++..    ...++|||++  |..+..+....  ++......+..+++..+.. +|
T Consensus        51 ~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~  124 (188)
T PF01163_consen   51 IREWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLH  124 (188)
T ss_dssp             HHHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHH
Confidence            456678999999999643  567776442    3579999998  65555544332  2244456677777775554 57


Q ss_pred             hccccc-cccccceEEecCCeeeccceeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ..|++| |+.+.||+++.+ .+.++||+.+
T Consensus       125 ~~givHGDLs~~NIlv~~~-~~~iIDf~qa  153 (188)
T PF01163_consen  125 KAGIVHGDLSEYNILVDDG-KVYIIDFGQA  153 (188)
T ss_dssp             CTTEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred             hcCceecCCChhhEEeecc-eEEEEecCcc
Confidence            999999 999999999988 9999999754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.91  E-value=6.8e-10  Score=81.82  Aligned_cols=99  Identities=9%  Similarity=-0.006  Sum_probs=59.3

Q ss_pred             HHHHHHHHHcC----CCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          16 FANEVDNLKSL----SHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        16 ~~~e~~~l~~~----~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      +.+|...+.++    .+.+.+.+-..+.+ ....+++|||+.|+++.+.-.. ..+.+...+....  +...+..+...|
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~--v~~~~~Qif~~G  280 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERG--VEVFFTQVFRDG  280 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHH--HHHHHHHHHhCC
Confidence            34455444444    23333333333322 3456899999999999774321 1122222222111  111233345689


Q ss_pred             ccc-cccccceEEecCC----eeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGS----ILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~----~~kl~df~~~~  116 (131)
                      ++| |++|.||+++.++    .+++.|||+..
T Consensus       281 ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg  312 (537)
T PRK04750        281 FFHADMHPGNIFVSYDPPENPRYIALDFGIVG  312 (537)
T ss_pred             eeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence            999 9999999999988    99999999764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.82  E-value=3e-08  Score=63.02  Aligned_cols=56  Identities=23%  Similarity=0.115  Sum_probs=50.2

Q ss_pred             CChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccccccccccceEEecCCeeeccceeeee
Q psy2929          54 GDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        54 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~hdlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|.+++... .++++..++.++.|++.||.|+|+.+     ||+|||++.++.+++  ||+..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-----kp~Nil~~~~~~~~~--fG~~~   57 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA-----KSGNILLTWDGLLKL--DGSVA   57 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CcccEeEcCccceee--ccceE
Confidence            5889999864 46999999999999999999999998     999999999999998  88764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590|consensus

Probab=98.80  E-value=3.2e-10  Score=84.71  Aligned_cols=108  Identities=24%  Similarity=0.255  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHH-Hhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+...|..+-+.+. |+|++..++...+.++.+++.++..++++.+.+ .... ..+.+....+..|+..++.|+|
T Consensus        61 ~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H  140 (601)
T KOG0590|consen   61 EDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLH  140 (601)
T ss_pred             cchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccC
Confidence            334455556777667776 999999999999999999999999999999988 5544 5677778889999999999999


Q ss_pred             -hccccc-cccccceEEecCC-eeeccceeeeec
Q psy2929          87 -SLMSVN-QHKPRYIAWKVGS-ILAGGKLYFIEN  117 (131)
Q Consensus        87 -~~~~~h-dlk~~nili~~~~-~~kl~df~~~~~  117 (131)
                       ..++.| |++|+|.+++..+ ..+++|||++..
T Consensus       141 ~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~  174 (601)
T KOG0590|consen  141 PENGVTHRDIKPSNSLLDESGSALKIADFGLATA  174 (601)
T ss_pred             cccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence             999999 9999999999999 999999988753

>KOG3741|consensus

Probab=98.76  E-value=4.3e-08  Score=71.35  Aligned_cols=97  Identities=21%  Similarity=0.147  Sum_probs=79.9

Q ss_pred             HHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCC-CChHHHHHhc---------------cCCCHHHHHHHHHHHH
Q psy2929          20 VDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQG-GDLKSKIEAC---------------VKLSEETCKCIVYQIA   79 (131)
Q Consensus        20 ~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~~   79 (131)
                      ++.++++.|+|+|.+.+.+..    +..+.+|++|.++ ++|.++.-..               ...++..+|.++.|+.
T Consensus       324 ve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLt  403 (655)
T KOG3741|consen  324 VEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLT  403 (655)
T ss_pred             HHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHH
Confidence            668899999999999999873    3468999999885 4676655211               1357789999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .||.++|+.|+.. -+.|.+|+++...+++++..|+-+
T Consensus       404 aaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~D  441 (655)
T KOG3741|consen  404 AALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMD  441 (655)
T ss_pred             HHHHHHHhcCceeecccHhHeEeeCcceEEEeccccee
Confidence            9999999999999 999999999988888887766543

>KOG0195|consensus

Probab=98.75  E-value=7.5e-09  Score=70.05  Aligned_cols=100  Identities=18%  Similarity=0.246  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .+..+.|.+|...|+.+.||||..+.+++..+....++..|++.|+|..++.....  .+......++.++++|+.|+|+
T Consensus       228 ~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhs  307 (448)
T KOG0195|consen  228 ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHS  307 (448)
T ss_pred             hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhh
Confidence            34455688899999999999999999999999999999999999999999987653  5667788899999999999999


Q ss_pred             c-cccc--cccccceEEecCCeeec
Q psy2929          88 L-MSVN--QHKPRYIAWKVGSILAG  109 (131)
Q Consensus        88 ~-~~~h--dlk~~nili~~~~~~kl  109 (131)
                      . +++-  .+....++++.+-..++
T Consensus       308 lep~ipr~~lns~hvmidedltari  332 (448)
T KOG0195|consen  308 LEPMIPRFYLNSKHVMIDEDLTARI  332 (448)
T ss_pred             cchhhhhhhcccceEEecchhhhhe
Confidence            7 4443  89999999999877655

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.69  E-value=4.1e-08  Score=64.46  Aligned_cols=103  Identities=17%  Similarity=0.152  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHHcCCC--CCceeEEEEEEeCC---eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          13 RKYFANEVDNLKSLSH--PNIVTLYESVLWKD---NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h--~~iv~l~~~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+..|..+++.+.+  .++++++.......   ..++++|+++|.++.+.+.. ..++......++.+++.++..+|+
T Consensus        39 ~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          39 AHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             cccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            4568889999999864  44666776665432   56899999998777554321 123333333333344443333331


Q ss_pred             --------------------------------------------------------ccccc-cccccceEEec--CCeee
Q psy2929          88 --------------------------------------------------------LMSVN-QHKPRYIAWKV--GSILA  108 (131)
Q Consensus        88 --------------------------------------------------------~~~~h-dlk~~nili~~--~~~~k  108 (131)
                                                                              ..++| |+.|.||+++.  ++.+.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~  197 (223)
T cd05154         118 VDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVA  197 (223)
T ss_pred             CChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEE
Confidence                                                                    35689 99999999998  56688


Q ss_pred             ccceeeee
Q psy2929         109 GGKLYFIE  116 (131)
Q Consensus       109 l~df~~~~  116 (131)
                      +.||..+.
T Consensus       198 iID~e~~~  205 (223)
T cd05154         198 VLDWELAT  205 (223)
T ss_pred             EEeccccc
Confidence            99996543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK09902 hypothetical protein; Provisional

Probab=98.64  E-value=2.9e-07  Score=60.48  Aligned_cols=104  Identities=17%  Similarity=0.072  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHHHHHHcCC--CCCceeEEEEEEeC----CeeEEeeeccCC-CChHHHHHhcc--CCCHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS--HPNIVTLYESVLWK----DNIYMFLEYVQG-GDLKSKIEACV--KLSEETCKCIVYQIAM   80 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~--h~~iv~l~~~~~~~----~~~~lv~e~~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~~   80 (131)
                      +-....+.+|...++.+.  .-.++........+    -..+||+|-+.+ .+|.+.+....  +.+......++.++..
T Consensus        60 P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~  139 (216)
T PRK09902         60 PFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVAL  139 (216)
T ss_pred             CCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHH
Confidence            335678999999999884  22244443221111    236899997753 47888776532  3456666789999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCe--eecccee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSI--LAGGKLY  113 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~--~kl~df~  113 (131)
                      ++.-||+.|+.| |+.+.||+++.++.  ++++||-
T Consensus       140 ~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlE  175 (216)
T PRK09902        140 AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLE  175 (216)
T ss_pred             HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence            999999999999 99999999987776  7888883

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.62  E-value=2.8e-07  Score=60.84  Aligned_cols=65  Identities=15%  Similarity=0.148  Sum_probs=49.3

Q ss_pred             CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          42 DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        42 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ...++++||++|..+.+....    ++    .+...+..++.-+|..|+.| |.+|.|++++.++ +.+.|++..
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~i----~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIEDI----DE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             eEEEEEEEEecCeecccchhc----CH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECccc
Confidence            356789999999877664322    22    23455667789999999999 9999999998555 889999643

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.61  E-value=5.5e-08  Score=66.62  Aligned_cols=71  Identities=20%  Similarity=0.219  Sum_probs=47.4

Q ss_pred             eEEeeeccCCCChHHHHHh---ccCC----CHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeee
Q psy2929          44 IYMFLEYVQGGDLKSKIEA---CVKL----SEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        44 ~~lv~e~~~~~~l~~~~~~---~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .+++|+-+.+ +|.+++..   ....    ....-+.+..|++..+.++|+.|++| ||+|+|++++.+|.+.++||+..
T Consensus       114 ~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~  192 (288)
T PF14531_consen  114 RFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSL  192 (288)
T ss_dssp             EEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGE
T ss_pred             hhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHH
Confidence            3667776744 88877653   2122    12233455688899999999999999 99999999999999999999643

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.61  E-value=1.3e-07  Score=64.05  Aligned_cols=92  Identities=15%  Similarity=0.054  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHcCCCC--CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHP--NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~--~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .+...++|.+.|+.+...  .++..+++    +...++||+++|..|...-     .+......++..++..+.-+...|
T Consensus       152 sRl~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~G  222 (304)
T COG0478         152 SRLAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRG  222 (304)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcC
Confidence            455678999999998543  66665544    5678999999886554431     234455566777777788777999


Q ss_pred             ccc-cccccceEEecCCeeeccce
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df  112 (131)
                      ++| |+.+-||+++.+|.+.++||
T Consensus       223 iVHGDlSefNIlV~~dg~~~vIDw  246 (304)
T COG0478         223 IVHGDLSEFNILVTEDGDIVVIDW  246 (304)
T ss_pred             ccccCCchheEEEecCCCEEEEeC
Confidence            999 99999999999999999999

>KOG1266|consensus

Probab=98.51  E-value=1.1e-07  Score=66.00  Aligned_cols=90  Identities=26%  Similarity=0.289  Sum_probs=75.7

Q ss_pred             HHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhc--ccc
Q psy2929          23 LKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYLHSL--MSV   91 (131)
Q Consensus        23 l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~lh~~--~~~   91 (131)
                      +-++.|.|+++++.++.+..     ...++.||+..|++.+++++..    .+.......|+.|++.||.|||+.  .++
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            33457889999988886543     4678899999999999998654    477788899999999999999998  778


Q ss_pred             c-cccccceEEecCCeeeccce
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df  112 (131)
                      | ++..+.+++..+|-+|+...
T Consensus       201 hgnlTc~tifiq~ngLIkig~~  222 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIGSV  222 (458)
T ss_pred             cCCcchhheeecCCceEEeccc
Confidence            8 99999999999998887653

>KOG0601|consensus

Probab=98.40  E-value=1.7e-07  Score=68.57  Aligned_cols=104  Identities=23%  Similarity=0.146  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ...-..|+.+...+. |.+++.++..+..-+..|+--||+++++....+.....+.+...+.+..|++.++.++|+..++
T Consensus       309 di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~  388 (524)
T KOG0601|consen  309 DIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFV  388 (524)
T ss_pred             hhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhh
Confidence            333456777777665 8899999988888888889999999888766664433578888899999999999999999999


Q ss_pred             c-cccccceEEecC-Ceeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      | |++|+||++..+ +..++.||++..
T Consensus       389 ~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  389 HLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             cccccccceeeccchhhhhcccccccc
Confidence            9 999999999986 777888887664

>KOG0601|consensus

Probab=98.32  E-value=5.1e-07  Score=66.17  Aligned_cols=104  Identities=18%  Similarity=0.080  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC-CCHHHHHHHHHHHHH----HHHHH
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQIAM----ALQYL   85 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~----~l~~l   85 (131)
                      ....-.+|...-..++ |++.+..+..+...+..|+-+|.+ +.++.++...... ++...++....+...    |+.++
T Consensus       160 ~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~  238 (524)
T KOG0601|consen  160 DSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL  238 (524)
T ss_pred             ccccccchhhcccccCccccccccCcccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhccccccccc
Confidence            3344456677667775 999999999999999999999988 5688888876554 777788888888888    99999


Q ss_pred             Hhccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      |..+++| +++|.|++...+ ..+++.||++..
T Consensus       239 hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  239 HSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             CCCcccccccchhheecccccceeecCCcceeE
Confidence            9999999 999999999998 889999998754

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.28  E-value=4.3e-06  Score=54.21  Aligned_cols=93  Identities=20%  Similarity=0.104  Sum_probs=72.4

Q ss_pred             HHHHHHHHcCCC-CCceeEEEEEEeCCeeEEeeeccCCCChHHH---HHhccCCCHHHHHHHHHHHHHHHHHHHhc--cc
Q psy2929          17 ANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSK---IEACVKLSEETCKCIVYQIAMALQYLHSL--MS   90 (131)
Q Consensus        17 ~~e~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~l~~lh~~--~~   90 (131)
                      ..|.-+++.+.+ +++++++|++    ..+++.|+...+++...   +......+++....++.+++..+.+++..  |.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            357788888864 6999999998    24678899976655321   11112467888899999999999999884  55


Q ss_pred             cc--cccccceEEecCCeeecccee
Q psy2929          91 VN--QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        91 ~h--dlk~~nili~~~~~~kl~df~  113 (131)
                      +|  |++|+|+-++.++++|+.|+.
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld  107 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLD  107 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEech
Confidence            77  999999999999999999984

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1033|consensus

Probab=98.27  E-value=3e-07  Score=66.64  Aligned_cols=71  Identities=20%  Similarity=0.199  Sum_probs=62.9

Q ss_pred             eeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          43 NIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        43 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+.|++++..+|.+.+....   .-+...++.+..|+..+++|   ++.+| |++|.||+...+..+||.|||+..
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t  404 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT  404 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence            5789999999999999997543   35667788999999999999   99999 999999999999999999999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.01  E-value=0.00012  Score=47.90  Aligned_cols=94  Identities=18%  Similarity=0.140  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHcCC------CCCceeEEEEEEeCCeeEEeeeccCC------CChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSLS------HPNIVTLYESVLWKDNIYMFLEYVQG------GDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~------h~~iv~l~~~~~~~~~~~lv~e~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      .....+|+.....+.      +..|.+++|...++...-+|+|.+..      .+|.+++... .++. .   +...+-.
T Consensus        55 ~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~---~~~~L~~  129 (199)
T PF10707_consen   55 YRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-E---LRQALDE  129 (199)
T ss_pred             hHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH-H---HHHHHHH
Confidence            344566666655554      78999999999999888888887763      3577777543 4544 2   3333344


Q ss_pred             HHHHHHhccccc-cccccceEEecCC----eeeccc
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGS----ILAGGK  111 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~----~~kl~d  111 (131)
                      -.+++-+++|+. |++|.||++....    .+.+.|
T Consensus       130 f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  130 FKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             HHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence            567888999999 9999999997643    355555

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.93  E-value=6.6e-05  Score=55.65  Aligned_cols=99  Identities=9%  Similarity=0.094  Sum_probs=65.7

Q ss_pred             HHHHHHHHHcC-----CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          16 FANEVDNLKSL-----SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        16 ~~~e~~~l~~~-----~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      +.+|...+..+     ..|++.--.-++.......++|||+.|..+.+..... .+.+...+.....+  ..+..+-..|
T Consensus       208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~--~f~~q~~~dg  285 (517)
T COG0661         208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVR--AFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHH--HHHHHHHhcC
Confidence            55666666665     2344433333333445678999999998888875322 34554443333222  1244555689


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.| |.+|.||++..+|.+...|||...
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g  313 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVG  313 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCccee
Confidence            999 999999999999999999998754

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.85  E-value=0.0001  Score=49.42  Aligned_cols=45  Identities=11%  Similarity=0.103  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHH
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKS   58 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~   58 (131)
                      ....+|+++++.+. +-.++++++.....+..++++++++|.++..
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            34677888888773 4557777877776667899999999876654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0606|consensus

Probab=97.76  E-value=1.3e-05  Score=62.83  Aligned_cols=38  Identities=21%  Similarity=0.235  Sum_probs=35.7

Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.+++|+|+-|++| |+||+|.+|+.-|.+|+.|||+..
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk  191 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSK  191 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhh
Confidence            78899999999999 999999999999999999998753

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.65  E-value=0.00066  Score=45.29  Aligned_cols=43  Identities=12%  Similarity=0.122  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHHcCCC--CCceeEEEEEEeCCeeEEeeeccCCCC
Q psy2929          13 RKYFANEVDNLKSLSH--PNIVTLYESVLWKDNIYMFLEYVQGGD   55 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h--~~iv~l~~~~~~~~~~~lv~e~~~~~~   55 (131)
                      .....+|.++++.+..  -.++..++.....+...++||+++|.+
T Consensus        36 ~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        36 KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            3457889999988753  235677777777777789999998853

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.55  E-value=0.00049  Score=46.49  Aligned_cols=94  Identities=14%  Similarity=-0.004  Sum_probs=60.9

Q ss_pred             HHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-ccccc
Q psy2929          16 FANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-LMSVN   92 (131)
Q Consensus        16 ~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~~~h   92 (131)
                      ...|...|+++.  +-.+++-+...    ...|+|||+.......-.-+..+..+.....+..+++..+.-|.. .+++|
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVH  190 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVH  190 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCccc
Confidence            456888888763  33344444433    246899999642110000011123333466677788888887777 89999


Q ss_pred             -cccccceEEecCCeeeccceee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~  114 (131)
                       ||..-|||+. ++.+.++|++-
T Consensus       191 gDLSEyNiL~~-~~~p~iID~~Q  212 (268)
T COG1718         191 GDLSEYNILVH-DGEPYIIDVSQ  212 (268)
T ss_pred             ccchhhheEEE-CCeEEEEECcc
Confidence             9999999999 88999999963

>KOG1235|consensus

Probab=97.43  E-value=0.00078  Score=50.21  Aligned_cols=81  Identities=12%  Similarity=0.055  Sum_probs=53.2

Q ss_pred             ceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHH-HHHHHhccccc-cccccceEEec----
Q psy2929          31 IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMA-LQYLHSLMSVN-QHKPRYIAWKV----  103 (131)
Q Consensus        31 iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-l~~lh~~~~~h-dlk~~nili~~----  103 (131)
                      |+++|..+.  ....|+|||++|..+.++-.-. .+++...+..-   +..+ ++-+-..|++| |-+|.||++..    
T Consensus       266 VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~---l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~  340 (538)
T KOG1235|consen  266 VPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRGISPHDILNK---LVEAYLEQIFKTGFFHADPHPGNILVRPNPEG  340 (538)
T ss_pred             CCeehhhcC--cceEEEEEecCCccCCCHHHHHHcCCCHHHHHHH---HHHHHHHHHHhcCCccCCCCCCcEEEecCCCC
Confidence            555554443  3468999999998776654422 25655543333   3332 23344568999 99999999994    


Q ss_pred             CCeeeccceeeee
Q psy2929         104 GSILAGGKLYFIE  116 (131)
Q Consensus       104 ~~~~kl~df~~~~  116 (131)
                      ++.+.+-|+|+-.
T Consensus       341 ~~~ivllDhGl~~  353 (538)
T KOG1235|consen  341 DEEIVLLDHGLYA  353 (538)
T ss_pred             CccEEEEcccccc
Confidence            5778889998653

>KOG0606|consensus

Probab=97.25  E-value=0.00011  Score=57.85  Aligned_cols=89  Identities=21%  Similarity=0.262  Sum_probs=75.2

Q ss_pred             CCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecC
Q psy2929          26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        26 ~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~  104 (131)
                      .++|.++..+-.+......+++++++.++++...+..-+..+.+-.......+..+.+++|...+.| |++|.|+++...
T Consensus       861 p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~  940 (1205)
T KOG0606|consen  861 PRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYD  940 (1205)
T ss_pred             CCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhccc
Confidence            3557777666666667788999999999999999988766666666677778899999999999999 999999999999


Q ss_pred             Ceeeccceee
Q psy2929         105 SILAGGKLYF  114 (131)
Q Consensus       105 ~~~kl~df~~  114 (131)
                      +..++.+|+.
T Consensus       941 gh~~l~~~~t  950 (1205)
T KOG0606|consen  941 GHRPLTDFGT  950 (1205)
T ss_pred             CCcccCcccc
Confidence            9999999973

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.24  E-value=0.0082  Score=39.38  Aligned_cols=48  Identities=19%  Similarity=0.369  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHHcCC-C-CCceeEEEEEE---eCCeeEEeeeccCCCChHH
Q psy2929          11 ENRKYFANEVDNLKSLS-H-PNIVTLYESVL---WKDNIYMFLEYVQGGDLKS   58 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h-~~iv~l~~~~~---~~~~~~lv~e~~~~~~l~~   58 (131)
                      .....+.+|..+++.+. + ..++.++....   .....++++++++|.++..
T Consensus        32 ~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   32 DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            35567788888888874 2 23566665432   3345789999999877666

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.23  E-value=0.0014  Score=43.81  Aligned_cols=27  Identities=11%  Similarity=0.042  Sum_probs=22.5

Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .++| |+.|.|++++.++..-+.||+.+
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            5899 99999999987665668999754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.58  E-value=0.0097  Score=40.07  Aligned_cols=82  Identities=13%  Similarity=0.043  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc--cccc
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL--MSVN   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~--~~~h   92 (131)
                      -+.++.+++.++.  .|+++..-  ....+-++.|.+-...          ..   ..-++..-+..|+..|+.  +.+|
T Consensus       104 ~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~----------i~---~~N~i~agi~~L~~fH~~~~~~lH  166 (308)
T PF07387_consen  104 LYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIK----------IN---FSNFITAGIKDLMDFHSENQHCLH  166 (308)
T ss_pred             hhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCcc----------cc---hhHHHHHhHHHHHHhhccCCCeec
Confidence            3566777777765  45666422  2223446777664211          11   111222235677888853  8899


Q ss_pred             -cccccceEEecCCeeecccee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~  113 (131)
                       |-.|+||+.+..|.+|+.|-+
T Consensus       167 GD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  167 GDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             CCCChhheeecCCCCEEecChh
Confidence             999999999999999999964

The function of this family is unknown.

>KOG2268|consensus

Probab=96.53  E-value=0.003  Score=44.75  Aligned_cols=88  Identities=11%  Similarity=0.014  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHcCC-CC-CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          15 YFANEVDNLKSLS-HP-NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~-~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ...+|...|+.+. |. .++..+    +.+.+++|||++.+.++.+.-+-   .+++   .+...+..-+.-|-.+|++|
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v---~d~~---~ly~~lm~~Iv~la~~GlIH  225 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPI----DHNRHCVVMELVDGYPLRQVRHV---EDPP---TLYDDLMGLIVRLANHGLIH  225 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcc----cccceeeHHHhhcccceeeeeec---CChH---HHHHHHHHHHHHHHHcCcee
Confidence            3567888888773 21 233333    33567899999998777664322   2233   23444555566788899999


Q ss_pred             -cccccceEEecCCeeeccce
Q psy2929          93 -QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df  112 (131)
                       |..-=||+++.++.++++||
T Consensus       226 gDFNEFNimv~dd~~i~vIDF  246 (465)
T KOG2268|consen  226 GDFNEFNIMVKDDDKIVVIDF  246 (465)
T ss_pred             cccchheeEEecCCCEEEeec
Confidence             99999999999999999999

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.95  E-value=0.035  Score=40.08  Aligned_cols=84  Identities=11%  Similarity=-0.030  Sum_probs=51.9

Q ss_pred             CCCCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc-cccc-cccccceEEec
Q psy2929          27 SHPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL-MSVN-QHKPRYIAWKV  103 (131)
Q Consensus        27 ~h~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~-~~~h-dlk~~nili~~  103 (131)
                      ..++..+.+-.-.++ .+.|++|++- |+++... +   .........++.+.+..+.-+..+ .+-| ++.-.||||+ 
T Consensus       283 g~~~~e~~~vv~~de~~y~yl~~kdh-gt~is~i-k---~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-  356 (488)
T COG5072         283 GSVFLETLKVVSLDETLYLYLHFKDH-GTPISII-K---ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-  356 (488)
T ss_pred             cchhhhcceEEecCCceEEEEEEecC-Cceeeee-e---cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-
Confidence            344444444333232 3567777765 4444321 1   133445555655555555444444 7789 9999999999 


Q ss_pred             CCeeeccceeeee
Q psy2929         104 GSILAGGKLYFIE  116 (131)
Q Consensus       104 ~~~~kl~df~~~~  116 (131)
                      .|++.++||.+++
T Consensus       357 ~GnvtLIDfklsR  369 (488)
T COG5072         357 EGNVTLIDFKLSR  369 (488)
T ss_pred             cCceEEEEeeeee
Confidence            9999999998765

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=95.42  E-value=0.059  Score=39.68  Aligned_cols=48  Identities=13%  Similarity=-0.069  Sum_probs=43.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccce
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df  112 (131)
                      .+.++......+.+..+..-+|+.|.+- |++++|+|+++++.+.+.|-
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcc
Confidence            4678889999999999999999999988 99999999999999988763

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.96  E-value=0.16  Score=32.98  Aligned_cols=97  Identities=12%  Similarity=0.032  Sum_probs=61.0

Q ss_pred             cccHHHHHHHHHHHHHHHcCCCCC-ceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~~h~~-iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ...+..+.+++.|.++|..+...+ -+++|.+..    .++.|||+.|.+|.+.-...   +...    +..++...--|
T Consensus        53 rr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~~~~~~---~rk~----l~~vlE~a~~L  121 (201)
T COG2112          53 RRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGKLEIGG---DRKH----LLRVLEKAYKL  121 (201)
T ss_pred             ecCCcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhhhhhcc---cHHH----HHHHHHHHHHH
Confidence            345566788999999999886433 344555432    34569999987887754431   2222    22334443335


Q ss_pred             Hhccccc-ccc-ccceEEecCCeeeccceee
Q psy2929          86 HSLMSVN-QHK-PRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        86 h~~~~~h-dlk-~~nili~~~~~~kl~df~~  114 (131)
                      -..|+-| .++ |...++..++.+-++||--
T Consensus       122 D~~GI~H~El~~~~k~vlv~~~~~~iIDFd~  152 (201)
T COG2112         122 DRLGIEHGELSRPWKNVLVNDRDVYIIDFDS  152 (201)
T ss_pred             HHhccchhhhcCCceeEEecCCcEEEEEccc
Confidence            5669999 654 5666666666899999953

>KOG2137|consensus

Probab=94.90  E-value=0.017  Score=44.13  Aligned_cols=40  Identities=20%  Similarity=0.199  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHhc-cccc-cccccceEEecCCeeeccceeee
Q psy2929          76 YQIAMALQYLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        76 ~~~~~~l~~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .++..|+.++|.. +++| ++.|++|.+...+.||++.|++.
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~  147 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFC  147 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhh
Confidence            3456889999986 9999 99999999999999999999764

>KOG0576|consensus

Probab=94.89  E-value=0.012  Score=45.10  Aligned_cols=98  Identities=14%  Similarity=0.099  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHcCCCCC-ceeEEEEEEeCCeeEEeeeccCCC-ChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          14 KYFANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGG-DLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~-iv~l~~~~~~~~~~~lv~e~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ....-++++|.+++||| .+..++.+..++..++.++++.++ +....+.. .-.+....+....+.-+.++.++|+..=
T Consensus       278 l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~  357 (829)
T KOG0576|consen  278 LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYK  357 (829)
T ss_pred             hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccc
Confidence            34566888999999999 777777777788889999998766 22222111 1134555666677777888889998876


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |    ||+.. .+..+..+|+...
T Consensus       358 ~~~d----~~l~s-~~~~~~~~~~v~~  379 (829)
T KOG0576|consen  358 VHRD----NILGS-EEEVKLLDFAVPP  379 (829)
T ss_pred             cCcc----ccccc-ccccccccccCCc
Confidence            77 7    66544 4677888887554

>PLN02876 acyl-CoA dehydrogenase

Probab=94.53  E-value=0.13  Score=40.85  Aligned_cols=43  Identities=19%  Similarity=0.363  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHcCC-CCCc--eeEEEEEEeC---CeeEEeeeccCCCCh
Q psy2929          14 KYFANEVDNLKSLS-HPNI--VTLYESVLWK---DNIYMFLEYVQGGDL   56 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~i--v~l~~~~~~~---~~~~lv~e~~~~~~l   56 (131)
                      ..+.+|.++++.+. |+++  ++.+..+.+.   +..|+|||+++|..+
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence            46789999999885 5554  7777766554   357899999987543

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.51  E-value=0.15  Score=36.46  Aligned_cols=38  Identities=26%  Similarity=0.164  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc----cccc-cccccceEEecCC
Q psy2929          68 EETCKCIVYQIAMALQYLHSL----MSVN-QHKPRYIAWKVGS  105 (131)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~----~~~h-dlk~~nili~~~~  105 (131)
                      .+-+..+..|++.-.-.+.+.    .++| ||||+|||+.+..
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence            345666666766555445443    6899 9999999997654

>KOG2270|consensus

Probab=94.47  E-value=0.16  Score=37.02  Aligned_cols=93  Identities=18%  Similarity=0.130  Sum_probs=59.1

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHh-ccccc-
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE-ACVKLSEETCKCIVYQIAMALQYLHS-LMSVN-   92 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~lh~-~~~~h-   92 (131)
                      ...|++.|++++...|+.---...  ....|||+++. .+-+.... +...++...+..+-.+++.-+.-|.. ++++| 
T Consensus       213 AEKE~RNLkRl~~aGIP~PePIlL--k~hVLVM~FlG-rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHA  289 (520)
T KOG2270|consen  213 AEKEMRNLKRLNNAGIPCPEPILL--KNHVLVMEFLG-RDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHA  289 (520)
T ss_pred             HHHHHHHHHHHHhcCCCCCCceee--ecceEeeeecc-CCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceecc
Confidence            457888888886555544322222  23579999994 33322211 11246666666666777777776654 59999 


Q ss_pred             cccccceEEecCCeeeccce
Q psy2929          93 QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df  112 (131)
                      ||.--|+|+..+ .+-++|.
T Consensus       290 DLSEfN~LyhdG-~lyiIDV  308 (520)
T KOG2270|consen  290 DLSEFNLLYHDG-KLYIIDV  308 (520)
T ss_pred             chhhhhheEECC-EEEEEEc
Confidence            999999998654 4555555

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.30  E-value=0.064  Score=36.88  Aligned_cols=24  Identities=8%  Similarity=-0.085  Sum_probs=22.8

Q ss_pred             cccc-cccccceEEecCCeeeccce
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df  112 (131)
                      -++| |+.|+|++.++.+.+.++||
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDW  178 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDW  178 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEec
Confidence            4799 99999999999999999999

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.25  E-value=0.09  Score=36.56  Aligned_cols=28  Identities=14%  Similarity=0.173  Sum_probs=24.6

Q ss_pred             ccccc-cccccceEEecCCeeeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .+++| |+.+.|++++.++...+.||+.+
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccc
Confidence            48999 99999999998887789999654

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=94.15  E-value=0.033  Score=38.87  Aligned_cols=27  Identities=7%  Similarity=0.054  Sum_probs=23.1

Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +++| |+.|.||+++.+...-+.||+.+
T Consensus       188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        188 GVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             ccCCCCCCCCcEEEECCceEEEEecccc
Confidence            8999 99999999997665679999654

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.07  E-value=0.03  Score=36.39  Aligned_cols=27  Identities=4%  Similarity=-0.018  Sum_probs=22.5

Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      -.+| |+.|.|++++.++ ++++|++.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            4589 9999999998877 8899996553

>KOG1035|consensus

Probab=93.92  E-value=0.37  Score=39.68  Aligned_cols=100  Identities=17%  Similarity=0.138  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCee----EEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~----~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +..+...-|...+....|+|+..++.+-..+...    ....+++...++.+.+..-+..+....+.+..+.+.|+.++|
T Consensus       224 ~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h  303 (1351)
T KOG1035|consen  224 KEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLH  303 (1351)
T ss_pred             HHHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHH
Confidence            3455566677788888999999999888655432    234567777788888887778889999999999999999999


Q ss_pred             hccccc-ccccc---ceEEecCCeeecc
Q psy2929          87 SLMSVN-QHKPR---YIAWKVGSILAGG  110 (131)
Q Consensus        87 ~~~~~h-dlk~~---nili~~~~~~kl~  110 (131)
                      +....| -+..+   +--.+..+.+..+
T Consensus       304 ~~~l~~v~L~~s~~~~~~~~~e~~~~~s  331 (1351)
T KOG1035|consen  304 SLSLEHVVLSASSSKESTVDGEGVVAIS  331 (1351)
T ss_pred             HhccceeEEecccccccccCccceeecc
Confidence            997766 55544   3333444444444

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.91  E-value=0.031  Score=38.65  Aligned_cols=27  Identities=7%  Similarity=-0.107  Sum_probs=23.2

Q ss_pred             cccc-cccccceEEecC----Ceeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVG----SILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~----~~~kl~df~~~  115 (131)
                      .++| |+.|.||+++.+    +.+.++||..+
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            6799 999999999985    88999999543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.88  E-value=0.16  Score=33.35  Aligned_cols=26  Identities=12%  Similarity=-0.008  Sum_probs=18.5

Q ss_pred             ccccc-cccccceEE-ecCCeeecccee
Q psy2929          88 LMSVN-QHKPRYIAW-KVGSILAGGKLY  113 (131)
Q Consensus        88 ~~~~h-dlk~~nili-~~~~~~kl~df~  113 (131)
                      ..++| |+.|.||++ ..++.++++||-
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfE  170 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFE  170 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GT
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHH
Confidence            37799 999999999 889999999993

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PTZ00384 choline kinase; Provisional

Probab=93.71  E-value=0.3  Score=35.40  Aligned_cols=25  Identities=4%  Similarity=-0.374  Sum_probs=20.1

Q ss_pred             ccccc-cccccceEEecCCeeecccee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      ..++| |+.+.||+.+. +.+.++||-
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~E  252 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFD  252 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEec
Confidence            46799 99999998754 558899983

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.69  E-value=0.077  Score=35.23  Aligned_cols=26  Identities=4%  Similarity=-0.078  Sum_probs=22.7

Q ss_pred             cccc-cccccceEEec-CCeeeccceee
Q psy2929          89 MSVN-QHKPRYIAWKV-GSILAGGKLYF  114 (131)
Q Consensus        89 ~~~h-dlk~~nili~~-~~~~kl~df~~  114 (131)
                      .++| |+.+.||+++. ++.+.+.||-.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~  198 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEY  198 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEccc
Confidence            6899 99999999998 57799999843

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=93.59  E-value=0.28  Score=34.64  Aligned_cols=28  Identities=11%  Similarity=0.039  Sum_probs=24.1

Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++| |..+.|+++++++.+=+.||+.+.
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence            6799 999999999999888888886543

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.42  E-value=0.18  Score=34.96  Aligned_cols=26  Identities=8%  Similarity=-0.198  Sum_probs=22.0

Q ss_pred             ccccc-cccccceEEecCCeeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      .+++| |+.+.|++++. +.+.+.||..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~  213 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDY  213 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcc
Confidence            47899 99999999987 6678999863

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.91  E-value=0.059  Score=37.12  Aligned_cols=28  Identities=7%  Similarity=0.045  Sum_probs=23.9

Q ss_pred             ccccc-cccccceEEecCCeeeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .+++| |+.|.|++++.++...+.||..+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            37999 99999999998877789999543

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK10593 hypothetical protein; Provisional

Probab=92.81  E-value=0.77  Score=32.00  Aligned_cols=44  Identities=18%  Similarity=0.207  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHcCCC---CCceeEEEEEEe---CCeeEEeeeccCCCChH
Q psy2929          14 KYFANEVDNLKSLSH---PNIVTLYESVLW---KDNIYMFLEYVQGGDLK   57 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h---~~iv~l~~~~~~---~~~~~lv~e~~~~~~l~   57 (131)
                      ..+.+|...++.+..   ..+++.++.+.+   .+..+++||++++.++.
T Consensus        52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~  101 (297)
T PRK10593         52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVE  101 (297)
T ss_pred             hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecC
Confidence            468889999987742   467788877654   35689999999987653

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=92.71  E-value=0.14  Score=36.77  Aligned_cols=37  Identities=27%  Similarity=0.192  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhc----cccc-cccccceEEecCC
Q psy2929          69 ETCKCIVYQIAMALQYLHSL----MSVN-QHKPRYIAWKVGS  105 (131)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~----~~~h-dlk~~nili~~~~  105 (131)
                      .-+..+..|++.-.--+.+.    .++| ||||+|||+.+..
T Consensus       275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  316 (434)
T PF05445_consen  275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSK  316 (434)
T ss_pred             HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCC
Confidence            34445555544332223333    6899 9999999997653

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>TIGR02721 ycfN_thiK thiamine kinase

Probab=92.19  E-value=0.081  Score=35.76  Aligned_cols=26  Identities=4%  Similarity=-0.082  Sum_probs=21.9

Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .++| |+.|.||+++.++ +.+.||..+
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEecccc
Confidence            5799 9999999999877 779998543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=92.02  E-value=0.2  Score=35.58  Aligned_cols=26  Identities=4%  Similarity=-0.100  Sum_probs=22.9

Q ss_pred             ccc-cccccceEEecCCe-eeccceeee
Q psy2929          90 SVN-QHKPRYIAWKVGSI-LAGGKLYFI  115 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~-~kl~df~~~  115 (131)
                      ++| |+.|.||+++.+.. .-+.||+.+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            899 99999999999885 788899754

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=89.97  E-value=0.2  Score=35.43  Aligned_cols=27  Identities=4%  Similarity=-0.178  Sum_probs=22.4

Q ss_pred             cccc-cccccceEEec-CCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKV-GSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~-~~~~kl~df~~~  115 (131)
                      -++| |+.+.||+++. ++.++++||..+
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYa  211 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYG  211 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEccccc
Confidence            3699 99999999985 578999999543

>PLN02236 choline kinase

Probab=89.56  E-value=0.48  Score=33.75  Aligned_cols=26  Identities=4%  Similarity=-0.187  Sum_probs=22.2

Q ss_pred             cccc-cccccceEEec-CCeeeccceee
Q psy2929          89 MSVN-QHKPRYIAWKV-GSILAGGKLYF  114 (131)
Q Consensus        89 ~~~h-dlk~~nili~~-~~~~kl~df~~  114 (131)
                      .++| |+++.||+++. ++.+.+.||..
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Ey  228 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEY  228 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehh
Confidence            6799 99999999986 46799999843

>PRK06148 hypothetical protein; Provisional

Probab=89.48  E-value=0.2  Score=40.76  Aligned_cols=28  Identities=4%  Similarity=-0.172  Sum_probs=22.7

Q ss_pred             ccccc-cccccceEEecCC--eee-ccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGS--ILA-GGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~--~~k-l~df~~~  115 (131)
                      .+++| |+.+.||+++.++  .+. +.|||..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa  234 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDA  234 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccc
Confidence            37899 9999999999875  454 8898754

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=89.45  E-value=0.17  Score=35.30  Aligned_cols=25  Identities=4%  Similarity=-0.269  Sum_probs=22.7

Q ss_pred             cccc-cccccceEEecCCeeecccee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      +++| |+.+.|++++.++.+-+.||.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd  222 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFE  222 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhh
Confidence            7999 999999999998888888984

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=89.06  E-value=2.7  Score=27.86  Aligned_cols=81  Identities=20%  Similarity=0.126  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHcC---CCCCc--eeEEEEEEeCC------------------eeEEeeeccCCCChHHHHHhccCCCHHHH
Q psy2929          15 YFANEVDNLKSL---SHPNI--VTLYESVLWKD------------------NIYMFLEYVQGGDLKSKIEACVKLSEETC   71 (131)
Q Consensus        15 ~~~~e~~~l~~~---~h~~i--v~l~~~~~~~~------------------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~   71 (131)
                      -|..|++...++   .+.++  ++++|+..=..                  -.-+|-||.+...         ....   
T Consensus       100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~---  167 (207)
T PF13095_consen  100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI---  167 (207)
T ss_pred             hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch---
Confidence            367788877766   45566  88888873110                  1234555554322         1222   


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeecccee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                       .-+.++++-+..+|..|++- |+++.|..     .-+++||+
T Consensus       168 -~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs  204 (207)
T PF13095_consen  168 -RDIPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFS  204 (207)
T ss_pred             -hHHHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecc
Confidence             23455666688899999999 99999985     33667775

>KOG2269|consensus

Probab=87.88  E-value=3.1  Score=30.20  Aligned_cols=87  Identities=16%  Similarity=0.257  Sum_probs=56.3

Q ss_pred             HHHHHHHcC-----CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH-Hhcccc
Q psy2929          18 NEVDNLKSL-----SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL-HSLMSV   91 (131)
Q Consensus        18 ~e~~~l~~~-----~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-h~~~~~   91 (131)
                      +|...|.++     ..|.+|.+-.       ..|||-|+...-+..---+...++.......-.|++.++..| |.+-++
T Consensus       334 kEmhNL~RMq~~GlpcP~vV~lkk-------hvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LV  406 (531)
T KOG2269|consen  334 KEMHNLSRMQKHGLPCPQVVKLKK-------HVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMCRLYKECLLV  406 (531)
T ss_pred             HHHHHHHHHHhcCCCCCceeeeec-------ceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHHHHHHhhhee
Confidence            455545444     4577766543       458888884322211111112477777777778888887765 566899


Q ss_pred             c-cccccceEEecCCeeeccce
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df  112 (131)
                      | |+.--|+|+..+ .+-++|.
T Consensus       407 HADlSEyN~Lw~~g-Kvw~IDV  427 (531)
T KOG2269|consen  407 HADLSEYNLLWTPG-KVWVIDV  427 (531)
T ss_pred             ecchhhhhheecCC-ceEEEec
Confidence            9 999999999887 5656665

>PRK06149 hypothetical protein; Provisional

Probab=87.64  E-value=0.7  Score=37.58  Aligned_cols=28  Identities=7%  Similarity=-0.164  Sum_probs=22.0

Q ss_pred             ccccc-cccccceEEecC--Ce---eeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVG--SI---LAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~--~~---~kl~df~~~  115 (131)
                      .+++| |+.+.||+++.+  +.   .-+.|||..
T Consensus       208 ~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~  241 (972)
T PRK06149        208 LQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDL  241 (972)
T ss_pred             ccccCCCCCcccEEEcCCCCCCcceeEEEEcccc
Confidence            48999 999999999865  23   367888754

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=87.23  E-value=0.36  Score=33.27  Aligned_cols=27  Identities=11%  Similarity=-0.120  Sum_probs=21.2

Q ss_pred             cccc-cccccceEEecCCe-eeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSI-LAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~-~kl~df~~~  115 (131)
                      .++| |+.|.|++++.++. .-+.||+.+
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a  214 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEA  214 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhc
Confidence            5799 99999999997554 458888543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.06  E-value=2.1  Score=29.32  Aligned_cols=52  Identities=25%  Similarity=0.406  Sum_probs=39.1

Q ss_pred             ccccHHHHHHHHHHHHHHHcC---CCCCceeEEEEEEeCCeeEEeeeccCCCChH
Q psy2929           6 NALDKENRKYFANEVDNLKSL---SHPNIVTLYESVLWKDNIYMFLEYVQGGDLK   57 (131)
Q Consensus         6 ~~~~~~~~~~~~~e~~~l~~~---~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~   57 (131)
                      +.........+..|+.-|+.+   +--.+++.+.....++..|+|+||++.+.+.
T Consensus        45 K~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          45 KCNQREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             EecchhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            344555667788888877766   3357888888888999999999999975543

>KOG1236|consensus

Probab=85.58  E-value=3.5  Score=30.80  Aligned_cols=59  Identities=14%  Similarity=0.025  Sum_probs=38.4

Q ss_pred             EEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hccccc-cccccceEEecC
Q psy2929          45 YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH-SLMSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        45 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~~~h-dlk~~nili~~~  104 (131)
                      .++-+|..|.++..+++-. ..++.....++.-...++.-+- -.+++| |+.|.||++-..
T Consensus       321 vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             eeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            4555677777777766643 3444455555555555555443 459999 999999999544

>PRK11768 serine/threonine protein kinase; Provisional

Probab=83.49  E-value=0.43  Score=33.65  Aligned_cols=25  Identities=16%  Similarity=0.150  Sum_probs=20.5

Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +++| |+.+.|||++ + ...+.||+.+
T Consensus       197 ~liHgD~h~~NvL~~-d-~~~iIDFDd~  222 (325)
T PRK11768        197 LRLHGDCHPGNILWR-D-GPHFVDLDDA  222 (325)
T ss_pred             cceecCCCchhcccc-C-CcEEEeCCCC
Confidence            7899 9999999995 3 5678999644

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=82.67  E-value=0.75  Score=29.94  Aligned_cols=28  Identities=11%  Similarity=-0.089  Sum_probs=22.4

Q ss_pred             ccccc-cccccceEEecCC-----eeeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGS-----ILAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~-----~~kl~df~~~  115 (131)
                      ..++| |+.+.|+++..++     .+.+.||..+
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~  153 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLS  153 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccC
Confidence            47899 9999999998654     5788888544

subfamily of choline kinases

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	131
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-08
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-08
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-08
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		7e-08
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		7e-08
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		7e-08
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		7e-08
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		8e-08
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		8e-08
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		8e-08
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		8e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-08
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-07
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-07
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-07
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-07
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		3e-07
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		4e-07
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		4e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-07
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		6e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-07
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		6e-07
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		9e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-06
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		1e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		1e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-06
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-06
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-06
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-06
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-06
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		3e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		5e-06
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		6e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		8e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-06
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		9e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		9e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		9e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		9e-06
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-05
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-05
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-05
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-05
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-05
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-05
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-05
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-05
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-05
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-05
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-05
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		5e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		6e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		6e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		7e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		7e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		9e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		9e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		9e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		9e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		9e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		9e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		9e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		9e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		9e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		9e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-04
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-04
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-04
3soa_A	444	Full-Length Human Camkii Length = 444		8e-04
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		9e-04

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1   MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           MK ++ A L   +R     E D L  ++HP IV L+ +   +  +Y+ L++++GGDL ++
Sbjct: 57  MKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR 116
Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +   V  +EE  K  + ++A+AL +LHSL
Sbjct: 117 LSKEVMFTEEDVKFYLAELALALDHLHSL 145

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1   MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           MK ++ A L   +R     E D L  ++HP IV L+ +   +  +Y+ L++++GGDL ++
Sbjct: 58  MKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR 117
Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +   V  +EE  K  + ++A+AL +LHSL
Sbjct: 118 LSKEVMFTEEDVKFYLAELALALDHLHSL 146

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E D L  ++HP IV L+ +   +  +Y+ L++++GGDL +++   V  +EE  K  + ++
Sbjct: 76  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 79  AMALQYLHSL 88
           A+AL +LHSL
Sbjct: 136 ALALDHLHSL 145

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           +E   AL+ E       E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+ 
Sbjct: 193 READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 245
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
              +L E TCK   YQ+ +A+QYLH
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQYLH 270

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           +E   AL+ E       E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+ 
Sbjct: 179 READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 231
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
              +L E TCK   YQ+ +A+QYLH
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLH 256

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           +E   AL+ E       E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+ 
Sbjct: 60  READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 112
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
              +L E TCK   YQ+ +A+QYLH
Sbjct: 113 GNKRLKEATCKLYFYQMLLAVQYLH 137

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+    +L E TCK   YQ
Sbjct: 64  TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78  IAMALQYLH 86
           + +A+QYLH
Sbjct: 123 MLLAVQYLH 131

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+    +L E TCK   YQ
Sbjct: 64  TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78  IAMALQYLH 86
           + +A+QYLH
Sbjct: 123 MLLAVQYLH 131

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+    +L E TCK   YQ
Sbjct: 63  TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 78  IAMALQYLH 86
           + +A+QYLH
Sbjct: 122 MLLAVQYLH 130

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++ LK L+HP I+ + ++    ++ Y+ LE ++GG+L  K+    +L E TCK   YQ
Sbjct: 64  TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78  IAMALQYLH 86
           + +A+QYLH
Sbjct: 123 MLLAVQYLH 131

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ NLK   HP+I+ LY+ +    +I+M +EYV GG+L   I    +L E+  + +  QI
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 79  AMALQYLHSLMSVNQ 93
              + Y H  M V++
Sbjct: 126 LSGVDYCHRHMVVHR 140

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E D L  ++HP +V L+ +   +  +Y+ L++++GGDL +++   V  +EE  K  + ++
Sbjct: 80  ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 79  AMALQYLHSL 88
           A+ L +LHSL
Sbjct: 140 ALGLDHLHSL 149

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGG 54
           +K+ +  L  +NR+ +  E+  +K L+HPN+V+  E       +   D   + +EY +GG
Sbjct: 45  IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 104
Query: 55  DLK---SKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKVG 104
           DL+   ++ E C  L E   + ++  I+ AL+YLH    +++  KP  I  + G
Sbjct: 105 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 158

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGG 54
           +K+ +  L  +NR+ +  E+  +K L+HPN+V+  E       +   D   + +EY +GG
Sbjct: 44  IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 103
Query: 55  DLK---SKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKVG 104
           DL+   ++ E C  L E   + ++  I+ AL+YLH    +++  KP  I  + G
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
           ++ +  ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL S I    
Sbjct: 43  SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65  K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
           K    L EE    ++ Q+ +AL+  H   S   H   +   K  ++   GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
           ++ +  ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL S I    
Sbjct: 43  SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65  K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
           K    L EE    ++ Q+ +AL+  H   S   H   +   K  ++   GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
           ++ +  ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL S I    
Sbjct: 43  SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65  K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
           K    L EE    ++ Q+ +AL+  H   S   H   +   K  ++   GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 63  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 56  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 116 TEFLKQILNGVYYLHSL 132

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 56  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 116 TEFLKQILNGVYYLHSL 132

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E+ NLK   HP+I+ LY+ +    + +M +EYV GG+L   I    ++ E   + +  Q
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 78  IAMALQYLHSLMSVNQ 93
           I  A+ Y H  M V++
Sbjct: 120 ILSAVDYCHRHMVVHR 135

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E+ NLK   HP+I+ LY+ +    + +M +EYV GG+L   I    ++ E   + +  Q
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 78  IAMALQYLHSLMSVNQ 93
           I  A+ Y H  M V++
Sbjct: 120 ILSAVDYCHRHMVVHR 135

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 64  EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 79  AMALQYLH 86
             A+QY H
Sbjct: 124 VSAVQYCH 131

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 61  EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 79  AMALQYLH 86
             A+QY H
Sbjct: 121 VSAVQYCH 128

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ E+  +    QI
Sbjct: 64  EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 79  AMALQYLH 86
             A+QY H
Sbjct: 124 VSAVQYCH 131

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV+ L+ + HPNI+TL++    K ++ + LE V GG+L   +     L+E+  
Sbjct: 72  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLHS
Sbjct: 132 TQFLKQILDGVHYLHS 147

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y+S L  + +++ +E++QGG L + I + V+L+EE
Sbjct: 83  QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL-TDIVSQVRLNEE 141
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL YLH+
Sbjct: 142 QIATVCEAVLQALAYLHA 159

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV+ L+ + HPNI+TL++    K ++ + LE V GG+L   +     L+E+  
Sbjct: 51  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 110
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLHS
Sbjct: 111 TQFLKQILDGVHYLHS 126

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV+ L+ + HPNI+TL++    K ++ + LE V GG+L   +     L+E+  
Sbjct: 58  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLHS
Sbjct: 118 TQFLKQILDGVHYLHS 133

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY+ GGD+ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY+ GGD+ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           N     +EV  LK L HPNI+ LYE    K N Y+ +E  +GG+L  +I    K SE   
Sbjct: 47  NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 106
Query: 72  KCIVYQIAMALQYLH 86
             I+ Q+     YLH
Sbjct: 107 AVIMKQVLSGTTYLH 121

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           N     +EV  LK L HPNI+ LYE    K N Y+ +E  +GG+L  +I    K SE   
Sbjct: 64  NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 123
Query: 72  KCIVYQIAMALQYLH 86
             I+ Q+     YLH
Sbjct: 124 AVIMKQVLSGTTYLH 138

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
           E+   F  E++ +KSL HPNI+ LYE+     +IY+ +E   GG+L  ++       E  
Sbjct: 65  EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
Query: 71  CKCIVYQIAMALQYLHSL 88
              I+  +  A+ Y H L
Sbjct: 125 AARIMKDVLSAVAYCHKL 142

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 66  EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 79  AMALQYLHSL 88
              + Y HS+
Sbjct: 126 LSGVSYCHSM 135

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
           E+   F  E++ +KSL HPNI+ LYE+     +IY+ +E   GG+L  ++       E  
Sbjct: 48  EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107
Query: 71  CKCIVYQIAMALQYLHSL 88
              I+  +  A+ Y H L
Sbjct: 108 AARIMKDVLSAVAYCHKL 125

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  ++ L HP +V L+ S   +++++M ++ + GGDL+  ++  V   EET K  + ++
Sbjct: 65  ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL 124
Query: 79  AMALQYLHS 87
            MAL YL +
Sbjct: 125 VMALDYLQN 133

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 171 IVLTFEYLHSL 181

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 13  RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           R+    EV  L+ + HPNI+TL++    + ++ + LE V GG+L   +     LSEE   
Sbjct: 59  REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 73  CIVYQIAMALQYLHS 87
             + QI   + YLH+
Sbjct: 119 SFIKQILDGVNYLHT 133

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79  AMALQYLHSL 88
              + Y H++
Sbjct: 125 ISGVSYAHAM 134

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 171 IVLTFEYLHSL 181

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 83  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 142
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 143 IVLTFEYLHSL 153

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 77  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 136
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 137 IVLTFEYLHSL 147

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 76  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 135
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 136 IVLTFEYLHSL 146

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A   + E+  +    QI
Sbjct: 56  EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 116 VSAVQYCHQKFIVHR 130

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 83  QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 141
Query: 70  TCKCIVYQIAMALQYLH 86
               +   +  AL YLH
Sbjct: 142 QIATVCLSVLRALSYLH 158

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  LK + HPN++TL+E    K ++ +  E V GG+L   +     L+EE  
Sbjct: 57  SREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEA 116
Query: 72  KCIVYQIAMALQYLHSL 88
              + QI   + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79  AMALQYLHSL 88
              + Y H++
Sbjct: 125 ISGVSYCHAM 134

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79  AMALQYLHSL 88
              + Y H++
Sbjct: 125 ISGVSYCHAM 134

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 64  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 123
Query: 79  AMALQYLHSL 88
              + Y H++
Sbjct: 124 ISGVSYCHAM 133

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79  AMALQYLHSL 88
              + Y H++
Sbjct: 125 ISGVSYCHAM 134

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV   K L+HPNIV L+E +  +  +Y+  EY  GG++   + A  +  E+  +    QI
Sbjct: 63  EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 79  AMALQYLHSLMSVNQ 93
             A+QY H    V++
Sbjct: 123 VSAVQYCHQKFIVHR 137

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++V+   DKE+      EV  LK L HPNI+ LYE    K   Y+  E   GG+L  +I 
Sbjct: 68  RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 124
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
           +  + SE     I+ Q+   + Y+H
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMH 149

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +KE+++ L         NE   L++++ P +V L  S     N+YM +EY  GG++ S +
Sbjct: 82  LKEIEHTL---------NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSL 88
               + SE   +    QI +  +YLHSL
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSL 160

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +KE+++ L         NE   L++++ P +V L  S     N+YM +EY  GG++ S +
Sbjct: 82  LKEIEHTL---------NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSL 88
               + SE   +    QI +  +YLHSL
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSL 160

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + +E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++V+   DKE+      EV  LK L HPNI+ LYE    K   Y+  E   GG+L  +I 
Sbjct: 86  RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
           +  + SE     I+ Q+   + Y+H
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMH 167

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++V+   DKE+      EV  LK L HPNI+ LYE    K   Y+  E   GG+L  +I 
Sbjct: 85  RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
           +  + SE     I+ Q+   + Y+H
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMH 166

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY  GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY  GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY  GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++V+   DKE+      EV  LK L HPNI+ LYE    K   Y+  E   GG+L  +I 
Sbjct: 62  RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
           +  + SE     I+ Q+   + Y+H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMH 143

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 91  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 170
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 171 IVLTFEYLHSL 181

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           +E  K F  EV N   LSH NIV++ +     D  Y+ +EY++G  L   IE+   LS +
Sbjct: 52  EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD 111
Query: 70  TCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
           T      QI   +++ H +  V++  KP+ I
Sbjct: 112 TAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  LK L HPNI+ LY+    K N Y+ +E  +GG+L  +I   +K +E     I+ Q+
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 79  AMALQYLH 86
              + YLH
Sbjct: 146 LSGVTYLH 153

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 83  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 142
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 143 IVLTFEYLHSL 153

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 85  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 144
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 145 IVLTFEYLHSL 155

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 189 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 247
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 248 QIAAVCLAVLQALSVLHA 265

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  LKSL HPNI+ L++    K   Y+  E+ +GG+L  +I    K  E     I+ Q
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 78  IAMALQYLHSLMSVNQH-KPRYI 99
           I   + YLH    V++  KP  I
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENI 177

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCI 74
           E++ LKSL HPNI+ ++E      N+Y+ +E  +GG+L  +I +       LSE     +
Sbjct: 70  EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 75  VYQIAMALQYLHSLMSVNQH-KPRYIAWKVGS 105
           + Q+  AL Y HS   V++  KP  I ++  S
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HP +  ++ +   K+N++  +EY+ GGDL   I++C K           +I + LQ+LHS
Sbjct: 77  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 112 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 170
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 171 QIAAVCLAVLQALSVLHA 188

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K  +  L  + +  F  E   LK  SHPNIV L      K  IY+ +E VQGGD  + +
Sbjct: 144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 61  EA-CVKLSEETCKCIVYQIAMALQYLHS 87
                +L  +T   +V   A  ++YL S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLES 231

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K  +  L  + +  F  E   LK  SHPNIV L      K  IY+ +E VQGGD  + +
Sbjct: 144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 61  EA-CVKLSEETCKCIVYQIAMALQYLHS 87
                +L  +T   +V   A  ++YL S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLES 231

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
            HP +  ++ +   K+N++  +EY+ GGDL   I++C K           +I + LQ+LH
Sbjct: 77  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 87  S 87
           S
Sbjct: 137 S 137

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
           E+D L S  HPNIV L ++  +++N+++ +E+  GG + +  +E    L+E   + +  Q
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78  IAMALQYLHS 87
              AL YLH 
Sbjct: 144 TLDALNYLHD 153

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
           E+D L S  HPNIV L ++  +++N+++ +E+  GG + +  +E    L+E   + +  Q
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78  IAMALQYLHS 87
              AL YLH 
Sbjct: 144 TLDALNYLHD 153

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +  L  S     N+YM +EY  GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
           E+D L S  HPNIV L ++  +++N+++ +E+  GG + +  +E    L+E   + +  Q
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78  IAMALQYLHS 87
              AL YLH 
Sbjct: 144 TLDALNYLHD 153

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 62  QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 120
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 121 QIAAVCLAVLQALSVLHA 138

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 58  QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 116
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 117 QIAAVCLAVLQALSVLHA 134

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 67  QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 125
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 126 QIAAVCLAVLQALSVLHA 143

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           ++ R+   NEV  ++   H N+V +Y S L  D +++ +E+++GG L + I    +++EE
Sbjct: 69  QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 127
Query: 70  TCKCIVYQIAMALQYLHS 87
               +   +  AL  LH+
Sbjct: 128 QIAAVCLAVLQALSVLHA 145

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +  L  S     N+YM +EY  GG++ S +    + SE   +    Q
Sbjct: 91  NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE    ++++ P +V L  S     N+YM LEY  GG++ S +    + SE   +    Q
Sbjct: 91  NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1   MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K+VQ  + +D + R     E+D LK L+HPN++  Y S +  + + + LE    GDL  
Sbjct: 62  LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I+   K    + E T      Q+  AL+++HS
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EY  GG++ S +    +  E   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK-IEACVKLS 67
           DKE  K   NE+  +  L H N++ LY++   K++I + +EYV GG+L  + I+    L+
Sbjct: 129 DKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT 185
Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E      + QI   ++++H +
Sbjct: 186 ELDTILFMKQICEGIRHMHQM 206

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++    L HPNI+ LY     +  IY+ LEY   G+L  +++      E+    I+ +
Sbjct: 72  REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEE 131
Query: 78  IAMALQYLH 86
           +A AL Y H
Sbjct: 132 LADALMYCH 140

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8   LDKENRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
           L K+  K+  +E + L K++ HP +V L+ S    D +Y  L+Y+ GG+L   ++     
Sbjct: 77  LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF 136
Query: 67  SEETCKCIVYQIAMALQYLHSL 88
            E   +    +IA AL YLHSL
Sbjct: 137 LEPRARFYAAEIASALGYLHSL 158

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++V+   DKE+      EV  LK L HPNI  LYE    K   Y+  E   GG+L  +I 
Sbjct: 62  RQVKQKTDKES---LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
           +  + SE     I+ Q+   + Y H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYXH 143

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL YLH
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL YLH
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL YLH
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27  SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
           +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL YLH
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           L  ++HP I+ ++ +      I+M ++Y++GG+L S +    +      K    ++ +AL
Sbjct: 60  LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 83  QYLHS 87
           +YLHS
Sbjct: 120 EYLHS 124

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  L  + HPNIV L +      ++Y+ ++ V GG+L  +I      +E     +++Q
Sbjct: 65  NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78  IAMALQYLHSLMSVNQ 93
           +  A++YLH L  V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G++  +++   K  E+     + +
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 122 LANALSYCHS 131

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   +     LSEE  
Sbjct: 58  SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K+V    D + R     E+  L+ L HP+I+ LY+ +  KD I M +EY  G +L   I 
Sbjct: 39  KKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV 95
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
              K+SE+  +    QI  A++Y H
Sbjct: 96  QRDKMSEQEARRFFQQIISAVEYCH 120

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  L+ L HP+I+ LY+ +  KD I M +EY  G +L   I    K+SE+  +    QI
Sbjct: 64  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 79  AMALQYLH 86
             A++Y H
Sbjct: 123 ISAVEYCH 130

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  L+ L HP+I+ LY+ +  KD I M +EY  G +L   I    K+SE+  +    QI
Sbjct: 63  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 79  AMALQYLH 86
             A++Y H
Sbjct: 122 ISAVEYCH 129

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K+V    D + R     E+  L+ L HP+I+ LY+ +  KD I M +EY  G +L   I 
Sbjct: 43  KKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV 99
Query: 62  ACVKLSEETCKCIVYQIAMALQYLH 86
              K+SE+  +    QI  A++Y H
Sbjct: 100 QRDKMSEQEARRFFQQIISAVEYCH 124

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   +     LSEE  
Sbjct: 58  SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   +     LSEE  
Sbjct: 58  SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   +     LSEE  
Sbjct: 58  SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G++  +++   K  E+     + +
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 122 LANALSYCHS 131

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  L  + HPNIV L +      ++Y+ ++ V GG+L  +I      +E     +++Q
Sbjct: 65  NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78  IAMALQYLHSLMSVNQ 93
           +  A++YLH L  V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   +     LSEE  
Sbjct: 58  SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72  KCIVYQIAMALQYLHS 87
              + QI   + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  L  + HPNIV L +      ++Y+ ++ V GG+L  +I      +E     +++Q
Sbjct: 65  NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78  IAMALQYLHSLMSVNQ 93
           +  A++YLH L  V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  L  + HPNIV L +      ++Y+ ++ V GG+L  +I      +E     +++Q
Sbjct: 65  NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78  IAMALQYLHSLMSVNQ 93
           +  A++YLH L  V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYES----VLWKDNIYMFLEYVQGGDLKSKIEAC 63
           L K  R+ F  E + LK L HPNIV  Y+S    V  K  I +  E    G LK+ ++  
Sbjct: 64  LTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF 123
Query: 64  VKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPR-----YIAWKVGSILAG 109
                +  +    QI   LQ+LH+      H+       +I    GS+  G
Sbjct: 124 KVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG 174

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +KE+  + +  + R+    EV  L ++ HPNIV   ES     ++Y+ ++Y +GGDL  +
Sbjct: 54  IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 60  IEA--CVKLSEETCKCIVYQIAMALQYLH 86
           I A   V   E+       QI +AL+++H
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLALKHVH 142

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +  L  S     N+YM +EY  GG++ S +    +  E   +    Q
Sbjct: 91  NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 151 IVLTFEYLHSL 161

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4   VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
           V+NA D  + K    E + L+ + HP IV L  +      +Y+ LEY+ GG+L  ++E  
Sbjct: 59  VRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 64  VKLSEETCKCIVYQIAMALQYLH 86
               E+T    + +I+MAL +LH
Sbjct: 116 GIFMEDTACFYLAEISMALGHLH 138

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4   VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
           V+NA D  + K    E + L+ + HP IV L  +      +Y+ LEY+ GG+L  ++E  
Sbjct: 59  VRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 64  VKLSEETCKCIVYQIAMALQYLH 86
               E+T    + +I+MAL +LH
Sbjct: 116 GIFMEDTACFYLAEISMALGHLH 138

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 12  NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
           ++K    E+  L  LSHPNI+ L E       I + LE V GG+L  +I      SE   
Sbjct: 91  DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA 150
Query: 72  KCIVYQIAMALQYLH 86
              V QI  A+ YLH
Sbjct: 151 ADAVKQILEAVAYLH 165

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  LK L HP+I+ LY+ +    +I M +EY  GG+L   I    +++E+  +    QI
Sbjct: 59  EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 79  AMALQYLH 86
             A++Y H
Sbjct: 118 ICAIEYCH 125

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 58  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 84  YLHSL 88
           YLH +
Sbjct: 118 YLHGI 122

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFL-EYVQGGDLKSK 59
           MKE+    D+E ++ F  EV  ++ L HPN++  +  VL+KD    F+ EY++GG L+  
Sbjct: 40  MKELIR-FDEETQRTFLKEVKVMRCLEHPNVLK-FIGVLYKDKRLNFITEYIKGGTLRGI 97
Query: 60  IEACVKLSEETCKC-IVYQIAMALQYLHSL 88
           I++       + +      IA  + YLHS+
Sbjct: 98  IKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 59  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84  YLHSL 88
           YLH +
Sbjct: 119 YLHGI 123

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84  YLHSL 88
           YLH +
Sbjct: 120 YLHGI 124

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 121 LANALSYCHS 130

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+ LK L HPNI+ L+E +    + Y+  E   GG+L  +I    + SE     I+ Q+
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79  AMALQYLH 86
              + Y+H
Sbjct: 131 FSGITYMH 138

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 5   QNALDKENRKY-FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
           ++ L+KE  ++    E++    L HPNI+ +Y     +  IY+ LE+   G+L  +++  
Sbjct: 50  KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 109
Query: 64  VKLSEETCKCIVYQIAMALQYLH 86
            +  E+     + ++A AL Y H
Sbjct: 110 GRFDEQRSATFMEELADALHYCH 132

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 118 LANALSYCHS 127

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 56  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 116 LANALSYCHS 125

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+ LK L HPNI+ L+E +    + Y+  E   GG+L  +I    + SE     I+ Q+
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79  AMALQYLH 86
              + Y+H
Sbjct: 131 FSGITYMH 138

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 119 LANALSYCHS 128

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 54  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 114 LANALSYCHS 123

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 122 LANALSYCHS 131

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 122 LANALSYCHS 131

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 5   QNALDKENRKY-FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
           ++ L+KE  ++    E++    L HPNI+ +Y     +  IY+ LE+   G+L  +++  
Sbjct: 49  KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 64  VKLSEETCKCIVYQIAMALQYLH 86
            +  E+     + ++A AL Y H
Sbjct: 109 GRFDEQRSATFMEELADALHYCH 131

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 75  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 134
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 135 TCTRFYTAEIVSALEYLHG 153

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 120 LANALSYCHS 129

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 122 LANALSYCHS 131

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 117 LANALSYCHS 126

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 118 LANALSYCHS 127

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 118 LANALSYCHS 127

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+ LK L HPNI+ L+E +    + Y+  E   GG+L  +I    + SE     I+ Q+
Sbjct: 71  EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79  AMALQYLH 86
              + Y+H
Sbjct: 131 FSGITYMH 138

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + ++
Sbjct: 84  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 79  AMALQYLHS 87
           A AL Y HS
Sbjct: 144 ANALSYCHS 152

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 119 LANALSYCHS 128

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 73  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 133 TCTRFYTAEIVSALEYLHG 151

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + ++
Sbjct: 84  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 79  AMALQYLHS 87
           A AL Y HS
Sbjct: 144 ANALSYCHS 152

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 73  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 133 TCTRFYTAEIVSALEYLHG 151

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + ++
Sbjct: 75  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 79  AMALQYLHS 87
           A AL Y HS
Sbjct: 135 ANALSYCHS 143

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 49  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 108
Query: 69  ETCKCIVYQIAMALQYLH 86
              +    +I  AL+YLH
Sbjct: 109 TCTRFYTAEIVSALEYLH 126

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 50  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 109
Query: 69  ETCKCIVYQIAMALQYLH 86
              +    +I  AL+YLH
Sbjct: 110 TCTRFYTAEIVSALEYLH 127

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 48  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 107
Query: 69  ETCKCIVYQIAMALQYLH 86
              +    +I  AL+YLH
Sbjct: 108 TCTRFYTAEIVSALEYLH 125

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 47  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 106
Query: 69  ETCKCIVYQIAMALQYLH 86
              +    +I  AL+YLH
Sbjct: 107 TCTRFYTAEIVSALEYLH 124

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 69  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 129 TCTRFYTAEIVSALEYLHG 147

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 69  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 129 TCTRFYTAEIVSALEYLHG 147

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I       E
Sbjct: 54  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 113
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 114 TCTRFYTAEIVSALEYLHG 132

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 26  LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL 85
           L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+   + YL
Sbjct: 62  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 86  HSL 88
           H +
Sbjct: 122 HGI 124

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +++ Q ++D+        E+  +    HPNIV+ Y S + KD +++ ++ + GG +   I
Sbjct: 45  LEKCQTSMDE-----LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 99
Query: 61  EACVK--------LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAG 109
           +  V         L E T   I+ ++   L+YLH    +++        K G+IL G
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD------VKAGNILLG 150

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +++ Q ++D+        E+  +    HPNIV+ Y S + KD +++ ++ + GG +   I
Sbjct: 50  LEKCQTSMDE-----LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104
Query: 61  EACVK--------LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAG 109
           +  V         L E T   I+ ++   L+YLH    +++        K G+IL G
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD------VKAGNILLG 155

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   +  E+     + +
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 121 LANALSYCHS 130

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   +  E+     + +
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 121 LANALSYCHS 130

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEETCKCIVYQ 77
           E+  L    H NI+ L+ES    + + M  E++ G D+  +I  +  +L+E      V+Q
Sbjct: 51  EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 78  IAMALQYLHS 87
           +  ALQ+LHS
Sbjct: 111 VCEALQFLHS 120

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY      + +Y  L Y + G+L   I       E
Sbjct: 77  KENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 136
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 137 TCTRFYTAEIVSALEYLHG 155

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           +  RK F  E+  L  ++HPNIV LY + L  + + + +EY +GG L + +     L   
Sbjct: 43  ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY 100
Query: 70  TCK-----CIVYQIAMALQYLHSL 88
           T       C+  Q +  + YLHS+
Sbjct: 101 TAAHAMSWCL--QCSQGVAYLHSM 122

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
           +  RK F  E+  L  ++HPNIV LY + L  + + + +EY +GG L + +     L   
Sbjct: 42  ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY 99
Query: 70  TCK-----CIVYQIAMALQYLHSL 88
           T       C+  Q +  + YLHS+
Sbjct: 100 TAAHAMSWCL--QCSQGVAYLHSM 121

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  LK + H NIVTL +      + Y+ ++ V GG+L  +I      +E+    ++ Q
Sbjct: 55  NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 78  IAMALQYLH 86
           +  A++YLH
Sbjct: 115 VLSAVKYLH 123

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HPNI+TL +      ++Y+  E ++GG+L  KI      SE     +++ I   ++YLHS
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 88  LMSVNQH-KPRYIAW 101
              V++  KP  I +
Sbjct: 140 QGVVHRDLKPSNILY 154

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           HPNI+TL +      ++Y+  E ++GG+L  KI      SE     +++ I   ++YLHS
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 88  LMSVNQH-KPRYIAW 101
              V++  KP  I +
Sbjct: 140 QGVVHRDLKPSNILY 154

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 36/60 (60%)
Query: 29  PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           P +VTL+ +   +  +++ L+Y+ GG+L + +    + +E   +  V +I +AL++LH L
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 54  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 55  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 114 -MDEGQIAAVCRECLQALEFLHS 135

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 54  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 10  KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           KEN+  Y   E D +  L HP  V LY +    + +Y  L Y + G L   I       E
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
Query: 69  ETCKCIVYQIAMALQYLHS 87
              +    +I  AL+YLH 
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 55  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 114 -MDEGQIAAVCRECLQALEFLHS 135

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
           N   +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   + E C 
Sbjct: 54  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            + E     +  +   AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACVKLSEETCK 72
           F  EV  +K L HPNIV    +V    N+ +  EY+  G L     K  A  +L E    
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 73  CIVYQIAMALQYLHS 87
            + Y +A  + YLH+
Sbjct: 141 SMAYDVAKGMNYLHN 155

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACVKLSEETCK 72
           F  EV  +K L HPNIV    +V    N+ +  EY+  G L     K  A  +L E    
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 73  CIVYQIAMALQYLHS 87
            + Y +A  + YLH+
Sbjct: 141 SMAYDVAKGMNYLHN 155

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 24  KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
           + L HPNIV L++S+  +   Y+  + V GG+L   I A    SE      + QI  ++ 
Sbjct: 83  RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 84  YLHS 87
           Y HS
Sbjct: 143 YCHS 146

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE+  L+ + H NIV L +     +++Y+ ++ V GG+L  +I      +E+    ++ Q
Sbjct: 69  NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 78  IAMALQYLHSLMSVNQH-KP 96
           +  A+ YLH +  V++  KP
Sbjct: 129 VLDAVYYLHRMGIVHRDLKP 148

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L   + +    E    + L HPNIV L++S+  + + Y+  + V GG+L   I A    S
Sbjct: 49  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108
Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQH-KP 96
           E      + QI  A+ + H +  V+++ KP
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKP 138

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L   + +    E    + L HPNIV L++S+  + + Y+  + V GG+L   I A    S
Sbjct: 60  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 119
Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQ 93
           E      + QI  A+ + H +  V++
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHR 145

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	131
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-22
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-21
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-20
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-20
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-20
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-20
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-19
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-19
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-19
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-19
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-19
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-19
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-19
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-19
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	9e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-18
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-18
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-18
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-18
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-18
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-18
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-18
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-18
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	9e-18
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-17
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-17
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-17
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-17
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-17
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-17
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-17
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-17
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-17
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	9e-17
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-16
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-16
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-16
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-16
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-16
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-15
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-15
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-15
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-15
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-15
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	8e-15
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	8e-15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-14
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-14
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-14
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-14
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-14
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-13
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-13
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-13
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	8e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-13
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	9e-13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-12
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-12
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-12
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-12
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-11
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-10
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-10
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-10
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-10
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-10
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-10
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-10
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	7e-10
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	9e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-09
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-09
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-08
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-08
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-08
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	9e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-07
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-07
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-07
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-07
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-07
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 87.4 bits (217), Expect = 6e-22
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 1   MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K+VQ  + +D + R     E+D LK L+HPN++  Y S +  + + + LE    GDL  
Sbjct: 62  LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121

Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I+   K    + E T      Q+  AL+++HS
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 87.1 bits (216), Expect = 1e-21
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +KE+  + +  + R+    EV  L ++ HPNIV   ES     ++Y+ ++Y +GGDL  +
Sbjct: 54  IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113

Query: 60  IEAC--VKLSEETCKCIVYQIAMALQYLHS 87
           I A   V   E+       QI +AL+++H 
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLALKHVHD 143

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 84.7 bits (210), Expect = 1e-20
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           + +       E++ LK L+HP I+ +       ++ Y+ LE ++GG+L  K+    +L E
Sbjct: 180 EADPALNVETEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 238

Query: 69  ETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
            TCK   YQ+ +A+QYLH    +  H   KP
Sbjct: 239 ATCKLYFYQMLLAVQYLHENGII--HRDLKP 267

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 82.8 bits (205), Expect = 2e-20
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYES----VLWKDNIYMFLEYVQGGD 55
             E+Q   L K  R+ F  E + LK L HPNIV  Y+S    V  K  I +  E +  G 
Sbjct: 56  WCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGT 115

Query: 56  LKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           LK+ ++    +  +  +    QI   LQ+LH+
Sbjct: 116 LKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 82.3 bits (204), Expect = 3e-20
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLK 57
            KE+   ++ +  ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL 
Sbjct: 36  WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLA 95

Query: 58  SKIEACVK----LSEETCKCIVYQIAMALQYLHS 87
           S I    K    L EE    ++ Q+ +AL+  H 
Sbjct: 96  SVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 82.4 bits (204), Expect = 4e-20
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPN--IVTLYESVLWKDNIYMFLEYVQGGDLK 57
           +K V     D +    + NE+  L  L   +  I+ LY+  +    IYM +E     DL 
Sbjct: 57  IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLN 115

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           S ++    +     K     +  A+  +H 
Sbjct: 116 SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 81.0 bits (200), Expect = 2e-19
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESV--LWKDNIYMFLEYVQGGDLKS 58
           +K   N            E + LK L+H NIV L+         +  + +E+   G L +
Sbjct: 39  IKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYT 98

Query: 59  KIEA---CVKLSEETCKCIVYQIAMALQYLHSLM 89
            +E       L E     ++  +   + +L    
Sbjct: 99  VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 81.4 bits (201), Expect = 2e-19
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPN--IVTLYESVLWKDNIYMFLEYVQGGDLK 57
           +K V     D +    + NE+  L  L   +  I+ LY+  +    IYM +E     DL 
Sbjct: 85  IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLN 143

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           S ++    +     K     +  A+  +H 
Sbjct: 144 SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 81.7 bits (201), Expect = 2e-19
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGG 54
           +K+ +  L  +NR+ +  E+  +K L+HPN+V+  E       +   D   + +EY +GG
Sbjct: 44  IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 103

Query: 55  DLKSKI---EACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
           DL+  +   E C  L E   + ++  I+ AL+YLH    +
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRII 143

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 80.1 bits (198), Expect = 3e-19
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K  +       + +    EV     L  H ++V  + +    D++ +  EY  GG L  
Sbjct: 41  IKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLAD 100

Query: 59  KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
            I    +      E   K ++ Q+   L+Y+HS
Sbjct: 101 AISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 80.2 bits (198), Expect = 3e-19
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 3   EVQNALDKENRKYFA-----------NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYV 51
           EV    DK+     A            E+     LS P IV LY +V     + +F+E +
Sbjct: 73  EVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132

Query: 52  QGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           +GG L   I+    L E+     + Q    L+YLH+
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT 168

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 80.1 bits (198), Expect = 4e-19
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPN--IVTLYESVLWKDNIYMFLEYVQGGDLK 57
           +K V     D +    + NE+  L  L   +  I+ LY+  +    IYM +E     DL 
Sbjct: 38  IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLN 96

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           S ++    +     K     +  A+  +H 
Sbjct: 97  SWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 79.2 bits (196), Expect = 4e-19
 Identities = 22/70 (31%), Positives = 34/70 (48%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E+     + +
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117

Query: 78  IAMALQYLHS 87
           +A AL Y HS
Sbjct: 118 LANALSYCHS 127

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 79.5 bits (197), Expect = 4e-19
 Identities = 17/72 (23%), Positives = 32/72 (44%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E+   +SL+H ++V  +      D +++ LE  +   L    +    L+E   +  + Q
Sbjct: 64  MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 123

Query: 78  IAMALQYLHSLM 89
           I +  QYLH   
Sbjct: 124 IVLGCQYLHRNR 135

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 79.6 bits (197), Expect = 4e-19
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           + +       E++ LK L+HP I+ +       ++ Y+ LE ++GG+L  K+    +L E
Sbjct: 55  EADPALNVETEIEILKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113

Query: 69  ETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
            TCK   YQ+ +A+QYLH    +  H   KP
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGII--HRDLKP 142

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 79.3 bits (196), Expect = 8e-19
 Identities = 17/72 (23%), Positives = 32/72 (44%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E+   +SL+H ++V  +      D +++ LE  +   L    +    L+E   +  + Q
Sbjct: 90  MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149

Query: 78  IAMALQYLHSLM 89
           I +  QYLH   
Sbjct: 150 IVLGCQYLHRNR 161

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 79.5 bits (196), Expect = 9e-19
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESV--LWKDNIYMFLEYVQGGDLKS 58
           +K   N            E + LK L+H NIV L+         +  + +E+   G L +
Sbjct: 39  IKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYT 98

Query: 59  KIEA---CVKLSEETCKCIVYQIAMALQYLHSLM 89
            +E       L E     ++  +   + +L    
Sbjct: 99  VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 79.4 bits (196), Expect = 1e-18
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
            K +++    EV  LK L HPNI+ LYE    K   Y+  E   GG+L  +I +  + SE
Sbjct: 66  QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125

Query: 69  ETCKCIVYQIAMALQYLHSL 88
                I+ Q+   + Y+H  
Sbjct: 126 VDAARIIRQVLSGITYMHKN 145

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 23/81 (28%), Positives = 38/81 (46%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
              ++      EV+ LK L HPNI+ L+E +    + Y+  E   GG+L  +I    + S
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E     I+ Q+   + Y+H  
Sbjct: 120 EHDAARIIKQVFSGITYMHKH 140

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 19/70 (27%), Positives = 35/70 (50%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E++    L HPNI+ +Y     +  IY+ LE+   G+L  +++   +  E+     + +
Sbjct: 63  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122

Query: 78  IAMALQYLHS 87
           +A AL Y H 
Sbjct: 123 LADALHYCHE 132

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 79.0 bits (195), Expect = 2e-18
 Identities = 26/81 (32%), Positives = 40/81 (49%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           +   +      EV  LK L HPNI+ LY+    K N Y+ +E  +GG+L  +I   +K +
Sbjct: 75  VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN 134

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E     I+ Q+   + YLH  
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKH 155

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 78.2 bits (193), Expect = 2e-18
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL--------SEE 69
           NE+  +  + +   +T    +   D +Y+  EY++   +    E    L          +
Sbjct: 92  NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151

Query: 70  TCKCIVYQIAMALQYLHSLMSV 91
             KCI+  +  +  Y+H+  ++
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNI 173

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 77.8 bits (192), Expect = 2e-18
 Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVL----WKDNIYMFLEYVQGGDL 56
           +K +    ++++R+    E D  +  +HPNI+ L    L     K   ++ L + + G L
Sbjct: 59  LKRI-LCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117

Query: 57  KSKIEAC----VKLSEETCKCIVYQIAMALQYLHS 87
            ++IE        L+E+    ++  I   L+ +H+
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L   + +    E    + L HPNIV L++S+  +   Y+  + V GG+L   I A    S
Sbjct: 44  LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 103

Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
           E      + QI  ++ Y HS   V  H   KP
Sbjct: 104 EADASHCIQQILESIAYCHSNGIV--HRNLKP 133

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 77.7 bits (192), Expect = 2e-18
 Identities = 23/81 (28%), Positives = 38/81 (46%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
              ++      EV+ LK L HPNI+ L+E +    + Y+  E   GG+L  +I    + S
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E     I+ Q+   + Y+H  
Sbjct: 120 EHDAARIIKQVFSGITYMHKH 140

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 77.2 bits (191), Expect = 2e-18
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
           E+   F  E++ +KSL HPNI+ LYE+     +IY+ +E   GG+L  ++       E  
Sbjct: 48  EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107

Query: 71  CKCIVYQIAMALQYLHSLMSVNQH---KP 96
              I+  +  A+ Y H L     H   KP
Sbjct: 108 AARIMKDVLSAVAYCHKLNVA--HRDLKP 134

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 77.0 bits (190), Expect = 4e-18
 Identities = 26/84 (30%), Positives = 45/84 (53%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L+  + +    EV  +K L+HPNIV L+E +  +  +Y+ +EY  GG++   + A  ++ 
Sbjct: 53  LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK 112

Query: 68  EETCKCIVYQIAMALQYLHSLMSV 91
           E+  +    QI  A+QY H    V
Sbjct: 113 EKEARSKFRQIVSAVQYCHQKRIV 136

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 77.4 bits (191), Expect = 6e-18
 Identities = 27/84 (32%), Positives = 41/84 (48%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
            N   ++  +   NE+  LKSL HPNI+ L++    K   Y+  E+ +GG+L  +I    
Sbjct: 82  DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH 141

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
           K  E     I+ QI   + YLH  
Sbjct: 142 KFDECDAANIMKQILSGICYLHKH 165

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 76.6 bits (189), Expect = 8e-18
 Identities = 28/79 (35%), Positives = 36/79 (45%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
             ++K    E+  L  LSHPNI+ L E       I + LE V GG+L  +I      SE 
Sbjct: 89  TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER 148

Query: 70  TCKCIVYQIAMALQYLHSL 88
                V QI  A+ YLH  
Sbjct: 149 DAADAVKQILEAVAYLHEN 167

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 75.8 bits (187), Expect = 9e-18
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
                    +E R+    EVD L+ +S HPNI+ L ++       ++  + ++ G+L   
Sbjct: 55  GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
           +   V LSE+  + I+  +   +  LH L  V  H   KP
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNIV--HRDLKP 152

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 22/79 (27%), Positives = 38/79 (48%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
                   NE+  LK + H NIVTL +      + Y+ ++ V GG+L  +I      +E+
Sbjct: 47  AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 106

Query: 70  TCKCIVYQIAMALQYLHSL 88
               ++ Q+  A++YLH  
Sbjct: 107 DASLVIQQVLSAVKYLHEN 125

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 75.8 bits (187), Expect = 1e-17
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 1   MKEVQNA-LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
           +K   +     ++R     EV + + +  HP  V L ++      +Y+  E   G  L+ 
Sbjct: 87  VKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQ 145

Query: 59  KIEAC-VKLSEETCKCIVYQIAMALQYLHS 87
             EA    L E      +    +AL +LHS
Sbjct: 146 HCEAWGASLPEAQVWGYLRDTLLALAHLHS 175

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 75.3 bits (186), Expect = 1e-17
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +   +  + +E       EV+ L+ + HPNI+TL++    K ++ + LE V GG+L   +
Sbjct: 43  LSSSRRGVSREE---IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSL 88
                L+E+     + QI   + YLHS 
Sbjct: 100 AEKESLTEDEATQFLKQILDGVHYLHSK 127

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 75.7 bits (187), Expect = 1e-17
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           EV  LK L H NI+ L   +     +++  EY +  DLK  ++    +S    K  +YQ+
Sbjct: 83  EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQL 141

Query: 79  AMALQYLHS 87
              + + HS
Sbjct: 142 INGVNFCHS 150

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 75.3 bits (186), Expect = 1e-17
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+   K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114

Query: 79  AMALQYLHSLM 89
              + YLH + 
Sbjct: 115 MAGVVYLHGIG 125

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 75.4 bits (186), Expect = 2e-17
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+   K L+H N+V  Y      +  Y+FLEY  GG+L  +IE  + + E   +   +Q+
Sbjct: 55  EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114

Query: 79  AMALQYLHSLM 89
              + YLH + 
Sbjct: 115 MAGVVYLHGIG 125

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 75.4 bits (186), Expect = 2e-17
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L   + +    E    + L HPNIV L++S+  +   Y+  + V GG+L   I A    S
Sbjct: 67  LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 126

Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
           E      + QI  ++ Y HS   V  H   KP
Sbjct: 127 EADASHCIQQILESIAYCHSNGIV--HRNLKP 156

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 75.5 bits (186), Expect = 2e-17
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 10  KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           +E R+    E   L+ ++ HP+I+TL +S      +++  + ++ G+L   +   V LSE
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199

Query: 69  ETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
           +  + I+  +  A+ +LH+   V  H   KP
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIV--HRDLKP 228

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 28/87 (32%), Positives = 46/87 (52%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           +  +++    +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   + 
Sbjct: 47  RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA 106

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSL 88
               L+EE     + QI   + YLHSL
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSL 133

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 74.7 bits (184), Expect = 4e-17
 Identities = 25/87 (28%), Positives = 44/87 (50%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++ + +     R+    EV  L+ + HPNI+TL++    + ++ + LE V GG+L   + 
Sbjct: 48  RQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLA 107

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSL 88
               LSEE     + QI   + YLH+ 
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTK 134

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 74.2 bits (183), Expect = 5e-17
 Identities = 23/87 (26%), Positives = 44/87 (50%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           ++ + +    +R+    EV  L+ + H N++TL++    + ++ + LE V GG+L   + 
Sbjct: 48  RQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA 107

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSL 88
               LSEE     + QI   + YLH+ 
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTK 134

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 73.8 bits (182), Expect = 6e-17
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 9/103 (8%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K +     +   +    E++ LKSL HPNI+ ++E      N+Y+ +E  +GG+L  +I
Sbjct: 52  IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111

Query: 61  EACVK----LSEETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
            +       LSE     ++ Q+  AL Y HS   V  H   KP
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHSQHVV--HKDLKP 152

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 74.3 bits (183), Expect = 7e-17
 Identities = 23/81 (28%), Positives = 38/81 (46%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           L   + +    E    + L HPNIV L++S+  + + Y+  + V GG+L   I A    S
Sbjct: 49  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E      + QI  A+ + H +
Sbjct: 109 EADASHCIQQILEAVLHCHQM 129

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 73.6 bits (181), Expect = 9e-17
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSE 68
            ++++   NE+  +  L H N++ LY++   K++I + +EYV GG+L  +I +    L+E
Sbjct: 127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186

Query: 69  ETCKCIVYQIAMALQYLHSL 88
                 + QI   ++++H +
Sbjct: 187 LDTILFMKQICEGIRHMHQM 206

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 73.1 bits (180), Expect = 1e-16
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 16/101 (15%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-------------IYMF 47
           +K+++    +E      +EV  L SL+H  +V  Y + L + N             +++ 
Sbjct: 36  IKKIR--HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93

Query: 48  LEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS 87
           +EY + G L   I +  +    +    +  QI  AL Y+HS
Sbjct: 94  MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS 134

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 72.7 bits (179), Expect = 1e-16
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 19  EVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
           E+  LK L HPN+V L E VL    +D++YM  E V  G +  ++     LSE+  +   
Sbjct: 86  EIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPV-MEVPTLKPLSEDQARFYF 143

Query: 76  YQIAMALQYLHSLM 89
             +   ++YLH   
Sbjct: 144 QDLIKGIEYLHYQK 157

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 72.2 bits (178), Expect = 2e-16
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
           EV     L HP+I+ LY      + +Y+ LE    G++   ++  VK  SE   +  ++Q
Sbjct: 61  EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120

Query: 78  IAMALQYLHS 87
           I   + YLHS
Sbjct: 121 IITGMLYLHS 130

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 23/105 (21%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYES----------------VLWKDNI 44
           +K V+   + E  +    EV  L  L H NIV                           +
Sbjct: 41  IKRVK--YNNEKAE---REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL 95

Query: 45  YMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHS 87
           ++ +E+   G L+  IE     KL +     +  QI   + Y+HS
Sbjct: 96  FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS 140

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +KE+    D    +    E+   K L H NIV    S      I +F+E V GG L + +
Sbjct: 52  IKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 110

Query: 61  EA---CVKLSEETCKCIVYQIAMALQYLHS 87
            +    +K +E+T      QI   L+YLH 
Sbjct: 111 RSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 71.6 bits (176), Expect = 5e-16
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKC 73
            E      L HP+IV L E+      +YM  E++ G DL  +I          SE     
Sbjct: 75  REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134

Query: 74  IVYQIAMALQYLHSL 88
            + QI  AL+Y H  
Sbjct: 135 YMRQILEALRYCHDN 149

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 71.6 bits (176), Expect = 5e-16
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ N +SL HPNIV   E +L   ++ + +EY  GG+L  +I    + SE+  +    Q+
Sbjct: 66  EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125

Query: 79  AMALQYLHSLM 89
              + Y HS+ 
Sbjct: 126 LSGVSYCHSMQ 136

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 71.2 bits (175), Expect = 6e-16
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 19/104 (18%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--------------IYM 46
           +K ++    +  R+    EV  L  L HP IV  + +  W +               +Y+
Sbjct: 35  IKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA--WLEKNTTEKLQPSSPKVYLYI 92

Query: 47  FLEYVQGGDLKSKIEACVKLS---EETCKCIVYQIAMALQYLHS 87
            ++  +  +LK  +     +       C  I  QIA A+++LHS
Sbjct: 93  QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS 136

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 70.7 bits (174), Expect = 6e-16
 Identities = 25/73 (34%), Positives = 39/73 (53%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ NLK   HP+I+ LY+ +    + +M +EYV GG+L   I    ++ E   + +  QI
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120

Query: 79  AMALQYLHSLMSV 91
             A+ Y H  M V
Sbjct: 121 LSAVDYCHRHMVV 133

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 71.7 bits (176), Expect = 6e-16
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 8   LDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVK 65
           +  E   +   EV  L+    HPN++  + +   +   Y+ +E      L+  +E     
Sbjct: 56  ILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFA 114

Query: 66  LSEETCKCIVYQIAMALQYLHSL 88
                   ++ Q    L +LHSL
Sbjct: 115 HLGLEPITLLQQTTSGLAHLHSL 137

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 71.7 bits (176), Expect = 6e-16
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSE 68
             ++    NE+  +  L HP ++ L+++   K  + + LE++ GG+L  +I     K+SE
Sbjct: 89  PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE 148

Query: 69  ETCKCIVYQIAMALQYLHSL 88
                 + Q    L+++H  
Sbjct: 149 AEVINYMRQACEGLKHMHEH 168

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 71.4 bits (175), Expect = 7e-16
 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSE 68
           + +++    E+  +  L HP +V L+++    + + M  E++ GG+L  K+ +   K+SE
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE 254

Query: 69  ETCKCIVYQIAMALQYLHSL 88
           +     + Q+   L ++H  
Sbjct: 255 DEAVEYMRQVCKGLCHMHEN 274

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 70.9 bits (174), Expect = 9e-16
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLE-YVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           E+  L  + H NI+ + +    +    + +E +  G DL + I+   +L E     I  Q
Sbjct: 79  EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138

Query: 78  IAMALQYLHSLMSV 91
           +  A+ YL     +
Sbjct: 139 LVSAVGYLRLKDII 152

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  L+ LSHPNI+ L ++   K NI +  ++++  DL+  I+   + L+    K  +  
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM 120

Query: 78  IAMALQYLHS 87
               L+YLH 
Sbjct: 121 TLQGLEYLHQ 130

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 70.2 bits (172), Expect = 2e-15
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+ NLK   HP+I+ LY+ +    +I+M +EYV GG+L   I    +L E+  + +  QI
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125

Query: 79  AMALQYLHSLMSV 91
              + Y H  M V
Sbjct: 126 LSGVDYCHRHMVV 138

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L HPN+V L E    K  +++  EY     +  +++     + E   K I +Q
Sbjct: 52  EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQRGVPEHLVKSITWQ 110

Query: 78  IAMALQYLHS 87
              A+ + H 
Sbjct: 111 TLQAVNFCHK 120

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 69.8 bits (171), Expect = 3e-15
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 8   LDKENRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA---- 62
           +  +       E+  L +S  HPN++  Y S      +Y+ LE     +L+  +E+    
Sbjct: 47  MLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVS 105

Query: 63  ---CVKLSEETCKCIVYQIAMALQYLHSLMSVNQH---KP 96
                   E     ++ QIA  + +LHSL  +  H   KP
Sbjct: 106 DENLKLQKEYNPISLLRQIASGVAHLHSLKII--HRDLKP 143

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 69.2 bits (170), Expect = 3e-15
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSE 68
             ++     E+  L    H NI+ L+ES    + + M  E++ G D+  +I  +  +L+E
Sbjct: 42  GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE 101

Query: 69  ETCKCIVYQIAMALQYLHSL 88
                 V+Q+  ALQ+LHS 
Sbjct: 102 REIVSYVHQVCEALQFLHSH 121

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 68.3 bits (168), Expect = 5e-15
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVY 76
           E+  LK L+HPNIV L + +  ++ +Y+  E++   DLK  ++A     +     K  ++
Sbjct: 52  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF 110

Query: 77  QIAMALQYLHS 87
           Q+   L + HS
Sbjct: 111 QLLQGLAFCHS 121

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 68.4 bits (168), Expect = 5e-15
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           EV  LK L H NIVTL++ +  + ++ +  EY+   DLK  ++ C   ++    K  ++Q
Sbjct: 50  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQ 108

Query: 78  IAMALQYLHS 87
           +   L Y H 
Sbjct: 109 LLRGLAYCHR 118

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 68.5 bits (168), Expect = 6e-15
 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 3   EVQNALDKENRKYFA-------------NEVDNLKSLS-HPNIVTLYESVLWKDNIYMFL 48
             +  + K++ + FA              E+  LK    HPNIV L+E    + + ++ +
Sbjct: 26  ICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85

Query: 49  EYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           E + GG+L  +I+     SE     I+ ++  A+ ++H +
Sbjct: 86  ELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 68.0 bits (167), Expect = 8e-15
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L H N+V L E    K   Y+  E+V    +   +E     L  +  +  ++Q
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFPNGLDYQVVQKYLFQ 132

Query: 78  IAMALQYLHS 87
           I   + + HS
Sbjct: 133 IINGIGFCHS 142

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 68.1 bits (167), Expect = 8e-15
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 17/103 (16%)

Query: 3   EVQNALDKENRKYFA----------------NEVDNLKSLS-HPNIVTLYESVLWKDNIY 45
            VQ  ++    + +A                 EV+ L     H N++ L E    +D  Y
Sbjct: 28  RVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87

Query: 46  MFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +  E ++GG + S I      +E     +V  +A AL +LH+ 
Sbjct: 88  LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK 130

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 68.0 bits (167), Expect = 8e-15
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L HPNIV+L + +  +  + +  E+++  DLK  ++     L +   K  +YQ
Sbjct: 69  EISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQ 127

Query: 78  IAMALQYLHS 87
           +   + + H 
Sbjct: 128 LLRGVAHCHQ 137

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 67.5 bits (166), Expect = 1e-14
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L H NIV LY+ +  K  + +  E++   DLK  ++ C   L   T K  + Q
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQ 108

Query: 78  IAMALQYLHS 87
           +   + Y H 
Sbjct: 109 LLNGIAYCHD 118

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 67.5 bits (166), Expect = 1e-14
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
           E+  LK L H NIV L++ +     + +  E+    DLK   ++C   L  E  K  ++Q
Sbjct: 51  EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQ 109

Query: 78  IAMALQYLHS 87
           +   L + HS
Sbjct: 110 LLKGLGFCHS 119

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 19  EVDNLKSLSH--PNIVTLYESVLWKDNIYMFLEYVQG-GDLKSKIEACVKLSEETCKCIV 75
           EV  LK +S     ++ L +     D+  + LE  +   DL   I     L EE  +   
Sbjct: 96  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155

Query: 76  YQIAMALQYLHSLM 89
           +Q+  A+++ H+  
Sbjct: 156 WQVLEAVRHCHNCG 169

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 66.9 bits (164), Expect = 2e-14
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 19  EVDNLKSLS----HPNIVTLYESVLWKDNIYMFLEY-VQGGDLKSKIEACVKLSEETCKC 73
           EV  L  +     HP ++ L +    ++   + LE  +   DL   I     L E   +C
Sbjct: 84  EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143

Query: 74  IVYQIAMALQYLHSLM 89
              Q+  A+Q+ HS  
Sbjct: 144 FFGQVVAAIQHCHSRG 159

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 3   EVQNALDKENRKYFA------------NEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLE 49
             +  + K     FA             E++ L     HPNI+TL +       +Y+  E
Sbjct: 37  VCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96

Query: 50  YVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
            ++GG+L  KI      SE     +++ I   ++YLH+ 
Sbjct: 97  LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 65.8 bits (161), Expect = 4e-14
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 18/104 (17%)

Query: 3   EVQNALDKENRKYFA-----------NEVDNLKSLS-HPNIVTLYE----SVLWKDNIYM 46
           +V    +K  ++ FA            EV+     S  P+IV + +        +  + +
Sbjct: 33  KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92

Query: 47  FLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQIAMALQYLHSL 88
            +E + GG+L S+I+       +E     I+  I  A+QYLHS+
Sbjct: 93  VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 66.1 bits (162), Expect = 4e-14
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 8   LDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI--EACV 64
             ++ R    +E+  L+     P ++ L+E       I + LEY  GG++ S    E   
Sbjct: 67  RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE 126

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
            +SE     ++ QI   + YLH  
Sbjct: 127 MVSENDVIRLIKQILEGVYYLHQN 150

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 65.4 bits (160), Expect = 7e-14
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           MKE+    D+E ++ F  EV  ++ L HPN++     +     +    EY++GG L+  I
Sbjct: 40  MKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII 98

Query: 61  -EACVKLSEETCKCIVYQIAMALQYLHS 87
                +            IA  + YLHS
Sbjct: 99  KSMDSQYPWSQRVSFAKDIASGMAYLHS 126

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 65.4 bits (160), Expect = 7e-14
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 18/104 (17%)

Query: 3   EVQNALDKENRKYFA-----------NEVDNLKSLS-HPNIVTLYE----SVLWKDNIYM 46
           +V     +   +  A            EVD+    S  P+IV + +        K  + +
Sbjct: 44  KVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103

Query: 47  FLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQIAMALQYLHSL 88
            +E ++GG+L S+I+       +E     I+  I  A+Q+LHS 
Sbjct: 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 65.5 bits (160), Expect = 8e-14
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 18/104 (17%)

Query: 3   EVQNALDKENRKYFA-----------NEVDNLKSLS-HPNIVTLYE----SVLWKDNIYM 46
           +V    +K  ++ FA            EV+     S  P+IV + +        +  + +
Sbjct: 77  KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136

Query: 47  FLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQIAMALQYLHSL 88
            +E + GG+L S+I+       +E     I+  I  A+QYLHS+
Sbjct: 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
           E+  LK L HP+I+ LY+ +    +I M +EY  GG+L   I    +++E+  +    QI
Sbjct: 59  EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI 117

Query: 79  AMALQYLHSLMSV 91
             A++Y H    V
Sbjct: 118 ICAIEYCHRHKIV 130

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK------LSEETCK 72
           E+  +K L H NIV LY+ +  ++ + +  E++   DLK  +++         L     K
Sbjct: 53  EISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVK 111

Query: 73  CIVYQIAMALQYLHS 87
              +Q+   L + H 
Sbjct: 112 YFQWQLLQGLAFCHE 126

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC---------VKLS 67
           E+  L+ L HPN+++L +  L      +++  +Y +  DL   I+           V+L 
Sbjct: 68  EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLP 126

Query: 68  EETCKCIVYQIAMALQYLHS 87
               K ++YQI   + YLH+
Sbjct: 127 RGMVKSLLYQILDGIHYLHA 146

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 63.7 bits (155), Expect = 4e-13
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI-----YMFLEYVQGGDL 56
           K + ++ D E +     E   L  + HP+IV ++  V   D       Y+ +EYV G  L
Sbjct: 112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171

Query: 57  KSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           K       KL        + +I  AL YLHS
Sbjct: 172 KRSKGQ--KLPVAEAIAYLLEILPALSYLHS 200

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 62.7 bits (153), Expect = 7e-13
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
           NE   L++++ P +V L  S     N+YM +EYV GG++ S +    + SE   +    Q
Sbjct: 90  NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149

Query: 78  IAMALQYLHSL 88
           I +  +YLHSL
Sbjct: 150 IVLTFEYLHSL 160

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 62.6 bits (153), Expect = 7e-13
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 19/104 (18%)

Query: 4   VQNALDKENRKYFA------------NEVDN-------LKSLSHPNIVTLYESVLWKDNI 44
           V  A +    + +A            N+V         +  L HP  V LY +    + +
Sbjct: 46  VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 105

Query: 45  YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           Y  L Y + G+L   I       E   +    +I  AL+YLH  
Sbjct: 106 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 62.5 bits (153), Expect = 8e-13
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 19/98 (19%)

Query: 10  KENRKYFA------------NEVDN-------LKSLSHPNIVTLYESVLWKDNIYMFLEY 50
           + N +Y+A             +V++       L  ++HP I+ ++ +      I+M ++Y
Sbjct: 28  RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87

Query: 51  VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           ++GG+L S +    +      K    ++ +AL+YLHS 
Sbjct: 88  IEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 62.3 bits (152), Expect = 8e-13
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            +   +    +  +    E      L HPNI+ L    L + N+ + +E+ +GG L   +
Sbjct: 38  ARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
            +  ++  +       QIA  + YLH 
Sbjct: 98  -SGKRIPPDILVNWAVQIARGMNYLHD 123

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 62.3 bits (152), Expect = 9e-13
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACV 64
              E    F  EV  +K L HPNIV    +V    N+ +  EY+  G L     K  A  
Sbjct: 73  FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
           +L E     + Y +A  + YLH+
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHN 155

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 19  EVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGG--DLKSKIEACVKLSEETCKC 73
           E+  L+ L H N++ L + VL+   K  +YM +EY   G  ++   +    +        
Sbjct: 56  EIQLLRRLRHKNVIQLVD-VLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHG 113

Query: 74  IVYQIAMALQYLHSLM 89
              Q+   L+YLHS  
Sbjct: 114 YFCQLIDGLEYLHSQG 129

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 62.0 bits (151), Expect = 1e-12
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCI 74
           +  E++ L +  HP IV L  +      +++ +E+  GG + + +    + L+E   + +
Sbjct: 63  YIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 122

Query: 75  VYQIAMALQYLHS 87
             Q+  AL +LHS
Sbjct: 123 CRQMLEALNFLHS 135

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 19/98 (19%)

Query: 10  KENRKYFA------------NEVDN-------LKSLSHPNIVTLYESVLWKDNIYMFLEY 50
            + +K +A            NEV N       ++ L HP +V L+ S   +++++M ++ 
Sbjct: 37  NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96

Query: 51  VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           + GGDL+  ++  V   EET K  + ++ MAL YL + 
Sbjct: 97  LLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 62.3 bits (151), Expect = 1e-12
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 6/93 (6%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL---- 56
           +K  + A   E        ++ LK       +  Y + L+++   +  E    G L    
Sbjct: 100 LKVQKPANPWE-FYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

Query: 57  -KSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
              K      + +        ++   ++ +H  
Sbjct: 159 NLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC 191

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 26/81 (32%), Positives = 39/81 (48%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
              +E  K F  EV N   LSH NIV++ +     D  Y+ +EY++G  L   IE+   L
Sbjct: 49  REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPL 108

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           S +T      QI   +++ H 
Sbjct: 109 SVDTAINFTNQILDGIKHAHD 129

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 19  EVDNLKSLSHPNIVTLYESV--------LWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEE 69
           E+  L+ L H N+V L E            K +IY+  ++ +  DL   +    VK +  
Sbjct: 66  EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLS 124

Query: 70  TCKCIVYQIAMALQYLHS 87
             K ++  +   L Y+H 
Sbjct: 125 EIKRVMQMLLNGLYYIHR 142

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
                E  + F  EV  + +L+HPNIV LY  +   +   M +E+V  GDL  ++ +   
Sbjct: 60  ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAH 117

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
            +       ++  IA+ ++Y+ + 
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQ 141

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 61.7 bits (150), Expect = 2e-12
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVL-------WKDNIYMFLEYVQ 52
           +K +  + ++E  +    EV  +K LS HPNIV    +              ++ L  + 
Sbjct: 58  LKRL-LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC 116

Query: 53  GG---DLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
            G   +   K+E+   LS +T   I YQ   A+Q++H  
Sbjct: 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKL 66
            +++  K F  EV   +   H N+V    + +   ++ +     +G  L S + +A + L
Sbjct: 68  DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVL 127

Query: 67  SEETCKCIVYQIAMALQYLHS 87
                + I  +I   + YLH+
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHA 148

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACVK 65
            +  RK F  E+  L  ++HPNIV LY + L  + + + +EY +GG L +     E    
Sbjct: 41  SESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPY 98

Query: 66  LSEETCKCIVYQIAMALQYLHSL 88
            +         Q +  + YLHS+
Sbjct: 99  YTAAHAMSWCLQCSQGVAYLHSM 121

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 61.0 bits (148), Expect = 3e-12
 Identities = 27/127 (21%), Positives = 40/127 (31%), Gaps = 40/127 (31%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K     ++ ++ +    EV  +K L HPNI  LYE    +  I + +E   GG L  K+ 
Sbjct: 61  KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120

Query: 61  ---------------------------------------EACVKLSEETCKCIVYQIAMA 81
                                                         E+    I+ QI  A
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180

Query: 82  LQYLHSL 88
           L YLH+ 
Sbjct: 181 LHYLHNQ 187

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 22  NLKSLSHPNIVTLYE-----SVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCI 74
           +L++  HPN+V L++         +  + +  E+V   DL + ++      +  ET K +
Sbjct: 67  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM 125

Query: 75  VYQIAMALQYLHS 87
           ++Q+   L +LHS
Sbjct: 126 MFQLLRGLDFLHS 138

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 59.9 bits (145), Expect = 8e-12
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--L 66
             E   +   E+   K  +HPNIV    + +  + +++   ++  G  K  I       +
Sbjct: 66  SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 125

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +E     I+  +  AL Y+H 
Sbjct: 126 NELAIAYILQGVLKALDYIHH 146

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 59.5 bits (145), Expect = 8e-12
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 22  NLKSLSHPNIVTLYE-----SVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCI 74
            L++  HPN+V L +         +  + +  E+V   DL++ ++      L  ET K +
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125

Query: 75  VYQIAMALQYLHS 87
           + Q    L +LH+
Sbjct: 126 MRQFLRGLDFLHA 138

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
           + D   R     E      L  P++V +++       +Y+ +  + G DL + +     L
Sbjct: 72  SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPL 131

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +      IV QI  AL   H+
Sbjct: 132 APPRAVAIVRQIGSALDAAHA 152

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 8   LDKENRK-YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
           L K+ R+    NEV  ++   H N+V +Y+S L  + +++ +E++QGG L   +    +L
Sbjct: 80  LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RL 138

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +EE    +   +  AL YLH+
Sbjct: 139 NEEQIATVCEAVLQALAYLHA 159

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 58.6 bits (142), Expect = 2e-11
 Identities = 19/85 (22%), Positives = 28/85 (32%)

Query: 3   EVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA 62
                   E  +    EV  L+ L HPN +      L +   ++ +EY  G         
Sbjct: 88  SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH 147

Query: 63  CVKLSEETCKCIVYQIAMALQYLHS 87
              L E     + +     L YLHS
Sbjct: 148 KKPLQEVEIAAVTHGALQGLAYLHS 172

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
            E+  L     P +   Y S L    +++ +EY+ GG     +E    L E     I+ +
Sbjct: 69  QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILRE 127

Query: 78  IAMALQYLHS 87
           I   L YLHS
Sbjct: 128 ILKGLDYLHS 137

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVY 76
            E+  ++    P++V  Y S     ++++ +EY   G +   I    K L+E+    I+ 
Sbjct: 73  KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ 132

Query: 77  QIAMALQYLHS 87
                L+YLH 
Sbjct: 133 STLKGLEYLHF 143

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLY----ESVLWKDNIYMFLEYVQGGDLKSKIEA 62
           A D      F  E  N  +L+HP IV +Y             Y+ +EYV G  L+  +  
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT 109

Query: 63  CVKLSEETCKCIVYQIAMALQYLHS 87
              ++ +    ++     AL + H 
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQ 134

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
            +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   +     + E
Sbjct: 57  QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDE 115

Query: 69  ETCKCIVYQIAMALQYLHS 87
                +  +   AL++LHS
Sbjct: 116 GQIAAVCRECLQALEFLHS 134

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 58.3 bits (141), Expect = 3e-11
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 19  EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
           E+  L  L+H ++V +      + V   D +Y+ LE     D K      V L+E   K 
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKT 160

Query: 74  IVYQIAMALQYLHS 87
           ++Y + + ++Y+HS
Sbjct: 161 LLYNLLVGVKYVHS 174

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKI--EAC 63
                 + F  E   L+  SHPN++ +  +       +  +   ++  G L + +     
Sbjct: 46  WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN 105

Query: 64  VKLSEETCKCIVYQIAMALQYLHSL 88
             + +         +A  + +LH+L
Sbjct: 106 FVVDQSQAVKFALDMARGMAFLHTL 130

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 56.4 bits (136), Expect = 1e-10
 Identities = 17/87 (19%), Positives = 33/87 (37%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            K +   +    R     E+  L   + P IV  Y +      I + +E++ GG L   +
Sbjct: 63  RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 122

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
           +   ++ E+    +   +   L YL  
Sbjct: 123 KKAGRIPEQILGKVSIAVIKGLTYLRE 149

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKL 66
              +  + F NEV  L+   H NI+           + +  ++ +G  L   +  +  K 
Sbjct: 59  PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKF 117

Query: 67  SEETCKCIVYQIAMALQYLHS 87
             +    I  Q A  + YLH+
Sbjct: 118 EMKKLIDIARQTARGMDYLHA 138

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 20/105 (19%)

Query: 4   VQNALDKENRKYFA-------------NEVDN-------LKSLSHPNIVTLYESVLWKDN 43
           V+        K FA              +  +       L+ + HP IV L  +      
Sbjct: 36  VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95

Query: 44  IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +Y+ LEY+ GG+L  ++E      E+T    + +I+MAL +LH  
Sbjct: 96  LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 55.5 bits (134), Expect = 3e-10
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 19  EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
           E+  L  L    I+ LY     + +L  D +Y+ LE     DLK   +  + L+EE  K 
Sbjct: 75  EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKT 133

Query: 74  IVYQIAMALQYLHS 87
           I+Y + +   ++H 
Sbjct: 134 ILYNLLLGENFIHE 147

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 23/66 (34%), Positives = 43/66 (65%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           L  ++HP IV L+ +   +  +Y+ L++++GGDL +++   V  +EE  K  + ++A+AL
Sbjct: 80  LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139

Query: 83  QYLHSL 88
            +LHSL
Sbjct: 140 DHLHSL 145

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 20/99 (20%)

Query: 10  KENRKYFA------------NEVDNLK--------SLSHPNIVTLYESVLWKDNIYMFLE 49
           K+  ++FA            ++V+           +  HP +  ++ +   K+N++  +E
Sbjct: 39  KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98

Query: 50  YVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           Y+ GGDL   I++C K           +I + LQ+LHS 
Sbjct: 99  YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 3e-10
 Identities = 14/66 (21%), Positives = 29/66 (43%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           + +   P IV +  +    D +   L+ + GGDL   +      SE   +    +I + L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305

Query: 83  QYLHSL 88
           +++H+ 
Sbjct: 306 EHMHNR 311

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKL 66
           L +     F  E D L +     I TL+ +    +N+Y+ ++Y  GGDL + +     +L
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL 172

Query: 67  SEETCKCIVYQIAMALQYLHSL 88
            EE  +  + ++ +A+  +H L
Sbjct: 173 PEEMARFYLAEMVIAIDSVHQL 194

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 25/110 (22%)

Query: 3   EVQNALDKENRKYFA-----------------NEVDNLKSLSHPNIVTLYESVLWKDNIY 45
            VQ A     ++  A                  E+  +    HPNIV+ Y S + KD ++
Sbjct: 30  VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89

Query: 46  MFLEYVQGG---DL-----KSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           + ++ + GG   D+              L E T   I+ ++   L+YLH 
Sbjct: 90  LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 15/81 (18%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
             A D   +     E + ++ L +P IV +   +   ++  + +E  + G L   ++   
Sbjct: 54  NEANDPALKDELLAEANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNR 112

Query: 65  KLSEETCKCIVYQIAMALQYL 85
            + ++    +V+Q++M ++YL
Sbjct: 113 HVKDKNIIELVHQVSMGMKYL 133

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 16/98 (16%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTL----YESVLWKDNIYMFL--EYVQGG 54
           +K+V      +NR     E+  ++ + HPN+V L    Y +   KD +++ L  EYV   
Sbjct: 69  IKKVLQDKRFKNR-----ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE- 122

Query: 55  DLKSKIEACVK----LSEETCKCIVYQIAMALQYLHSL 88
            +        K    +     K  +YQ+  +L Y+HS+
Sbjct: 123 TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.8 bits (132), Expect = 5e-10
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 8   LDKENRKYFANEVD--NLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKI 60
               NR+ F NE +   +  + H NI          +   +    + +EY   G L   +
Sbjct: 44  FSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS-LMSVNQHKPRYI 99
                    +   + + +   L YLH+ L   + +KP   
Sbjct: 104 SL-HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 14/99 (14%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGG 54
           +K   + +   + + F  E   +K   HP++  L        +        + L +++ G
Sbjct: 59  LKA--DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116

Query: 55  DLKS------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
           DL +        E    L  +T    +  IA  ++YL S
Sbjct: 117 DLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS 155

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 54.7 bits (132), Expect = 5e-10
 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
           + + +  +F  E D +   + P +V L+ +      +YM +EY+ GGDL + +     + 
Sbjct: 108 IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVP 166

Query: 68  EETCKCIVYQIAMALQYLHSL 88
           E+  +    ++ +AL  +HS+
Sbjct: 167 EKWARFYTAEVVLALDAIHSM 187

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 1   MKEVQNALDKENRKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGG---DL 56
           +K ++  ++ + +K    ++D +++++  P  VT Y ++  + ++++ +E +        
Sbjct: 37  VKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFY 96

Query: 57  KSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
           K  I+    + E+    I   I  AL++LHS +SV
Sbjct: 97  KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 16/88 (18%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYE---SVLWKDN---IYMFLEYVQGGDLKSKIEACV 64
           +NR     E+  ++ L H NIV L     S   K +   + + L+YV    +        
Sbjct: 94  KNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYS 147

Query: 65  K----LSEETCKCIVYQIAMALQYLHSL 88
           +    L     K  +YQ+  +L Y+HS 
Sbjct: 148 RAKQTLPVIYVKLYMYQLFRSLAYIHSF 175

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 54.3 bits (131), Expect = 7e-10
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKL 66
           L +     F  E D L +     I  L+ +   ++ +Y+ +EY  GGDL + +     ++
Sbjct: 100 LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI 159

Query: 67  SEETCKCIVYQIAMALQYLHSL 88
             E  +  + +I MA+  +H L
Sbjct: 160 PAEMARFYLAEIVMAIDSVHRL 181

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 54.3 bits (131), Expect = 7e-10
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 1   MKEVQNALDKENRKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K+++ + +KE  K    ++D  LKS   P IV  + + +   ++++ +E +     K K
Sbjct: 55  VKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLK 114

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
                 + E     +   I  AL YL     V
Sbjct: 115 KRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 54.3 bits (131), Expect = 7e-10
 Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSK 59
           K ++     ++R  +  E+D L++L H +I+             + + +EYV  G L+  
Sbjct: 66  KALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHS 87
           +     +          QI   + YLH+
Sbjct: 126 LPRH-SIGLAQLLLFAQQICEGMAYLHA 152

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 54.2 bits (131), Expect = 8e-10
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
           LK++ HP +V L+ S    D +Y  L+Y+ GG+L   ++      E   +    +IA AL
Sbjct: 93  LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL 152

Query: 83  QYLHSL 88
            YLHSL
Sbjct: 153 GYLHSL 158

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 53.9 bits (130), Expect = 8e-10
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 8   LDKENRKYFANEVD--NLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKIE 61
               + K +  E +  N   L H NI+    S +   +    +++   Y + G L   + 
Sbjct: 39  FSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL- 97

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKP 96
               L   +C  IV  IA  L +LH  +   Q KP
Sbjct: 98  QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 54.0 bits (130), Expect = 9e-10
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 8   LDKENRKYFANEVD--NLKSLSHPNIVTLYESVLWKDNIYMFL----EYVQGGDLKSKIE 61
                 + +  E +      L H NI+    +    +  +  L    +Y + G L   + 
Sbjct: 73  FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 132

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKP 96
               ++ E    +    A  L +LH  +   Q KP
Sbjct: 133 R-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 54.0 bits (130), Expect = 9e-10
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 19/101 (18%)

Query: 10  KENRKYFA------------NEVDN-------LKSLSHPNIVTLYESVLWKDNIYMFLEY 50
           K   +Y+A            +EV +       L++  HP +  L  S    D +   +EY
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229

Query: 51  VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
             GG+L   +      SE+  +    +I  AL YLHS  +V
Sbjct: 230 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 270

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K  +  L  + +  F  E   LK  SHPNIV L      K  IY+ +E VQGGD  + + 
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
               +L  +T   +V   A  ++YL S
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLES 231

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 10/94 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           + E     +++    F  E   +   +H NIV      L     ++ LE + GGDLKS  
Sbjct: 109 LPE--VCSEQD-ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

Query: 59  -----KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                +      L+      +   IA   QYL  
Sbjct: 166 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 199

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 20/99 (20%)

Query: 10  KENRKYFA------------NEVDNLKS--------LSHPNIVTLYESVLWKDNIYMFLE 49
           K   + +A            ++V+               P +  L+      D +Y  +E
Sbjct: 42  KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101

Query: 50  YVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           YV GGDL   I+   +  E        +IA+ L +L S 
Sbjct: 102 YVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 17/61 (27%), Positives = 36/61 (59%)

Query: 28  HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
            P +VTL+ +   +  +++ L+Y+ GG+L + +    + +E   +  V +I +AL++LH 
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK 177

Query: 88  L 88
           L
Sbjct: 178 L 178

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 19/98 (19%)

Query: 10  KENRKYFA------------NEVDN-------LKSLSHPNIVTLYESVLWKDNIYMFLEY 50
           K   +Y+A            +EV +       L++  HP +  L  +    D +   +EY
Sbjct: 27  KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86

Query: 51  VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
             GG+L   +      +EE  +    +I  AL+YLHS 
Sbjct: 87  ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 20/99 (20%)

Query: 10  KENRKYFA------------NEVDNLKS--------LSHPNIVTLYESVLWKDNIYMFLE 49
           K   + +A            ++V+               P +  L+      D +Y  +E
Sbjct: 363 KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422

Query: 50  YVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           YV GGDL   I+   +  E        +IA+ L +L S 
Sbjct: 423 YVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 10/94 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           + E     +++    F  E   +   +H NIV      L     ++ +E + GGDLKS  
Sbjct: 68  LPE--VCSEQD-ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

Query: 59  -----KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                +      L+      +   IA   QYL  
Sbjct: 125 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 20/99 (20%)

Query: 10  KENRKYFA------------NEVDNLKS--------LSHPNIVTLYESVLWKDNIYMFLE 49
           KE    +A            ++V+   +         +HP +  L+      D ++  +E
Sbjct: 45  KETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104

Query: 50  YVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +V GGDL   I+   +  E   +    +I  AL +LH  
Sbjct: 105 FVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 8   LDKENRKYFANEVD--NLKSLSHPNIVTLY----ESVLWKDNIYMFLEYVQGGDLKSKIE 61
                   +  E +      + H NI+       +       +Y+  +Y + G L   ++
Sbjct: 68  FFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK 127

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKP 96
           +   L  ++   + Y     L +LH+ +   Q KP
Sbjct: 128 ST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 52.0 bits (125), Expect = 5e-09
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
            ++ +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 166

Query: 83  QYLHSL 88
            YLH  
Sbjct: 167 NYLHER 172

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.5 bits (124), Expect = 5e-09
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 13/97 (13%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           + E   A  +E R  F NE   +K  +  ++V L   V       + +E +  GDLKS  
Sbjct: 63  VNE--AASMRE-RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

Query: 59  --------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                           S      +  +IA  + YL++
Sbjct: 120 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA 156

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 11/90 (12%)

Query: 8   LDKENRKYFANEVDNLKSLS-HPNIVTLYESVL------WKDNIYMFLEYVQGG---DLK 57
           +  +  +    E++ LK  S H NI T Y + +        D +++ +E+   G   DL 
Sbjct: 59  VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL- 117

Query: 58  SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
            K      L EE    I  +I   L +LH 
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLHQ 147

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 23  LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
            ++ +HP +V L+     +  ++  +EYV GGDL   ++   KL EE  +    +I++AL
Sbjct: 64  EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123

Query: 83  QYLHSL 88
            YLH  
Sbjct: 124 NYLHER 129

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 51.2 bits (123), Expect = 8e-09
 Identities = 17/96 (17%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 1   MKEVQNALDKENRKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGG---DL 56
           +K +++ +D++ +K    ++D  ++S   P IV  Y ++  + + ++ +E +        
Sbjct: 52  VKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFY 111

Query: 57  KSKIEACVK-LSEETCKCIVYQIAMALQYLHSLMSV 91
           K         + EE    I      AL +L   + +
Sbjct: 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKENLKI 147

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 51.3 bits (123), Expect = 8e-09
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
           F  E   +K + HPN+V L      +   Y+  E++  G+L    +     ++S      
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322

Query: 74  IVYQIAMALQYLHS 87
           +  QI+ A++YL  
Sbjct: 323 MATQISSAMEYLEK 336

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSK 59
           K ++      +      E++ L++L H NIV           + I + +E++  G LK  
Sbjct: 56  KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 115

Query: 60  IEAC-VKLSEETCKCIVYQIAMALQYLHS 87
           +     K++ +       QI   + YL S
Sbjct: 116 LPKNKNKINLKQQLKYAVQICKGMDYLGS 144

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 23/112 (20%), Positives = 32/112 (28%), Gaps = 27/112 (24%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           +KE   A     +  F  E   +    +PNIV L         + +  EY+  GDL    
Sbjct: 85  LKE--EASADM-QADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

Query: 59  ----------------------KIEACVKLSEETCKCIVYQIAMALQYLHSL 88
                                        LS     CI  Q+A  + YL   
Sbjct: 142 RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEAC-VKLS 67
           E+ + F  E++ LKSL H NIV          + N+ + +EY+  G L+  ++    ++ 
Sbjct: 84  EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 143

Query: 68  EETCKCIVYQIAMALQYLHS 87
                    QI   ++YL +
Sbjct: 144 HIKLLQYTSQICKGMEYLGT 163

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 2/80 (2%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
            L  +  +   +    L  +  P +  + + V  +    +  E+++GG L+   +     
Sbjct: 69  VLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP-S 127

Query: 67  SEETCKCIVYQIAMALQYLH 86
                +  +  +A A    H
Sbjct: 128 PVGAIR-AMQSLAAAADAAH 146

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEE 69
           + R+ F  E   +    HPNI+ L   V     + +  EY++ G L S + +   + +  
Sbjct: 88  KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147

Query: 70  TCKCIVYQIAMALQYLHS 87
               ++  IA  ++YL  
Sbjct: 148 QLVGMLRGIASGMKYLSD 165

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 50.4 bits (120), Expect = 1e-08
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLY--ESVLWKDNIYMFLEYVQ------ 52
           ++ ++N    +    F    D +K      ++ +   E  +W  + +     +Q      
Sbjct: 130 LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTF 189

Query: 53  GGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           G  L S       L       +  Q+   L  LH 
Sbjct: 190 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH 224

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 16/102 (15%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--- 58
           K ++ A +   R+ F  E + L  L H +IV  +        + M  EY++ GDL     
Sbjct: 77  KALKEASESA-RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 135

Query: 59  ------------KIEACVKLSEETCKCIVYQIAMALQYLHSL 88
                       +  A   L       +  Q+A  + YL  L
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 177

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K ++   +K + +    E   +  L +P IV L   V   + + + +E   GG L   + 
Sbjct: 369 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI-GVCQAEALMLVMEMAGGGPLHKFLV 427

Query: 61  EACVKLSEETCKCIVYQIAMALQYL 85
               ++       +++Q++M ++YL
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYL 452

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLS 67
            +  R+ F +E   +    HPNI+ L   V       +  EY++ G L + +     + +
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149

Query: 68  EETCKCIVYQIAMALQYLHS 87
                 ++  +   ++YL  
Sbjct: 150 IMQLVGMLRGVGAGMRYLSD 169

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEE 69
              + F      +  LSH ++V  Y   +  D   +  E+V+ G L + + +    ++  
Sbjct: 54  NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL 113

Query: 70  TCKCIVYQIAMALQYL 85
               +  Q+A A+ +L
Sbjct: 114 WKLEVAKQLAAAMHFL 129

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K  +     +N++ F +E   +K+L HP+IV L   ++ ++  ++ +E    G+L   + 
Sbjct: 46  KTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLE 104

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
                L   T      QI  A+ YL S
Sbjct: 105 RNKNSLKVLTLVLYSLQICKAMAYLES 131

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEAC-VKLS 67
           E+ + F  E++ LKSL H NIV          + N+ + +EY+  G L+  ++    ++ 
Sbjct: 53  EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 112

Query: 68  EETCKCIVYQIAMALQYLHS 87
                    QI   ++YL +
Sbjct: 113 HIKLLQYTSQICKGMEYLGT 132

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 17/103 (16%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--- 58
           K +++      RK F  E + L +L H +IV  Y      D + M  EY++ GDL     
Sbjct: 51  KALKDPTLAA-RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLR 109

Query: 59  -------------KIEACVKLSEETCKCIVYQIAMALQYLHSL 88
                          +A  +L       I  QIA  + YL S 
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ 152

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS- 67
                   + ++  +   S  N V   +    K  +Y+ ++  +  +LK  +     L  
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160

Query: 68  --EETCKCIVYQIAMALQYLHS 87
                C  I  QIA A+++LHS
Sbjct: 161 REHGVCLHIFIQIAEAVEFLHS 182

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 2/103 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++    +  R+    EV  L  L HP IV  + +  W +      +           
Sbjct: 36  IKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA--WLETPPEKWQEEMDEIWLKDE 93

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKV 103
                LS  +           +    +  +V Q +P      +
Sbjct: 94  STDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYL 136

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           KE++ A   +  K   +E   + S+ +P++  L   +     + +  + +  G L   + 
Sbjct: 50  KELREATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVR 108

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
           E    +  +       QIA  + YL  
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLED 135

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 11  ENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKI-EACVKLS 67
           + ++ F  E+  LK+L    IV          + ++ + +EY+  G L+  +     +L 
Sbjct: 66  DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 125

Query: 68  EETCKCIVYQIAMALQYLHS 87
                    QI   ++YL S
Sbjct: 126 ASRLLLYSSQICKGMEYLGS 145

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 19  EVDNLKSLS-HPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
           E+  L++L   PNI+TL + V         +  E+V   D K   +    L++   +  +
Sbjct: 80  EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYM 136

Query: 76  YQIAMALQYLHS 87
           Y+I  AL Y HS
Sbjct: 137 YEILKALDYCHS 148

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 49.4 bits (118), Expect = 4e-08
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK----LSEETCKC 73
            E   L  +    IV+L  +   K ++ + +  + GGD++  I    +      E     
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293

Query: 74  IVYQIAMALQYLHSL 88
              QI   L++LH  
Sbjct: 294 YTAQIVSGLEHLHQR 308

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.1 bits (117), Expect = 5e-08
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKL 66
              + + F  E   +K L H  +V LY  V  ++ IY+  EY+  G L    K E    L
Sbjct: 302 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYL 360

Query: 67  SEETCKCIVYQIAMALQYLHS 87
                  +  QIA  + Y+  
Sbjct: 361 RLPQLVDMAAQIASGMAYVER 381

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 48.8 bits (117), Expect = 6e-08
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K ++   +K + +    E   +  L +P IV L   V   + + + +E   GG L   + 
Sbjct: 43  KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI-GVCQAEALMLVMEMAGGGPLHKFLV 101

Query: 61  EACVKLSEETCKCIVYQIAMALQYL 85
               ++       +++Q++M ++YL
Sbjct: 102 GKREEIPVSNVAELLHQVSMGMKYL 126

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 48.9 bits (117), Expect = 6e-08
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 19  EVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  LK + H N++ L        S+   +++Y+    + G DL + I  C KL+++  +
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135

Query: 73  CIVYQIAMALQYLHS 87
            ++YQI   L+Y+HS
Sbjct: 136 FLIYQILRGLKYIHS 150

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 48.9 bits (117), Expect = 6e-08
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 19  EVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  LK + H N++ L       E++    + Y+ + ++ G DL  K+    KL E+  +
Sbjct: 74  ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDL-GKLMKHEKLGEDRIQ 131

Query: 73  CIVYQIAMALQYLHS 87
            +VYQ+   L+Y+H+
Sbjct: 132 FLVYQMLKGLRYIHA 146

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 48.5 bits (116), Expect = 6e-08
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--- 58
           K ++    ++ R  F  E   +   SH NI+ L   +     + +  EY++ G L     
Sbjct: 79  KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 138

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHS 87
           + +   + S      ++  IA  ++YL +
Sbjct: 139 EKDG--EFSVLQLVGMLRGIAAGMKYLAN 165

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            K      D    K F  E   ++   HP+IV L   V+ ++ +++ +E    G+L+S +
Sbjct: 51  CKN--CTSDSVREK-FLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFL 106

Query: 61  -EACVKLSEETCKCIVYQIAMALQYLHS 87
                 L   +     YQ++ AL YL S
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLES 134

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 12/93 (12%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKI 60
           N+  +E  + F +E   +K  SHPN++ L       S        + L +++ GDL + +
Sbjct: 74  NSSQREIEE-FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

Query: 61  EAC------VKLSEETCKCIVYQIAMALQYLHS 87
                      +  +T    +  IA+ ++YL +
Sbjct: 133 LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN 165

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.7 bits (116), Expect = 8e-08
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC- 63
               D    K F  E   ++   HP+IV L   +  ++ +++ +E    G+L+S ++   
Sbjct: 428 NCTSDSVREK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK 485

Query: 64  VKLSEETCKCIVYQIAMALQYLHS 87
             L   +     YQ++ AL YL S
Sbjct: 486 FSLDLASLILYAYQLSTALAYLES 509

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 9/75 (12%)

Query: 19  EVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  LK + H N++ L        S+    + Y+ + ++   DL+  +    K SEE  +
Sbjct: 73  ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGL--KFSEEKIQ 129

Query: 73  CIVYQIAMALQYLHS 87
            +VYQ+   L+Y+HS
Sbjct: 130 YLVYQMLKGLKYIHS 144

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIV 75
           NE   L+ ++   +V+L  +   KD + + L  + GGDLK  I    +    E       
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292

Query: 76  YQIAMALQYLHSL 88
            +I   L+ LH  
Sbjct: 293 AEICCGLEDLHRE 305

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 19  EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
           E+  LK   H NI+T++     +S    + +Y+  E +Q  DL  ++ +   LS++  + 
Sbjct: 59  EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DL-HRVISTQMLSDDHIQY 116

Query: 74  IVYQIAMALQYLHS 87
            +YQ   A++ LH 
Sbjct: 117 FIYQTLRAVKVLHG 130

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKL 66
              + + F  E   +K L H  +V LY  V  ++ IY+  EY+  G L    K E    L
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYL 277

Query: 67  SEETCKCIVYQIAMALQYLHS 87
                  +  QIA  + Y+  
Sbjct: 278 RLPQLVDMAAQIASGMAYVER 298

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 27/111 (24%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           +KE  NA   E  +   +E + LK ++HP+++ LY +      + + +EY + G L+   
Sbjct: 61  LKE--NASPSE-LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

Query: 59  ----------------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                        L+        +QI+  +QYL  
Sbjct: 118 RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKI 60
           K +    D      F  E   +K  SHPN+++L    L  +    + L Y++ GDL++ I
Sbjct: 59  KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

Query: 61  EAC-VKLSEETCKCIVYQIAMALQYLHS 87
                  + +       Q+A  ++YL S
Sbjct: 119 RNETHNPTVKDLIGFGLQVAKGMKYLAS 146

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKL 66
              + + F  E + +K+L H  +V L+  V  K+ IY+  E++  G L    K +   K 
Sbjct: 223 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQ 281

Query: 67  SEETCKCIVYQIAMALQYLHS 87
                     QIA  + ++  
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQ 302

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           KE++ A   +  K   +E   + S+ +P++  L   +     + +  + +  G L   + 
Sbjct: 50  KELREATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVR 108

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
           E    +  +       QIA  + YL  
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLED 135

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 8   LDKENRKYFANEVD--NLKSLSHPNIVTLYESVLWKDNIYMFL----EYVQGGDLKSKIE 61
              ++++ + NE +  +L  + H NI+    +     ++ + L     + + G L   ++
Sbjct: 55  FPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK 114

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ--HKPRYI 99
           A V +S      I   +A  L YLH  +   +  HKP   
Sbjct: 115 ANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKI 60
           K +    D      F  E   +K  SHPN+++L    L  +    + L Y++ GDL++ I
Sbjct: 123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

Query: 61  EAC-VKLSEETCKCIVYQIAMALQYLHS 87
                  + +       Q+A  +++L S
Sbjct: 183 RNETHNPTVKDLIGFGLQVAKGMKFLAS 210

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 9/75 (12%)

Query: 19  EVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  +K ++H NI+ L       +S+    ++Y+ +E +   +L   I+   +L  E   
Sbjct: 74  ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMS 130

Query: 73  CIVYQIAMALQYLHS 87
            ++YQ+   +++LHS
Sbjct: 131 YLLYQMLCGIKHLHS 145

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 17/98 (17%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS------- 58
            A     R+ F +E      L HPN+V L   V     + M   Y   GDL         
Sbjct: 50  KAEGPL-REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 108

Query: 59  ---------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                           L       +V QIA  ++YL S
Sbjct: 109 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 146

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 20/104 (19%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K+  +A +K+      +E++ +K +  H NI+ L  +      +Y+ +EY   G+L+  
Sbjct: 121 LKD--DATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 177

Query: 59  ---------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                +++ +      YQ+A  ++YL S
Sbjct: 178 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 19  EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCK 72
           E+  L    HPNI+ L              +Y+  E +   DL   I    + +S +  +
Sbjct: 79  EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137

Query: 73  CIVYQIAMALQYLHS 87
             +Y I + L  LH 
Sbjct: 138 YFMYHILLGLHVLHE 152

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-- 58
           +KE  + ++ E    F  E   +K + HPN+V L      +   Y+  E++  G+L    
Sbjct: 46  LKE--DTMEVEE---FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHS 87
           +     ++S      +  QI+ A++YL  
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEK 129

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 23  LKSLSHPNIVTLYESVL-----WKDNIYMFL--EYVQGGDLKSKIEACVK----LSEETC 71
           L  L HPNIV L           + +IY+ +  EYV    L        +          
Sbjct: 73  LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILI 131

Query: 72  KCIVYQIAMALQYLHS 87
           K  ++Q+  ++  LH 
Sbjct: 132 KVFLFQLIRSIGCLHL 147

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 19  EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
           E+  L    H NI+ +       ++    ++Y+  + +   DL  K+     LS +    
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDL-YKLLKTQHLSNDHICY 132

Query: 74  IVYQIAMALQYLHS 87
            +YQI   L+Y+HS
Sbjct: 133 FLYQILRGLKYIHS 146

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI-YMFLEYVQGGDLKSK 59
           +  +      E    F  E   ++ L+HPN++ L   +L  + + ++ L Y+  GDL   
Sbjct: 57  LSRITEMQQVEA---FLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113

Query: 60  IEAC-VKLSEETCKCIVYQIAMALQYLHS 87
           I +     + +       Q+A  ++YL  
Sbjct: 114 IRSPQRNPTVKDLISFGLQVARGMEYLAE 142

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 45.7 bits (109), Expect = 6e-07
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
           F  E + +K L H  +V LY  V  ++ IY+  EY++ G L    K  + +KL+      
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113

Query: 74  IVYQIAMALQYLHS 87
           +  QIA  + ++  
Sbjct: 114 MAAQIAEGMAFIEE 127

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.7 bits (109), Expect = 6e-07
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCI 74
           F  E + +  LSHP +V LY   L +  I +  E+++ G L   +       + ET   +
Sbjct: 50  FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM 109

Query: 75  VYQIAMALQYL 85
              +   + YL
Sbjct: 110 CLDVCEGMAYL 120

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 45.7 bits (109), Expect = 6e-07
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 20/104 (19%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K+  +A +K+      +E++ +K +  H NI+ L  +      +Y+ +EY   G+L+  
Sbjct: 75  LKD--DATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131

Query: 59  ---------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                +++ +      YQ+A  ++YL S
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 45.7 bits (109), Expect = 7e-07
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)

Query: 19  EVDNLKSLSHPNIVTLYE--------------SVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           E+  ++ L H NIV ++E              S+   +++Y+  EY++  DL + +E   
Sbjct: 58  EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-G 115

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
            L EE  +  +YQ+   L+Y+HS
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHS 138

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 45.7 bits (109), Expect = 7e-07
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCI 74
           F  E   + +LSH  +V LY     +  I++  EY+  G L + +     +   +    +
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125

Query: 75  VYQIAMALQYL 85
              +  A++YL
Sbjct: 126 CKDVCEAMEYL 136

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLS 67
             E    F  EV+ + SL H N++ LY  VL    + M  E    G L  ++ +      
Sbjct: 61  QPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL 119

Query: 68  EETCKCIVYQIAMALQYLHS 87
             T      Q+A  + YL S
Sbjct: 120 LGTLSRYAVQVAEGMGYLES 139

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 45.6 bits (108), Expect = 8e-07
 Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 19  EVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
           E+  +K ++H NI++L       +++    ++Y+ +E +   +L   I+   +L  E   
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMS 167

Query: 73  CIVYQIAMALQYLHS 87
            ++YQ+   +++LHS
Sbjct: 168 YLLYQMLCGIKHLHS 182

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.4 bits (108), Expect = 9e-07
 Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI- 60
           K +++   +++ +   + +  + SL H +IV L        ++ +  +Y+  G L   + 
Sbjct: 48  KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVR 106

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
           +    L  +       QIA  + YL  
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEE 133

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 7/73 (9%)

Query: 19  EVDNLKSLS-HPNIVTLYESVLWKDN---IYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
           E+  L  LS H NIV L   VL  DN   +Y+  +Y++  DL + I A   L     + +
Sbjct: 58  EIMILTELSGHENIVNLLN-VLRADNDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYV 114

Query: 75  VYQIAMALQYLHS 87
           VYQ+   ++YLHS
Sbjct: 115 VYQLIKVIKYLHS 127

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 20/104 (19%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           MKE   A   ++R  FA E++ L  L  HPNI+ L  +   +  +Y+ +EY   G+L   
Sbjct: 60  MKE--YASKDDHRD-FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116

Query: 59  ---------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                 LS +        +A  + YL  
Sbjct: 117 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 27/111 (24%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +KE   A   E R+   +E+  +  L SH NIV L  +      IY+  EY   GDL + 
Sbjct: 83  LKE--KADSSE-REALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY 139

Query: 59  ----------------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                 + E    L+ E   C  YQ+A  +++L  
Sbjct: 140 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEETCKCI 74
           F  E   +  LSHP +V  Y     +  IY+  EY+  G L + +      L       +
Sbjct: 50  FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109

Query: 75  VYQIAMALQYLHS 87
            Y +   + +L S
Sbjct: 110 CYDVCEGMAFLES 122

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 22/106 (20%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K   +A   E R+   +E+  L  L +H NIV L  +        +  EY   GDL + 
Sbjct: 61  LKP--SAHLTE-REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNF 117

Query: 59  -----------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                              +  + L  E      YQ+A  + +L S
Sbjct: 118 LRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 163

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKS--KIEACVKLSEETCK 72
           F  E   +  L H N+V L   ++  K  +Y+  EY+  G L    +      L  +   
Sbjct: 61  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120

Query: 73  CIVYQIAMALQYLHS 87
                +  A++YL  
Sbjct: 121 KFSLDVCEAMEYLEG 135

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 20/104 (19%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K   +A +K+      +E++ +K +  H NI+ L  +      +Y+ +EY   G+L+  
Sbjct: 109 LKS--DATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165

Query: 59  ---------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                                +LS +      YQ+A  ++YL S
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 16  FANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKS--KIEACVKLSEETCK 72
           F  E   +  L H N+V L   ++  K  +Y+  EY+  G L    +      L  +   
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292

Query: 73  CIVYQIAMALQYLHS 87
                +  A++YL  
Sbjct: 293 KFSLDVCEAMEYLEG 307

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKS 58
           +KE   A   E  +   +E+  L  +  H N+V L  +       + + +E+ + G+L +
Sbjct: 65  LKE--GATHSE-HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 121

Query: 59  ----------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                           +      L+ E   C  +Q+A  +++L S
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 18/102 (17%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K    A   E ++   +E+  +  L  H NIV L  +      + +  EY   GDL + 
Sbjct: 84  LKS--TAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140

Query: 59  -------------KIEACVKLSEETCKCIVYQIAMALQYLHS 87
                           A    S         Q+A  + +L S
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 43.1 bits (101), Expect = 6e-06
 Identities = 13/95 (13%), Positives = 28/95 (29%), Gaps = 8/95 (8%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE--SVLWKDNIYMFLEYVQG----- 53
           ++ ++N    +    F    D +K      ++ +      +W  + +     +Q      
Sbjct: 135 LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTF 194

Query: 54  -GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
              L S       L       +  Q+   L  LH 
Sbjct: 195 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH 229

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 43.1 bits (101), Expect = 6e-06
 Identities = 11/92 (11%), Positives = 23/92 (25%), Gaps = 10/92 (10%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLY--ESVLWKDNIYMFLEYVQGGDLKSKIEA 62
           ++  +  +R+      D +   S P    L   +      N  + +      DL+     
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV-DLELLFST 180

Query: 63  CVK-------LSEETCKCIVYQIAMALQYLHS 87
                             +  Q+      L S
Sbjct: 181 LDFVYVFRGDEGILALHILTAQLIRLAANLQS 212

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 43/112 (38%)

Query: 19  EVDNLKSLSHPNIVTLYESVLWKDN----------------------------------- 43
           E+D +K L H NI+ L +      +                                   
Sbjct: 50  ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQ 109

Query: 44  ---IYMFLEYVQGGDLKSKIEACVK----LSEETCKCIVYQIAMALQYLHSL 88
              + + +EYV    L   +++ ++    +        +YQ+  A+ ++HSL
Sbjct: 110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.98
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.98
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.95
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.94
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.94
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.94
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.93
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.93
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.93
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.93
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.93
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.93
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.93
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.93
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.92
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.92
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.92
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.92
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.92
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.92
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.92
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.92
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.92
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.91
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.91
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.91
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.91
3niz_A	311	Rhodanese family protein; structural genomics, str	99.91
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.91
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.91
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.91
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.91
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.91
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.91
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.91
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.91
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.91
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.91
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.91
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.91
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.91
3bhy_A	283	Death-associated protein kinase 3; death associate	99.91
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.91
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.9
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.9
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.9
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.9
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.9
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.9
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.9
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.9
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.9
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.9
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.9
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.9
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.9
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.9
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.9
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.89
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.89
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.89
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.89
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.89
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.89
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.89
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.89
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.89
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.89
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.89
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.89
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.89
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.89
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.89
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.89
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.89
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.89
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.89
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.89
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.89
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.89
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.89
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.88
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.88
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.88
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.88
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.88
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.88
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.88
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.88
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.88
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.88
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.88
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.87
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.87
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.87
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.87
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.87
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.87
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.87
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.87
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.87
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.87
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.87
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.87
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.86
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.86
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.86
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.86
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.86
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.85
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.85
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.85
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.85
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.84
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.84
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.84
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.83
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.83
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.83
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.82
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.81
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.76
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.69
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.6
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.32
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.12
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.91
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.89
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.56
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.39
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.27
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.23
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.49
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.47
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.2
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.86
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.78
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.61
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.68
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.02
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	92.71
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	90.12
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	89.68
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	89.25
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.83
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	88.04
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	87.9
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	87.24
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	87.15
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.7
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	86.12
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.5

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.3e-35  Score=199.10  Aligned_cols=120  Identities=22%  Similarity=0.276  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+++|+.++||||+++++++.+++..|+||||++||+|.+++...+.+++..++.++.|++.||.|||++|
T Consensus        73 ~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A           73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567799999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec------cccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN------RQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~------~~~~~~~~gtp~  129 (131)
                      ++| ||||+|||++.++.+||+|||++..      .....+.+|||+
T Consensus       153 IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~  199 (311)
T 4aw0_A          153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ  199 (311)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGG
T ss_pred             CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcc
Confidence            999 9999999999999999999998852      223456788885

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.1e-34  Score=198.15  Aligned_cols=129  Identities=24%  Similarity=0.365  Sum_probs=111.8

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~   77 (131)
                      ||++.+. .+....+.+.+|+.+|+.++|||||++++++.+++..|+||||++||+|.+++...+  .+++..++.++.|
T Consensus        54 iK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~q  133 (350)
T 4b9d_A           54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ  133 (350)
T ss_dssp             EEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHH
Confidence            4556533 356677889999999999999999999999999999999999999999999997543  4788999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeecc----ccccCCCCCCC
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENR----QVRSGNVNGPF  129 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~----~~~~~~~gtp~  129 (131)
                      ++.||.|+|++|++| ||||+|||++.++.+||+|||++...    ....+.+|||+
T Consensus       134 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~  190 (350)
T 4b9d_A          134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY  190 (350)
T ss_dssp             HHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCT
T ss_pred             HHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCcc
Confidence            999999999999999 99999999999999999999998522    23344567774

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.5e-33  Score=190.69  Aligned_cols=128  Identities=27%  Similarity=0.328  Sum_probs=110.3

Q ss_pred             ccccc-cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           2 KEVQN-ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~-~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      |++.. ..+....+.+.+|+.+++.++|||||++++++.+    +...|+||||+++|+|.+++...+.+++..+..++.
T Consensus        57 K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~  136 (290)
T 3fpq_A           57 CELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCR  136 (290)
T ss_dssp             EEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHH
T ss_pred             EEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHH
Confidence            44442 3356677889999999999999999999999875    345899999999999999999888899999999999


Q ss_pred             HHHHHHHHHHhcc--ccc-cccccceEEec-CCeeeccceeeee--ccccccCCCCCCC
Q psy2929          77 QIAMALQYLHSLM--SVN-QHKPRYIAWKV-GSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        77 ~~~~~l~~lh~~~--~~h-dlk~~nili~~-~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      |++.||.|+|+++  ++| ||||+|||++. ++.+||+|||++.  ......+.+|||.
T Consensus       137 qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~  195 (290)
T 3fpq_A          137 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE  195 (290)
T ss_dssp             HHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCC
T ss_pred             HHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCcc
Confidence            9999999999998  999 99999999975 7899999999985  3344456678885

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-33  Score=196.28  Aligned_cols=117  Identities=23%  Similarity=0.395  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+|+.++|||||++++++.+++..|+||||+++|+|.+++.. +.+++..++.++.|++.||.|||++|++
T Consensus       114 ~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~Ii  192 (346)
T 4fih_A          114 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVI  192 (346)
T ss_dssp             SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            345688999999999999999999999999999999999999999999876 4799999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      | ||||+|||++.+|.+||+|||++.    ......+.+|||+
T Consensus       193 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~  235 (346)
T 4fih_A          193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  235 (346)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGG
T ss_pred             cccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcC
Confidence            9 999999999999999999999875    2334566788885

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.6e-34  Score=195.87  Aligned_cols=118  Identities=25%  Similarity=0.310  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|+.+++.++||||+++++++.+++..|+||||++||+|.+++...+.+++..+..++.|++.||.|+|++|++
T Consensus        69 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii  148 (304)
T 3ubd_A           69 DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII  148 (304)
T ss_dssp             ECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            34468889999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeeec----cccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp~  129 (131)
                      | ||||+|||++.+|.+|++|||++..    .....+.+|||.
T Consensus       149 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~  191 (304)
T 3ubd_A          149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE  191 (304)
T ss_dssp             CSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGG
T ss_pred             CCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcc
Confidence            9 9999999999999999999999852    334456778874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.7e-33  Score=188.09  Aligned_cols=128  Identities=23%  Similarity=0.350  Sum_probs=103.3

Q ss_pred             Cccccccc--cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNAL--DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||++.+..  +....+.+.+|+.+++.++||||+++++++.+++..|+||||+ +|+|.+++...+.+++..+..++.|+
T Consensus        43 iK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi  121 (275)
T 3hyh_A           43 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI  121 (275)
T ss_dssp             EEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHH
T ss_pred             EEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHH
Confidence            35554322  3345667999999999999999999999999999999999999 67999999988899999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +.||.|+|++|++| ||||+|||++.++.+|++|||++.   ......+.+|||.
T Consensus       122 ~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~  176 (275)
T 3hyh_A          122 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN  176 (275)
T ss_dssp             HHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CT
T ss_pred             HHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcc
Confidence            99999999999999 999999999999999999999985   3334455678875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.7e-33  Score=197.79  Aligned_cols=117  Identities=23%  Similarity=0.395  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+|+.++|||||++++++.+++..|+||||++||+|.+++.. +.+++..+..++.|++.||.|||++|++
T Consensus       191 ~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~Ii  269 (423)
T 4fie_A          191 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVI  269 (423)
T ss_dssp             SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            345688999999999999999999999999999999999999999999875 4799999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      | ||||+|||++.+|.+||+|||++.    ......+.+|||+
T Consensus       270 HRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~  312 (423)
T 4fie_A          270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  312 (423)
T ss_dssp             CCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTT
T ss_pred             cccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcC
Confidence            9 999999999999999999999875    2334556778885

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.98  E-value=5.9e-32  Score=185.20  Aligned_cols=128  Identities=21%  Similarity=0.241  Sum_probs=106.2

Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHH
Q psy2929           1 MKEVQN-ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~-~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~   78 (131)
                      ||+++. ..+.+..+.+.+|+.+++.++|||||++++++. ++..|+||||+++|+|.+++... ..+++.....++.|+
T Consensus        63 vK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qi  141 (307)
T 3omv_A           63 VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT  141 (307)
T ss_dssp             EEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHH
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHH
Confidence            355542 235667788999999999999999999999874 56689999999999999999764 469999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeeecc------ccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENR------QVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~------~~~~~~~gtp~  129 (131)
                      +.||.|||+++++| ||||+|||++.++.+||+|||++...      ......+|||.
T Consensus       142 a~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~  199 (307)
T 3omv_A          142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL  199 (307)
T ss_dssp             HHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTT
T ss_pred             HHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCC
Confidence            99999999999999 99999999999999999999997522      22344567763

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.98  E-value=7.4e-32  Score=184.34  Aligned_cols=116  Identities=24%  Similarity=0.395  Sum_probs=100.9

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------------eeEEeeeccCCCChHHHHHhccC---
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------------NIYMFLEYVQGGDLKSKIEACVK---   65 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------------~~~lv~e~~~~~~l~~~~~~~~~---   65 (131)
                      ||++.....+...+.+.+|+.+|+.++|||||++++++.+.+            ..|++|||+++|+|.+++.....   
T Consensus        35 iK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~  114 (299)
T 4g31_A           35 IKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE  114 (299)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGG
T ss_pred             EEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCCh
Confidence            466654456667788999999999999999999999997654            36999999999999999987653   


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          66 LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .....++.++.|++.||.|+|++|++| ||||+|||++.++.+||+|||++.
T Consensus       115 ~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~  166 (299)
T 4g31_A          115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT  166 (299)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccce
Confidence            445668889999999999999999999 999999999999999999999874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=3.4e-31  Score=183.11  Aligned_cols=114  Identities=22%  Similarity=0.299  Sum_probs=101.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---------------cCC
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---------------VKL   66 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---------------~~~   66 (131)
                      |+++ ..+....+.+.+|+++|+.++|||||++++++.+.+..|+||||+++|+|.+++...               +++
T Consensus        77 K~l~-~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l  155 (329)
T 4aoj_A           77 KALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL  155 (329)
T ss_dssp             EEES-CCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSC
T ss_pred             EEEC-cCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCC
Confidence            4443 235566788999999999999999999999999999999999999999999999753               247


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          67 SEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.....++.|++.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       156 ~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~  206 (329)
T 4aoj_A          156 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR  206 (329)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccce
Confidence            88999999999999999999999999 999999999999999999999875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=2e-31  Score=182.12  Aligned_cols=114  Identities=26%  Similarity=0.338  Sum_probs=103.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------------CCCH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------------KLSE   68 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------------~~~~   68 (131)
                      |+++ ..+....+.+.+|+++|+.++|||||++++++.+++..|+||||+++|+|.+++...+             .+++
T Consensus        49 K~l~-~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~  127 (299)
T 4asz_A           49 KTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ  127 (299)
T ss_dssp             EEEC-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCH
T ss_pred             EEeC-CCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCH
Confidence            4443 2345667789999999999999999999999999999999999999999999997642             5899


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          69 ETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .....++.|++.||.|||+++++| ||||+|||++.++.+||+|||++.
T Consensus       128 ~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~  176 (299)
T 4asz_A          128 SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR  176 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccce
Confidence            999999999999999999999999 999999999999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=1.9e-31  Score=184.48  Aligned_cols=100  Identities=24%  Similarity=0.256  Sum_probs=95.9

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-ccc
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHK   95 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk   95 (131)
                      .+|+.+++.++|||||++++++.+++..|+||||++||+|.+++...+.+++..+..++.|++.||.|+|+++++| |||
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlK  177 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK  177 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCC
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccC
Confidence            4699999999999999999999999999999999999999999998889999999999999999999999999999 999


Q ss_pred             ccceEEecCC-eeeccceeeee
Q psy2929          96 PRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        96 ~~nili~~~~-~~kl~df~~~~  116 (131)
                      |+|||++.+| .+||+|||++.
T Consensus       178 p~NILl~~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          178 ADNVLLSSDGSRAALCDFGHAL  199 (336)
T ss_dssp             GGGEEECTTSCCEEECCCTTCE
T ss_pred             HHHEEEeCCCCEEEEeeCCCCe
Confidence            9999999987 59999999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=1.8e-31  Score=183.05  Aligned_cols=116  Identities=23%  Similarity=0.258  Sum_probs=103.0

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------------c
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------V   64 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------------~   64 (131)
                      ||+++...+....+.+.+|+.+++.++|||||++++++.+++..++||||+++|+|.+++...                .
T Consensus        61 vK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~  140 (308)
T 4gt4_A           61 IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS  140 (308)
T ss_dssp             EEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEEC
T ss_pred             EEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCcccccccccccccccc
Confidence            355554445556678999999999999999999999999999999999999999999999643                2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++.....++.|++.||.|||+++++| ||||+|||++.++.+||+|||++.
T Consensus       141 ~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar  193 (308)
T 4gt4_A          141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR  193 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccce
Confidence            4788999999999999999999999999 999999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=9.6e-30  Score=188.20  Aligned_cols=113  Identities=18%  Similarity=0.184  Sum_probs=102.6

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-ccc
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHK   95 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk   95 (131)
                      ++++.+++.++||||++++++|.+++..|+||||++||+|.+++...+.+++..++.++.|++.||.|||++||+| |||
T Consensus       240 ~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLK  319 (689)
T 3v5w_A          240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK  319 (689)
T ss_dssp             HHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred             HHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            3446677788999999999999999999999999999999999999889999999999999999999999999999 999


Q ss_pred             ccceEEecCCeeeccceeeee--ccccccCCCCCCC
Q psy2929          96 PRYIAWKVGSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        96 ~~nili~~~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      |+|||++.+|.+||+|||++.  ......+.+|||.
T Consensus       320 PeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~  355 (689)
T 3v5w_A          320 PANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  355 (689)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGG
T ss_pred             hHHeEEeCCCCEEecccceeeecCCCCCCCccCCcC
Confidence            999999999999999999985  3344566788885

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=8.8e-30  Score=179.89  Aligned_cols=128  Identities=23%  Similarity=0.336  Sum_probs=109.0

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhccCCCHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKC   73 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~   73 (131)
                      ||++.+. ......+.+.+|+.+|+.++||||+++++++...      +..|+||||++ |+|.+++...+.+++..+..
T Consensus        84 iK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~  162 (398)
T 4b99_A           84 IKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRY  162 (398)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHH
T ss_pred             EEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHH
Confidence            4555533 2455667889999999999999999999998643      56899999996 58999998888999999999


Q ss_pred             HHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeec--------cccccCCCCCCC
Q psy2929          74 IVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN--------RQVRSGNVNGPF  129 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~--------~~~~~~~~gtp~  129 (131)
                      ++.|++.||.|||++|++| ||||+|||++.++.+|++|||++..        .....+.+|||+
T Consensus       163 ~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~  227 (398)
T 4b99_A          163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW  227 (398)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCT
T ss_pred             HHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChH
Confidence            9999999999999999999 9999999999999999999998742        223456788885

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=6.6e-29  Score=173.01  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=100.4

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCC-CCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      |.+.........+.+.+|+.+|+.++| ||||++++++..+ +..|+||||+++|+|.+++....               
T Consensus       100 K~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~  179 (353)
T 4ase_A          100 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK  179 (353)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CT
T ss_pred             EEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhcc
Confidence            444444455667789999999999965 9999999998765 46899999999999999997532               


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+++..+..++.|++.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       180 ~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar  233 (353)
T 4ase_A          180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR  233 (353)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred             ccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhh
Confidence             3688899999999999999999999999 999999999999999999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=1.1e-28  Score=181.07  Aligned_cols=106  Identities=13%  Similarity=0.052  Sum_probs=97.9

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .+...+.+.+|+++|+++ .|+||+++++++.+++..||||||++|++|.+++...++++..   .++.|++.||.|+|+
T Consensus       281 ~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~  357 (569)
T 4azs_A          281 SQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEK  357 (569)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHH
Confidence            455677899999999999 5999999999999999999999999999999999988788765   478999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      +||+| ||||+|||++.+|.+||+|||++..
T Consensus       358 ~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~  388 (569)
T 4azs_A          358 QGFWHDDVRPWNVMVDARQHARLIDFGSIVT  388 (569)
T ss_dssp             TTCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred             CCceeccCchHhEEECCCCCEEEeecccCee
Confidence            99999 9999999999999999999998753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=1.1e-28  Score=181.16  Aligned_cols=121  Identities=20%  Similarity=0.281  Sum_probs=106.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+|+.++||||+++++++.+++..|++|||++||+|.+++.. .+.+++..+..++.|++.||.|||+
T Consensus       194 ~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~  273 (573)
T 3uto_A          194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE  273 (573)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345567899999999999999999999999999999999999999999999864 4579999999999999999999999


Q ss_pred             ccccc-cccccceEEecC--Ceeeccceeeee---ccccccCCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVG--SILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~--~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      ++++| ||||+|||++.+  +.+||+|||++.   ........+|||+
T Consensus       274 ~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~  321 (573)
T 3uto_A          274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE  321 (573)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGG
T ss_pred             CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECcc
Confidence            99999 999999999864  889999999885   3333445567764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.95  E-value=2.3e-28  Score=170.83  Aligned_cols=102  Identities=15%  Similarity=0.176  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...++.+|+++|+.+ +||||+++++++.+++..|+||||+++|+|.+++.   .+++..++.++.|++.||.|+|++|+
T Consensus        62 ~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gI  138 (361)
T 4f9c_A           62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGI  138 (361)
T ss_dssp             CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345688999999988 69999999999999999999999999999999884   48999999999999999999999999


Q ss_pred             cc-cccccceEEecC-Ceeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.+ +.+|++|||++.
T Consensus       139 iHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A          139 VHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99 999999999877 899999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=3.5e-28  Score=166.42  Aligned_cols=99  Identities=17%  Similarity=0.165  Sum_probs=89.1

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc----
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL----   88 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~----   88 (131)
                      +.|+..+..++||||+++++++..++    ..|+||||+++|+|.+++... +++++....++.|++.||.|+|++    
T Consensus        45 e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~  123 (303)
T 3hmm_A           45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            45666667889999999999998764    579999999999999999865 688899999999999999999987    


Q ss_pred             ----cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 ----MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ----~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                          +++| ||||+|||++.++.+||+|||++.
T Consensus       124 ~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A          124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence                9999 999999999999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.95  E-value=2.9e-27  Score=163.30  Aligned_cols=127  Identities=24%  Similarity=0.357  Sum_probs=110.7

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      |++.+. .+....+.+.+|+.+++.++||||+++++.+...+..|+||||+++++|.+++...+.+++..+..++.|++.
T Consensus        46 K~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~  125 (328)
T 3fe3_A           46 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS  125 (328)
T ss_dssp             EEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             EEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            444432 3556677899999999999999999999999999999999999999999999988888999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeeec---cccccCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN---RQVRSGNVNGP  128 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~---~~~~~~~~gtp  128 (131)
                      |+.|+|++|++| ||||+|||++.++.+|++|||++..   .......+|||
T Consensus       126 al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  177 (328)
T 3fe3_A          126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP  177 (328)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSG
T ss_pred             HHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCc
Confidence            999999999999 9999999999999999999998742   23334455655

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.94  E-value=3.9e-26  Score=158.65  Aligned_cols=120  Identities=23%  Similarity=0.323  Sum_probs=106.9

Q ss_pred             cHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|..+++.+ +||||+++++++.+.+..|+||||+++|+|.+++...+.+++..++.++.|++.||.|||+
T Consensus        49 ~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~  128 (345)
T 3a8x_A           49 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE  128 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            455667788999999988 8999999999999999999999999999999999987789999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      +|++| ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       129 ~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~  174 (345)
T 3a8x_A          129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  174 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCG
T ss_pred             CCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCc
Confidence            99999 9999999999999999999998753    22334455665

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=1.6e-26  Score=160.23  Aligned_cols=105  Identities=21%  Similarity=0.234  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|..+++.++||||+++++++.+.+..|++|||+++|+|.+++...+.+++..+..++.|++.||.|||++|++
T Consensus        48 ~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  127 (337)
T 1o6l_A           48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV  127 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45678899999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.++.+|++|||++.
T Consensus       128 HrDlkp~NIll~~~g~vkL~DFG~a~  153 (337)
T 1o6l_A          128 YRDIKLENLMLDKDGHIKITDFGLCK  153 (337)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             cCcCCHHHEEECCCCCEEEeeccchh
Confidence            9 999999999999999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.94  E-value=2.8e-26  Score=157.79  Aligned_cols=117  Identities=21%  Similarity=0.337  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|..+++.++||||+++++++.+....|++|||+++|+|.+++.....+++.....++.|++.||.|+|++|++
T Consensus        49 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  128 (318)
T 1fot_A           49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDII  128 (318)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45678899999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeeecc-ccccCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIENR-QVRSGNVNGP  128 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~~~-~~~~~~~gtp  128 (131)
                      | ||||+|||++.++.+|++|||++... ......+|||
T Consensus       129 HrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~  167 (318)
T 1fot_A          129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP  167 (318)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCT
T ss_pred             ccCCChheEEEcCCCCEEEeecCcceecCCccccccCCc
Confidence            9 99999999999999999999987532 2233455665

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=2.5e-26  Score=160.12  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|..+++.+ +||||+++++++.+.+..|+||||+++|+|.+++...+.+++..++.++.|++.||.|||++
T Consensus        64 ~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~  143 (353)
T 3txo_A           64 DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK  143 (353)
T ss_dssp             HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556788999999988 69999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      |++| ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       144 givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~  188 (353)
T 3txo_A          144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTP  188 (353)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCG
T ss_pred             CCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCc
Confidence            9999 9999999999999999999998753    22334455665

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=2e-26  Score=162.15  Aligned_cols=117  Identities=21%  Similarity=0.357  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..|+|+||+.+|+|..++.....+++..+..++.|++.||.|||++|++
T Consensus        58 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~giv  137 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRII  137 (384)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            45678899999999999999999999999999999999999999999999887899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      | ||||+|||++.++.+|++|||++.   ........+|||
T Consensus       138 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~  178 (384)
T 4fr4_A          138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK  178 (384)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCG
T ss_pred             eccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCc
Confidence            9 999999999999999999999875   233334455554

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=7.8e-26  Score=153.76  Aligned_cols=108  Identities=29%  Similarity=0.332  Sum_probs=102.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++...+.+++..+..++.|++.|+.|+|++
T Consensus        51 ~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  130 (294)
T 4eqm_A           51 KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM  130 (294)
T ss_dssp             CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45567789999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||||+||+++.++.+|++|||++.
T Consensus       131 ~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A          131 RIVHRDIKPQNILIDSNKTLKIFDFGIAK  159 (294)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred             CcccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence            9999 999999999999999999999774

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.94  E-value=9.9e-26  Score=157.45  Aligned_cols=120  Identities=23%  Similarity=0.279  Sum_probs=105.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++++.+.+..|+++||+++++|.+.+.....+++..+..++.|++.||.|||++
T Consensus        68 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~  147 (362)
T 2bdw_A           68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN  147 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45667789999999999999999999999999999999999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCC---eeeccceeeeecc---ccccCCCCCC
Q psy2929          89 MSVN-QHKPRYIAWKVGS---ILAGGKLYFIENR---QVRSGNVNGP  128 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~---~~kl~df~~~~~~---~~~~~~~gtp  128 (131)
                      |++| ||||+|||++.++   .+|++|||++...   .......|||
T Consensus       148 ~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~  194 (362)
T 2bdw_A          148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP  194 (362)
T ss_dssp             TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCT
T ss_pred             CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCc
Confidence            9999 9999999998654   5999999987532   2223345655

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=8.1e-26  Score=161.68  Aligned_cols=108  Identities=24%  Similarity=0.304  Sum_probs=101.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      +....+.+.+|+.+++.++||||+++++.+.+++..|++|||+++|+|.+.+...+.+++..+..++.|++.|+.|+|++
T Consensus        50 ~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~  129 (444)
T 3soa_A           50 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM  129 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45567789999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cccc-cccccceEEe---cCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWK---VGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~---~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++   .++.+|++|||++.
T Consensus       130 givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A          130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            9999 9999999998   45789999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.94  E-value=2.8e-26  Score=162.00  Aligned_cols=119  Identities=22%  Similarity=0.312  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|..+++.+ +||||+++++++.+++..|+||||+++|+|..++...+.+++..+..++.|++.||.|||++
T Consensus        93 ~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~  172 (396)
T 4dc2_A           93 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER  172 (396)
T ss_dssp             ---CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            33455688899999876 89999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      |++| ||||+|||++.++.+||+|||++..    .......+|||
T Consensus       173 givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~  217 (396)
T 4dc2_A          173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  217 (396)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCG
T ss_pred             CEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCc
Confidence            9999 9999999999999999999998752    33344556665

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.93  E-value=6.2e-26  Score=158.54  Aligned_cols=117  Identities=25%  Similarity=0.291  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..|+|+||+++++|.+++...+.+++..+..++.|++.||.|||++|++
T Consensus        58 ~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  137 (361)
T 2yab_A           58 CREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            35678999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCC----eeeccceeeeecc---ccccCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGS----ILAGGKLYFIENR---QVRSGNVNGP  128 (131)
Q Consensus        92 h-dlk~~nili~~~~----~~kl~df~~~~~~---~~~~~~~gtp  128 (131)
                      | ||||+|||++.++    .+|++|||++...   ......+|||
T Consensus       138 HrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~  182 (361)
T 2yab_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP  182 (361)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCG
T ss_pred             cCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCc
Confidence            9 9999999998877    7999999987532   2234445665

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=3.8e-26  Score=158.97  Aligned_cols=105  Identities=27%  Similarity=0.373  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...+.+++..+..++.|++.||.|||++|++
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  163 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI  163 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45678899999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.++.+|++|||++.
T Consensus       164 HrDlkp~NIll~~~g~~kL~DFg~a~  189 (350)
T 1rdq_E          164 YRDLKPENLLIDQQGYIQVTDFGFAK  189 (350)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cccCccceEEECCCCCEEEcccccce
Confidence            9 999999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=1.5e-25  Score=156.95  Aligned_cols=115  Identities=17%  Similarity=0.331  Sum_probs=103.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++.+.+..|+|+||+++|+|.+++....                
T Consensus       119 K~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  198 (370)
T 2psq_A          119 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE  198 (370)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCC
T ss_pred             EEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccc
Confidence            4444444566778899999999999 89999999999999999999999999999999998643                


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++...+..++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  251 (370)
T 2psq_A          199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR  251 (370)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCE
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCc
Confidence            3688889999999999999999999999 999999999999999999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=8e-26  Score=155.84  Aligned_cols=106  Identities=25%  Similarity=0.298  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        63 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  142 (327)
T 3a62_A           63 KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI  142 (327)
T ss_dssp             --------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            34566889999999999999999999999999999999999999999999988789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       143 vH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A          143 IYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             CCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EcccCCHHHeEECCCCcEEEEeCCccc
Confidence            99 999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.93  E-value=2.3e-25  Score=152.13  Aligned_cols=109  Identities=19%  Similarity=0.349  Sum_probs=102.0

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .+....+.+.+|+.+++.++||||+++++++.+.+..++|+||+++++|.+++.. ...+++.....++.|++.||.|+|
T Consensus        46 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  125 (310)
T 3s95_A           46 FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH  125 (310)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3566778899999999999999999999999999999999999999999999987 447899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++.++.+|++|||++.
T Consensus       126 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  156 (310)
T 3s95_A          126 SMNIIHRDLNSHNCLVRENKNVVVADFGLAR  156 (310)
T ss_dssp             HTTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred             hCCccCCCCCcCeEEECCCCCEEEeecccce
Confidence            999999 999999999999999999999764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=7.6e-26  Score=157.26  Aligned_cols=117  Identities=21%  Similarity=0.306  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|..+++.+ +||||+++++++.+.+..|+||||+++|+|.+++...+.+++.....++.|++.||.|||++|+
T Consensus        60 ~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  139 (345)
T 1xjd_A           60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI  139 (345)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456678899999876 8999999999999999999999999999999999987789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      +| ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       140 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~  182 (345)
T 1xjd_A          140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTP  182 (345)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             EeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCc
Confidence            99 9999999999999999999998753    22334455665

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.2e-25  Score=154.94  Aligned_cols=115  Identities=17%  Similarity=0.253  Sum_probs=104.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      |++.........+.+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++... +.++...+..++.|++.
T Consensus        83 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~  162 (325)
T 3kul_A           83 KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA  162 (325)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence            44444446667788999999999999999999999999989999999999999999999754 47999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|++|++| ||+|+|||++.++.++++|||++.
T Consensus       163 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  199 (325)
T 3kul_A          163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR  199 (325)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             HHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence            999999999999 999999999999999999999875

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=1.2e-25  Score=156.62  Aligned_cols=118  Identities=19%  Similarity=0.213  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|..+++.+ +||+|+++++++.+.+..|+||||+++|+|.+++...+.+++..++.++.|++.||.|||++|
T Consensus        62 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  141 (353)
T 2i0e_A           62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  141 (353)
T ss_dssp             TCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456788899999988 799999999999999999999999999999999998778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      ++| ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       142 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~  185 (353)
T 2i0e_A          142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTP  185 (353)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCc
Confidence            999 9999999999999999999998753    22334456665

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.93  E-value=3.4e-26  Score=157.50  Aligned_cols=107  Identities=23%  Similarity=0.334  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++++.+.+..|++|||+++++|.+++.....+++..+..++.|++.||.|||++|
T Consensus        46 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           46 VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             -----CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33456788999999999999999999999999999999999999999999987778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.+|++|||++.
T Consensus       126 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  153 (323)
T 3tki_A          126 ITHRDIKPENLLLDERDNLKISDFGLAT  153 (323)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ccccccchHHEEEeCCCCEEEEEeeccc
Confidence            999 999999999999999999999774

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=4.6e-26  Score=162.64  Aligned_cols=103  Identities=23%  Similarity=0.299  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      +.+.+|..+++.++||||+++++++.+.+..|+||||+++|+|.+++.. .+.+++..+..++.|++.||.|+|++|++|
T Consensus       119 ~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH  198 (437)
T 4aw2_A          119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH  198 (437)
T ss_dssp             CCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence            3478899999999999999999999999999999999999999999987 457999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||||+|||++.++.+||+|||++.
T Consensus       199 rDLKp~NILl~~~g~vkL~DFGla~  223 (437)
T 4aw2_A          199 RDIKPDNILMDMNGHIRLADFGSCL  223 (437)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cccCHHHeeEcCCCCEEEcchhhhh
Confidence             999999999999999999999874

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.93  E-value=2.6e-25  Score=153.25  Aligned_cols=105  Identities=30%  Similarity=0.358  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+....++++||+++++|.+++.....+++..+..++.|++.||.|||++|++
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv  136 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA  136 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            45778999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCC----eeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGS----ILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~----~~kl~df~~~~  116 (131)
                      | ||+|+|||++.++    .+|++|||++.
T Consensus       137 H~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A          137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             CCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             cCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            9 9999999999887    79999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=1.1e-25  Score=162.24  Aligned_cols=118  Identities=25%  Similarity=0.358  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+.+..|+++||+++++|.+++...+.+++..+..++.|++.|+.|||++|++
T Consensus        59 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  138 (476)
T 2y94_A           59 VVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV  138 (476)
T ss_dssp             THHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            35678999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeeecc---ccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIENR---QVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~~~---~~~~~~~gtp~  129 (131)
                      | ||||+|||++.++.+|++|||++...   ......+|||.
T Consensus       139 HrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~  180 (476)
T 2y94_A          139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN  180 (476)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCST
T ss_pred             cccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcC
Confidence            9 99999999999999999999987532   23344556653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=2.4e-25  Score=156.02  Aligned_cols=115  Identities=19%  Similarity=0.267  Sum_probs=101.1

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |++.........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++...+ .++...+..++.|++.
T Consensus        79 K~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~  158 (373)
T 2qol_A           79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS  158 (373)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             EEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence            444333456677889999999999999999999999999999999999999999999998754 6899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       159 aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  195 (373)
T 2qol_A          159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR  195 (373)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             HHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence            999999999999 999999999999999999999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.93  E-value=3.1e-25  Score=151.35  Aligned_cols=115  Identities=20%  Similarity=0.329  Sum_probs=103.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK----------------   65 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~----------------   65 (131)
                      |++.........+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++.....                
T Consensus        59 K~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  138 (314)
T 2ivs_A           59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS  138 (314)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------
T ss_pred             EeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccc
Confidence            4444444566778899999999999999999999999999999999999999999999986432                


Q ss_pred             --------CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          66 --------LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        66 --------~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                              ++...+..++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       139 ~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~  198 (314)
T 2ivs_A          139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR  198 (314)
T ss_dssp             ------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCE
T ss_pred             cccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccc
Confidence                    788899999999999999999999999 999999999999999999999764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.93  E-value=4.6e-25  Score=154.95  Aligned_cols=107  Identities=21%  Similarity=0.253  Sum_probs=100.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+.+.+|+.+++.++||||+++++++.+.+..|+|+||+++++|.+++...  ..+++..+..++.|++.||.|||
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH  145 (389)
T 3gni_B           66 SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH  145 (389)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4556778899999999999999999999999999999999999999999999875  57999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ++|++| ||||+|||++.++.+|++|||.+
T Consensus       146 ~~~ivHrDlkp~NIll~~~~~~kl~dfg~~  175 (389)
T 3gni_B          146 HMGYVHRSVKASHILISVDGKVYLSGLRSN  175 (389)
T ss_dssp             HTTEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEcccccc
Confidence            999999 99999999999999999999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.93  E-value=1.3e-25  Score=155.57  Aligned_cols=115  Identities=23%  Similarity=0.362  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++||||+++++++.+++..++++||+ +|++.+++...+.+++.....++.|++.|+.|||++|++|
T Consensus        53 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH  131 (336)
T 3h4j_B           53 HMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH  131 (336)
T ss_dssp             SHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            456889999999999999999999999999999999999 6799999988888999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                       ||||+|||++.++.+|++|||++.   ........+|||
T Consensus       132 ~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~  171 (336)
T 3h4j_B          132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP  171 (336)
T ss_dssp             CCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTST
T ss_pred             cCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCc
Confidence             999999999999999999999875   222334445554

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.93  E-value=1.6e-25  Score=157.04  Aligned_cols=118  Identities=27%  Similarity=0.347  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHH-HHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDN-LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~-l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|..+ ++.++||||+++++++.+.+..|+||||+++|+|.+++...+.+++..++.++.|++.||.|||++|
T Consensus        80 ~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  159 (373)
T 2r5t_A           80 KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN  159 (373)
T ss_dssp             -----------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            344556677776 5778999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      ++| ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       160 ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~  203 (373)
T 2r5t_A          160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP  203 (373)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCC
T ss_pred             ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCc
Confidence            999 9999999999999999999998753    22344556766

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.93  E-value=4.2e-25  Score=151.49  Aligned_cols=115  Identities=23%  Similarity=0.365  Sum_probs=98.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC---------------------------------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD---------------------------------------   42 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~---------------------------------------   42 (131)
                      |++.....+...+.+.+|+.+++.++||||+++++++....                                       
T Consensus        37 K~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (332)
T 3qd2_B           37 KRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMD  116 (332)
T ss_dssp             EEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-----------------------------
T ss_pred             EEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeecc
Confidence            44443344556778999999999999999999999986543                                       


Q ss_pred             ------------------eeEEeeeccCCCChHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceE
Q psy2929          43 ------------------NIYMFLEYVQGGDLKSKIEACVK---LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIA  100 (131)
Q Consensus        43 ------------------~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nil  100 (131)
                                        ..+++|||+++++|.+++.....   .....+..++.|++.||.|||++|++| ||||+||+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  196 (332)
T 3qd2_B          117 PFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIF  196 (332)
T ss_dssp             ---------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             ccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEE
Confidence                              37999999999999999987543   455668899999999999999999999 99999999


Q ss_pred             EecCCeeeccceeeee
Q psy2929         101 WKVGSILAGGKLYFIE  116 (131)
Q Consensus       101 i~~~~~~kl~df~~~~  116 (131)
                      ++.++.+|++|||++.
T Consensus       197 l~~~~~~kL~DfG~a~  212 (332)
T 3qd2_B          197 FTMDDVVKVGDFGLVT  212 (332)
T ss_dssp             ECTTCCEEECCCTTCE
T ss_pred             EeCCCCEEEeecCccc
Confidence            9999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.93  E-value=5.8e-25  Score=149.73  Aligned_cols=104  Identities=22%  Similarity=0.369  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++... .+++..+..++.|++.|+.|+|++|++
T Consensus        60 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~  138 (297)
T 3fxz_A           60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVI  138 (297)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence            3566889999999999999999999999999999999999999999999775 689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+|||++.++.+|++|||++.
T Consensus       139 H~Dlkp~Nil~~~~~~~kl~Dfg~~~  164 (297)
T 3fxz_A          139 HRDIKSDNILLGMDGSVKLTDFGFCA  164 (297)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCCce
Confidence            9 999999999999999999999764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.93  E-value=7.4e-26  Score=160.48  Aligned_cols=114  Identities=21%  Similarity=0.309  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      +.+.+|..+++.++||||+++++++.+.+..|+||||+++|+|.+++... .+++.....++.|++.||.|||++|++| 
T Consensus       114 ~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHr  192 (410)
T 3v8s_A          114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHR  192 (410)
T ss_dssp             STHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence            34788999999999999999999999999999999999999999998764 7899999999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeeeccc-----cccCCCCCC
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIENRQ-----VRSGNVNGP  128 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~~~~-----~~~~~~gtp  128 (131)
                      ||||+|||++.++.+||+|||++....     ...+.+|||
T Consensus       193 DLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~  233 (410)
T 3v8s_A          193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP  233 (410)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCG
T ss_pred             cCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCc
Confidence            999999999999999999999874221     233556665

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=3.2e-25  Score=153.04  Aligned_cols=115  Identities=20%  Similarity=0.263  Sum_probs=103.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc------------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC------------------   63 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------------------   63 (131)
                      |++.........+.+.+|+.+++.++||||+++++++.+.+..|+++||+++++|.+++...                  
T Consensus        83 K~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  162 (343)
T 1luf_A           83 KMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR  162 (343)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------
T ss_pred             EEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccccccccc
Confidence            44444445566778999999999999999999999999999999999999999999999863                  


Q ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          64 ------VKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        64 ------~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                            ..++...++.++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       163 ~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  222 (343)
T 1luf_A          163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR  222 (343)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             ccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCc
Confidence                  45888999999999999999999999999 999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=158.79  Aligned_cols=105  Identities=22%  Similarity=0.244  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|..++..++||||+++++++.+.+..|+||||+++|+|.+++...+ .+++..++.++.|++.||.|+|++|+
T Consensus       104 ~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi  183 (412)
T 2vd5_A          104 EVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY  183 (412)
T ss_dssp             GGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34457889999999999999999999999999999999999999999998754 79999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       184 iHrDLKp~NILld~~g~vkL~DFGla~  210 (412)
T 2vd5_A          184 VHRDIKPDNILLDRCGHIRLADFGSCL  210 (412)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eecccCHHHeeecCCCCEEEeechhhe
Confidence            99 999999999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.93  E-value=2.3e-25  Score=159.47  Aligned_cols=114  Identities=23%  Similarity=0.325  Sum_probs=100.4

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV   75 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~   75 (131)
                      |++.+. .+....+.+.+|+.+++.++||||+++++++...     ...|+|+|++ +++|.+++.....+++..++.++
T Consensus        84 K~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~  162 (458)
T 3rp9_A           84 KKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLL  162 (458)
T ss_dssp             EEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHH
T ss_pred             EEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHH
Confidence            444432 3455677899999999999999999999999544     4689999998 56999999887789999999999


Q ss_pred             HHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          76 YQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        76 ~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++.||.|||++|++| ||||+|||++.++.+||+|||++.
T Consensus       163 ~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          163 YNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             HHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             HHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccch
Confidence            99999999999999999 999999999999999999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=6.4e-25  Score=154.11  Aligned_cols=115  Identities=19%  Similarity=0.344  Sum_probs=104.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+++++.+ +||||+++++++...+..++|+||+++++|.+++....                
T Consensus       107 K~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  186 (382)
T 3tt0_A          107 KMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE  186 (382)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCC
T ss_pred             EeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccccccccccc
Confidence            4444444566778899999999999 89999999999999999999999999999999998653                


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++..++.++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~  239 (382)
T 3tt0_A          187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR  239 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccc
Confidence            4899999999999999999999999999 999999999999999999999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.5e-25  Score=152.43  Aligned_cols=107  Identities=24%  Similarity=0.314  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++||||+++++.+.+.+..+++|||+++++|.+.+.... .+++..+..++.|++.|+.|||++
T Consensus        42 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  121 (321)
T 1tki_A           42 GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3455678899999999999999999999999999999999999999999997654 699999999999999999999999


Q ss_pred             cccc-cccccceEEec--CCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKV--GSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~--~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++.  ++.+|++|||++.
T Consensus       122 givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~  152 (321)
T 1tki_A          122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             TEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             CCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence            9999 99999999987  7899999999774

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.93  E-value=1.5e-25  Score=160.11  Aligned_cols=107  Identities=22%  Similarity=0.242  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-c
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-L   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~   88 (131)
                      ....+.+.+|+.+++.++||||+.+++++...+..|+||||+++++|.+++.....+++..+..++.|++.||.|||+ .
T Consensus       189 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  268 (446)
T 4ejn_A          189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK  268 (446)
T ss_dssp             ------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            344566788999999999999999999999999999999999999999999888889999999999999999999998 8


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++.++.+||+|||++.
T Consensus       269 giiHrDlkp~NIll~~~~~~kl~DFG~a~  297 (446)
T 4ejn_A          269 NVVYRDLKLENLMLDKDGHIKITDFGLCK  297 (446)
T ss_dssp             CCCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred             CEEECCCCHHHEEECCCCCEEEccCCCce
Confidence            9999 999999999999999999999875

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.92  E-value=6e-25  Score=152.86  Aligned_cols=115  Identities=17%  Similarity=0.238  Sum_probs=105.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMA   81 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (131)
                      |++.........+.+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++...+.+++..+..++.|++.|
T Consensus        64 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~  143 (360)
T 3eqc_A           64 KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG  143 (360)
T ss_dssp             EEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             EEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            33433445667788999999999999999999999999999999999999999999999988789999999999999999


Q ss_pred             HHHHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          82 LQYLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+|+. |++| ||+|+||+++.++.++++|||++.
T Consensus       144 l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  180 (360)
T 3eqc_A          144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  180 (360)
T ss_dssp             HHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             HHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCc
Confidence            9999996 9999 999999999999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=1.6e-25  Score=156.97  Aligned_cols=115  Identities=27%  Similarity=0.334  Sum_probs=103.4

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |.+.........+.+.+|+.+++.++||||+++++.+..++..|+||||+++|+|.+++...+ .++...+..++.|++.
T Consensus       145 K~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~  224 (377)
T 3cbl_A          145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA  224 (377)
T ss_dssp             EECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHH
T ss_pred             EEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            444434455566778999999999999999999999998889999999999999999998654 5899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|++|++| ||+|+|||++.++.+|++|||++.
T Consensus       225 ~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~  261 (377)
T 3cbl_A          225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR  261 (377)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             HHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCce
Confidence            999999999999 999999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.92  E-value=5.9e-25  Score=150.53  Aligned_cols=108  Identities=24%  Similarity=0.309  Sum_probs=98.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++...+   .+++..+..++.|++.||.|+
T Consensus        74 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (309)
T 3p86_A           74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL  153 (309)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45566789999999999999999999999999999999999999999999998754   389999999999999999999


Q ss_pred             Hhcc--ccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLM--SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~--~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|  ++| ||||+||+++.++.+|++|||++.
T Consensus       154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             HTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            9999  999 999999999999999999999874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=4.3e-25  Score=161.85  Aligned_cols=117  Identities=23%  Similarity=0.196  Sum_probs=103.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..|+||||+++|+|.+++...+  .+++..+..++.|++.||.|||++|
T Consensus       227 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g  306 (576)
T 2acx_A          227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER  306 (576)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45668899999999999999999999999999999999999999999998654  4899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeecc---ccccCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIENR---QVRSGNVNGP  128 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~~---~~~~~~~gtp  128 (131)
                      ++| ||||+|||++.++.+|++|||++...   ......+|||
T Consensus       307 IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~  349 (576)
T 2acx_A          307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV  349 (576)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCG
T ss_pred             EeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCc
Confidence            999 99999999999999999999987532   2233456665

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.92  E-value=1.2e-24  Score=147.44  Aligned_cols=107  Identities=22%  Similarity=0.290  Sum_probs=96.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++.+.+++..++++||+++ ++.+.+.. .+.+++..+..++.|++.||.|+|+
T Consensus        41 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~  119 (292)
T 3o0g_A           41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS  119 (292)
T ss_dssp             STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            344567788999999999999999999999999999999999976 66665554 5579999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||||+||+++.++.+|++|||++.
T Consensus       120 ~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~  149 (292)
T 3o0g_A          120 RNVLHRDLKPQNLLINRNGELKLANFGLAR  149 (292)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence            99999 999999999999999999999875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.92  E-value=9e-25  Score=157.85  Aligned_cols=119  Identities=24%  Similarity=0.359  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++.+....|+|+||+++|+|.+.+.....+++..+..++.|++.||.|||++|+
T Consensus        78 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  157 (494)
T 3lij_A           78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI  157 (494)
T ss_dssp             CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34567889999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cc-cccccceEEecC---Ceeeccceeeeec---cccccCCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVG---SILAGGKLYFIEN---RQVRSGNVNGPF  129 (131)
Q Consensus        91 ~h-dlk~~nili~~~---~~~kl~df~~~~~---~~~~~~~~gtp~  129 (131)
                      +| ||||+|||++..   +.+|++|||++..   ........|||+
T Consensus       158 vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  203 (494)
T 3lij_A          158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY  203 (494)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTT
T ss_pred             eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcC
Confidence            99 999999999764   4599999997642   233344556654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.92  E-value=1.3e-24  Score=151.13  Aligned_cols=119  Identities=21%  Similarity=0.251  Sum_probs=103.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +....+.+.+|+.+++.++||||+++++++..++..|+|+||+. |++.+.+.. ...+++..+..++.|++.||.|+|+
T Consensus        94 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~  172 (348)
T 1u5q_A           94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS  172 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34456778999999999999999999999999999999999997 588888764 4479999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeeccccccCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP  128 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~~~gtp  128 (131)
                      +|++| ||+|+|||++.++.+|++|||++..........|||
T Consensus       173 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~  214 (348)
T 1u5q_A          173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP  214 (348)
T ss_dssp             TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCc
Confidence            99999 999999999999999999999876554444555554

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.92  E-value=8.4e-25  Score=155.79  Aligned_cols=114  Identities=23%  Similarity=0.338  Sum_probs=101.4

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV   75 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~   75 (131)
                      |++.+. .+....+.+.+|+.+++.++||||+++++.+...     ...|+|+|++. ++|.+++.....+++..++.++
T Consensus        57 K~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~  135 (432)
T 3n9x_A           57 KKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTIL  135 (432)
T ss_dssp             EEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHH
T ss_pred             EEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHH
Confidence            444432 2455677899999999999999999999999776     46899999986 5999999887789999999999


Q ss_pred             HHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          76 YQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        76 ~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++.||.|||++|++| ||||+|||++.++.+||+|||++.
T Consensus       136 ~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            99999999999999999 999999999999999999999875

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.92  E-value=1.3e-24  Score=157.25  Aligned_cols=118  Identities=25%  Similarity=0.309  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+....|+|+||+++|+|.+.+.....+++..+..++.|++.||.|||++|++
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  168 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIV  168 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            45678999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             c-cccccceEEecCC---eeeccceeeeec---cccccCCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGS---ILAGGKLYFIEN---RQVRSGNVNGPF  129 (131)
Q Consensus        92 h-dlk~~nili~~~~---~~kl~df~~~~~---~~~~~~~~gtp~  129 (131)
                      | ||+|+|||++.++   .+|++|||++..   ........|||+
T Consensus       169 H~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~  213 (504)
T 3q5i_A          169 HRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY  213 (504)
T ss_dssp             CSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTT
T ss_pred             eCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcC
Confidence            9 9999999998876   699999998752   223344456653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.92  E-value=1e-24  Score=149.57  Aligned_cols=115  Identities=20%  Similarity=0.157  Sum_probs=99.5

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~   76 (131)
                      |++.........+.+.+|+.+++.++||||+++++++....  ..+++|||+++++|.+++....   .+++..+..++.
T Consensus        40 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~  119 (319)
T 4euu_A           40 KVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR  119 (319)
T ss_dssp             EEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHH
T ss_pred             EEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHH
Confidence            44443333344567889999999999999999999998765  6799999999999999998654   389999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEE----ecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAW----KVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili----~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|++|++| ||||+|||+    +..+.+|++|||++.
T Consensus       120 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A          120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            9999999999999999 999999999    777889999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.92  E-value=3.5e-25  Score=151.48  Aligned_cols=108  Identities=20%  Similarity=0.282  Sum_probs=98.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe----eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +....+.+.+|+.+++.++||||+++++.+.....    .|+||||+++++|.+++...+.+++..+..++.|++.||.|
T Consensus        52 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  131 (311)
T 3ork_A           52 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF  131 (311)
T ss_dssp             SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            45566788999999999999999999999876543    49999999999999999988889999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       132 lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A          132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             HHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             HHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            99999999 999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=1.8e-24  Score=151.02  Aligned_cols=104  Identities=24%  Similarity=0.358  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++||||+++++++.+.+..|+++||+++++|.+++...+.+++..+..++.|++.||.|||++|++|
T Consensus        60 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH  139 (361)
T 3uc3_A           60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH  139 (361)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            35688999999999999999999999999999999999999999999988778999999999999999999999999999


Q ss_pred             -cccccceEEecCCe--eeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSI--LAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~--~kl~df~~~~  116 (131)
                       ||||+|||++.++.  +|++|||++.
T Consensus       140 ~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A          140 RDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             CCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             CCCCHHHEEEcCCCCceEEEeecCccc
Confidence             99999999987765  9999999775

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.92  E-value=1.7e-24  Score=149.15  Aligned_cols=108  Identities=23%  Similarity=0.316  Sum_probs=98.4

Q ss_pred             cHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .......+.+|+.+++.+. ||||+++++++.+....|+||||+++++|.+++.....+++..+..++.|++.||.|||+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~  124 (325)
T 3kn6_A           45 SKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD  124 (325)
T ss_dssp             EGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3345567889999999997 999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ccccc-cccccceEEecCC---eeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGS---ILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~---~~kl~df~~~~  116 (131)
                      +|++| ||+|+|||++.++   .+|++|||++.
T Consensus       125 ~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A          125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             TTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             CCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            99999 9999999998766   89999999775

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.92  E-value=1.5e-24  Score=146.69  Aligned_cols=115  Identities=29%  Similarity=0.396  Sum_probs=100.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQ   77 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~   77 (131)
                      |++.........+.+.+|+.+++.++||||+++++.+.+....++++||+++++|.+.+...    ..+++..+..++.|
T Consensus        53 K~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~q  132 (285)
T 3is5_A           53 KTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ  132 (285)
T ss_dssp             EEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             EEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHH
Confidence            33333333345677899999999999999999999999999999999999999999988643    46999999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEE---ecCCeeeccceeeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      ++.||.|+|++|++| ||+|+||++   +.++.++++|||++.
T Consensus       133 i~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~  175 (285)
T 3is5_A          133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE  175 (285)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred             HHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence            999999999999999 999999999   456789999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=2.2e-24  Score=151.19  Aligned_cols=107  Identities=22%  Similarity=0.378  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+.+... ..+++.....++.|++.||.|||+.
T Consensus       127 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  206 (373)
T 2x4f_A          127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM  206 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356678999999999999999999999999999999999999999999988754 3689999999999999999999999


Q ss_pred             cccc-cccccceEE--ecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAW--KVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili--~~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||+  +.++.+|++|||++.
T Consensus       207 ~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~  237 (373)
T 2x4f_A          207 YILHLDLKPENILCVNRDAKQIKIIDFGLAR  237 (373)
T ss_dssp             TEECCCCCGGGEEEEETTTTEEEECCCSSCE
T ss_pred             CcccccCCHHHEEEecCCCCcEEEEeCCCce
Confidence            9999 999999999  456789999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.92  E-value=1.5e-24  Score=146.33  Aligned_cols=108  Identities=21%  Similarity=0.321  Sum_probs=94.5

Q ss_pred             ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH
Q psy2929           8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ......+.+.+|+.+++.++||||+++++++ ..+..|++|||+++++|.+++.... .+++..+..++.|++.||.|+|
T Consensus        55 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  133 (281)
T 1mp8_A           55 TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE  133 (281)
T ss_dssp             TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4556677899999999999999999999987 4566899999999999999998654 6899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+||+++.++.+|++|||++.
T Consensus       134 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A          134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             HTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             hCCeecccccHHHEEECCCCCEEECcccccc
Confidence            999999 999999999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.92  E-value=1.8e-24  Score=145.75  Aligned_cols=105  Identities=24%  Similarity=0.338  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+.+.....+++..+..++.|++.|+.|+|++|++
T Consensus        52 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~  131 (279)
T 3fdn_A           52 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI  131 (279)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            35668899999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       132 H~dlkp~Nili~~~~~~~l~Dfg~~~  157 (279)
T 3fdn_A          132 HRDIKPENLLLGSAGELKIADFGWSV  157 (279)
T ss_dssp             ECCCCGGGEEECTTSCEEECSCCEES
T ss_pred             cccCChHhEEEcCCCCEEEEeccccc
Confidence            9 999999999999999999999763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.92  E-value=2.8e-24  Score=144.55  Aligned_cols=105  Identities=27%  Similarity=0.407  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+....++++||+++++|.+.+.....+++..+..++.|++.|+.|+|++|++
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  128 (277)
T 3f3z_A           49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA  128 (277)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45678999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEE---ecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||++   +.++.++++|||++.
T Consensus       129 H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A          129 HRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             CCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            9 999999999   778999999999764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=1.3e-24  Score=158.61  Aligned_cols=118  Identities=18%  Similarity=0.142  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.+|..+++.++||||+++++++.+.+..|+||||+++|+|.+++....    .+++..+..++.|++.||.|||+
T Consensus       228 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~  307 (543)
T 3c4z_A          228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ  307 (543)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999999999997643    58999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeecc----ccccCCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIENR----QVRSGNVNGPF  129 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~~----~~~~~~~gtp~  129 (131)
                      +|++| ||||+|||++.+|.+|++|||++...    ......+|||.
T Consensus       308 ~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~  354 (543)
T 3c4z_A          308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG  354 (543)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTT
T ss_pred             cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCcc
Confidence            99999 99999999999999999999987522    22334467763

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.92  E-value=4.7e-24  Score=147.33  Aligned_cols=108  Identities=19%  Similarity=0.203  Sum_probs=101.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++.+.+.+..|+++||+++++|.+++.....+++..+..++.|++.||.|||++
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (335)
T 2owb_A           81 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN  160 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44567789999999999999999999999999999999999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       161 ~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          161 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            9999 999999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=6.7e-25  Score=148.27  Aligned_cols=108  Identities=15%  Similarity=0.134  Sum_probs=99.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++..... ++...+..++.|++.||.|||+
T Consensus        52 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  131 (289)
T 4fvq_A           52 HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE  131 (289)
T ss_dssp             GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            344567799999999999999999999999999999999999999999999987654 8999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCe--------eeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSI--------LAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~--------~kl~df~~~~  116 (131)
                      +|++| ||||+|||++.++.        +|++|||++.
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~  169 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI  169 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCT
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCcccc
Confidence            99999 99999999998887        9999999764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.92  E-value=4.1e-24  Score=144.09  Aligned_cols=108  Identities=24%  Similarity=0.277  Sum_probs=100.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+.+.....+++..+..++.|++.|+.|+|++
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (284)
T 3kk8_A           45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN  124 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            55567789999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCe---eeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.   ++++|||++.
T Consensus       125 ~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A          125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            9999 99999999987655   9999999764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=8.3e-25  Score=152.93  Aligned_cols=115  Identities=21%  Similarity=0.224  Sum_probs=101.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------CCCHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------KLSEETCKCI   74 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~   74 (131)
                      |++...........+.+|+.+++.++||||+++++++.+....|+||||+++|+|.+++....       .++...++.+
T Consensus       107 K~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i  186 (367)
T 3l9p_A          107 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV  186 (367)
T ss_dssp             EECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHH
T ss_pred             EecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHH
Confidence            444444456677789999999999999999999999999999999999999999999998653       4888899999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCC---eeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGS---ILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~---~~kl~df~~~~  116 (131)
                      +.|++.||.|||++|++| ||||+|||++.++   .+|++|||++.
T Consensus       187 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            999999999999999999 9999999999554   59999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.92  E-value=3.8e-24  Score=144.05  Aligned_cols=119  Identities=21%  Similarity=0.275  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----cCCCHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ......+.+|+..+..+ +||||+++++++.+++..++++||+++++|.+++...    ..+++..+..++.|++.||.|
T Consensus        51 ~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~  130 (289)
T 1x8b_A           51 SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY  130 (289)
T ss_dssp             SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            44566788999999998 8999999999999999999999999999999999864    468999999999999999999


Q ss_pred             HHhccccc-cccccceEEecC-------------------CeeeccceeeeeccccccCCCCCC
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVG-------------------SILAGGKLYFIENRQVRSGNVNGP  128 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~-------------------~~~kl~df~~~~~~~~~~~~~gtp  128 (131)
                      +|++|++| ||+|+||+++.+                   ..++++|||.+..........|+|
T Consensus       131 lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~  194 (289)
T 1x8b_A          131 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS  194 (289)
T ss_dssp             HHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCG
T ss_pred             HHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCc
Confidence            99999999 999999999844                   478999999876444433334443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.92  E-value=1.6e-24  Score=147.18  Aligned_cols=115  Identities=19%  Similarity=0.230  Sum_probs=98.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQI   78 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~   78 (131)
                      |++.........+.+.+|+.+++.++||||+++++.+...  ...++++||+++++|.+++... ..++...+..++.|+
T Consensus        56 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i  135 (302)
T 4e5w_A           56 KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI  135 (302)
T ss_dssp             EEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             EEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHH
Confidence            3343333344557789999999999999999999999876  5689999999999999999654 469999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.||.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       136 ~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A          136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK  174 (302)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             HHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence            99999999999999 999999999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.92  E-value=9.4e-25  Score=157.41  Aligned_cols=106  Identities=25%  Similarity=0.339  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++.+....|+++||+++++|.+.+.....+++..+..++.|++.||.|||++|+
T Consensus        63 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  142 (486)
T 3mwu_A           63 KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI  142 (486)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34677899999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cc-cccccceEEe---cCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWK---VGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~---~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++   .++.+|++|||++.
T Consensus       143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             CCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            99 9999999995   45679999999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=1.5e-24  Score=149.13  Aligned_cols=109  Identities=21%  Similarity=0.320  Sum_probs=97.4

Q ss_pred             ccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------CCCHHH
Q psy2929           8 LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEET   70 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~   70 (131)
                      ......+.+.+|+.+++.+ +||||+++++++.+.+..|++||++++++|.+++....                .+++..
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (327)
T 1fvr_A           64 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ  143 (327)
T ss_dssp             ------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHH
T ss_pred             cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHH
Confidence            3455667789999999999 89999999999999999999999999999999997653                589999


Q ss_pred             HHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          71 CKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       144 ~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~  190 (327)
T 1fvr_A          144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  190 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCc
Confidence            9999999999999999999999 999999999999999999999875

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.92  E-value=2.7e-24  Score=149.54  Aligned_cols=105  Identities=25%  Similarity=0.298  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+++..|+||||+++++|.+.+....    .+++..+..++.|++.||.|||+
T Consensus        69 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~  148 (351)
T 3c0i_A           69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD  148 (351)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999988876432    48999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCe---eeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                      +|++| ||||+|||++.++.   +|++|||++.
T Consensus       149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~  181 (351)
T 3c0i_A          149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI  181 (351)
T ss_dssp             TTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred             CCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence            99999 99999999987655   9999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.2e-24  Score=148.93  Aligned_cols=115  Identities=18%  Similarity=0.228  Sum_probs=102.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      |.+.........+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++... ..++...+..++.|++.
T Consensus        79 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~  158 (333)
T 1mqb_A           79 KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA  158 (333)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence            33433345566778999999999999999999999999999999999999999999999865 46899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       159 aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          159 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             HHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence            999999999999 999999999999999999999774

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=7.1e-24  Score=143.73  Aligned_cols=108  Identities=19%  Similarity=0.203  Sum_probs=101.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++++.+.+..++++|++++++|.+++.....+++..+..++.|++.|+.|+|++
T Consensus        55 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  134 (294)
T 2rku_A           55 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN  134 (294)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44567788999999999999999999999999999999999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       135 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  163 (294)
T 2rku_A          135 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT  163 (294)
T ss_dssp             TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CccccCCChHhEEEcCCCCEEEEeccCce
Confidence            9999 999999999999999999999775

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.3e-24  Score=150.25  Aligned_cols=115  Identities=24%  Similarity=0.366  Sum_probs=98.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++.+...+..|++|||+++|+|.+++....                
T Consensus        81 K~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  160 (344)
T 1rjb_A           81 KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL  160 (344)
T ss_dssp             EEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC-------------
T ss_pred             EecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhccc
Confidence            3343333445567799999999999 89999999999999999999999999999999998643                


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -------KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -------~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                             .+++..+..++.|++.||.|||++|++| ||+|+||+++.++.+|++|||++.
T Consensus       161 ~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~  220 (344)
T 1rjb_A          161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR  220 (344)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGS
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCc
Confidence                   2688899999999999999999999999 999999999999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=1.4e-24  Score=148.03  Aligned_cols=115  Identities=23%  Similarity=0.241  Sum_probs=102.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+..++++|++++++|.+++....                
T Consensus        59 K~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  138 (313)
T 1t46_A           59 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD  138 (313)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC-------------
T ss_pred             HhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccc
Confidence            4444334455678899999999999 89999999999999999999999999999999998653                


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 --KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 --~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                        .+++..++.++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       139 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  193 (313)
T 1t46_A          139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR  193 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGS
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccc
Confidence              3889999999999999999999999999 999999999999999999999764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.8e-24  Score=146.61  Aligned_cols=115  Identities=18%  Similarity=0.216  Sum_probs=101.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCee-EEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI-YMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~-~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~   79 (131)
                      |.+.........+.+.+|+.+++.++||||+++++++.+.+.. ++++|++.+++|.+++... ..++...+..++.|++
T Consensus        55 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~  134 (298)
T 3pls_A           55 KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA  134 (298)
T ss_dssp             EEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHH
T ss_pred             eeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHH
Confidence            3444444556778899999999999999999999999877665 8999999999999999864 4688899999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       135 ~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  172 (298)
T 3pls_A          135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR  172 (298)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred             HHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence            9999999999999 999999999999999999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=2.1e-24  Score=148.03  Aligned_cols=106  Identities=21%  Similarity=0.334  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc------CCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV------KLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~l~   83 (131)
                      ....+.+.+|+.+++.++||||+++++++.+++..++++||++ ++|.+++....      .++...+..++.|++.||.
T Consensus        44 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~  122 (317)
T 2pmi_A           44 EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA  122 (317)
T ss_dssp             TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHH
Confidence            3344678899999999999999999999999999999999997 49999987542      4888999999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |||++|++| ||||+|||++.++.+|++|||++.
T Consensus       123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  156 (317)
T 2pmi_A          123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR  156 (317)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred             HHHHCCeeeCCCChHHeEEcCCCCEEECcCccce
Confidence            999999999 999999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.92  E-value=1.8e-24  Score=150.81  Aligned_cols=118  Identities=13%  Similarity=0.102  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHcCC---CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-----ccCCCHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLS---HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----CVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .....+.+|..+++.++   |+||+.+++.+...+..|+||||+++|+|.+++..     ...+++..++.++.|++.||
T Consensus       106 ~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L  185 (365)
T 3e7e_A          106 ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI  185 (365)
T ss_dssp             CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            34456778888888886   89999999999999999999999999999999974     34689999999999999999


Q ss_pred             HHHHhccccc-cccccceEEec-----------CCeeeccceeeeec------cccccCCCCCC
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKV-----------GSILAGGKLYFIEN------RQVRSGNVNGP  128 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~-----------~~~~kl~df~~~~~------~~~~~~~~gtp  128 (131)
                      .|+|++|++| ||||+|||++.           ++.+|++|||++..      .......+|||
T Consensus       186 ~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~  249 (365)
T 3e7e_A          186 EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETS  249 (365)
T ss_dssp             HHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTT
T ss_pred             HHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCC
Confidence            9999999999 99999999998           89999999998842      22334455665

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.92  E-value=1.2e-24  Score=162.26  Aligned_cols=119  Identities=18%  Similarity=0.198  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|..++..+ +||+|+.+++++.+.+..|+||||+++|+|.+++...+.+++..+..++.|++.||.|||++|
T Consensus       383 ~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  462 (674)
T 3pfq_A          383 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  462 (674)
T ss_dssp             TTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456688899999988 699999999999999999999999999999999998888999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp~  129 (131)
                      ++| ||||+|||++.++.+||+|||++..    .......+|||.
T Consensus       463 IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~  507 (674)
T 3pfq_A          463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD  507 (674)
T ss_dssp             EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSS
T ss_pred             eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCc
Confidence            999 9999999999999999999998752    333445567763

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=2.6e-24  Score=148.37  Aligned_cols=115  Identities=17%  Similarity=0.331  Sum_probs=102.6

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+..|+|+||+++++|.+++....                
T Consensus        73 K~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  152 (334)
T 2pvf_A           73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE  152 (334)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred             eeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence            3444344556677899999999999 89999999999999999999999999999999998643                


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++...++.++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  205 (334)
T 2pvf_A          153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR  205 (334)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccc
Confidence            3788899999999999999999999999 999999999999999999999775

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.92  E-value=1.8e-24  Score=145.24  Aligned_cols=108  Identities=23%  Similarity=0.330  Sum_probs=100.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++.+.+.+..|+++|++++++|.+++.....++...+..++.|++.||.++|++
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (276)
T 2yex_A           45 AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI  124 (276)
T ss_dssp             CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            33456778999999999999999999999999999999999999999999988766799999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||.+.
T Consensus       125 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  153 (276)
T 2yex_A          125 GITHRDIKPENLLLDERDNLKISDFGLAT  153 (276)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CeeccCCChHHEEEccCCCEEEeeCCCcc
Confidence            9999 999999999999999999998764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.92  E-value=2.8e-24  Score=146.63  Aligned_cols=108  Identities=25%  Similarity=0.296  Sum_probs=100.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      +....+.+.+|+.+++.++||||+++++++...+..++++||++++++.+++.....++...+..++.|++.|+.|+|++
T Consensus        42 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~  121 (311)
T 4agu_A           42 DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH  121 (311)
T ss_dssp             -HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456778899999999999999999999999999999999999999999888777899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  150 (311)
T 4agu_A          122 NCIHRDVKPENILITKHSVIKLCDFGFAR  150 (311)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCcCCCCChhhEEEcCCCCEEEeeCCCch
Confidence            9999 999999999999999999999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.91  E-value=1e-24  Score=151.39  Aligned_cols=115  Identities=17%  Similarity=0.281  Sum_probs=101.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCe-eEEeeeccCCCChHHHHHhccC--------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKSKIEACVK--------------   65 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~-~~lv~e~~~~~~l~~~~~~~~~--------------   65 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+. .++++||+++|+|.+++.....              
T Consensus        58 K~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  137 (359)
T 3vhe_A           58 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQ  137 (359)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------
T ss_pred             EEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhc
Confidence            4454444556677899999999999 79999999999987654 8999999999999999986432              


Q ss_pred             ----------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          66 ----------------------------------------------------LSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        66 ----------------------------------------------------~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                                                                          ++...+..++.|++.||.|||++|++| 
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~  217 (359)
T 3vhe_A          138 GKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR  217 (359)
T ss_dssp             ----------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             ccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence                                                                788899999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeee
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||||+|||++.++.+|++|||++.
T Consensus       218 Dikp~NIll~~~~~~kl~Dfg~a~  241 (359)
T 3vhe_A          218 DLAARNILLSEKNVVKICDFGLAR  241 (359)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGS
T ss_pred             CCChhhEEEcCCCcEEEEecccee
Confidence            999999999999999999999874

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=4.8e-24  Score=146.26  Aligned_cols=114  Identities=18%  Similarity=0.276  Sum_probs=102.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      |++.........+.+.+|+.+++.++||||+++++++.+.  ...++++||+++++|.+++... .+++..+..++.|++
T Consensus        66 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~  144 (318)
T 3lxp_A           66 KALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQIC  144 (318)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHH
T ss_pred             EEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHH
Confidence            4555445566778899999999999999999999999884  5789999999999999998765 589999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .++.++|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       145 ~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             HHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence            9999999999999 999999999999999999999775

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.91  E-value=5.8e-24  Score=143.89  Aligned_cols=108  Identities=28%  Similarity=0.347  Sum_probs=99.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +....+.+.+|+.+++.++||||+++++++..    ....++++||+++++|.+++.....++...+..++.|++.||.|
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  144 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  144 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence            56677889999999999999999999999875    35689999999999999999987789999999999999999999


Q ss_pred             HHhcc--ccc-cccccceEEe-cCCeeeccceeeee
Q psy2929          85 LHSLM--SVN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~--~~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      +|+.+  ++| ||+|+||+++ .++.++++|||++.
T Consensus       145 lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             HHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             HHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            99999  999 9999999997 78999999999764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.91  E-value=3.8e-24  Score=146.58  Aligned_cols=115  Identities=22%  Similarity=0.207  Sum_probs=102.3

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------cCCCHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------VKLSEETC   71 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------~~~~~~~~   71 (131)
                      |.+...........+.+|+.+++.++||||+++++++.+.+..++++|++++++|.+++...          ..++...+
T Consensus        61 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  140 (322)
T 1p4o_A           61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM  140 (322)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHH
T ss_pred             EecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHH
Confidence            44444445566777999999999999999999999999999999999999999999999753          24688899


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       141 ~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~  186 (322)
T 1p4o_A          141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  186 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccc
Confidence            999999999999999999999 999999999999999999999875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.91  E-value=2.5e-24  Score=147.78  Aligned_cols=105  Identities=25%  Similarity=0.313  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+.+..++++|++++++|.+++.....+++..+..++.|++.||.|+|++|++
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iv  137 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            35678999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCC----eeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGS----ILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~----~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++    .++++|||++.
T Consensus       138 H~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             cCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            9 9999999999887    79999999775

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.91  E-value=4e-24  Score=144.33  Aligned_cols=104  Identities=21%  Similarity=0.364  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++||||+++++++.+.+..|+++|++++++|.+.+...+.+++..+..++.|++.|+.|+|++|++|
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  137 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH  137 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            46788999999999999999999999999999999999999999999998778999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||+|+||+++.++.++++|||++.
T Consensus       138 ~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A          138 RDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCCHHHEEEcCCCCEEEecccccc
Confidence             999999999999999999999764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.91  E-value=4.4e-24  Score=152.78  Aligned_cols=105  Identities=17%  Similarity=0.275  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+++.++||||+++++.+.... ..|+||||+++|+|.+++...+.  ++...+..++.|++.||.|||++
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  308 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  308 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999987765 78999999999999999987653  78899999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +++| ||+|+|||++.++.+|++|||++.
T Consensus       309 ~ivHrDlkp~Nill~~~~~~kl~DfG~a~  337 (450)
T 1k9a_A          309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK  337 (450)
T ss_dssp             TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence            9999 999999999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.91  E-value=2.7e-24  Score=147.28  Aligned_cols=105  Identities=21%  Similarity=0.298  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++||||+++++++.+++..+++|||+++ ++.+.+.... .+++..+..++.|++.||.|+|++|
T Consensus        61 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  139 (311)
T 3niz_A           61 GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR  139 (311)
T ss_dssp             CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456788999999999999999999999999999999999975 8888877644 5899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       140 ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  167 (311)
T 3niz_A          140 ILHRDLKPQNLLINSDGALKLADFGLAR  167 (311)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccCCCchHhEEECCCCCEEEccCcCce
Confidence            999 999999999999999999999875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.91  E-value=9.9e-25  Score=157.11  Aligned_cols=107  Identities=27%  Similarity=0.351  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++++.+.+..|+++|++.+++|.+.+.....+++..+..++.|++.||.|||++|
T Consensus        67 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A           67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567799999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             ccc-cccccceEE---ecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||+   +.++.+|++|||++.
T Consensus       147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          147 IVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             eeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            999 999999999   567899999999764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.8e-24  Score=151.53  Aligned_cols=115  Identities=20%  Similarity=0.157  Sum_probs=99.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~   76 (131)
                      |++.........+.+.+|+.+++.++||||+++++++....  ..+++|||+++++|.+++....   .+++..++.++.
T Consensus        40 K~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~  119 (396)
T 4eut_A           40 KVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR  119 (396)
T ss_dssp             EEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHH
T ss_pred             EEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHH
Confidence            44443333344567889999999999999999999998765  6799999999999999998654   389999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEE----ecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAW----KVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili----~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|++|++| ||||+|||+    +..+.+|++|||++.
T Consensus       120 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A          120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             HHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            9999999999999999 999999999    677889999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.91  E-value=6.2e-24  Score=146.07  Aligned_cols=104  Identities=25%  Similarity=0.426  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..+++|||+++++|.+++... .+++..+..++.|++.||.|+|+.|++
T Consensus        85 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~~iv  163 (321)
T 2c30_A           85 RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVI  163 (321)
T ss_dssp             SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4567889999999999999999999999999999999999999999988753 689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.+|++|||++.
T Consensus       164 H~Dlkp~NIll~~~~~~kl~Dfg~~~  189 (321)
T 2c30_A          164 HRDIKSDSILLTLDGRVKLSDFGFCA  189 (321)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCCCHHHEEECCCCcEEEeeeeeee
Confidence            9 999999999999999999999764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.91  E-value=3.4e-24  Score=145.48  Aligned_cols=115  Identities=21%  Similarity=0.227  Sum_probs=100.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEE-eCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVL-WKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~   79 (131)
                      |.+....+....+.+.+|+.+++.++||||+++++++. .++..++++|++++++|.+++.... .++...+..++.|++
T Consensus        59 k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~  138 (298)
T 3f66_A           59 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA  138 (298)
T ss_dssp             EEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred             EecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence            33333445667788999999999999999999999864 4567899999999999999997643 588999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       139 ~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~  176 (298)
T 3f66_A          139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR  176 (298)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred             HHHHHHHhCCccCCCCchheEEECCCCCEEECcccccc
Confidence            9999999999999 999999999999999999999774

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=3.3e-24  Score=147.61  Aligned_cols=110  Identities=18%  Similarity=0.245  Sum_probs=100.1

Q ss_pred             cccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--------------cCCCHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--------------VKLSEETC   71 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--------------~~~~~~~~   71 (131)
                      .......+.+.+|+.+++.+ +||||+++++++...+..++++||+++|+|.+++...              ..++...+
T Consensus        87 ~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (333)
T 2i1m_A           87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL  166 (333)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHH
T ss_pred             ccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHH
Confidence            33455677899999999999 8999999999999999999999999999999999753              24788999


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       167 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  212 (333)
T 2i1m_A          167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR  212 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGC
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccc
Confidence            999999999999999999999 999999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=2.9e-24  Score=145.66  Aligned_cols=108  Identities=21%  Similarity=0.289  Sum_probs=98.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.++||||+++++++...  ...++++||+++++|.+++.... .+++..+..++.|++.||.|+
T Consensus        51 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l  130 (295)
T 3ugc_A           51 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  130 (295)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH
Confidence            455667899999999999999999999998654  45899999999999999998754 599999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||||+||+++.++.+|++|||++.
T Consensus       131 H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~  162 (295)
T 3ugc_A          131 GTKRYIHRDLATRNILVENENRVKIGDFGLTK  162 (295)
T ss_dssp             HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred             hcCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence            9999999 999999999999999999999875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.91  E-value=3.5e-24  Score=146.90  Aligned_cols=108  Identities=19%  Similarity=0.245  Sum_probs=94.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCee------EEeeeccCCCChHHHHHhcc------CCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI------YMFLEYVQGGDLKSKIEACV------KLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~------~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~   76 (131)
                      .....+.+.+|+.+++.++||||+++++++......      ++++||+++++|.+++....      .++...+..++.
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~  144 (323)
T 3qup_A           65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV  144 (323)
T ss_dssp             -CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHH
Confidence            344567899999999999999999999999877655      99999999999999997543      588999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|++|++| ||||+||+++.++.+|++|||++.
T Consensus       145 qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~  185 (323)
T 3qup_A          145 DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR  185 (323)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred             HHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence            9999999999999999 999999999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1e-23  Score=144.15  Aligned_cols=108  Identities=19%  Similarity=0.197  Sum_probs=100.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ++...+.+.+|+.+++.++||||+++++++..++..|+++|++++++|.+++...+.+++..+..++.|++.|+.|+|++
T Consensus        74 ~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~  153 (309)
T 2h34_A           74 DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA  153 (309)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456789999999999999999999999999999999999999999999999877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       154 ~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~  182 (309)
T 2h34_A          154 GATHRDVKPENILVSADDFAYLVDFGIAS  182 (309)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred             cCCcCCCChHHEEEcCCCCEEEecCccCc
Confidence            9999 999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.91  E-value=2e-24  Score=146.24  Aligned_cols=104  Identities=24%  Similarity=0.340  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+++..++++|++++ ++.+++... +.+++..+..++.|++.||.|+|++|+
T Consensus        43 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (288)
T 1ob3_A           43 IPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV  121 (288)
T ss_dssp             CCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            346788999999999999999999999999999999999976 999988864 468999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+||+++.++.+|++|||++.
T Consensus       122 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (288)
T 1ob3_A          122 LHRDLKPQNLLINREGELKIADFGLAR  148 (288)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEeECcccc
Confidence            99 999999999999999999999764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.91  E-value=3.8e-24  Score=147.37  Aligned_cols=107  Identities=15%  Similarity=0.143  Sum_probs=96.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++++.... .+++++++.+|+|.+++... ..++...+..++.|++.||.|+|+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~  135 (327)
T 3poz_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  135 (327)
T ss_dssp             ---CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            4455677999999999999999999999998755 77899999999999999874 468999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||||+|||++.++.+|++|||++.
T Consensus       136 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A          136 RRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             CCeeCCCCChheEEECCCCCEEEccCccee
Confidence            99999 999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.91  E-value=4.8e-24  Score=143.23  Aligned_cols=105  Identities=26%  Similarity=0.380  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..|+++|++++++|.+++.....+++..+..++.|++.|+.++|++|++
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  133 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV  133 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            35578899999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       134 H~dl~p~Nil~~~~~~~~l~dfg~~~  159 (276)
T 2h6d_A          134 HRDLKPENVLLDAHMNAKIADFGLSN  159 (276)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred             cCCCChhhEEECCCCCEEEeeccccc
Confidence            9 999999999999999999999764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=4.6e-24  Score=143.05  Aligned_cols=104  Identities=18%  Similarity=0.301  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.+++.... .++...+..++.|++.|+.++|++|++
T Consensus        49 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  128 (269)
T 4hcu_A           49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI  128 (269)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4568999999999999999999999999999999999999999999997643 589999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       129 H~dikp~Nil~~~~~~~kl~Dfg~~~  154 (269)
T 4hcu_A          129 HRDLAARNCLVGENQVIKVSDFGMTR  154 (269)
T ss_dssp             CSCCCGGGEEECGGGCEEECCTTGGG
T ss_pred             cCCcchheEEEcCCCCEEeccccccc
Confidence            9 999999999999999999999764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.91  E-value=1.8e-24  Score=148.57  Aligned_cols=105  Identities=18%  Similarity=0.184  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+|+.+++.++||||+++++++...+..++++||+++++|.+++....    .+++..+..++.|++.||.|+|+
T Consensus        70 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  149 (326)
T 3uim_A           70 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD  149 (326)
T ss_dssp             CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            33468899999999999999999999999999999999999999999998653    38899999999999999999999


Q ss_pred             c---cccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 L---MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~---~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .   |++| ||+|+|||++.++.+|++|||++.
T Consensus       150 ~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~  182 (326)
T 3uim_A          150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK  182 (326)
T ss_dssp             SSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             CCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence            9   9999 999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.91  E-value=4e-24  Score=158.59  Aligned_cols=107  Identities=15%  Similarity=0.202  Sum_probs=98.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      +....+.+.+|+.+++.++||||+++++++.. +..++||||+++|+|.+++.....+++..+..++.|++.||.|||++
T Consensus       410 ~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~  488 (635)
T 4fl3_A          410 DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES  488 (635)
T ss_dssp             CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456789999999999999999999999864 45789999999999999998877899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++.++.+||+|||++.
T Consensus       489 ~iiHrDLkp~NILl~~~~~~kL~DFGla~  517 (635)
T 4fl3_A          489 NFVHRDLAARNVLLVTQHYAKISDFGLSK  517 (635)
T ss_dssp             TCCCSCCSGGGEEEEETTEEEECCTTHHH
T ss_pred             CEeCCCCChHhEEEeCCCCEEEEEcCCcc
Confidence            9999 999999999999999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.91  E-value=6.1e-24  Score=145.26  Aligned_cols=106  Identities=24%  Similarity=0.287  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.+ +||||+++++.+.+.+..|++|||+++++|.+++.....+++..+..++.|++.||.|+|++|
T Consensus        52 ~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (316)
T 2ac3_A           52 HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG  131 (316)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456788999999885 799999999999999999999999999999999998878999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCe---eeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.   +|++|||++.
T Consensus       132 ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A          132 IAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            999 99999999998776   9999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.91  E-value=4.6e-24  Score=150.28  Aligned_cols=107  Identities=23%  Similarity=0.305  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ......+.+|+.+++.++||||+++++++.+....+++|||+++++|.+++.... .+++..+..++.|++.||.|||++
T Consensus        89 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A           89 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4456678999999999999999999999999999999999999999999987654 689999999999999999999999


Q ss_pred             cccc-cccccceEEec--CCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKV--GSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~--~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++.  .+.+|++|||++.
T Consensus       169 givHrDlkp~NIll~~~~~~~vkL~DFG~a~  199 (387)
T 1kob_A          169 SIVHLDIKPENIMCETKKASSVKIIDFGLAT  199 (387)
T ss_dssp             TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             CeeecccchHHeEEecCCCCceEEEecccce
Confidence            9999 99999999974  4679999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=7.2e-24  Score=143.59  Aligned_cols=106  Identities=14%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++++ ..+..++++|++++++|.+++.....++...+..++.|++.||.|+|++|
T Consensus        59 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           59 PALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34467799999999999999999999998 66678999999999999999998778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A          138 FVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence            999 999999999999999999999764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.6e-24  Score=150.83  Aligned_cols=105  Identities=20%  Similarity=0.271  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.+ .||||+.+++.+...+..++||||+++++|.+++.....+++..+..++.|++.||.|||++|+
T Consensus       101 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  180 (355)
T 1vzo_A          101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI  180 (355)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            345577899999999 6999999999999999999999999999999999987789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       181 vH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          181 IYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             CCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             ccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            99 999999999999999999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.91  E-value=6e-24  Score=143.32  Aligned_cols=104  Identities=17%  Similarity=0.251  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++.. ...+++..+..++.|++.|+.|+|++|++
T Consensus        63 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  142 (283)
T 3gen_A           63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL  142 (283)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45688999999999999999999999999999999999999999999986 45799999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       143 H~dikp~Nili~~~~~~kl~Dfg~~~  168 (283)
T 3gen_A          143 HRDLAARNCLVNDQGVVKVSDFGLSR  168 (283)
T ss_dssp             CSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred             CCCCccceEEEcCCCCEEEccccccc
Confidence            9 999999999999999999999764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.91  E-value=6.7e-24  Score=142.08  Aligned_cols=104  Identities=18%  Similarity=0.266  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++.+....++++|++++++|.+++...+ .+++..+..++.|++.|+.|+|+.|++
T Consensus        47 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  126 (268)
T 3sxs_A           47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI  126 (268)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4568899999999999999999999999999999999999999999998754 599999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       127 H~dikp~Nil~~~~~~~~l~Dfg~~~  152 (268)
T 3sxs_A          127 HRDLAARNCLVDRDLCVKVSDFGMTR  152 (268)
T ss_dssp             ESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred             cCCcCcceEEECCCCCEEEccCccce
Confidence            9 999999999999999999999774

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.91  E-value=9.3e-24  Score=145.48  Aligned_cols=108  Identities=24%  Similarity=0.263  Sum_probs=99.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      .....+.+.+|+.+++.++||||+++++++...+..|+++||++++++.++......++...+..++.|++.|+.|+|++
T Consensus        64 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  143 (331)
T 4aaa_A           64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH  143 (331)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44556678899999999999999999999999999999999999988888877777899999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       144 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  172 (331)
T 4aaa_A          144 NIIHRDIKPENILVSQSGVVKLCDFGFAR  172 (331)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred             CEEccCcChheEEEcCCCcEEEEeCCCce
Confidence            9999 999999999999999999999764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=9.1e-24  Score=142.85  Aligned_cols=114  Identities=16%  Similarity=0.232  Sum_probs=101.2

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      |++.........+.+.+|+.+++.++||||+++++.+ ..+..++++|++++++|.+++... ..++...+..++.|++.
T Consensus        43 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~  121 (287)
T 1u59_A           43 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM  121 (287)
T ss_dssp             EEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred             EecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHH
Confidence            4444444566778899999999999999999999999 556689999999999999999754 36899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.++|+.|++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  158 (287)
T 1u59_A          122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  158 (287)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             HHHHHHHCCEeeCCCchheEEEcCCCCEEECccccee
Confidence            999999999999 999999999999999999999775

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.91  E-value=4.7e-24  Score=148.25  Aligned_cols=105  Identities=30%  Similarity=0.349  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++...+..++++||+++++|.+++...+.+++..+..++.|++.||.|+|++|++
T Consensus        91 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv  170 (349)
T 2w4o_A           91 DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV  170 (349)
T ss_dssp             --------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            45668899999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEec---CCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      | ||+|+|||++.   ++.+|++|||++.
T Consensus       171 H~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          171 HRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             CCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             ecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            9 99999999976   8899999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=5.4e-24  Score=146.69  Aligned_cols=106  Identities=23%  Similarity=0.338  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++++.+.+..++|+||+++ +|.+++.....++...+..++.|++.||.|||++|
T Consensus        74 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A           74 EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             ------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            33456678999999999999999999999999999999999975 99999998888999999999999999999999999


Q ss_pred             ccc-cccccceEEe-----cCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWK-----VGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~-----~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++     ..+.+|++|||++.
T Consensus       153 ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            999 9999999995     44559999999764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.91  E-value=4.6e-24  Score=157.75  Aligned_cols=114  Identities=16%  Similarity=0.225  Sum_probs=100.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |+++........+.+.+|+.+++.++||||+++++++.. +..++||||+++|+|.+++.... .++...+..++.|++.
T Consensus       369 K~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~  447 (613)
T 2ozo_A          369 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM  447 (613)
T ss_dssp             EECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred             EEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence            444433344567789999999999999999999999875 56899999999999999997543 5899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|||+++++| ||||+|||++.++.+||+|||++.
T Consensus       448 ~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~  484 (613)
T 2ozo_A          448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSK  484 (613)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred             HHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence            999999999999 999999999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.4e-24  Score=151.00  Aligned_cols=115  Identities=20%  Similarity=0.224  Sum_probs=97.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIA   79 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~   79 (131)
                      |.+....+....+.+.+|+.+++.++||||+++++++.. ++..++++||+++++|.+++.... .++...+..++.|++
T Consensus       123 K~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~  202 (373)
T 3c1x_A          123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA  202 (373)
T ss_dssp             EECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHH
Confidence            334333455667889999999999999999999998754 557899999999999999998654 578889999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .||.|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       203 ~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~  240 (373)
T 3c1x_A          203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR  240 (373)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             HHHHHHHHCCEecCccchheEEECCCCCEEEeeccccc
Confidence            9999999999999 999999999999999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.91  E-value=1.3e-23  Score=141.64  Aligned_cols=105  Identities=27%  Similarity=0.344  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+....++++|++++++|.+++.....+++..+..++.|++.||.++|++|++
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  130 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA  130 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            36778999999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEEecCC----eeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGS----ILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~----~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++    .++++|||++.
T Consensus       131 H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A          131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             CSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             CCCCChHHEEEecCCCCCCceEEEecccce
Confidence            9 9999999998877    79999998764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=5.6e-24  Score=148.78  Aligned_cols=118  Identities=22%  Similarity=0.316  Sum_probs=100.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      +....+.+.+|+.+++.++||||+++++++....      ..|+++|++ +++|.+++.. ..+++..+..++.|++.||
T Consensus        64 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L  141 (367)
T 1cm8_A           64 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGL  141 (367)
T ss_dssp             SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            4556778899999999999999999999997653      359999999 7799999877 4789999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeeecc-ccccCCCCCC
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENR-QVRSGNVNGP  128 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~-~~~~~~~gtp  128 (131)
                      .|+|++|++| ||||+||+++.++.+|++|||++... .......|||
T Consensus       142 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~  189 (367)
T 1cm8_A          142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR  189 (367)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCG
T ss_pred             HHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCC
Confidence            9999999999 99999999999999999999987532 2233344544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.90  E-value=7e-24  Score=153.37  Aligned_cols=105  Identities=19%  Similarity=0.297  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++++......|+||||+++|+|.+++....  .++...+..++.|++.||.|||+++
T Consensus       259 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999999999999999999998643  5889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.+||+|||++.
T Consensus       339 ivHrDlkp~NIll~~~~~~kl~DFG~a~  366 (495)
T 1opk_A          339 FIHRNLAARNCLVGENHLVKVADFGLSR  366 (495)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             cccCCCChhhEEECCCCcEEEeecccce
Confidence            999 999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=1.3e-23  Score=141.62  Aligned_cols=114  Identities=24%  Similarity=0.272  Sum_probs=100.0

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |.+.........+.+.+|+.+++.++||||+++++++.+ +..|+++|++++++|.+++.... .++...+..++.|++.
T Consensus        46 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~  124 (281)
T 3cc6_A           46 KTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK  124 (281)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             EecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHH
Confidence            333333345667889999999999999999999999764 45689999999999999998654 5899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       125 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A          125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             HHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             HHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCc
Confidence            999999999999 999999999999999999999764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.90  E-value=1.9e-23  Score=142.20  Aligned_cols=106  Identities=20%  Similarity=0.301  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++.+......++++||+++++|.+++.. +.++...+..++.|++.|+.++|++|
T Consensus        61 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~  139 (303)
T 3a7i_A           61 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK  139 (303)
T ss_dssp             STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567799999999999999999999999999999999999999999999875 47899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A          140 KIHRDIKAANVLLSEHGEVKLADFGVAG  167 (303)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CccCCCChheEEECCCCCEEEeecccce
Confidence            999 999999999999999999999764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=2.5e-23  Score=143.06  Aligned_cols=108  Identities=19%  Similarity=0.247  Sum_probs=98.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.++||||+++++.+..  ....++++||+++++|.+++... ..+++..+..++.|++.||.|+
T Consensus        64 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l  143 (327)
T 3lxl_A           64 GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL  143 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            45566779999999999999999999999874  45689999999999999999874 4699999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.++++|||++.
T Consensus       144 H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A          144 GSRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             HHTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             HhCCccCCCCChhhEEECCCCCEEEcccccce
Confidence            9999999 999999999999999999999775

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.90  E-value=2.4e-23  Score=145.46  Aligned_cols=105  Identities=23%  Similarity=0.320  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.+ +||||+.+++++......|++|||+++++|.+++.....+++..+..++.|++.||.|+|+.|+
T Consensus       142 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi  221 (365)
T 2y7j_A          142 VREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI  221 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456788999999999 7999999999999999999999999999999999887789999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| |++|+||+++.++.++++|||++.
T Consensus       222 ~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          222 VHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ecCCCCHHHEEECCCCCEEEEecCccc
Confidence            99 999999999999999999999764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=1.3e-23  Score=147.68  Aligned_cols=106  Identities=25%  Similarity=0.359  Sum_probs=95.8

Q ss_pred             cHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.+. ||||+++++++...+  ..|+||||++ ++|.+++.. ..+++.....++.|++.||.||
T Consensus        48 ~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~L  125 (388)
T 3oz6_A           48 NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYL  125 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence            4566778889999999997 999999999998654  6899999997 489988876 3789999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+.|++| ||||+|||++.++.+|++|||++.
T Consensus       126 H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A          126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             HHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             HhCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            9999999 999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.90  E-value=1.4e-23  Score=142.06  Aligned_cols=107  Identities=20%  Similarity=0.254  Sum_probs=93.9

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+.++++. .....++++||+++++|.+++... ..++...+..++.|++.||.|+|+
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~  138 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA  138 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            556778899999999999999999999954 556689999999999999999644 368999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||+|+||+++.++.++++|||++.
T Consensus       139 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  168 (289)
T 3og7_A          139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLAT  168 (289)
T ss_dssp             TTCCCSCCCGGGEEEETTTEEEECCCC---
T ss_pred             CCcccccCccceEEECCCCCEEEccceecc
Confidence            99999 999999999999999999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=5.5e-24  Score=158.79  Aligned_cols=124  Identities=27%  Similarity=0.285  Sum_probs=102.6

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe-----eEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      |++....+....+.+.+|+.+++.++||||+++++++...+.     .|+||||+++++|.+.+..  .+++..+..++.
T Consensus       112 K~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~  189 (681)
T 2pzi_A          112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLL  189 (681)
T ss_dssp             EESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHH
T ss_pred             EEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHH
Confidence            444444455667788999999999999999999999987665     6999999999999887665  689999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccccCCCCCC
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP  128 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~~~gtp  128 (131)
                      |++.+|.|+|++|++| ||||+|||++.+ .+|++|||++..........|||
T Consensus       190 qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~gt~  241 (681)
T 2pzi_A          190 EILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYGTP  241 (681)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCCCT
T ss_pred             HHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccCCccCCCc
Confidence            9999999999999999 999999999875 89999999886554445555665

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.90  E-value=9.1e-24  Score=142.11  Aligned_cols=104  Identities=20%  Similarity=0.272  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++.+.+.+..++++|++++++|.+++... ..+++..+..++.|++.|+.|+|++|++
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  134 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGIL  134 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            467899999999999999999999999999999999999999999999875 4689999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       135 H~dl~p~Nili~~~~~~kl~dfg~~~  160 (278)
T 3cok_A          135 HRDLTLSNLLLTRNMNIKIADFGLAT  160 (278)
T ss_dssp             CSSCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCCCHHHEEEcCCCCEEEEeeccee
Confidence            9 999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=5.5e-23  Score=140.24  Aligned_cols=108  Identities=27%  Similarity=0.369  Sum_probs=97.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +....+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++..    ...++...++.++.|++.||.|
T Consensus        72 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~  151 (310)
T 2wqm_A           72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH  151 (310)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            456777899999999999999999999999999999999999999999999874    3358999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++|++| ||+|+||+++.++.++++|||++.
T Consensus       152 LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGR  184 (310)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred             HhhCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence            99999999 999999999999999999999764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.90  E-value=2.3e-23  Score=144.22  Aligned_cols=106  Identities=21%  Similarity=0.236  Sum_probs=97.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCC--CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSH--PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h--~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +....+.+.+|+.+++.++|  |||+++++++......|++||+ .+++|.+++.....+++..+..++.|++.||.|||
T Consensus        47 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH  125 (343)
T 3dbq_A           47 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  125 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            45566789999999999976  9999999999999999999995 57799999998888999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++ ++.+|++|||++.
T Consensus       126 ~~~iiHrDikp~NIll~-~~~~kl~DFG~a~  155 (343)
T 3dbq_A          126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  155 (343)
T ss_dssp             HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             hCCeecCCCCcceEEEE-CCcEEEeeccccc
Confidence            999999 9999999997 6789999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=1.3e-23  Score=144.39  Aligned_cols=104  Identities=17%  Similarity=0.164  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ......+|+.+++.++||||+++++++....    ..++++||+++|+|.+++... .+++..+..++.|++.||.|+|+
T Consensus        61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~  139 (322)
T 3soc_A           61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHE  139 (322)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3445667899999999999999999998754    369999999999999999774 68999999999999999999999


Q ss_pred             c----------cccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 L----------MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~----------~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .          |++| ||||+|||++.++.+|++|||++.
T Consensus       140 ~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            9          9999 999999999999999999999874

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.90  E-value=8.3e-24  Score=151.98  Aligned_cols=125  Identities=20%  Similarity=0.292  Sum_probs=98.5

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCI   74 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   74 (131)
                      |++.+. ......+.+.+|+.+++.++||||+++++++....      ..|+||||+.+ ++.+.+..  .+++..+..+
T Consensus        93 K~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~  169 (464)
T 3ttj_A           93 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYL  169 (464)
T ss_dssp             EEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHH
T ss_pred             EEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHH
Confidence            444432 25566778899999999999999999999997653      46999999976 67666644  4889999999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccc---cccCCCCCCC
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQ---VRSGNVNGPF  129 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~---~~~~~~gtp~  129 (131)
                      +.|++.||.|||++|++| ||||+|||++.++.+||+|||++....   .....+|||+
T Consensus       170 ~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  228 (464)
T 3ttj_A          170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY  228 (464)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCT
T ss_pred             HHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCccccc
Confidence            999999999999999999 999999999999999999999875322   2344556653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.90  E-value=2.4e-23  Score=141.76  Aligned_cols=107  Identities=18%  Similarity=0.196  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC---VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+++.++||||+++++++.+.+..++++|++++++|.+++...   ..++......++.|++.||.|+|
T Consensus        71 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  150 (307)
T 2nru_A           71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH  150 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            445678999999999999999999999999999999999999999999999743   35899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++| ||+|+||+++.++.++++|||++.
T Consensus       151 ~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          151 ENHHIHRDIKSANILLDEAFTAKISDFGLAR  181 (307)
T ss_dssp             HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeecCCCCHHHEEEcCCCcEEEeeccccc
Confidence            999999 999999999999999999999764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.90  E-value=5.1e-24  Score=144.57  Aligned_cols=107  Identities=21%  Similarity=0.340  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh--------ccCCCHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA--------CVKLSEETCKCIVYQIAMA   81 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~   81 (131)
                      ....+.+.+|+.+++.++||||+++++.+..++..++++||+++++|.+++..        ...+++..+..++.|++.|
T Consensus        54 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  133 (303)
T 2vwi_A           54 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG  133 (303)
T ss_dssp             ------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHH
Confidence            34556788999999999999999999999999999999999999999999874        2358999999999999999


Q ss_pred             HHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       134 l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A          134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             HHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            99999999999 999999999999999999998753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.90  E-value=6.9e-24  Score=144.12  Aligned_cols=103  Identities=23%  Similarity=0.310  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++||||+++++.+.+  .+..|++|||+++++|.++... ..+++..+..++.|++.||.|+|++|+
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i  158 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKI  158 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4568899999999999999999999987  5678999999999998876443 478999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.+|++|||++.
T Consensus       159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~  185 (298)
T 2zv2_A          159 IHRDIKPSNLLVGEDGHIKIADFGVSN  185 (298)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             eccCCCHHHEEECCCCCEEEecCCCcc
Confidence            99 999999999999999999999774

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.90  E-value=4.8e-23  Score=139.70  Aligned_cols=106  Identities=25%  Similarity=0.311  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.+. ||||+++++.+...+..++++|++++++|.+++.....+++..+..++.|++.||.|+|++|
T Consensus        65 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  144 (298)
T 1phk_A           65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  144 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567889999999995 99999999999999999999999999999999998778999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       145 i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A          145 IVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cccCCCCcceEEEcCCCcEEEecccchh
Confidence            999 999999999999999999998764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.90  E-value=2.4e-23  Score=142.17  Aligned_cols=108  Identities=17%  Similarity=0.246  Sum_probs=95.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe-----eEEeeeccCCCChHHHHHh------ccCCCHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-----IYMFLEYVQGGDLKSKIEA------CVKLSEETCKCIVYQ   77 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~-----~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~~~   77 (131)
                      .....+.+.+|+.+++.++||||+++++++...+.     .++++|++++++|.+++..      ...+++..++.++.|
T Consensus        76 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q  155 (313)
T 3brb_A           76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD  155 (313)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHH
Confidence            45566789999999999999999999999977553     4999999999999999853      235899999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       156 i~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~  195 (313)
T 3brb_A          156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK  195 (313)
T ss_dssp             HHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred             HHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence            999999999999999 999999999999999999999764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=1.4e-23  Score=140.39  Aligned_cols=108  Identities=13%  Similarity=0.170  Sum_probs=98.3

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~   84 (131)
                      +....+.+.+|+.+++.++||||+++++++.+.  ...++++||+++++|.+++....  .+++..+..++.|++.||.|
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  126 (271)
T 3kmu_A           47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF  126 (271)
T ss_dssp             CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            456677899999999999999999999999877  67899999999999999998765  48999999999999999999


Q ss_pred             HHhcc--ccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLM--SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~--~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|+++  ++| ||+|+||+++.++.++++||++..
T Consensus       127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A          127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             HhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            99999  999 999999999999999998887653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=1.9e-23  Score=139.65  Aligned_cols=104  Identities=18%  Similarity=0.286  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++.+.+++..++++|++++++|.+++... ..++...+..++.|++.|+.++|++|++
T Consensus        47 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  126 (267)
T 3t9t_A           47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI  126 (267)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            467899999999999999999999999999999999999999999999875 3589999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++.++.++++|||++.
T Consensus       127 H~dl~p~Nili~~~~~~kl~dfg~~~  152 (267)
T 3t9t_A          127 HRDLAARNCLVGENQVIKVSDFGMTR  152 (267)
T ss_dssp             CSSCCGGGEEECGGGCEEECCTTGGG
T ss_pred             cCCCchheEEECCCCCEEEccccccc
Confidence            9 999999999999999999998764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.90  E-value=1.5e-23  Score=141.62  Aligned_cols=107  Identities=19%  Similarity=0.287  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ....+.+.+|+.+++.++||||+++++++.+++..|+++|++++++|.+++....  .++...+..++.|++.|+.|+|+
T Consensus        50 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (288)
T 3kfa_A           50 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK  129 (288)
T ss_dssp             STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH
Confidence            3356778999999999999999999999999999999999999999999998743  48999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||+|+||+++.++.++++|||++.
T Consensus       130 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~  159 (288)
T 3kfa_A          130 KNFIHRDLAARNCLVGENHLVKVADFGLSR  159 (288)
T ss_dssp             HTCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred             CCccCCCCCcceEEEcCCCCEEEccCccce
Confidence            99999 999999999999999999999764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=5.1e-24  Score=147.17  Aligned_cols=107  Identities=26%  Similarity=0.336  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--------------------------
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--------------------------   63 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--------------------------   63 (131)
                      ....+.+.+|+.+++.++||||+++++++.+.+..++|+||+++++|.+++...                          
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            456678999999999999999999999999999999999999999999988521                          


Q ss_pred             --------------cCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCC--eeeccceeeee
Q psy2929          64 --------------VKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGS--ILAGGKLYFIE  116 (131)
Q Consensus        64 --------------~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~--~~kl~df~~~~  116 (131)
                                    ..+++..+..++.|++.||.|||+++++| ||+|+||+++.++  .+|++|||++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~  218 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK  218 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCE
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccc
Confidence                          01356678889999999999999999999 9999999998776  89999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.90  E-value=5.2e-24  Score=151.23  Aligned_cols=102  Identities=27%  Similarity=0.459  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      ..+.+|+.+++.++||||+++++++. ....|++|||+++++|.+.+.....+++..+..++.|++.||.|||++|++| 
T Consensus       185 ~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHr  263 (419)
T 3i6u_A          185 LNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR  263 (419)
T ss_dssp             CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            35789999999999999999999874 4557999999999999999888778999999999999999999999999999 


Q ss_pred             cccccceEEecCC---eeeccceeeee
Q psy2929          93 QHKPRYIAWKVGS---ILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~---~~kl~df~~~~  116 (131)
                      ||||+|||++..+   .+|++|||++.
T Consensus       264 Dlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          264 DLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             CCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             CCChHhEEEecCCCcceEEEeecccce
Confidence            9999999997654   49999999774

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.90  E-value=8.2e-24  Score=144.41  Aligned_cols=115  Identities=17%  Similarity=0.277  Sum_probs=100.6

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhccC--------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACVK--------------   65 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~~--------------   65 (131)
                      |++.........+.+.+|+.+++.+ +||||+++++++...+ ..++++||+++++|.+++.....              
T Consensus        63 K~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  142 (316)
T 2xir_A           63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK  142 (316)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CT
T ss_pred             EecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhc
Confidence            4444444555667899999999999 6999999999987765 48999999999999999987543              


Q ss_pred             --CCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          66 --LSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        66 --~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                        ++...+..++.|++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       143 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  196 (316)
T 2xir_A          143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR  196 (316)
T ss_dssp             TCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCcccc
Confidence              788899999999999999999999999 999999999999999999999774

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.90  E-value=3e-23  Score=143.53  Aligned_cols=104  Identities=18%  Similarity=0.138  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCC-ChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGG-DLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++.+.+..++++|++.+| +|.+++.....+++..+..++.|++.||.|||++|++
T Consensus        73 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv  152 (335)
T 3dls_A           73 LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDII  152 (335)
T ss_dssp             TEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            345678999999999999999999999999999999998766 9999999888899999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.++.+|++|||++.
T Consensus       153 H~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          153 HRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             CSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EeccCHHHEEEcCCCcEEEeecccce
Confidence            9 999999999999999999999775

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=1.9e-23  Score=143.62  Aligned_cols=115  Identities=21%  Similarity=0.242  Sum_probs=100.8

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-------CCCHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-------KLSEETCKCI   74 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~   74 (131)
                      |++...........+.+|+.+++.++||||+++++++......|+++||+++++|.+++....       .++...++.+
T Consensus        66 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i  145 (327)
T 2yfx_A           66 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV  145 (327)
T ss_dssp             EECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHH
T ss_pred             EEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHH
Confidence            444334456667789999999999999999999999999999999999999999999998753       3788899999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEec---CCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      +.|++.||.|||++|++| ||+|+||+++.   ...++++|||++.
T Consensus       146 ~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             HHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            999999999999999999 99999999984   4469999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.90  E-value=1.5e-23  Score=144.43  Aligned_cols=107  Identities=15%  Similarity=0.143  Sum_probs=96.2

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++++.... .+++++++.+++|.+++... ..++...+..++.|++.||.|+|+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  135 (327)
T 3lzb_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED  135 (327)
T ss_dssp             SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            4446678999999999999999999999998765 78889999999999999864 468999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++| ||||+|||++.++.+|++|||++.
T Consensus       136 ~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A          136 RRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             CCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            99999 999999999999999999999874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.90  E-value=3.9e-24  Score=147.10  Aligned_cols=101  Identities=25%  Similarity=0.364  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccccc-
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSVN-   92 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~h-   92 (131)
                      .+.+|+.+++.++||||+++++++.+.+..+++|||+++ ++.+++...+ .++...+..++.|++.||.|+|++|++| 
T Consensus        46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~  124 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR  124 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             hHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence            456799999999999999999999999999999999975 9999888654 5899999999999999999999999999 


Q ss_pred             cccccceEEecCCeeeccceeeee
Q psy2929          93 QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||+|+||+++.++.+|++|||++.
T Consensus       125 Dikp~NIl~~~~~~~kl~Dfg~a~  148 (324)
T 3mtl_A          125 DLKPQNLLINERGELKLADFGLAR  148 (324)
T ss_dssp             SCCGGGEEECTTCCEEECSSSEEE
T ss_pred             CcCHHHEEECCCCCEEEccCcccc
Confidence            999999999999999999999875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.90  E-value=5.3e-23  Score=142.74  Aligned_cols=101  Identities=26%  Similarity=0.367  Sum_probs=92.1

Q ss_pred             HHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          16 FANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        16 ~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ..+|++++..+ +||||+++++++.+.+..|+||||+++|+|.+.+...+.+++..+..++.|++.||.|||++|++| |
T Consensus        62 ~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrD  141 (342)
T 2qr7_A           62 PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD  141 (342)
T ss_dssp             CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecc
Confidence            45678888877 799999999999999999999999999999999988888999999999999999999999999999 9


Q ss_pred             ccccceEEecC----Ceeeccceeeee
Q psy2929          94 HKPRYIAWKVG----SILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~----~~~kl~df~~~~  116 (131)
                      |||+|||+...    +.+|++|||++.
T Consensus       142 lkp~NIl~~~~~~~~~~~kl~Dfg~a~  168 (342)
T 2qr7_A          142 LKPSNILYVDESGNPESIRICDFGFAK  168 (342)
T ss_dssp             CCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred             CCHHHEEEecCCCCcCeEEEEECCCcc
Confidence            99999998543    359999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.90  E-value=4e-23  Score=145.48  Aligned_cols=106  Identities=21%  Similarity=0.233  Sum_probs=97.0

Q ss_pred             cHHHHHHHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +....+.+.+|+.+++.+.  ||||+++++++...+..|++|| +.+++|.+++.....+++.....++.|++.||.|||
T Consensus        94 ~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH  172 (390)
T 2zmd_A           94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  172 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5566788999999999996  5999999999999999999999 557799999998878999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++ ++.+|++|||++.
T Consensus       173 ~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~  202 (390)
T 2zmd_A          173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  202 (390)
T ss_dssp             TTTCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred             HCCeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence            999999 9999999995 6889999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.90  E-value=8.1e-24  Score=145.15  Aligned_cols=107  Identities=20%  Similarity=0.257  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ....+.+.+|+.+++.++||||+++++++...+..++++||+++++|.+++....    .+++.....++.|++.||.|+
T Consensus        76 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  155 (321)
T 2qkw_B           76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL  155 (321)
T ss_dssp             SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            3456779999999999999999999999999999999999999999999886543    488899999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.+|++|||++.
T Consensus       156 H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          156 HTRAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             HHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             cCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            9999999 999999999999999999999764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.90  E-value=4.3e-23  Score=140.55  Aligned_cols=105  Identities=25%  Similarity=0.349  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++.+.+.+..|+++|++++++|.+.+...+.+++..+..++.|++.|+.|+|++|++
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  128 (304)
T 2jam_A           49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV  128 (304)
T ss_dssp             ---HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            34568899999999999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             c-cccccceEE---ecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      | ||+|+||++   +.++.++++|||++.
T Consensus       129 H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A          129 HRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             CCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             ccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            9 999999999   778899999999764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.90  E-value=4.9e-23  Score=153.24  Aligned_cols=109  Identities=21%  Similarity=0.319  Sum_probs=98.9

Q ss_pred             cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         7 ~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .......+.+.+|+.+++.++||||+++++++ .++..|+||||+++|+|.+++.... .++...+..++.|++.||.|+
T Consensus       429 ~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L  507 (656)
T 2j0j_A          429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL  507 (656)
T ss_dssp             TTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            34556678899999999999999999999988 4566899999999999999998654 689999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||||+|||++.++.+|++|||++.
T Consensus       508 H~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          508 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             HHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             HhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence            9999999 999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.90  E-value=5.5e-23  Score=140.56  Aligned_cols=108  Identities=22%  Similarity=0.281  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~   80 (131)
                      +....+.+.+|+.+++.++||||+++++++..    ....|+++||+++++|.+++..    ...+++..++.++.|++.
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~  145 (317)
T 2buj_A           66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR  145 (317)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            45667789999999999999999999999873    3468999999999999999976    346899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       146 ~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~  182 (317)
T 2buj_A          146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN  182 (317)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             HHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence            999999999999 999999999999999999999653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.89  E-value=7.6e-23  Score=138.80  Aligned_cols=102  Identities=12%  Similarity=0.106  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+..++.++||||+++++++.+++..|++|||+++++|.+++...  ..+.....++.|++.||.|+|++|
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~g  149 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAG  149 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCC
Confidence            556678999999999999999999999999999999999999999999998653  466678889999999999999999


Q ss_pred             ccc-cccccceEEecCCeeecccee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      ++| ||||+|||++.++.+|+++++
T Consensus       150 ivH~Dikp~NIll~~~g~~kl~~~~  174 (286)
T 3uqc_A          150 VALSIDHPSRVRVSIDGDVVLAYPA  174 (286)
T ss_dssp             CCCCCCSGGGEEEETTSCEEECSCC
T ss_pred             CccCCCCcccEEEcCCCCEEEEecc
Confidence            999 999999999999999998764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.89  E-value=2.8e-25  Score=153.33  Aligned_cols=104  Identities=19%  Similarity=0.107  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHcCC---------CCCceeEEEEEE------------------------------eCCeeEEeeeccC
Q psy2929          12 NRKYFANEVDNLKSLS---------HPNIVTLYESVL------------------------------WKDNIYMFLEYVQ   52 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~---------h~~iv~l~~~~~------------------------------~~~~~~lv~e~~~   52 (131)
                      ..+.+.+|+.+++.++         ||||+.+.+.+.                              ..+..|+||||++
T Consensus        66 ~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~  145 (336)
T 2vuw_A           66 TFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF  145 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecC
Confidence            3467888888888775         777777776653                              2678999999999


Q ss_pred             CCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hccccc-cccccceEEecCC--------------------eeecc
Q psy2929          53 GGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH-SLMSVN-QHKPRYIAWKVGS--------------------ILAGG  110 (131)
Q Consensus        53 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~~~h-dlk~~nili~~~~--------------------~~kl~  110 (131)
                      +|++.+.+.. ..+++..++.++.|++.||.|+| ++|++| ||||+|||++.++                    .+||+
T Consensus       146 ~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~  224 (336)
T 2vuw_A          146 GGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSII  224 (336)
T ss_dssp             CCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEEC
T ss_pred             CCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEe
Confidence            9876665543 46899999999999999999999 999999 9999999999987                    89999


Q ss_pred             ceeeee
Q psy2929         111 KLYFIE  116 (131)
Q Consensus       111 df~~~~  116 (131)
                      |||++.
T Consensus       225 DFG~a~  230 (336)
T 2vuw_A          225 DYTLSR  230 (336)
T ss_dssp             CCTTCB
T ss_pred             eccccE
Confidence            999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.89  E-value=7.4e-23  Score=138.65  Aligned_cols=108  Identities=25%  Similarity=0.300  Sum_probs=97.0

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-------------CCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW-------------KDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCI   74 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~   74 (131)
                      .....+.+.+|+.+++.++||||+++++.+.+             ....|+++|++++++|.+++.... .+++..++.+
T Consensus        42 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  121 (303)
T 1zy4_A           42 TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL  121 (303)
T ss_dssp             EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHH
Confidence            34556778999999999999999999998865             356799999999999999998654 5788889999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       122 ~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  164 (303)
T 1zy4_A          122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK  164 (303)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred             HHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence            999999999999999999 999999999999999999999764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.89  E-value=2.5e-23  Score=149.01  Aligned_cols=104  Identities=18%  Similarity=0.229  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++.+. ....|+||||+++|+|.+++....  .++...+..++.|++.||.|||+++
T Consensus       226 ~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          226 SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567999999999999999999999885 567899999999999999998543  6888999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+|||++.++.+|++|||++.
T Consensus       305 ivHrDlkp~Nill~~~~~~kl~DFG~a~  332 (454)
T 1qcf_A          305 YIHRDLRAANILVSASLVCKIADFGLAR  332 (454)
T ss_dssp             CCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred             ccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence            999 999999999999999999999875

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.89  E-value=5.8e-23  Score=143.23  Aligned_cols=113  Identities=19%  Similarity=0.268  Sum_probs=98.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      |++.........+.+.+|+.+++.++||||+++++.+....     ..|+++|++.+ +|.+++... .+++..+..++.
T Consensus        58 K~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~-~~~~~~~~~i~~  135 (364)
T 3qyz_A           58 KKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLY  135 (364)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHC-CCCHHHHHHHHH
T ss_pred             EEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHhC-CCCHHHHHHHHH
Confidence            44443345556678999999999999999999999997653     58999999965 999988764 699999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|||++|++| ||+|+|||++.++.+|++|||++.
T Consensus       136 qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence            9999999999999999 999999999999999999999775

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=139.31  Aligned_cols=106  Identities=24%  Similarity=0.196  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          10 KENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .........|+..+..+ +||||+++++++...+..|+++|++ +++|.+.+...+ .+++..+..++.|++.||.|||+
T Consensus        97 ~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  175 (311)
T 3p1a_A           97 PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS  175 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34445555666655554 8999999999999999999999999 669988887654 59999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| ||||+|||++.++.+|++|||++.
T Consensus       176 ~~ivH~Dikp~NIll~~~~~~kl~DFG~a~  205 (311)
T 3p1a_A          176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLV  205 (311)
T ss_dssp             TTEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred             CCEecCCCCHHHEEECCCCCEEEccceeee
Confidence            99999 999999999999999999999764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.89  E-value=6.7e-23  Score=140.94  Aligned_cols=108  Identities=21%  Similarity=0.291  Sum_probs=97.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC--eeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD--NIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+  ..++++|++++++|.+++.... .++...+..++.|++.||.++
T Consensus        82 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L  161 (326)
T 2w1i_A           82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  161 (326)
T ss_dssp             CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3455677999999999999999999999987654  6799999999999999998754 589999999999999999999


Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++|++| ||+|+||+++.++.++++|||++.
T Consensus       162 H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          162 GTKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             HHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             HhCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            9999999 999999999999999999999764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=139.06  Aligned_cols=105  Identities=17%  Similarity=0.294  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..|+++|++++++|.+++.. ...++...+..++.|++.|+.|+|+.|+
T Consensus        67 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  146 (314)
T 3com_A           67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK  146 (314)
T ss_dssp             CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            346688999999999999999999999999999999999999999999974 4479999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.++++|||++.
T Consensus       147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~  173 (314)
T 3com_A          147 IHRDIKAGNILLNTEGHAKLADFGVAG  173 (314)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCCcCHHHEEECCCCCEEEeecccch
Confidence            99 999999999999999999999774

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.89  E-value=4.1e-23  Score=138.35  Aligned_cols=104  Identities=22%  Similarity=0.318  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc--
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM--   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~--   89 (131)
                      ..+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.+++.. ..+++..+..++.|++.|+.|+|++|  
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~  127 (271)
T 3dtc_A           49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIV  127 (271)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            356788999999999999999999999999999999999999999998864 47899999999999999999999999  


Q ss_pred             -ccc-cccccceEEec--------CCeeeccceeeee
Q psy2929          90 -SVN-QHKPRYIAWKV--------GSILAGGKLYFIE  116 (131)
Q Consensus        90 -~~h-dlk~~nili~~--------~~~~kl~df~~~~  116 (131)
                       ++| ||+|+||+++.        ++.++++|||++.
T Consensus       128 ~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A          128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             CCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             ceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence             889 99999999986        6789999999874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.89  E-value=1.4e-22  Score=140.78  Aligned_cols=106  Identities=22%  Similarity=0.217  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHcCC-----CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-----HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-----h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l   82 (131)
                      ....+...+|+.+++.+.     ||||+++++.+...+..++++|++ +++|.+++....  .++...+..++.|++.||
T Consensus        72 ~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL  150 (360)
T 3llt_A           72 KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKAL  150 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            445566788999999885     999999999999999999999999 889999998754  589999999999999999


Q ss_pred             HHHHhccccc-cccccceEEec-------------------------CCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKV-------------------------GSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~-------------------------~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||||+|||++.                         .+.+|++|||++.
T Consensus       151 ~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~  210 (360)
T 3llt_A          151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT  210 (360)
T ss_dssp             HHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCE
T ss_pred             HHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCce
Confidence            9999999999 99999999975                         7889999999875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.89  E-value=5.8e-23  Score=138.15  Aligned_cols=108  Identities=27%  Similarity=0.444  Sum_probs=96.8

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhcc----CCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~l   82 (131)
                      +....+.+.+|+.+++.++||||+++++.+..  ....|+++||+++++|.+++....    .+++..++.++.|++.|+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  124 (279)
T 2w5a_A           45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  124 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHH
Confidence            45667789999999999999999999998865  567899999999999999997643    389999999999999999


Q ss_pred             HHHHhcc-----ccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLM-----SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~-----~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|+.+     ++| ||+|+||+++.++.+|++|||++.
T Consensus       125 ~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A          125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             HHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             HHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            9999999     999 999999999999999999998763

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.89  E-value=1.2e-22  Score=137.55  Aligned_cols=107  Identities=25%  Similarity=0.250  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+++.++||||+++++++...+..++++|++++++|.+++....   .+++..+..++.|++.||.|+|
T Consensus        60 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  139 (295)
T 2clq_A           60 SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH  139 (295)
T ss_dssp             C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999999999999999999999999999999998653   4668888999999999999999


Q ss_pred             hccccc-cccccceEEec-CCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++. ++.++++|||++.
T Consensus       140 ~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~  171 (295)
T 2clq_A          140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK  171 (295)
T ss_dssp             HTTEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred             hCCEEccCCChhhEEEECCCCCEEEeeccccc
Confidence            999999 99999999998 8999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.89  E-value=5.6e-23  Score=145.19  Aligned_cols=103  Identities=24%  Similarity=0.339  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHH-cCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLK-SLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~l~-~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+|+.++. ..+||||+++++.+..    ....|+||||+++|+|.+++...+  .+++..+..++.|++.||.|||
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34677888774 4589999999999876    567899999999999999998654  5899999999999999999999


Q ss_pred             hccccc-cccccceEEec---CCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++.   ++.+||+|||++.
T Consensus       179 ~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~  212 (400)
T 1nxk_A          179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  212 (400)
T ss_dssp             HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence            999999 99999999998   7889999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.89  E-value=9.3e-23  Score=142.64  Aligned_cols=105  Identities=22%  Similarity=0.316  Sum_probs=93.4

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .....+.+.+|+.+++.++||||+++++.+...+      ..|+||||+.+ ++.+.+..  .++...+..++.|++.||
T Consensus        64 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al  140 (371)
T 2xrw_A           64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  140 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHH
Confidence            4556677899999999999999999999997665      68999999975 78888764  588999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       141 ~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             HHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            9999999999 999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=5.6e-24  Score=146.31  Aligned_cols=103  Identities=18%  Similarity=0.171  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      .+.+.+|+.+++.++||||+++++++. .+..++++||+.+++|.+++... +.+++..+..++.|++.||.|+|++|++
T Consensus        59 ~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  137 (325)
T 3kex_A           59 FQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV  137 (325)
T ss_dssp             BCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            345778999999999999999999885 45688999999999999999864 4688899999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.++.+|++|||++.
T Consensus       138 H~Dikp~Nil~~~~~~~kl~Dfg~a~  163 (325)
T 3kex_A          138 HRNLAARNVLLKSPSQVQVADFGVAD  163 (325)
T ss_dssp             CSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred             CCccchheEEECCCCeEEECCCCccc
Confidence            9 999999999999999999999875

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.89  E-value=3.6e-23  Score=144.74  Aligned_cols=118  Identities=22%  Similarity=0.337  Sum_probs=89.1

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      +....+.+.+|+.+++.++||||+++++.+...      ...|+++|++ +++|.+++.. ..++...+..++.|++.||
T Consensus        68 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL  145 (367)
T 2fst_X           68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGL  145 (367)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            455677888999999999999999999998754      4579999998 6799988876 4799999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeeeccc-cccCCCCCC
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQ-VRSGNVNGP  128 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~-~~~~~~gtp  128 (131)
                      .|+|++|++| ||||+|||++.++.+|++|||++.... ......||+
T Consensus       146 ~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~  193 (367)
T 2fst_X          146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR  193 (367)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCC
T ss_pred             HHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCc
Confidence            9999999999 999999999999999999999875322 223344554

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.89  E-value=1.4e-22  Score=139.61  Aligned_cols=102  Identities=21%  Similarity=0.171  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      +.+.+|+.+++.+ +||||+++++.+...+..+++||++ +++|.+++... ..+++..+..++.|++.||.|||++|++
T Consensus        49 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ii  127 (330)
T 2izr_A           49 PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI  127 (330)
T ss_dssp             CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4578899999999 8999999999999999999999999 88999999864 5799999999999999999999999999


Q ss_pred             c-cccccceEEecCCe-----eeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSI-----LAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~-----~kl~df~~~~  116 (131)
                      | ||||+|||++.++.     +|++|||++.
T Consensus       128 HrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A          128 YRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             CCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             ccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            9 99999999999887     9999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=4.4e-23  Score=142.98  Aligned_cols=102  Identities=24%  Similarity=0.365  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      +.+.+|+.+++.++||||+++++++.+.+..++++||+++ ++.+.+.... .+++..+..++.|++.||.|+|++|++|
T Consensus        57 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  135 (346)
T 1ua2_A           57 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH  135 (346)
T ss_dssp             THHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence            4678999999999999999999999999999999999976 8888887654 5888899999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||+|+|||++.++.+|++|||++.
T Consensus       136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A          136 RDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             CCCCHHHEEEcCCCCEEEEecccce
Confidence             999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.89  E-value=1.5e-22  Score=136.22  Aligned_cols=102  Identities=25%  Similarity=0.271  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEe----------------CCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHH
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLW----------------KDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVY   76 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~----------------~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~   76 (131)
                      .+.+|+.+++.++||||+++++.+..                ....++++||+++++|.+++...  ..+++..+..++.
T Consensus        50 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~  129 (284)
T 2a19_B           50 KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE  129 (284)
T ss_dssp             GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence            46789999999999999999998864                34579999999999999999754  4689999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.|+.|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  170 (284)
T 2a19_B          130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT  170 (284)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence            9999999999999999 999999999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.89  E-value=8.1e-24  Score=148.22  Aligned_cols=107  Identities=14%  Similarity=0.070  Sum_probs=90.0

Q ss_pred             cHHHHHHHHHHHH---HHHcCCCCCceeEE-------EEEEeCCe-----------------eEEeeeccCCCChHHHHH
Q psy2929           9 DKENRKYFANEVD---NLKSLSHPNIVTLY-------ESVLWKDN-----------------IYMFLEYVQGGDLKSKIE   61 (131)
Q Consensus         9 ~~~~~~~~~~e~~---~l~~~~h~~iv~l~-------~~~~~~~~-----------------~~lv~e~~~~~~l~~~~~   61 (131)
                      .....+.+.+|+.   .++.++||||++++       +.+..++.                 .|++|||+ +|+|.+++.
T Consensus       113 ~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~  191 (377)
T 3byv_A          113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGE  191 (377)
T ss_dssp             CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence            4456678999994   55556899999998       66655432                 78999999 579999998


Q ss_pred             hccCCCH-------HHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          62 ACVKLSE-------ETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        62 ~~~~~~~-------~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..+.+++       ..+..++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       192 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~  254 (377)
T 3byv_A          192 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV  254 (377)
T ss_dssp             HHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred             hccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhhe
Confidence            7655555       777789999999999999999999 999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.89  E-value=8.1e-23  Score=138.05  Aligned_cols=106  Identities=23%  Similarity=0.288  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++||||+++++++.... .++++|++++++|.+++... ..++...+..++.|++.|+.++|++
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  140 (291)
T 1u46_A           62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK  140 (291)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            345677899999999999999999999997765 88999999999999999864 4689999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       141 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A          141 RFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             CcccCCCchheEEEcCCCCEEEccccccc
Confidence            9999 999999999999999999998764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.89  E-value=8.7e-23  Score=138.48  Aligned_cols=104  Identities=22%  Similarity=0.371  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++++..++..|+++|++. ++|.+++...  ..++...+..++.|++.||.|+|++|
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (299)
T 2r3i_A           45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  123 (299)
T ss_dssp             CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34668899999999999999999999999999999999997 5999999865  36889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       124 i~H~dlkp~Nili~~~~~~kl~dfg~~~  151 (299)
T 2r3i_A          124 VLHRDLKPQNLLINTEGAIKLADFGLAR  151 (299)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECSTTHHH
T ss_pred             ccCCCCCHHHeEEcCCCCEEECcchhhh
Confidence            999 999999999999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.89  E-value=1.2e-22  Score=137.73  Aligned_cols=106  Identities=22%  Similarity=0.272  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHc--CCCCCceeEEEEEEeC----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKS--LSHPNIVTLYESVLWK----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~--~~h~~iv~l~~~~~~~----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (131)
                      ....+.+.+|.+++..  ++||||+++++.+...    ...|+++||+++|+|.+++... .+++..+..++.|++.|+.
T Consensus        41 ~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~  119 (301)
T 3q4u_A           41 SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLA  119 (301)
T ss_dssp             GGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHH
Confidence            3345556667777776  7899999999987653    4579999999999999999653 7899999999999999999


Q ss_pred             HHH--------hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLH--------SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh--------~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|        +.+++| ||||+|||++.++.+|++|||++.
T Consensus       120 ~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A          120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             HHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence            999        999999 999999999999999999999764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=4.1e-23  Score=147.83  Aligned_cols=103  Identities=21%  Similarity=0.262  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++||||+++++.+.. ...++||||+++|+|.+++...  ..++...+..++.|++.||.|||++++
T Consensus       223 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  301 (452)
T 1fmk_A          223 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  301 (452)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4678999999999999999999999865 6689999999999999999753  358999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.+|++|||++.
T Consensus       302 vHrDlkp~Nill~~~~~~kl~DfG~a~  328 (452)
T 1fmk_A          302 VHRDLRAANILVGENLVCKVADFGLAR  328 (452)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred             eCCCCChhhEEECCCCCEEECCCccce
Confidence            99 999999999999999999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.89  E-value=5.5e-23  Score=141.09  Aligned_cols=103  Identities=28%  Similarity=0.428  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      ...+.+|+.+++.++||||+++++++..++ .|+++||+++++|.+.+.....+++..+..++.|++.||.|+|++|++|
T Consensus        59 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  137 (322)
T 2ycf_A           59 ALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH  137 (322)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            445889999999999999999999987655 8999999999999999988778999999999999999999999999999


Q ss_pred             -cccccceEEecCCe---eeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                       ||+|+||+++.++.   +|++|||++.
T Consensus       138 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A          138 RDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             CCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             cCCCHHHEEEecCCCCCeEEEccCccce
Confidence             99999999987665   9999999764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.89  E-value=8.8e-23  Score=138.62  Aligned_cols=106  Identities=19%  Similarity=0.307  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++.. ...++...+..++.|++.|+.|+|++
T Consensus        57 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (302)
T 2j7t_A           57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK  136 (302)
T ss_dssp             -CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            34567788999999999999999999999999999999999999999998876 34699999999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      |++| ||+|+||+++.++.++++|||++
T Consensus       137 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A          137 RIIHRDLKAGNVLMTLEGDIRLADFGVS  164 (302)
T ss_dssp             TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred             CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence            9999 99999999999999999999975

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.89  E-value=1.1e-22  Score=137.33  Aligned_cols=101  Identities=22%  Similarity=0.279  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc--c
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM--S   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~--~   90 (131)
                      +.+.+|+.+++.++||||+++++.+.+..  ++++||+++++|.+.+.... .++...+..++.|++.|+.|+|++|  +
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i  145 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI  145 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            67899999999999999999999986655  69999999999988886544 6899999999999999999999999  9


Q ss_pred             cc-cccccceEEecCCe-----eeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSI-----LAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~-----~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.     +|++|||++.
T Consensus       146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~  177 (287)
T 4f0f_A          146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ  177 (287)
T ss_dssp             BCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred             ecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence            99 99999999988776     9999999774

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=1.5e-22  Score=136.85  Aligned_cols=107  Identities=25%  Similarity=0.337  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+.+.....+++..+..++.|++.|+.++|++|
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  141 (287)
T 2wei_A           62 NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN  141 (287)
T ss_dssp             SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567789999999999999999999999999999999999999999999987778999999999999999999999999


Q ss_pred             ccc-cccccceEEecC---Ceeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVG---SILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~---~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++..   +.+|++|||++.
T Consensus       142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A          142 IVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            999 999999999764   469999999764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.89  E-value=1e-22  Score=141.23  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC--------CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK--------DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l   82 (131)
                      ....+.+|+.+++.++||||+++++.+...        +..|+|+||+++ ++.+.+... ..++...+..++.|++.||
T Consensus        59 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l  137 (351)
T 3mi9_A           59 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGL  137 (351)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            345678899999999999999999999874        468999999976 777777654 4799999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       138 ~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A          138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence            9999999999 999999999999999999999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.89  E-value=1.6e-22  Score=140.02  Aligned_cols=113  Identities=21%  Similarity=0.269  Sum_probs=98.6

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      |++...........+.+|+.+++.++||||+++++.+...     ...|+++|++. ++|.+++.. ..++...+..++.
T Consensus        42 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~  119 (353)
T 2b9h_A           42 KKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIY  119 (353)
T ss_dssp             EEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHH
T ss_pred             EeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHH
Confidence            4444334555667788999999999999999999988764     56899999996 589998876 3789999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       120 qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A          120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            9999999999999999 999999999999999999999764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.88  E-value=1.3e-22  Score=140.52  Aligned_cols=101  Identities=17%  Similarity=0.094  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          15 YFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        15 ~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+|+..++.++||||+++++.+..    ....|++||++ +++|.+++...+.+++..+..++.|++.||.|||++|+
T Consensus        94 ~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  172 (345)
T 2v62_A           94 DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEY  172 (345)
T ss_dssp             HHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            36678889999999999999999988    67899999999 88999999877789999999999999999999999999


Q ss_pred             cc-cccccceEEecCC--eeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGS--ILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~--~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++  .+|++|||++.
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~  201 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSY  201 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCE
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCce
Confidence            99 9999999999887  99999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.88  E-value=4e-22  Score=134.60  Aligned_cols=104  Identities=15%  Similarity=0.237  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ..+.+.++...++.++||||+++++++.+.+..++++||+++ ++.+++..    ...+++..+..++.|++.|+.|+|+
T Consensus        49 ~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (290)
T 3fme_A           49 QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS  127 (290)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            334445555567888999999999999999999999999975 88777653    3479999999999999999999999


Q ss_pred             c-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 L-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      + |++| ||+|+||+++.++.+|++|||++.
T Consensus       128 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T 3fme_A          128 KLSVIHRDVKPSNVLINALGQVKMCDFGISG  158 (290)
T ss_dssp             HSCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred             cCCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence            8 9999 999999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.88  E-value=4.2e-23  Score=150.54  Aligned_cols=103  Identities=21%  Similarity=0.262  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+|+.++||||+++++.+.. ...|+||||+++|+|.+++...  ..++...+..++.|++.||.|||++++
T Consensus       306 ~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  384 (535)
T 2h8h_A          306 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  384 (535)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4678999999999999999999999865 6689999999999999999753  358999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++.++.+||+|||++.
T Consensus       385 vHrDlkp~NIll~~~~~~kl~DFG~a~  411 (535)
T 2h8h_A          385 VHRDLRAANILVGENLVCKVADFGLAR  411 (535)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred             eCCCCCHhhEEEcCCCcEEEcccccce
Confidence            99 999999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.88  E-value=1.2e-22  Score=136.77  Aligned_cols=104  Identities=20%  Similarity=0.276  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++.+. .+..++++|++++++|.+++....  .++...+..++.|++.||.++|++|
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           51 SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567899999999999999999999886 455899999999999999997543  6899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||+|+||+++.++.++++|||++.
T Consensus       130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~  157 (279)
T 1qpc_A          130 YIHRDLRAANILVSDTLSCKIADFGLAR  157 (279)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eeccCCCHhhEEEcCCCCEEECCCcccc
Confidence            999 999999999999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.88  E-value=8.8e-23  Score=137.37  Aligned_cols=105  Identities=17%  Similarity=0.274  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeC-CeeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+++.++||||+++++.+... +..++++|++++++|.+++.....  +++..+..++.|++.|+.++|++
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  136 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999997654 468999999999999999986543  88899999999999999999999


Q ss_pred             cccc-cccccceEEecCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++| ||+|+||+++.++.++++|||++.
T Consensus       137 ~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~  165 (278)
T 1byg_A          137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK  165 (278)
T ss_dssp             TCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred             CccccCCCcceEEEeCCCcEEEeeccccc
Confidence            9999 999999999999999999999775

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.88  E-value=3.1e-22  Score=139.57  Aligned_cols=100  Identities=17%  Similarity=0.146  Sum_probs=89.6

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeC----CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWK----DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~----~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...|+..++.++||||+++++++...    ...|++|||+ +++|.+++... ..+++..+..++.|++.||.|||++|+
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i  173 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEY  173 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34566677788999999999999775    4589999999 88999999876 479999999999999999999999999


Q ss_pred             cc-cccccceEEe--cCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWK--VGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~--~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++  .++.+||+|||++.
T Consensus       174 iHrDlkp~Nill~~~~~~~~kl~DFG~a~  202 (364)
T 3op5_A          174 VHGDIKASNLLLNYKNPDQVYLVDYGLAY  202 (364)
T ss_dssp             ECCCCCGGGEEEESSCTTCEEECCCTTCE
T ss_pred             EEecCCHHHEEEecCCCCeEEEEECCcce
Confidence            99 9999999999  88999999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.88  E-value=9e-23  Score=141.08  Aligned_cols=103  Identities=17%  Similarity=0.266  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHH------HHh--ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK------IEA--CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~------~~~--~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      +.+.+|+.+++.++||||+++++.+.+.+..+++|||+++++|.++      +..  ...+++..+..++.|++.|+.|+
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  167 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI  167 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            7799999999999999999999999999999999999999999998      655  45789999999999999999999


Q ss_pred             Hh-ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          86 HS-LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        86 h~-~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+ .|++| ||+|+||+++.++.++++|||++.
T Consensus       168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  200 (348)
T 2pml_X          168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESE  200 (348)
T ss_dssp             HHTSCEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             hccCCEeecCCChHhEEEcCCCcEEEecccccc
Confidence            99 99999 999999999999999999999765

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=5e-22  Score=136.64  Aligned_cols=103  Identities=17%  Similarity=0.239  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHcC--CCCCceeEEEEEEeC----CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSL--SHPNIVTLYESVLWK----DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        13 ~~~~~~e~~~l~~~--~h~~iv~l~~~~~~~----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .....+|.+++...  +||||+++++.+...    ...|++|||+++++|.+++... .+++..+..++.|++.||.|+|
T Consensus        73 ~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH  151 (337)
T 3mdy_A           73 EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLH  151 (337)
T ss_dssp             HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            34455566666655  899999999999887    6789999999999999999765 6899999999999999999999


Q ss_pred             hc--------cccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SL--------MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~--------~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.        |++| ||||+|||++.++.+|++|||++.
T Consensus       152 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence            99        9999 999999999999999999999774

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.88  E-value=8.7e-23  Score=140.54  Aligned_cols=106  Identities=23%  Similarity=0.234  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+|+.+++.+. ||||+++++++...+..++++||+++++|.+++...  ..+++..++.++.|++.||.|||+
T Consensus        70 ~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~  149 (327)
T 3lm5_A           70 DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ  149 (327)
T ss_dssp             ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34567889999999995 799999999999999999999999999999988643  468999999999999999999999


Q ss_pred             ccccc-cccccceEEec---CCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      +|++| ||+|+||+++.   .+.+|++|||++.
T Consensus       150 ~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~  182 (327)
T 3lm5_A          150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR  182 (327)
T ss_dssp             TTEECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred             CCeecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence            99999 99999999988   7899999999875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.88  E-value=3e-22  Score=137.59  Aligned_cols=103  Identities=25%  Similarity=0.297  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+.+|+.+++.++ ||||+++++.+.+  ....++++|+++++++.+++..   +++..+..++.|++.||.|||+
T Consensus        72 ~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~  148 (330)
T 3nsz_A           72 VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHS  148 (330)
T ss_dssp             CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHh
Confidence            34567899999999997 9999999999987  5678999999999999888743   8889999999999999999999


Q ss_pred             ccccc-cccccceEEecCC-eeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGS-ILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~-~~kl~df~~~~  116 (131)
                      +|++| ||||+|||++.++ .+|++|||++.
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence            99999 9999999999776 89999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=5.4e-22  Score=136.78  Aligned_cols=107  Identities=16%  Similarity=0.194  Sum_probs=96.0

Q ss_pred             cHHHHHHHHHHHHHHHc--CCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKS--LSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~--~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      .....+.+.+|.++++.  ++||||+++++.+....    ..++++||+++++|.+++... .+++..++.++.|++.|+
T Consensus        74 ~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l  152 (342)
T 1b6c_B           74 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGL  152 (342)
T ss_dssp             CGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHH
Confidence            33445667888998887  68999999999998876    789999999999999999764 689999999999999999


Q ss_pred             HHHH--------hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLH--------SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh--------~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|        +.+++| ||+|+||+++.++.+|++|||++.
T Consensus       153 ~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  195 (342)
T ss_dssp             HHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence            9999        899999 999999999999999999999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.88  E-value=2e-22  Score=140.99  Aligned_cols=105  Identities=25%  Similarity=0.329  Sum_probs=93.7

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCee------EEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI------YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~------~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      +....+.+.+|+.+++.++||||+++++++...+..      |+++|++. ++|.+.+..  .+++..+..++.|++.||
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL  157 (371)
T 4exu_A           81 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGL  157 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHH
Confidence            455667889999999999999999999999877654      99999997 488777643  489999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||+|+|||++.++.+|++|||++.
T Consensus       158 ~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  192 (371)
T 4exu_A          158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR  192 (371)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred             HHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence            9999999999 999999999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.88  E-value=3.1e-22  Score=136.71  Aligned_cols=105  Identities=26%  Similarity=0.407  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ....+.+.+|+.+++.++||||+++++.+.  +..++++||+++++|.+++....   .++...+..++.|++.|+.|+|
T Consensus        42 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH  119 (307)
T 2eva_A           42 ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH  119 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence            345677899999999999999999999876  34789999999999999998654   3788889999999999999999


Q ss_pred             h---ccccc-cccccceEEecCCe-eeccceeeee
Q psy2929          87 S---LMSVN-QHKPRYIAWKVGSI-LAGGKLYFIE  116 (131)
Q Consensus        87 ~---~~~~h-dlk~~nili~~~~~-~kl~df~~~~  116 (131)
                      +   +|++| ||+|+||+++.++. +|++|||++.
T Consensus       120 ~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A          120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC  154 (307)
T ss_dssp             TCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred             hCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence            9   89999 99999999998876 7999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.87  E-value=2.1e-22  Score=140.03  Aligned_cols=106  Identities=21%  Similarity=0.271  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~   83 (131)
                      ....+.+.+|+.+++.++||||+++++++...     ...|+++|++. +++.+.+.... .+++..+..++.|++.||.
T Consensus        70 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~  148 (362)
T 3pg1_A           70 SFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLH  148 (362)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence            34557899999999999999999999998543     35799999997 58888887543 6899999999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++|++| ||+|+||+++.++.+|++|||++.
T Consensus       149 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  182 (362)
T 3pg1_A          149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAR  182 (362)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTCCEEECCTTC--
T ss_pred             HHHHCcCEecCCChHHEEEcCCCCEEEEecCccc
Confidence            999999999 999999999999999999999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.87  E-value=8.8e-22  Score=135.24  Aligned_cols=114  Identities=17%  Similarity=0.230  Sum_probs=96.5

Q ss_pred             ccccccccHHHHHHHHHHHH-HHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-----ccCCCHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVD-NLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----CVKLSEETCKCIV   75 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~   75 (131)
                      |++...........+.+|.. +++.++||||+++++++...+..++++|++.+ ++.+++..     ...+++..+..++
T Consensus        53 K~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~  131 (327)
T 3aln_A           53 KRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKIT  131 (327)
T ss_dssp             EEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred             EEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHH
Confidence            44443334455555666666 67778999999999999999999999999975 88887763     4468999999999


Q ss_pred             HHHHHHHHHHHhc-cccc-cccccceEEecCCeeeccceeeee
Q psy2929          76 YQIAMALQYLHSL-MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        76 ~~~~~~l~~lh~~-~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|++.|+.|+|++ |++| ||+|+||+++.++.+|++|||++.
T Consensus       132 ~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A          132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             HHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             HHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999999999999 9999 999999999999999999999764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.87  E-value=8.2e-22  Score=134.06  Aligned_cols=103  Identities=24%  Similarity=0.359  Sum_probs=92.6

Q ss_pred             HHHHHHHHHH-HcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNL-KSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~l-~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+|+.++ +..+||||+++++.+..    ....++++||+++++|.+++....  .+++..+..++.|++.||.|+|
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  134 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3567788887 56689999999999987    667899999999999999998764  5899999999999999999999


Q ss_pred             hccccc-cccccceEEec---CCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++.   ++.++++|||++.
T Consensus       135 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A          135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            999999 99999999998   7889999999764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.87  E-value=3.1e-22  Score=148.64  Aligned_cols=115  Identities=28%  Similarity=0.412  Sum_probs=101.1

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe------CCeeEEeeeccCCCChHHHHHhcc---CCCHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW------KDNIYMFLEYVQGGDLKSKIEACV---KLSEETCK   72 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~   72 (131)
                      |++.........+.+.+|+.+++.++||||+++++++..      .+..|+++||+++++|.+++....   .+++..+.
T Consensus        45 Kvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~  124 (676)
T 3qa8_A           45 KQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR  124 (676)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHH
T ss_pred             EEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHH
Confidence            555444566778889999999999999999999998755      567899999999999999998754   58889999


Q ss_pred             HHHHHHHHHHHHHHhccccc-cccccceEEecCCe---eeccceeeee
Q psy2929          73 CIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSI---LAGGKLYFIE  116 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~---~kl~df~~~~  116 (131)
                      .++.|++.|+.|+|+.|++| ||+|+||+++.++.   ++++|||++.
T Consensus       125 ~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A          125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             HHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence            99999999999999999999 99999999997765   8999999875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.87  E-value=9.2e-22  Score=134.18  Aligned_cols=102  Identities=25%  Similarity=0.341  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHcC---CCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccC--CCHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSL---SHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVK--LSEETCKCIVYQIAMALQ   83 (131)
Q Consensus        14 ~~~~~e~~~l~~~---~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~   83 (131)
                      ..+.+|+.+++.+   +||||+++++.+....     ..++++|++. ++|.+++.....  +++..+..++.|++.||.
T Consensus        56 ~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~  134 (308)
T 3g33_A           56 ISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD  134 (308)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence            3566677777666   5999999999998765     4799999996 599999987653  899999999999999999


Q ss_pred             HHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |+|++|++| ||||+||+++.++.+|++|||++.
T Consensus       135 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  168 (308)
T 3g33_A          135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLAR  168 (308)
T ss_dssp             HHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred             HHHHCCcccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence            999999999 999999999999999999999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.87  E-value=6.9e-22  Score=134.36  Aligned_cols=105  Identities=24%  Similarity=0.376  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEE--eCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVL--WKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~--~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ...+.+.+|+.+++.++||||+++++.+.  .....|+++||++++ +.+.+...  ..++...+..++.|++.||.|+|
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            35677999999999999999999999985  445789999999875 77777653  36899999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++.++.++++|||++.
T Consensus       127 ~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C          127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence            999999 999999999999999999998764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=1e-21  Score=134.77  Aligned_cols=105  Identities=20%  Similarity=0.278  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEe------CCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLW------KDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l   82 (131)
                      ..+.+.+|+.+++.+ +||||+++++.+..      .+..|+++||+++++|.+++...  ..+++..+..++.|++.||
T Consensus        63 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  142 (326)
T 2x7f_A           63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  142 (326)
T ss_dssp             TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            346788999999998 79999999999987      45789999999999999999864  3689999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+|++|++| ||+|+||+++.++.++++|||++.
T Consensus       143 ~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             HHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             HHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence            9999999999 999999999999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.87  E-value=3.8e-22  Score=140.91  Aligned_cols=102  Identities=24%  Similarity=0.383  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHhcc---------CCCHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEACV---------KLSEETCKCIVYQIAMAL   82 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~l   82 (131)
                      +.+.+|+.+++.++||||+++++++..  ....|+++||+.+ ++.+++....         .+++..++.++.|++.||
T Consensus        63 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  141 (405)
T 3rgf_A           63 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  141 (405)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            467899999999999999999999965  5678999999965 8888876322         388999999999999999


Q ss_pred             HHHHhccccc-cccccceEE----ecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAW----KVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili----~~~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||||+|||+    +..+.+||+|||++.
T Consensus       142 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  180 (405)
T 3rgf_A          142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  180 (405)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred             HHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence            9999999999 999999999    677899999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.87  E-value=2.9e-22  Score=139.08  Aligned_cols=102  Identities=18%  Similarity=0.162  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHcCCCCCcee---------------EEEEEEe-CCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNIVT---------------LYESVLW-KDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV   75 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~---------------l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~   75 (131)
                      +.+.+|+.+++.++||||++               +++.+.. ....|++|||+ +++|.+++...  ..+++..+..++
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            45788999999999999887               6677766 67889999999 88999999875  579999999999


Q ss_pred             HHHHHHHHHHHhccccc-cccccceEEecCC--eeeccceeeee
Q psy2929          76 YQIAMALQYLHSLMSVN-QHKPRYIAWKVGS--ILAGGKLYFIE  116 (131)
Q Consensus        76 ~~~~~~l~~lh~~~~~h-dlk~~nili~~~~--~~kl~df~~~~  116 (131)
                      .|++.||.|||++|++| ||+|+|||++.++  .+|++|||++.
T Consensus       166 ~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~  209 (352)
T 2jii_A          166 CRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF  209 (352)
T ss_dssp             HHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCB
T ss_pred             HHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCccee
Confidence            99999999999999999 9999999999998  89999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.87  E-value=3.1e-22  Score=139.84  Aligned_cols=106  Identities=12%  Similarity=0.034  Sum_probs=76.9

Q ss_pred             cHHHHHHHHHHHH---HHHcCCCCCceeEE-------EEEEeC-----------------CeeEEeeeccCCCChHHHHH
Q psy2929           9 DKENRKYFANEVD---NLKSLSHPNIVTLY-------ESVLWK-----------------DNIYMFLEYVQGGDLKSKIE   61 (131)
Q Consensus         9 ~~~~~~~~~~e~~---~l~~~~h~~iv~l~-------~~~~~~-----------------~~~~lv~e~~~~~~l~~~~~   61 (131)
                      +....+.+.+|+.   .++. +||||++++       +.+..+                 ...|+||||++ ++|.+++.
T Consensus       102 ~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  179 (371)
T 3q60_A          102 SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFS  179 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHH
Confidence            3456667788854   5555 799988765       444433                 23799999998 79999998


Q ss_pred             hcc-CCCHHHH------HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          62 ACV-KLSEETC------KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        62 ~~~-~~~~~~~------~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ..+ .+.....      ..++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       180 ~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~  242 (371)
T 3q60_A          180 TLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW  242 (371)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEE
T ss_pred             HhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceee
Confidence            643 3444444      567799999999999999999 999999999999999999999875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.87  E-value=1.4e-21  Score=133.31  Aligned_cols=106  Identities=26%  Similarity=0.412  Sum_probs=93.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEE--------------eCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVL--------------WKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI   74 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~--------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   74 (131)
                      +....+.+.+|+.+++.++||||+++++.+.              .....|+++||+. ++|.+++.. +.+++..+..+
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~  125 (320)
T 2i6l_A           48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLF  125 (320)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHH
Confidence            4556778899999999999999999999873              3457899999997 599998865 47889999999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEe-cCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      +.|++.||.|+|++|++| ||+|+||+++ .++.+|++|||++.
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A          126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence            999999999999999999 9999999997 56799999999764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=1.1e-21  Score=137.59  Aligned_cols=100  Identities=21%  Similarity=0.285  Sum_probs=87.5

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeC--------------------------------------CeeEEeeeccCCCChH
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWK--------------------------------------DNIYMFLEYVQGGDLK   57 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~--------------------------------------~~~~lv~e~~~~~~l~   57 (131)
                      ..+|+.+++.++||||+++++++...                                      ...++||||+++ +|.
T Consensus        47 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~  125 (383)
T 3eb0_A           47 KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLH  125 (383)
T ss_dssp             CCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHH
T ss_pred             HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHH
Confidence            34799999999999999999998543                                      348899999975 877


Q ss_pred             HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEe-cCCeeeccceeeee
Q psy2929          58 SKIEA----CVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        58 ~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      +.+..    ...+++..+..++.|++.||.|||++|++| ||||+||+++ .++.+|++|||++.
T Consensus       126 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~  190 (383)
T 3eb0_A          126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK  190 (383)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCE
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCc
Confidence            76653    346899999999999999999999999999 9999999998 68999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=3.8e-21  Score=130.26  Aligned_cols=103  Identities=17%  Similarity=0.145  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.+ +|++++.+++.+......++++|++ +++|.+++...+ .+++..+..++.|++.||.|+|++|+
T Consensus        49 ~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  127 (298)
T 1csn_A           49 APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL  127 (298)
T ss_dssp             SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            34578899999999 7999999999999999999999999 889999998754 59999999999999999999999999


Q ss_pred             cc-cccccceEEecCCe-----eeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSI-----LAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~-----~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.     +|++|||++.
T Consensus       128 vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A          128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             ecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence            99 99999999987776     9999999875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.87  E-value=2.3e-21  Score=138.09  Aligned_cols=118  Identities=19%  Similarity=0.156  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHcC------CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSL------SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMA   81 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~------~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (131)
                      ....+.+.+|+.+++.+      +|+||+.+++.+......++++|++. ++|.+++....  .+++..+..++.|++.|
T Consensus       134 ~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~a  212 (429)
T 3kvw_A          134 KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQC  212 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence            34456677888888766      67899999999999999999999995 59999988754  48999999999999999


Q ss_pred             HHHHHhccccc-cccccceEEecCCe--eeccceeeeecc-ccccCCCCCC
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKVGSI--LAGGKLYFIENR-QVRSGNVNGP  128 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~~~~--~kl~df~~~~~~-~~~~~~~gtp  128 (131)
                      |.|||++|++| ||||+|||++.++.  +|++|||++... .......|||
T Consensus       213 L~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~  263 (429)
T 3kvw_A          213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSR  263 (429)
T ss_dssp             HHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCG
T ss_pred             HHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCC
Confidence            99999999999 99999999999887  999999987432 2223344554

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.87  E-value=1.2e-21  Score=138.19  Aligned_cols=99  Identities=20%  Similarity=0.259  Sum_probs=85.6

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHH----hccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIE----ACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      .+|+.+++.++||||+++++++....      ..++++||+++ ++...+.    ....++...++.++.|++.||.|||
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  158 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH  158 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999996544      37899999977 4444333    2346899999999999999999999


Q ss_pred             hccccc-cccccceEEe-cCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      ++|++| ||||+|||++ .++.+|++|||++.
T Consensus       159 ~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~  190 (394)
T 4e7w_A          159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK  190 (394)
T ss_dssp             HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence            999999 9999999999 78999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.87  E-value=2.2e-22  Score=137.35  Aligned_cols=104  Identities=21%  Similarity=0.148  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHcC----CCCCceeEEEEEEeCCeeEEeeec-cCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          13 RKYFANEVDNLKSL----SHPNIVTLYESVLWKDNIYMFLEY-VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        13 ~~~~~~e~~~l~~~----~h~~iv~l~~~~~~~~~~~lv~e~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+|+.+++.+    +||||+++++++...+..++++|+ +.+++|.+++...+.+++..+..++.|++.||.|+|+
T Consensus        78 ~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~  157 (312)
T 2iwi_A           78 SVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS  157 (312)
T ss_dssp             -CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34456788888888    899999999999999999999999 7888999999988789999999999999999999999


Q ss_pred             ccccc-cccccceEEe-cCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      +|++| ||+|+||+++ .++.++++|||++.
T Consensus       158 ~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~  188 (312)
T 2iwi_A          158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGA  188 (312)
T ss_dssp             HTEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred             CCeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence            99999 9999999999 78999999999764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.86  E-value=8.9e-22  Score=134.92  Aligned_cols=101  Identities=25%  Similarity=0.376  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHcC---CCCCceeEEEEEE-----eCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHH
Q psy2929          15 YFANEVDNLKSL---SHPNIVTLYESVL-----WKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        15 ~~~~e~~~l~~~---~h~~iv~l~~~~~-----~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~   84 (131)
                      .+.+|+.+++.+   +||||+++++.+.     .....++++|++. ++|.+++....  .+++..+..++.|++.||.|
T Consensus        57 ~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~  135 (326)
T 1blx_A           57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF  135 (326)
T ss_dssp             THHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            456677776655   8999999999987     4456899999997 59999998754  48999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +|++|++| ||+|+||+++.++.++++|||++.
T Consensus       136 lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A          136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             HHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            99999999 999999999999999999999874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.86  E-value=9e-22  Score=135.49  Aligned_cols=102  Identities=16%  Similarity=0.163  Sum_probs=86.0

Q ss_pred             HHHHHHHHH--HHcCCCCCceeEEEEEEe-----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDN--LKSLSHPNIVTLYESVLW-----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~--l~~~~h~~iv~l~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +.+..|.++  ++.++||||+++++.+..     ....+++|||+++|+|.+++... ..+......++.|++.||.|||
T Consensus        50 ~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH  128 (336)
T 3g2f_A           50 QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLH  128 (336)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHH
Confidence            344444444  445799999999986643     23578999999999999999765 4588888999999999999999


Q ss_pred             hc---------cccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SL---------MSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~---------~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.         |++| ||||+|||++.++.+|++|||++.
T Consensus       129 ~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A          129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM  168 (336)
T ss_dssp             CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred             hhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence            99         9999 999999999999999999999874

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.86  E-value=4.1e-22  Score=138.33  Aligned_cols=105  Identities=26%  Similarity=0.328  Sum_probs=93.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe------eEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN------IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL   82 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~------~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (131)
                      +....+.+.+|+.+++.++||||+++++++...+.      .|+++|++. ++|.+.+..  .+++..+..++.|++.||
T Consensus        63 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al  139 (353)
T 3coi_A           63 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGL  139 (353)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence            44566778999999999999999999999987654      499999997 488877643  589999999999999999


Q ss_pred             HHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          83 QYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        83 ~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|||++|++| ||+|+||+++.++.+|++|||++.
T Consensus       140 ~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             HHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             HHHHHCCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence            9999999999 999999999999999999999764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=2.2e-21  Score=133.20  Aligned_cols=106  Identities=17%  Similarity=0.174  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCC------CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHP------NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMA   81 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~------~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (131)
                      ....+.+.+|+.+++.++|+      +++++++++...+..++++|++ ++++.+++...+  .++...+..++.|++.|
T Consensus        52 ~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~  130 (339)
T 1z57_A           52 DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS  130 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence            34567788999999888655      4999999999999999999999 789999998765  58899999999999999


Q ss_pred             HHHHHhccccc-cccccceEEec-------------------CCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAWKV-------------------GSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili~~-------------------~~~~kl~df~~~~  116 (131)
                      |.|+|++|++| ||+|+|||++.                   ++.+|++|||++.
T Consensus       131 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  185 (339)
T 1z57_A          131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT  185 (339)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCE
T ss_pred             HHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccc
Confidence            99999999999 99999999987                   5679999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.86  E-value=1.2e-21  Score=134.49  Aligned_cols=107  Identities=22%  Similarity=0.250  Sum_probs=93.9

Q ss_pred             cHHHHHHHHHHHHHHHcCC-CCCceeEEEEEEe--------CCeeEEeeeccCCCChHHHHHh---ccCCCHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS-HPNIVTLYESVLW--------KDNIYMFLEYVQGGDLKSKIEA---CVKLSEETCKCIVY   76 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~--------~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~   76 (131)
                      .....+.+.+|+.+++.+. ||||+++++.+..        ....++++|++. |+|.+++..   .+.+++..++.++.
T Consensus        65 ~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~  143 (337)
T 3ll6_A           65 EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFY  143 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHH
Confidence            4556677899999999996 9999999999953        335799999996 599888865   34699999999999


Q ss_pred             HHHHHHHHHHhcc--ccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLM--SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~--~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|||+.+  ++| ||+|+|||++.++.+|++|||++.
T Consensus       144 qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             HHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             HHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence            9999999999999  999 999999999999999999999764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.86  E-value=2.1e-21  Score=132.64  Aligned_cols=106  Identities=21%  Similarity=0.233  Sum_probs=96.9

Q ss_pred             cHHHHHHHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929           9 DKENRKYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      +....+.+.+|+.+++.++  ||||+++++++...+..++++| ..+++|.+++.....+++..+..++.|++.||.|+|
T Consensus        66 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH  144 (313)
T 3cek_A           66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  144 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4566788999999999996  5999999999999999999999 557799999998888999999999999999999999


Q ss_pred             hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++|++| ||+|+||+++ ++.+|++|||++.
T Consensus       145 ~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~  174 (313)
T 3cek_A          145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  174 (313)
T ss_dssp             HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             HCCceecCCCcccEEEE-CCeEEEeeccccc
Confidence            999999 9999999996 4899999999774

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.86  E-value=3.2e-23  Score=141.76  Aligned_cols=104  Identities=16%  Similarity=0.237  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++.+...+..++++|++++++|.+++...+ .++...+..++.|++.|+.|+|++|+
T Consensus        72 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  151 (319)
T 2y4i_B           72 QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI  151 (319)
T ss_dssp             CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            34557789999999999999999999999999999999999999999998754 68999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++ ++.++++|||++.
T Consensus       152 ~H~dlkp~NIl~~-~~~~~l~Dfg~~~  177 (319)
T 2y4i_B          152 LHKDLKSKNVFYD-NGKVVITDFGLFS  177 (319)
T ss_dssp             CCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred             cccCCChhhEEEe-CCCEEEeecCCcc
Confidence            99 9999999998 6799999999753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.85  E-value=5.8e-21  Score=135.62  Aligned_cols=100  Identities=21%  Similarity=0.219  Sum_probs=85.4

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKCIVYQIAMALQYL   85 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l   85 (131)
                      ..+|+.+++.++||||+++++++...      .+.++++||+++ ++.+.+..    ...++...+..++.|++.||.||
T Consensus        94 ~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  172 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999988642      236799999976 66666542    34689999999999999999999


Q ss_pred             Hhccccc-cccccceEEecC-Ceeeccceeeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVG-SILAGGKLYFIE  116 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~-~~~kl~df~~~~  116 (131)
                      |++|++| ||||+|||++.+ +.+||+|||++.
T Consensus       173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             HTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             HHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            9999999 999999999965 678999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.85  E-value=8.7e-21  Score=130.22  Aligned_cols=103  Identities=20%  Similarity=0.120  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCC-CChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          14 KYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQG-GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      +.+.+|+.+++.++  ||||+++++.+...+..++++|++.+ ++|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  170 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV  170 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            44677899999985  59999999999999999999999975 7999999987789999999999999999999999999


Q ss_pred             cc-cccccceEEe-cCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWK-VGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~-~~~~~kl~df~~~~  116 (131)
                      +| ||+|+|||++ .++.+|++|||++.
T Consensus       171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          171 LHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            99 9999999999 78999999999764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=4e-21  Score=134.61  Aligned_cols=95  Identities=25%  Similarity=0.294  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHcCC--------CCCceeEEEEEE----eCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS--------HPNIVTLYESVL----WKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV   75 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~--------h~~iv~l~~~~~----~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~   75 (131)
                      ....+.+.+|+.+++.++        ||||+++++.+.    .....+++||++ ++++.+.+...  ..++...++.++
T Consensus        74 ~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~  152 (397)
T 1wak_A           74 EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKII  152 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHH
Confidence            445677889999999885        788999999997    445789999999 55777766654  368999999999


Q ss_pred             HHHHHHHHHHHhc-cccc-cccccceEEecCC
Q psy2929          76 YQIAMALQYLHSL-MSVN-QHKPRYIAWKVGS  105 (131)
Q Consensus        76 ~~~~~~l~~lh~~-~~~h-dlk~~nili~~~~  105 (131)
                      .|++.||.|||++ |++| ||||+|||++.++
T Consensus       153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            9999999999998 9999 9999999999776

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.85  E-value=1.4e-20  Score=128.42  Aligned_cols=103  Identities=17%  Similarity=0.172  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhc-cc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSL-MS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~-~~   90 (131)
                      .+.+.++..+++.++||||+++++++...+..++++|++ ++.+..+... ...+++..+..++.|++.||.|+|++ |+
T Consensus        68 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i  146 (318)
T 2dyl_A           68 KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV  146 (318)
T ss_dssp             HHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence            344455556788889999999999999999999999999 5466665554 34789999999999999999999996 99


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||+|+||+++.++.+|++|||++.
T Consensus       147 ~H~dlkp~Nil~~~~~~~kl~dfg~~~  173 (318)
T 2dyl_A          147 IHRDVKPSNILLDERGQIKLCDFGISG  173 (318)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred             EeCCCCHHHEEECCCCCEEEEECCCch
Confidence            99 999999999999999999998764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.85  E-value=3.9e-21  Score=137.01  Aligned_cols=104  Identities=23%  Similarity=0.223  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCC-------CHHHHHHHHHHHHHHHH
Q psy2929          12 NRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL-------SEETCKCIVYQIAMALQ   83 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~l~   83 (131)
                      ..+.+.+|+.+++.+ +||||+++++.+.+++..|+++|++. |+|.+++......       ++..+..++.|++.||.
T Consensus        51 ~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  129 (434)
T 2rio_A           51 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA  129 (434)
T ss_dssp             GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHH
Confidence            345678899999876 89999999999999999999999996 5999999875432       22234679999999999


Q ss_pred             HHHhccccc-cccccceEEecCC-------------eeeccceeeee
Q psy2929          84 YLHSLMSVN-QHKPRYIAWKVGS-------------ILAGGKLYFIE  116 (131)
Q Consensus        84 ~lh~~~~~h-dlk~~nili~~~~-------------~~kl~df~~~~  116 (131)
                      |||++|++| ||||+|||++..+             .+|++|||++.
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~  176 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK  176 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCE
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccce
Confidence            999999999 9999999997654             89999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.85  E-value=1.3e-21  Score=139.56  Aligned_cols=101  Identities=20%  Similarity=0.202  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          15 YFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        15 ~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+|+.+++.+ +||||+++++.+.+....|+++|++. |+|.+++.... .........++.|++.||.|||++|++|
T Consensus        63 ~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  141 (432)
T 3p23_A           63 FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVH  141 (432)
T ss_dssp             ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEe
Confidence            356899999999 79999999999999999999999996 59999998654 3455556789999999999999999999


Q ss_pred             -cccccceEEec---CC--eeeccceeeee
Q psy2929          93 -QHKPRYIAWKV---GS--ILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~---~~--~~kl~df~~~~  116 (131)
                       ||||+|||++.   ++  .+|++|||++.
T Consensus       142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A          142 RDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             CCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             CCCCHHHEEEecCCCCCceeEEEeccccee
Confidence             99999999953   33  46799999875

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.84  E-value=1.5e-20  Score=129.86  Aligned_cols=106  Identities=15%  Similarity=0.209  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCC------ceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLSHPN------IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMA   81 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~------iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (131)
                      ....+.+.+|+.+++.++|++      ++.+++.+...+..+++||++ ++++.+.+....  .++...+..++.|++.|
T Consensus        57 ~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~  135 (355)
T 2eu9_A           57 GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA  135 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence            345677888999999886655      899999999999999999999 557777776543  68999999999999999


Q ss_pred             HHHHHhccccc-cccccceEE-------------------ecCCeeeccceeeee
Q psy2929          82 LQYLHSLMSVN-QHKPRYIAW-------------------KVGSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh~~~~~h-dlk~~nili-------------------~~~~~~kl~df~~~~  116 (131)
                      |.|||++|++| ||||+|||+                   +..+.+|++|||++.
T Consensus       136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  190 (355)
T 2eu9_A          136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT  190 (355)
T ss_dssp             HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCE
T ss_pred             HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccc
Confidence            99999999999 999999999                   667899999999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.84  E-value=4.9e-21  Score=132.89  Aligned_cols=103  Identities=21%  Similarity=0.232  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCe-------eEEeeeccCCCChHHHHH----hccCCCHHHHHHHHHHHHHH
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDN-------IYMFLEYVQGGDLKSKIE----ACVKLSEETCKCIVYQIAMA   81 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~-------~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~   81 (131)
                      .+...+++..++.++||||+++++++...+.       .+++|||+++ ++...+.    ....++...+..++.|++.|
T Consensus        63 ~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  141 (360)
T 3e3p_A           63 RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRS  141 (360)
T ss_dssp             CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence            3456677888888999999999999976433       7899999976 5554443    34468899999999999999


Q ss_pred             HHHHH--hccccc-cccccceEEec-CCeeeccceeeee
Q psy2929          82 LQYLH--SLMSVN-QHKPRYIAWKV-GSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh--~~~~~h-dlk~~nili~~-~~~~kl~df~~~~  116 (131)
                      +.|+|  ++|++| ||||+|||++. ++.+|++|||++.
T Consensus       142 l~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK  180 (360)
T ss_dssp             HHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred             HHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence            99999  999999 99999999997 8999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.84  E-value=1.5e-20  Score=127.10  Aligned_cols=103  Identities=17%  Similarity=0.133  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEE-EeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESV-LWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .+.+.+|+.+++.++|++++..+..+ ...+..++++|++ +++|.+++.. ...+++..+..++.|++.||.|+|++|+
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  126 (296)
T 4hgt_A           48 HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF  126 (296)
T ss_dssp             CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34578899999999877766665544 6677889999999 8899999985 3479999999999999999999999999


Q ss_pred             cc-cccccceEE---ecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||+   +.++.+|++|||++.
T Consensus       127 vH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~  156 (296)
T 4hgt_A          127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             ECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             ecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence            99 999999999   788999999999875

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.83  E-value=2.9e-20  Score=128.49  Aligned_cols=96  Identities=23%  Similarity=0.367  Sum_probs=84.5

Q ss_pred             HHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhccccc-c
Q psy2929          21 DNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLMSVN-Q   93 (131)
Q Consensus        21 ~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~~~h-d   93 (131)
                      ..++.++||||+++++.+..    ....++++||+++++|.+++....  .+++..++.++.|++.||.|||++|++| |
T Consensus        74 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~d  153 (336)
T 3fhr_A           74 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD  153 (336)
T ss_dssp             HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            34567799999999999976    445899999999999999998754  5899999999999999999999999999 9


Q ss_pred             ccccceEEecC---Ceeeccceeeee
Q psy2929          94 HKPRYIAWKVG---SILAGGKLYFIE  116 (131)
Q Consensus        94 lk~~nili~~~---~~~kl~df~~~~  116 (131)
                      |+|+||+++.+   +.+|++|||++.
T Consensus       154 lkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          154 VKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             CSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             CCHHHEEEEecCCCceEEEeccccce
Confidence            99999999864   559999999774

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.83  E-value=2.7e-21  Score=141.16  Aligned_cols=95  Identities=19%  Similarity=0.114  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+++.+|+++++.++||||+.+..++...+..|++|||+++++|.+++..        ...++.|++.+|.|+|+++++
T Consensus       382 ~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIi  453 (540)
T 3en9_A          382 RKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVI  453 (540)
T ss_dssp             HHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCc
Confidence            356689999999999999999655555577778999999999999998776        457999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.  .+|++|||++.
T Consensus       454 HrDiKp~NILl~~--~~kL~DFGla~  477 (540)
T 3en9_A          454 HNDLTTSNFIFDK--DLYIIDFGLGK  477 (540)
T ss_dssp             CTTCCTTSEEESS--SEEECCCTTCE
T ss_pred             cCCCCHHHEEECC--eEEEEECccCE
Confidence            9 99999999998  99999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.83  E-value=9e-20  Score=123.35  Aligned_cols=102  Identities=17%  Similarity=0.107  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHcCCCCCceeEEEE-EEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLSHPNIVTLYES-VLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~iv~l~~~-~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      +.+.+|+.+++.++|++++..+.. ....+..++++|++ +++|.+++.. ...+++..+..++.|++.||.|+|++|++
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  127 (296)
T 3uzp_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  127 (296)
T ss_dssp             CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            458899999999987776555444 46677889999999 8899999984 34699999999999999999999999999


Q ss_pred             c-cccccceEEe---cCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWK---VGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~---~~~~~kl~df~~~~  116 (131)
                      | ||+|+||+++   .++.+|++|||++.
T Consensus       128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A          128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             CSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             eCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            9 9999999994   78899999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.82  E-value=1.9e-19  Score=129.93  Aligned_cols=102  Identities=15%  Similarity=0.098  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHcCCC-CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      +.+.+|+.+++.+.| +++..+..++...+..+++|||+ +++|.+++.. ...+++..++.++.|++.||.|||++|++
T Consensus        47 ~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv  125 (483)
T 3sv0_A           47 PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL  125 (483)
T ss_dssp             CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            347889999999975 66666777777888899999999 8899999985 34799999999999999999999999999


Q ss_pred             c-cccccceEE---ecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAW---KVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili---~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||+   +.++.+||+|||++.
T Consensus       126 HrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A          126 HRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             CCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             ecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            9 999999999   578999999999875

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.82  E-value=3.1e-20  Score=129.33  Aligned_cols=106  Identities=19%  Similarity=0.213  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHcCC-----------CCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhc--cCCCHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-----------HPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEAC--VKLSEETCK   72 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-----------h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~   72 (131)
                      ....+.+.+|+.+++.++           ||||+++++.+...+    ..++++|++ +++|.+++...  ..++...+.
T Consensus        56 ~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~  134 (373)
T 1q8y_A           56 KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVK  134 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHH
T ss_pred             ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHH
Confidence            345667889999998875           789999999998654    689999999 88999999864  358999999


Q ss_pred             HHHHHHHHHHHHHHhc-cccc-cccccceEEec------CCeeeccceeeee
Q psy2929          73 CIVYQIAMALQYLHSL-MSVN-QHKPRYIAWKV------GSILAGGKLYFIE  116 (131)
Q Consensus        73 ~~~~~~~~~l~~lh~~-~~~h-dlk~~nili~~------~~~~kl~df~~~~  116 (131)
                      .++.|++.||.|+|++ |++| ||||+|||++.      .+.+|++|||++.
T Consensus       135 ~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~  186 (373)
T 1q8y_A          135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC  186 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccc
Confidence            9999999999999998 9999 99999999954      3489999999875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.81  E-value=2.3e-19  Score=125.85  Aligned_cols=106  Identities=19%  Similarity=0.169  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHcCC-CC-----CceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-HP-----NIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMA   81 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-h~-----~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (131)
                      ....+.+.+|+.+++.++ |+     +++.+++.+...+..++|||++.+ +|.+++....  .++...+..++.|++.|
T Consensus        91 ~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~a  169 (382)
T 2vx3_A           91 KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTA  169 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHH
Confidence            344566788888888874 55     499999999999999999999964 9999998653  58999999999999999


Q ss_pred             HHHHH--hccccc-cccccceEEec--CCeeeccceeeee
Q psy2929          82 LQYLH--SLMSVN-QHKPRYIAWKV--GSILAGGKLYFIE  116 (131)
Q Consensus        82 l~~lh--~~~~~h-dlk~~nili~~--~~~~kl~df~~~~  116 (131)
                      |.|+|  ..|++| ||||+|||++.  ++.+|++|||++.
T Consensus       170 l~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC  209 (382)
T ss_dssp             HHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             HHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence            99999  479999 99999999954  6789999999875

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.76  E-value=4.7e-19  Score=120.09  Aligned_cols=93  Identities=11%  Similarity=0.049  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ....+.+|+.+++.++|   +.+.+.+.. +..|++|||+++++|.+ +..      .....++.|++.|+.++|+.|++
T Consensus       147 ~~~~~~~E~~~l~~l~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~gii  215 (282)
T 1zar_A          147 AIRSARNEFRALQKLQG---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIV  215 (282)
T ss_dssp             HHHHHHHHHHHHHHTTT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhccC---CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCE
Confidence            45678999999999984   445444433 45699999999999988 321      23456999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      | ||||+|||++ ++.++++|||++.
T Consensus       216 HrDlkp~NILl~-~~~vkl~DFG~a~  240 (282)
T 1zar_A          216 HGDLSQYNVLVS-EEGIWIIDFPQSV  240 (282)
T ss_dssp             CSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred             eCCCCHHHEEEE-CCcEEEEECCCCe
Confidence            9 9999999999 9999999999774

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.69  E-value=3.8e-17  Score=115.82  Aligned_cols=104  Identities=16%  Similarity=0.056  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHcCCC-CCc---------------------eeEEEEEEe-----CCeeEEeeeccCCCChHHHHHhc-
Q psy2929          12 NRKYFANEVDNLKSLSH-PNI---------------------VTLYESVLW-----KDNIYMFLEYVQGGDLKSKIEAC-   63 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h-~~i---------------------v~l~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~-   63 (131)
                      ..+.+.+|+.+++.+.| ++.                     ..+...+..     ....+++++.. +++|.+++... 
T Consensus       121 ~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~  199 (413)
T 3dzo_A          121 AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL  199 (413)
T ss_dssp             CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhh
Confidence            46678999999999976 211                     111111111     12356677765 66999988521 


Q ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          64 ------VKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        64 ------~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                            ..+++.....++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       200 ~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~  259 (413)
T 3dzo_A          200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV  259 (413)
T ss_dssp             HHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred             cccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecccee
Confidence                  13666788888999999999999999999 999999999999999999999864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.60  E-value=3.3e-16  Score=104.77  Aligned_cols=94  Identities=13%  Similarity=0.058  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHcCCCCCc--eeEEEEEEeCCeeEEeeeccCC-C----ChHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSLSHPNI--VTLYESVLWKDNIYMFLEYVQG-G----DLKSKIEACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~i--v~l~~~~~~~~~~~lv~e~~~~-~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+|..+++.+.|+++  +..++.    +..++||||+.+ |    +|.+....   .++.....++.|++.++.++|
T Consensus       115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHH
Confidence            467899999999977653  344432    346899999942 3    56655332   224456789999999999999


Q ss_pred             -hccccc-cccccceEEecCCeeeccceeeee
Q psy2929          87 -SLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        87 -~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       +.|++| |+||+|||++.  .++++|||++.
T Consensus       188 ~~~givHrDlkp~NILl~~--~~~liDFG~a~  217 (258)
T 1zth_A          188 QEAELVHADLSEYNIMYID--KVYFIDMGQAV  217 (258)
T ss_dssp             HTSCEECSSCSTTSEEESS--SEEECCCTTCE
T ss_pred             HHCCEEeCCCCHHHEEEcC--cEEEEECcccc
Confidence             999999 99999999998  89999999774

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.32  E-value=1.1e-12  Score=92.24  Aligned_cols=89  Identities=7%  Similarity=-0.079  Sum_probs=63.8

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-ccc
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHK   95 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk   95 (131)
                      .+|...|..+.+.++....-....  ..++||||++|+++..+..      .+....+..|++.++.++|.+|++| |||
T Consensus       161 ~kE~~nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLK  232 (397)
T 4gyi_A          161 IKEFAFMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFN  232 (397)
T ss_dssp             HHHHHHHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             HHHHHHHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            467777777754443222211122  3479999999888765422      1234567899999999999999999 999


Q ss_pred             ccceEEecCC----------eeecccee
Q psy2929          96 PRYIAWKVGS----------ILAGGKLY  113 (131)
Q Consensus        96 ~~nili~~~~----------~~kl~df~  113 (131)
                      |.|||++.++          .+.++||+
T Consensus       233 p~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          233 EFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             TTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             HHHEEEeCCCCcccccccccceEEEEeC
Confidence            9999999887          37788884

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.12  E-value=2.7e-10  Score=75.75  Aligned_cols=97  Identities=15%  Similarity=0.033  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-----
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-----   87 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-----   87 (131)
                      ..+.+|..+++.+. +..++++++.+...+..|++||+++|.++.+...     +......++.++..++..+|+     
T Consensus        54 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~  128 (263)
T 3tm0_A           54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISD  128 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCccc
Confidence            45888999999884 6788899999988889999999999988876521     112233577788888888998     


Q ss_pred             ------------------------------------------------------ccccc-cccccceEEecCCeeeccce
Q psy2929          88 ------------------------------------------------------LMSVN-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        88 ------------------------------------------------------~~~~h-dlk~~nili~~~~~~kl~df  112 (131)
                                                                            ..++| |++|.||+++.++.+.+.||
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDw  208 (263)
T 3tm0_A          129 CPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDL  208 (263)
T ss_dssp             CSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCC
T ss_pred             CCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEc
Confidence                                                                  45899 99999999987666679999


Q ss_pred             eee
Q psy2929         113 YFI  115 (131)
Q Consensus       113 ~~~  115 (131)
                      +.+
T Consensus       209 e~a  211 (263)
T 3tm0_A          209 GRS  211 (263)
T ss_dssp             TTC
T ss_pred             hhc
Confidence            543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.91  E-value=1.7e-09  Score=71.41  Aligned_cols=94  Identities=19%  Similarity=0.139  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHcCCCCC--ceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---
Q psy2929          14 KYFANEVDNLKSLSHPN--IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL---   88 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~--iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~---   88 (131)
                      ..+.+|..+++.+.+.+  ++++++.....+..|++||+++|.++.  ..   ....   ..++.++...+..+|+.   
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~---~~~~---~~~~~~l~~~l~~lh~~~~~  129 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS---HLAP---AEKVSIMADAMRRLHTLDPA  129 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS---CCCH---HHHHHHHHHHHHHHTTSCGG
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC---cCCH---hHHHHHHHHHHHHHhCCCCC
Confidence            45778898888885333  667888887777889999999997773  11   1111   13445555555555543   


Q ss_pred             -------------------------------------------------------cccc-cccccceEEecCCeeeccce
Q psy2929          89 -------------------------------------------------------MSVN-QHKPRYIAWKVGSILAGGKL  112 (131)
Q Consensus        89 -------------------------------------------------------~~~h-dlk~~nili~~~~~~kl~df  112 (131)
                                                                             .++| |++|.||+++.++.+.+.||
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~  209 (264)
T 1nd4_A          130 TCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDC  209 (264)
T ss_dssp             GCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCC
T ss_pred             CCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcc
Confidence                                                                   2999 99999999987766779999


Q ss_pred             eee
Q psy2929         113 YFI  115 (131)
Q Consensus       113 ~~~  115 (131)
                      +.+
T Consensus       210 ~~a  212 (264)
T 1nd4_A          210 GRL  212 (264)
T ss_dssp             TTC
T ss_pred             hhc
Confidence            654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.89  E-value=4.3e-09  Score=73.06  Aligned_cols=101  Identities=13%  Similarity=0.148  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHcCC--CCCceeEEEEEEeC---CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          13 RKYFANEVDNLKSLS--HPNIVTLYESVLWK---DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~--h~~iv~l~~~~~~~---~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+|..+++.+.  +..+++++..+.+.   +..|++||+++|.++.+.  ....+++.....+..++...|..+|+
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhC
Confidence            346788999999886  45688888887766   457999999998776431  11235677777888888999999986


Q ss_pred             ----------------------------------------------------------ccccc-cccccceEEecCCe--
Q psy2929          88 ----------------------------------------------------------LMSVN-QHKPRYIAWKVGSI--  106 (131)
Q Consensus        88 ----------------------------------------------------------~~~~h-dlk~~nili~~~~~--  106 (131)
                                                                                ..++| |++|.||+++.++.  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v  237 (359)
T 3dxp_A          158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV  237 (359)
T ss_dssp             SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred             CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence                                                                      36899 99999999997653  


Q ss_pred             eeccceeee
Q psy2929         107 LAGGKLYFI  115 (131)
Q Consensus       107 ~kl~df~~~  115 (131)
                      +.+.||+.+
T Consensus       238 ~~viDwe~a  246 (359)
T 3dxp_A          238 LAVLDWELS  246 (359)
T ss_dssp             EEECCCTTC
T ss_pred             EEEECcccc
Confidence            589998543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.39  E-value=1.7e-06  Score=58.72  Aligned_cols=103  Identities=16%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHcC-CCC--CceeEEEEEEeCC---eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q psy2929          11 ENRKYFANEVDNLKSL-SHP--NIVTLYESVLWKD---NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~-~h~--~iv~l~~~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      .....+.+|..+++.+ .+.  .++..........   ..|++|++++|.++......  .++......++.++...+..
T Consensus        52 ~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~--~l~~~~~~~~~~~l~~~la~  129 (304)
T 3sg8_A           52 RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLN--NLPKQSQNQAAKDLARFLSE  129 (304)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHH--TSCHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccc--cCCHHHHHHHHHHHHHHHHH
Confidence            4456788999999877 332  2445554443333   34889999999877653222  34555555566666666665


Q ss_pred             HHh----------------------------------------------------------ccccc-cccccceEEec--
Q psy2929          85 LHS----------------------------------------------------------LMSVN-QHKPRYIAWKV--  103 (131)
Q Consensus        85 lh~----------------------------------------------------------~~~~h-dlk~~nili~~--  103 (131)
                      +|+                                                          ..++| |++|.||+++.  
T Consensus       130 LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~  209 (304)
T 3sg8_A          130 LHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK  209 (304)
T ss_dssp             HHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT
T ss_pred             HHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC
Confidence            554                                                          14699 99999999998  


Q ss_pred             CCeeeccceeee
Q psy2929         104 GSILAGGKLYFI  115 (131)
Q Consensus       104 ~~~~kl~df~~~  115 (131)
                      .+.+.+.||+.+
T Consensus       210 ~~~~~~iD~~~~  221 (304)
T 3sg8_A          210 NTICGIIDFGDA  221 (304)
T ss_dssp             TEEEEECCCTTC
T ss_pred             CCEEEEEeCCCC
Confidence            566789999644

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.27  E-value=1.4e-05  Score=54.44  Aligned_cols=49  Identities=20%  Similarity=0.084  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCC---CceeEEEEEE-eCCeeEEeeeccCCCChHH
Q psy2929          10 KENRKYFANEVDNLKSLSHP---NIVTLYESVL-WKDNIYMFLEYVQGGDLKS   58 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~---~iv~l~~~~~-~~~~~~lv~e~~~~~~l~~   58 (131)
                      ......+.+|..+|+.+.+.   .++....... ..+..|++|++++|.++..
T Consensus        50 ~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           50 QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            34556789999999988531   3566666553 3455789999999877765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.23  E-value=1.2e-05  Score=53.33  Aligned_cols=52  Identities=13%  Similarity=0.144  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE   61 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~   61 (131)
                      ......+.+|...|+.+. +-.+++++..+.+.+..|++||+++|.++.+...
T Consensus        60 ~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~  112 (272)
T 4gkh_A           60 GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLE  112 (272)
T ss_dssp             THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHH
T ss_pred             CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccccc
Confidence            334556888999998774 4457788888888899999999999877766543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.47  E-value=0.00021  Score=49.28  Aligned_cols=43  Identities=7%  Similarity=0.101  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHcCC-C--CCceeEEEEEEeC---CeeEEeeeccCCCCh
Q psy2929          14 KYFANEVDNLKSLS-H--PNIVTLYESVLWK---DNIYMFLEYVQGGDL   56 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h--~~iv~l~~~~~~~---~~~~lv~e~~~~~~l   56 (131)
                      ..+.+|..+++.+. +  ..+++++....+.   +..|++||+++|.++
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCC
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCCh
Confidence            34677888888773 2  3567777776554   346899999988654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.20  E-value=0.012  Score=39.50  Aligned_cols=24  Identities=4%  Similarity=-0.158  Sum_probs=20.4

Q ss_pred             cccc-cccccceEEecCCeeecccee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      .++| |+.|.||+ ..++.+.+.||.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e  198 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWE  198 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCT
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecc
Confidence            5799 99999999 666778999984

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.86  E-value=0.0099  Score=40.31  Aligned_cols=28  Identities=4%  Similarity=-0.269  Sum_probs=24.4

Q ss_pred             ccccc-cccccceEEecCCeeeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      ..++| |+.+.||+++.++.+.+.||..+
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            47899 99999999988888999999543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.61  E-value=0.04  Score=38.46  Aligned_cols=25  Identities=4%  Similarity=-0.346  Sum_probs=21.1

Q ss_pred             ccccc-cccccceEEecCCeeecccee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      ..++| |+.|.||+++.+ .+.+.||.
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e  252 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPE  252 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCT
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCc
Confidence            47899 999999999865 47889983

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.68  E-value=0.028  Score=39.69  Aligned_cols=29  Identities=7%  Similarity=-0.106  Sum_probs=24.1

Q ss_pred             Hhccccc-cccccceEEecCCeeeccceeee
Q psy2929          86 HSLMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        86 h~~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +...++| |+.|.||+++.++ +.+.||+.+
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a  259 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS  259 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence            3468899 9999999998776 899999543

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.02  E-value=0.36  Score=32.86  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHcCC---CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLS---HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+|...|+.+.   ...+++.+......+..|++||++++.++..              ....++...|..+|..
T Consensus        71 ~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~--------------~~~~~lG~~LA~LH~~  136 (312)
T 3jr1_A           71 YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQ--------------SSFTIFAEKIAQLHQI  136 (312)
T ss_dssp             GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCCT--------------THHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCCc--------------hhHHHHHHHHHHHHcC
Confidence            4566888988888773   3678888888877788999999999865421              2345667778888875


Q ss_pred             c
Q psy2929          89 M   89 (131)
Q Consensus        89 ~   89 (131)
                      +
T Consensus       137 ~  137 (312)
T 3jr1_A          137 Q  137 (312)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=92.71  E-value=0.038  Score=37.30  Aligned_cols=27  Identities=7%  Similarity=0.018  Sum_probs=22.7

Q ss_pred             ccccc-cccccceEEecCCeeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      .+++| |+.+.||+++.++.+-+.||..
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~  214 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYF  214 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTT
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchh
Confidence            37899 9999999998876667999853

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=90.12  E-value=0.096  Score=35.57  Aligned_cols=27  Identities=7%  Similarity=0.108  Sum_probs=22.7

Q ss_pred             ccccc-cccccceEEecC----Ceeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVG----SILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~----~~~kl~df~~  114 (131)
                      ..++| |+.+.||+++.+    +.+.+.||..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~  214 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQD  214 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCC
Confidence            47899 999999999874    6788999854

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=89.68  E-value=0.39  Score=32.32  Aligned_cols=25  Identities=12%  Similarity=0.089  Sum_probs=20.8

Q ss_pred             ccccc-cccccceEEecCCeeeccceee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYF  114 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~  114 (131)
                      ..++| |+++.||+++ + .+.+.||..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~  220 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDD  220 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTT
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCC
Confidence            36799 9999999998 4 788899843

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=89.25  E-value=0.32  Score=33.33  Aligned_cols=26  Identities=0%  Similarity=-0.252  Sum_probs=23.1

Q ss_pred             ccccc-cccccceEEecCCeeecccee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      ..++| |+.+.|++++.++.+.+.||.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e  232 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWD  232 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCS
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECC
Confidence            37899 999999999988889999984

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.83  E-value=0.17  Score=34.90  Aligned_cols=24  Identities=8%  Similarity=-0.140  Sum_probs=19.9

Q ss_pred             cccc-cccccceEEecCCeeecccee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      .++| |+.+.||+++.++ +.+.||.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e  237 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFE  237 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCT
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEec
Confidence            6899 9999999997654 7899983

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=88.04  E-value=0.19  Score=35.72  Aligned_cols=37  Identities=19%  Similarity=0.071  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCC
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGG   54 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~   54 (131)
                      +.+.+|..+++.+. +.-.+++++.+.  +  .++++|++|.
T Consensus       120 ~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~l~G~  157 (429)
T 1nw1_A          120 SHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEYIPSR  157 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECCCCEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEEeCCc
Confidence            44567888888773 322356665542  2  2788988763

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=87.90  E-value=1.7  Score=28.09  Aligned_cols=81  Identities=7%  Similarity=0.074  Sum_probs=52.5

Q ss_pred             CCCCceeEEEEEEeCCeeEEeeeccCCC-ChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecC
Q psy2929          27 SHPNIVTLYESVLWKDNIYMFLEYVQGG-DLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVG  104 (131)
Q Consensus        27 ~h~~iv~l~~~~~~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~  104 (131)
                      .+|+++.. ..-...+...+.++.-+.+ ++.. +.   ..+...-+.++.+++....  |...-+| -+.|+|++++.+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik---~~~~~eKlr~l~ni~~l~~--~~~~r~tf~L~P~NL~f~~~  115 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK---SFTKNEKLRYLLNIKNLEE--VNRTRYTFVLAPDELFFTRD  115 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG---GSCHHHHHHHHHHGGGGGG--GGGSSEECCCSGGGEEECTT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH---hcCHHHHHHHHHHHHHHHH--HhcCceEEEEecceEEEcCC
Confidence            57888776 4556667666666654422 2222 22   3556666667666655552  3344568 999999999999


Q ss_pred             Ceeeccceee
Q psy2929         105 SILAGGKLYF  114 (131)
Q Consensus       105 ~~~kl~df~~  114 (131)
                      +.+++.=-|+
T Consensus       116 ~~p~i~~RGi  125 (215)
T 4ann_A          116 GLPIAKTRGL  125 (215)
T ss_dssp             SCEEESCCEE
T ss_pred             CCEEEEEccC
Confidence            9988876665

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=87.24  E-value=4.4  Score=26.23  Aligned_cols=83  Identities=10%  Similarity=-0.047  Sum_probs=52.8

Q ss_pred             CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCC
Q psy2929          27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGS  105 (131)
Q Consensus        27 ~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~  105 (131)
                      .||.+  -...-.+++...+.++.-+++.-+..+.   ..+....+.++.++..... -|...-.+ -+.|+|++++.++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~~~  121 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNRAL  121 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECTTC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeCCC
Confidence            46777  3444466777777777554433333332   3556666666666544433 12245678 9999999999999


Q ss_pred             eeeccceeee
Q psy2929         106 ILAGGKLYFI  115 (131)
Q Consensus       106 ~~kl~df~~~  115 (131)
                      .+++.=.|+-
T Consensus       122 ~p~i~hRGi~  131 (219)
T 4ano_A          122 EPFFLHVGVK  131 (219)
T ss_dssp             CEEESCCEET
T ss_pred             cEEEEEcCCc
Confidence            9998777753

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=87.15  E-value=0.28  Score=35.31  Aligned_cols=35  Identities=17%  Similarity=0.113  Sum_probs=22.1

Q ss_pred             HHHHHHHHcCCCCC-ceeEEEEEEeCCeeEEeeeccCCCC
Q psy2929          17 ANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGGD   55 (131)
Q Consensus        17 ~~e~~~l~~~~h~~-iv~l~~~~~~~~~~~lv~e~~~~~~   55 (131)
                      .+|..+++.+...+ .+++++.+  .+  .+++||++|.+
T Consensus       152 ~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~  187 (458)
T 2qg7_A          152 EREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA  187 (458)
T ss_dssp             HHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence            47888888775333 35666665  23  25899998643

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=86.12  E-value=0.36  Score=33.84  Aligned_cols=25  Identities=8%  Similarity=-0.136  Sum_probs=22.2

Q ss_pred             cccc-cccccceEEecC----Ceeecccee
Q psy2929          89 MSVN-QHKPRYIAWKVG----SILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~----~~~kl~df~  113 (131)
                      .++| |+.+.||+++.+    +.+.+.||.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE  250 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFE  250 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCT
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecc
Confidence            7899 999999999876    688999984

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.50  E-value=0.52  Score=33.08  Aligned_cols=25  Identities=8%  Similarity=-0.164  Sum_probs=20.4

Q ss_pred             cccc-cccccceEEe------cCCeeecccee
Q psy2929          89 MSVN-QHKPRYIAWK------VGSILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~------~~~~~kl~df~  113 (131)
                      .++| |+.+.||++.      ..+.+.+.||-
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwE  276 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFE  276 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCT
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechH
Confidence            4689 9999999994      45678999983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	131
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-22
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-19
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-18
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-17
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-15
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-15
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-14
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-13
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-13
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-13
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-04

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 2e-22
 Identities = 17/91 (18%), Positives = 34/91 (37%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            K +   +    R     E+  L   + P IV  Y +      I + +E++ GG L   +
Sbjct: 36  RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 95

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
           +   ++ E+    +   +   L YL     +
Sbjct: 96  KKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.1 bits (210), Expect = 2e-21
 Identities = 24/94 (25%), Positives = 46/94 (48%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K +     +       NE+  L  + HPNIV L +      ++Y+ ++ V GG+L  +I
Sbjct: 39  IKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH 94
                 +E     +++Q+  A++YLH L  V++ 
Sbjct: 99  VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 132

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 1e-20
 Identities = 24/91 (26%), Positives = 41/91 (45%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K V      +  +    E+   K L+H N+V  Y      +  Y+FLEY  GG+L  +I
Sbjct: 35  VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 94

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
           E  + + E   +   +Q+   + YLH +   
Sbjct: 95  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.0 bits (202), Expect = 3e-20
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
                 E  +    EV  L+ L HPN +      L +   ++ +EY  G           
Sbjct: 51  SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK 110

Query: 65  KLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            L E     + +     L YLHS   +++  K   I
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 146

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 82.0 bits (202), Expect = 3e-20
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            K +       ++    NE+  +  L HP ++ L+++   K  + + LE++ GG+L  +I
Sbjct: 59  AKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI 117

Query: 61  EA-CVKLSEETCKCIVYQIAMALQYLHSL 88
            A   K+SE      + Q    L+++H  
Sbjct: 118 AAEDYKMSEAEVINYMRQACEGLKHMHEH 146

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 2e-19
 Identities = 22/87 (25%), Positives = 36/87 (41%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           ++ + +    Y   E D +  L HP  V LY +    + +Y  L Y + G+L   I    
Sbjct: 44  RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103

Query: 65  KLSEETCKCIVYQIAMALQYLHSLMSV 91
              E   +    +I  AL+YLH    +
Sbjct: 104 SFDETCTRFYTAEIVSALEYLHGKGII 130

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 79.0 bits (194), Expect = 5e-19
 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
            K V    + + ++    E+  +  L HP +V L+++    + + M  E++ GG+L  K+
Sbjct: 56  AKFVMTPHESD-KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 114

Query: 61  -EACVKLSEETCKCIVYQIAMALQYLHS 87
            +   K+SE+     + Q+   L ++H 
Sbjct: 115 ADEHNKMSEDEAVEYMRQVCKGLCHMHE 142

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 1e-18
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKL 66
           +   ++     E+  L    H NI+ L+ES    + + M  E++ G D+  +I     +L
Sbjct: 40  VKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFEL 99

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +E      V+Q+  ALQ+LHS
Sbjct: 100 NEREIVSYVHQVCEALQFLHS 120

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.9 bits (189), Expect = 1e-18
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLS 67
            +E  + +  E+D L S  HPNIV L ++  +++N+++ +E+  GG + + + E    L+
Sbjct: 49  SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 108

Query: 68  EETCKCIVYQIAMALQYLHS 87
           E   + +  Q   AL YLH 
Sbjct: 109 ESQIQVVCKQTLDALNYLHD 128

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 3e-18
 Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 7   ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
           A D   +     E + ++ L +P IV +   +   ++  + +E  + G L   ++    +
Sbjct: 46  ANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHV 104

Query: 67  SEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            ++    +V+Q++M ++YL     V++    R +
Sbjct: 105 KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 138

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 4e-18
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
            +  ++   NE+  ++   +PNIV   +S L  D +++ +EY+ GG L   +     + E
Sbjct: 57  QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDE 115

Query: 69  ETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
                +  +   AL++LHS   +++  K   I
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 4e-18
 Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++   +K + +    E   +  L +P IV L   V   + + + +E   GG L   +
Sbjct: 41  IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFL 99

Query: 61  EAC-VKLSEETCKCIVYQIAMALQYLH 86
                ++       +++Q++M ++YL 
Sbjct: 100 VGKREEIPVSNVAELLHQVSMGMKYLE 126

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 4e-18
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
                     EV+    L HPNI+ LY        +Y+ LEY   G +  +++   K  E
Sbjct: 46  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 105

Query: 69  ETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
           +     + ++A AL Y HS   +++  KP  +
Sbjct: 106 QRTATYITELANALSYCHSKRVIHRDIKPENL 137

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.2 bits (184), Expect = 6e-18
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKI 60
             A D      F  E  N  +L+HP IV +Y++   +       Y+ +EYV G  L+  +
Sbjct: 43  DLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHS 87
                ++ +    ++     AL + H 
Sbjct: 103 HTEGPMTPKRAIEVIADACQALNFSHQ 129

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 2e-17
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLK 57
            KE+   ++ +  ++   +EV+ L+ L HPNIV  Y+ ++ + N  +Y+ +EY +GGDL 
Sbjct: 34  WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLA 93

Query: 58  SKIEACVK----LSEETCKCIVYQIAMALQYLHSLMSVNQH 94
           S I    K    L EE    ++ Q+ +AL+  H        
Sbjct: 94  SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 134

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 3e-17
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 5   QNALDKENRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
              L  ++ +    E   L  +  HP +  ++ +   K+N++  +EY+ GGDL   I++C
Sbjct: 38  DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC 97

Query: 64  VKLSEETCKCIVYQIAMALQYLHS 87
            K           +I + LQ+LHS
Sbjct: 98  HKFDLSRATFYAAEIILGLQFLHS 121

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 73.2 bits (179), Expect = 3e-17
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
                    +E R+    EVD L+ +S HPNI+ L ++       ++  + ++ G+L   
Sbjct: 41  GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 100

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +   V LSE+  + I+  +   +  LH L
Sbjct: 101 LTEKVTLSEKETRKIMRALLEVICALHKL 129

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 4e-17
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 6   NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-V 64
            A   +  + F NEV  L+   H NI+           + +  ++ +G  L   +     
Sbjct: 41  TAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIET 99

Query: 65  KLSEETCKCIVYQIAMALQYLH 86
           K        I  Q A  + YLH
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLH 121

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-16
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 1/99 (1%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
              ++       +    E+  L+ LSHPNI+ L ++   K NI +  ++++        +
Sbjct: 33  LGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD 92

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
             + L+    K  +      L+YLH    +++  KP  +
Sbjct: 93  NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL 131

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 1e-16
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKI--EACVK 65
           +    + F  E   +  L H N+V L   ++  K  +Y+  EY+  G L   +       
Sbjct: 40  NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 99

Query: 66  LSEETCKCIVYQIAMALQYLHSLMSV-NQHKPRYI 99
           L  +        +  A++YL     V      R +
Sbjct: 100 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV 134

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 3e-16
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-K 59
           +K  +N      R+ F  E   ++   HP+IV L   V+ ++ +++ +E    G+L+S  
Sbjct: 40  IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL 98

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHS 87
                 L   +     YQ++ AL YL S
Sbjct: 99  QVRKYSLDLASLILYAYQLSTALAYLES 126

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 3e-16
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 1   MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYES----VLWKDNIYMFLEYVQGGD 55
             E+Q+  L K  R+ F  E + LK L HPNIV  Y+S    V  K  I +  E +  G 
Sbjct: 39  WCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGT 98

Query: 56  LKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHK 95
           LK+ ++    +  +  +    QI   LQ+LH+      H+
Sbjct: 99  LKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR 138

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 8e-16
 Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-K 59
           +K +++   ++ R+ F +E   +    HPN++ L   V     + +  E+++ G L S  
Sbjct: 59  IKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 118

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLH 86
            +   + +      ++  IA  ++YL 
Sbjct: 119 RQNDGQFTVIQLVGMLRGIAAGMKYLA 145

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 1e-15
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 25/124 (20%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K ++   D   R+   +E+  +  L SH NIV L  +      IY+  EY   GDL + 
Sbjct: 72  VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY 131

Query: 60  I-----------------------EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-K 95
           +                       E    L+ E   C  YQ+A  +++L     V++   
Sbjct: 132 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 191

Query: 96  PRYI 99
            R +
Sbjct: 192 ARNV 195

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-15
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 19/106 (17%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K ++ +     R+   +E+  L  L  H NIV L  +        +  EY   GDL + 
Sbjct: 58  VKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNF 117

Query: 60  I------------------EACVKLSEETCKCIVYQIAMALQYLHS 87
           +                  +  + L  E      YQ+A  + +L S
Sbjct: 118 LRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 163

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 2e-15
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKL 66
              +   F  E + +K L H  +V LY  V+ ++ IY+  EY++ G L   ++    +KL
Sbjct: 48  GSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           +      +  QIA  + ++  
Sbjct: 107 TINKLLDMAAQIAEGMAFIEE 127

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 3e-15
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLS 67
              +   F  E   + +LSH  +V LY     +  I++  EY+  G L + +     +  
Sbjct: 39  GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 98

Query: 68  EETCKCIVYQIAMALQYLH 86
            +    +   +  A++YL 
Sbjct: 99  TQQLLEMCKDVCEAMEYLE 117

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 3e-15
 Identities = 28/93 (30%), Positives = 47/93 (50%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           +  +++    +R+    EV  LK + HPN++TL+E    K ++ + LE V GG+L   + 
Sbjct: 46  RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA 105

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH 94
               L+EE     + QI   + YLHSL   +  
Sbjct: 106 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFD 138

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 5e-15
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK-IEACVKLS 67
             E    F  EV+ + SL H N++ LY  V+    + M  E    G L  +  +      
Sbjct: 51  QPEAMDDFIREVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFL 109

Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
             T      Q+A  + YL S   +++    R +
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL 142

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 8e-15
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 10  KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN------IYMFLEYVQGG---DLKSKI 60
            +++++   E+  ++ L H NIV L               + + L+YV        +   
Sbjct: 54  LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

Query: 61  EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAW 101
            A   L     K  +YQ+  +L Y+HS    ++  KP+ +  
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.7 bits (162), Expect = 1e-14
 Identities = 15/86 (17%), Positives = 34/86 (39%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
           K ++    +         +  + +   P IV +  +    D +   L+ + GGDL   + 
Sbjct: 40  KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 99

Query: 62  ACVKLSEETCKCIVYQIAMALQYLHS 87
                SE   +    +I + L+++H+
Sbjct: 100 QHGVFSEADMRFYAAEIILGLEHMHN 125

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 1e-14
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 1/96 (1%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           +  + K+   +   E   L++  HP +  L  +    D +   +EY  GG+L   +    
Sbjct: 41  EVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER 100

Query: 65  KLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
             +EE  +    +I  AL+YLHS   V +  K   +
Sbjct: 101 VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 1e-14
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 19/118 (16%)

Query: 1   MKEVQNALDKENRKYFA-----------NEVDNLKSLS-HPNIVTLYE----SVLWKDNI 44
             +V    +K  ++ FA            EV+     S  P+IV + +        +  +
Sbjct: 25  NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84

Query: 45  YMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            + +E + GG+L S+I+       +E     I+  I  A+QYLHS+   ++  KP  +
Sbjct: 85  LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 142

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 2e-14
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 10/97 (10%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K V  A     R  F NE   +K  +  ++V L   V       + +E +  GDLKS +
Sbjct: 55  IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 114

Query: 61  EAC----------VKLSEETCKCIVYQIAMALQYLHS 87
            +              S      +  +IA  + YL++
Sbjct: 115 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA 151

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 4e-14
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLS 67
              + + F  E + +  LSHP +V LY   L +  I +  E+++ G L           +
Sbjct: 40  GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 99

Query: 68  EETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            ET   +   +   + YL     +++    R  
Sbjct: 100 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 132

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 64.5 bits (156), Expect = 6e-14
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 8   LDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
           L    +K    E+  L++L   PNI+TL + V    +    +  E+V   D K   +   
Sbjct: 68  LKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--- 124

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
            L++   +  +Y+I  AL Y HS+
Sbjct: 125 TLTDYDIRFYMYEILKALDYCHSM 148

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 9e-14
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K ++    K++ + FA E++ L  L  HPNI+ L  +   +  +Y+ +EY   G+L   
Sbjct: 42  IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 101

Query: 60  I----------------EACVKLSEETCKCIVYQIAMALQYLHSL 88
           +                     LS +        +A  + YL   
Sbjct: 102 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 146

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 1e-13
 Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K+       +  ++   E   L+ +   P +VTL+ +   +  +++ L+Y+ GG+L + 
Sbjct: 60  LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 119

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSL 88
           +    + +E   +  V +I +AL++LH L
Sbjct: 120 LSQRERFTEHEVQIYVGEIVLALEHLHKL 148

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.2 bits (153), Expect = 2e-13
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK--L 66
           D    + F  E   +K + HPN+V L      +   Y+  E++  G+L   +  C +  +
Sbjct: 53  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112

Query: 67  SEETCKCIVYQIAMALQYLHS 87
           S      +  QI+ A++YL  
Sbjct: 113 SAVVLLYMATQISSAMEYLEK 133

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 2e-13
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 5/95 (5%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKIEACV 64
            +E   +   E+     L H NI+    +    +     +++  +Y + G L   +    
Sbjct: 37  REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY- 95

Query: 65  KLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYI 99
            ++ E    +    A  L +LH  +   Q KP   
Sbjct: 96  TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 2e-13
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 1   MKEVQNALDKEN-RKYFANEVDNLKSLSHPNIVTLY------ESVLWKDNIYMFLEYVQG 53
           +K++      E   K    E+  LK + H N++ L       E++    + Y+ + ++  
Sbjct: 48  IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-- 105

Query: 54  GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYI 99
           G    K+    KL E+  + +VYQ+   L+Y+H+   ++   KP  +
Sbjct: 106 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL 152

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.2 bits (153), Expect = 2e-13
 Identities = 19/83 (22%), Positives = 43/83 (51%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           +  +  +  ++  +E   L  ++HP I+ ++ +      I+M ++Y++GG+L S +    
Sbjct: 40  EIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ 99

Query: 65  KLSEETCKCIVYQIAMALQYLHS 87
           +      K    ++ +AL+YLHS
Sbjct: 100 RFPNPVAKFYAAEVCLALEYLHS 122

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 4e-13
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 17/108 (15%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K +++   +++     +E++ +K +  H NI+ L  +      +Y+ +EY   G+L+  
Sbjct: 50  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109

Query: 60  IEAC----------------VKLSEETCKCIVYQIAMALQYLHSLMSV 91
           ++A                  +LS +      YQ+A  ++YL S   +
Sbjct: 110 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI 157

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 62.2 bits (150), Expect = 4e-13
 Identities = 20/80 (25%), Positives = 31/80 (38%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
            D+        E+  LK L H NIV LY+ +  K  + +  E++     K        L 
Sbjct: 39  EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE 98

Query: 68  EETCKCIVYQIAMALQYLHS 87
             T K  + Q+   + Y H 
Sbjct: 99  SVTAKSFLLQLLNGIAYCHD 118

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.2 bits (150), Expect = 4e-13
 Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 24/111 (21%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +K ++     + +  F  E   +    +PNIV L         + +  EY+  GDL   +
Sbjct: 48  VKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 107

Query: 61  EAC------------------------VKLSEETCKCIVYQIAMALQYLHS 87
            +                           LS     CI  Q+A  + YL  
Sbjct: 108 RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 158

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 8e-13
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 2   KEVQNALDKENRKYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGG-DLKS 58
             + +  +  N      EV  LK +S     ++ L +     D+  + LE  +   DL  
Sbjct: 40  DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD 99

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHS 87
            I     L EE  +   +Q+  A+++ H+
Sbjct: 100 FITERGALQEELARSFFWQVLEAVRHCHN 128

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 8e-13
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
           +KE++ A   +  K   +E   + S+ +P++  L    L      +      G  L    
Sbjct: 43  IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR 102

Query: 61  EACVKLSEETCKCIVYQIAMALQYLH 86
           E    +  +       QIA  + YL 
Sbjct: 103 EHKDNIGSQYLLNWCVQIAKGMNYLE 128

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.8 bits (144), Expect = 3e-12
 Identities = 26/84 (30%), Positives = 44/84 (52%)

Query: 5   QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
           Q  +  +  ++  NE   L++++ P +V L  S     N+YM +EYV GG++ S +    
Sbjct: 77  QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG 136

Query: 65  KLSEETCKCIVYQIAMALQYLHSL 88
           + SE   +    QI +  +YLHSL
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSL 160

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 5e-12
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 9   DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKL 66
              + + F  E   +K L H  +V LY  V+ ++ IY+  EY+  G L    K E    L
Sbjct: 52  GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYL 110

Query: 67  SEETCKCIVYQIAMALQYLH 86
                  +  QIA  + Y+ 
Sbjct: 111 RLPQLVDMAAQIASGMAYVE 130

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 6e-12
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGD-LKSK 59
           +K ++    ++ R  F  E   +   SH NI+ L   +     + +  EY++ G   K  
Sbjct: 41  IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 100

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            E   + S      ++  IA  ++YL ++  V++    R I
Sbjct: 101 REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNI 141

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 8e-12
 Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESV----LWKDNIYMFLEYVQGGDL 56
           +K++     +   +    E+  L    H NI+ + + +    + +      + ++ G DL
Sbjct: 38  IKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADL 97

Query: 57  KSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
              ++    LS +     +YQI   L+Y+HS   +++  KP  +
Sbjct: 98  YKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 140

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 2e-11
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 1   MKEVQNAL-DKENRKYFANEVDNLKSLSHPNIVTLYESV-----LWKDNIYMFLEYVQGG 54
           +K++        + K    E+  LK + H N++ L +       L + N    + ++ G 
Sbjct: 48  VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 107

Query: 55  DLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAW 101
           D  + I  C KL+++  + ++YQI   L+Y+HS   ++   KP  +A 
Sbjct: 108 D-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 2e-11
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 9/96 (9%)

Query: 1   MKEVQNALDKEN-RKYFANEVDNLKSLSHPNIVTLYESVLW--------KDNIYMFLEYV 51
           +K+V    +KE        E+  L+ L H N+V L E            K +IY+  ++ 
Sbjct: 40  LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 99

Query: 52  QGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
           +           VK +    K ++  +   L Y+H 
Sbjct: 100 EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 135

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 8e-11
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN-IYMFLEYVQGGDLKS- 58
           +K +    D      F  E   +K  SHPN+++L    L  +    + L Y++ GDL++ 
Sbjct: 60  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 119

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLH 86
                   + +       Q+A  +++L 
Sbjct: 120 IRNETHNPTVKDLIGFGLQVAKGMKFLA 147

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 8e-11
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 10  KENRKYFANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           K        E    K +     I T+       D   M +E +             K S 
Sbjct: 43  KTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSL 102

Query: 69  ETCKCIVYQIAMALQYLHS 87
           +T   +  Q+   ++Y+HS
Sbjct: 103 KTVLLLADQMISRIEYIHS 121

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 1e-10
 Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 2/93 (2%)

Query: 1   MKEVQNALDKEN-RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS- 58
           +K+++   + E        E+  LK L+HPNIV L + +  ++ +Y+  E++     K  
Sbjct: 32  LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91

Query: 59  KIEACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
              A   +     K  ++Q+   L + HS   +
Sbjct: 92  DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 1e-10
 Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 11/110 (10%)

Query: 1   MKEVQNAL-DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQG 53
           +K++     ++ + K    E+  +K ++H NI++L      +       ++Y+ +E +  
Sbjct: 47  IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 106

Query: 54  GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWK 102
              +           E    ++YQ+   +++LHS   +++  KP  I  K
Sbjct: 107 NLCQVIQMEL---DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 153

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 3e-10
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 1   MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
           +K V+ +  D+        E+  LK L H NIV L++ +     + +  E+      K  
Sbjct: 32  LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF 91

Query: 60  IEACVKLSEETCKCIVYQIAMALQYLH 86
                 L  E  K  ++Q+   L + H
Sbjct: 92  DSCNGDLDPEIVKSFLFQLLKGLGFCH 118

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 1e-09
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 19/118 (16%)

Query: 1   MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKS 58
           +K ++        +   +E+  L  + H   V        K    + + +E+ + G+L +
Sbjct: 48  VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 107

Query: 59  KIEACVK----------------LSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
            + +                   L+ E   C  +Q+A  +++L S   +++    R I
Sbjct: 108 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 165

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 4e-09
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 1   MKEVQNALDKEN-RKYFANEVDNLKSLS---HPNIVTLYESVLW-----KDNIYMFLEYV 51
           +K V+    +E        EV  L+ L    HPN+V L++         +  + +  E+V
Sbjct: 38  LKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 97

Query: 52  QGGDLK-SKIEACVKLSEETCKCIVYQIAMALQYLHS 87
                          +  ET K +++Q+   L +LHS
Sbjct: 98  DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 134

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 2/108 (1%)

Query: 10  KENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
           + +     +E    K L+    I  +Y       +  + ++ +             K S 
Sbjct: 41  RSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSV 100

Query: 69  ETCKCIVYQIAMALQYLHSLMSV-NQHKPRYIAWKVGSILAGGKLYFI 115
           +T      Q+   +Q +H    V    KP        +      +Y +
Sbjct: 101 KTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV 148

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 8/82 (9%), Positives = 21/82 (25%), Gaps = 11/82 (13%)

Query: 8   LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
                 +   NE   L+ L    +  +Y      +   + +E +   +L           
Sbjct: 53  FSVLAIRSARNEFRALQKLQGLAVPKVYAW----EGNAVLMELIDAKELYRVRVEN---- 104

Query: 68  EETCKCIVYQIAMALQYLHSLM 89
                 ++  I   +   +   
Sbjct: 105 ---PDEVLDMILEEVAKFYHRG 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	131
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.98
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.96
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.96
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.96
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.94
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.94
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.94
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.91
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.91
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.91
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.91
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.91
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.86
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.69
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.69
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.68
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.38
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.35
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.86
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	89.74
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	81.05

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=188.14  Aligned_cols=129  Identities=21%  Similarity=0.255  Sum_probs=108.1

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      ||++......+..+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++...+.+++..++.++.|++.
T Consensus        35 iK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~  114 (271)
T d1nvra_          35 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA  114 (271)
T ss_dssp             EEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHH
T ss_pred             EEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            35554444444556789999999999999999999999999999999999999999999987778999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeeec------cccccCCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN------RQVRSGNVNGPF  129 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~------~~~~~~~~gtp~  129 (131)
                      ||.|+|++|++| ||||+|||++.++.+|++|||++..      .....+.+|||.
T Consensus       115 al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~  170 (271)
T d1nvra_         115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP  170 (271)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGG
T ss_pred             HHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcC
Confidence            999999999999 9999999999999999999998752      222345567763

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5.8e-33  Score=189.86  Aligned_cols=129  Identities=16%  Similarity=0.197  Sum_probs=112.3

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      ||+++...++...+.+.+|+.+|+.++||||+++++++.+++..|+||||+++|+|.+++.+.+.+++..+..++.|++.
T Consensus        36 iK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~  115 (322)
T d1s9ja_          36 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK  115 (322)
T ss_dssp             EEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             EEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            35555445566678899999999999999999999999999999999999999999999998888999999999999999


Q ss_pred             HHHHHHh-ccccc-cccccceEEecCCeeeccceeeee--ccccccCCCCCCC
Q psy2929          81 ALQYLHS-LMSVN-QHKPRYIAWKVGSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        81 ~l~~lh~-~~~~h-dlk~~nili~~~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      ||.|+|+ +|++| ||||+|||++.++.+|++|||++.  ......+.+|||+
T Consensus       116 aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~  168 (322)
T d1s9ja_         116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS  168 (322)
T ss_dssp             HHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSC
T ss_pred             HHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCcc
Confidence            9999997 59999 999999999999999999999886  3334455677764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=5.4e-32  Score=184.10  Aligned_cols=129  Identities=19%  Similarity=0.223  Sum_probs=114.4

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (131)
                      ||++...  .+....+.+.+|+.+++.++||||+++++++.+++..|+||||+.+|++..++...+++++..++.++.|+
T Consensus        45 vK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi  124 (309)
T d1u5ra_          45 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA  124 (309)
T ss_dssp             EEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             EEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHH
Confidence            3555432  24456677999999999999999999999999999999999999999998777777789999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeeeccccccCCCCCCC
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGPF  129 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~~~~~~~~~gtp~  129 (131)
                      +.||.|||++|++| ||||+|||++.++.+|++|||++..........|||+
T Consensus       125 ~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~  176 (309)
T d1u5ra_         125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPY  176 (309)
T ss_dssp             HHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGG
T ss_pred             HHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCcc
Confidence            99999999999999 9999999999999999999999987777777788874

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.5e-32  Score=180.46  Aligned_cols=106  Identities=24%  Similarity=0.332  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++...+.+++..+..++.|++.||.|+|++|+
T Consensus        48 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~i  127 (263)
T d2j4za1          48 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV  127 (263)
T ss_dssp             TCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34667899999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+|++|||++.
T Consensus       128 vHrDiKp~Nill~~~~~~kl~DFG~a~  154 (263)
T d2j4za1         128 IHRDIKPENLLLGSAGELKIADFGWSV  154 (263)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCSCS
T ss_pred             eeeeeccccceecCCCCEeecccceee
Confidence            99 999999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-31  Score=177.05  Aligned_cols=128  Identities=27%  Similarity=0.332  Sum_probs=108.9

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      |++... ......+.+.+|+++|++++||||+++++++.+    +...|++|||+++|+|.+++.....+++..+..++.
T Consensus        40 K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~  119 (270)
T d1t4ha_          40 CELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCR  119 (270)
T ss_dssp             EEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHH
T ss_pred             EEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHH
Confidence            444432 355667789999999999999999999999875    345799999999999999999888899999999999


Q ss_pred             HHHHHHHHHHhcc--ccc-cccccceEEe-cCCeeeccceeeee--ccccccCCCCCCC
Q psy2929          77 QIAMALQYLHSLM--SVN-QHKPRYIAWK-VGSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        77 ~~~~~l~~lh~~~--~~h-dlk~~nili~-~~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      |++.||.|||+++  ++| ||||+|||++ .++.+|++|||++.  ......+.+|||.
T Consensus       120 qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~  178 (270)
T d1t4ha_         120 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE  178 (270)
T ss_dssp             HHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCC
T ss_pred             HHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCcc
Confidence            9999999999998  999 9999999996 47899999999985  3333445677764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-31  Score=178.43  Aligned_cols=116  Identities=23%  Similarity=0.374  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++.. +.+++..++.++.|++.||.|||++|++
T Consensus        60 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~ii  138 (293)
T d1yhwa1          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVI  138 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            456789999999999999999999999999999999999999999998765 4799999999999999999999999999


Q ss_pred             c-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        92 h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      | ||||+|||++.++.+|++|||++..    .......+|||
T Consensus       139 HrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~  180 (293)
T d1yhwa1         139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP  180 (293)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCG
T ss_pred             ccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCC
Confidence            9 9999999999999999999998752    23344556776

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.7e-31  Score=180.55  Aligned_cols=129  Identities=23%  Similarity=0.328  Sum_probs=96.7

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      ||++.+.......+.+.+|+.+++.++||||+++++++.+++..|+||||++||+|.+++...+.+++..+..++.|++.
T Consensus        39 vK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~  118 (307)
T d1a06a_          39 IKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD  118 (307)
T ss_dssp             EEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHH
T ss_pred             EEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHH
Confidence            35554443344556788999999999999999999999999999999999999999999998888999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEe---cCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWK---VGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~---~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      ||.|+|++|++| ||||+||++.   .++.+|++|||++.   ......+.+|||.
T Consensus       119 al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~  174 (307)
T d1a06a_         119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG  174 (307)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CT
T ss_pred             HHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCcc
Confidence            999999999999 9999999995   46889999999875   3333445567764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-31  Score=180.31  Aligned_cols=121  Identities=23%  Similarity=0.393  Sum_probs=106.5

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      .....+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++.. .+++++..+..++.|++.||.|||+
T Consensus        49 ~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~  128 (288)
T d2jfla1          49 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD  128 (288)
T ss_dssp             SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344556789999999999999999999999999999999999999999999765 4469999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      +|++| ||||+|||++.++.+|++|||++.    ......+..|||.
T Consensus       129 ~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~  175 (288)
T d2jfla1         129 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY  175 (288)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCT
T ss_pred             CCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccc
Confidence            99999 999999999999999999999874    2223445667763

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-31  Score=182.52  Aligned_cols=120  Identities=20%  Similarity=0.213  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ....+.+.+|+.+|+.++||||+++++++.+++..|+||||+++|+|.+++...+.+++..++.++.|++.||.|+|++|
T Consensus        46 ~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~  125 (337)
T d1o6la_          46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  125 (337)
T ss_dssp             TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcC
Confidence            33567788999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeec----cccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp~  129 (131)
                      ++| ||||+|||++.+|.+|++|||++..    .......+|||.
T Consensus       126 iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~  170 (337)
T d1o6la_         126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  170 (337)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGG
T ss_pred             ccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHH
Confidence            999 9999999999999999999998852    233345567763

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-31  Score=178.87  Aligned_cols=120  Identities=22%  Similarity=0.266  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      +...+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++...+.+++..++.++.|++.||.|+|++|
T Consensus        49 ~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~  128 (288)
T d1uu3a_          49 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG  128 (288)
T ss_dssp             TTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcccc
Confidence            33556789999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeeecc------ccccCCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIENR------QVRSGNVNGPF  129 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~~~------~~~~~~~gtp~  129 (131)
                      ++| ||||+|||++.++.+|++|||++...      ....+.+|||.
T Consensus       129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~  175 (288)
T d1uu3a_         129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ  175 (288)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGG
T ss_pred             EEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCcc
Confidence            999 99999999999999999999987522      22334567763

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2e-30  Score=176.84  Aligned_cols=118  Identities=21%  Similarity=0.340  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+++.++||||+++++++.+++..|+||||++||++...+.....+++...+.++.|++.|+.|+|++|+
T Consensus        46 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  125 (316)
T d1fota_          46 KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI  125 (316)
T ss_dssp             TCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcE
Confidence            35677899999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeeec-cccccCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIEN-RQVRSGNVNGP  128 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~~-~~~~~~~~gtp  128 (131)
                      +| ||||+|||++.+|.+|++|||++.. .....+.+|||
T Consensus       126 iHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~  165 (316)
T d1fota_         126 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP  165 (316)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCT
T ss_pred             EccccCchheeEcCCCCEEEecCccceEeccccccccCcc
Confidence            99 9999999999999999999998863 33344566776

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.5e-30  Score=176.23  Aligned_cols=115  Identities=17%  Similarity=0.276  Sum_probs=101.5

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |++....+....+.+.+|+.+|+.++||||+++++++.+++..|++|||+++|+|.+++.... .+++.....++.|++.
T Consensus        60 K~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~  139 (299)
T d1jpaa_          60 KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA  139 (299)
T ss_dssp             EECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             EEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHH
Confidence            444444566777889999999999999999999999999999999999999999999888744 6899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|||+++++| ||||+|||++.++.+||+|||++.
T Consensus       140 gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  176 (299)
T d1jpaa_         140 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR  176 (299)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             HHHHHhhCCCccCccccceEEECCCCcEEECCcccce
Confidence            999999999999 999999999999999999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=4.3e-30  Score=172.36  Aligned_cols=118  Identities=24%  Similarity=0.278  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++ ||||+++++++.+++..|++|||+++|+|.+++...+++++..++.++.|++.||.|||++|
T Consensus        51 ~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~  130 (277)
T d1phka_          51 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  130 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            34567889999999997 99999999999999999999999999999999998889999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCC
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      ++| ||||+|||++.++.+|++|||++.   .........|||
T Consensus       131 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  173 (277)
T d1phka_         131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP  173 (277)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCG
T ss_pred             CcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccC
Confidence            999 999999999999999999999874   333344455665

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.3e-30  Score=171.84  Aligned_cols=115  Identities=16%  Similarity=0.231  Sum_probs=103.2

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~   79 (131)
                      ||+++...++...+.+.+|+++|++++||||+++++++.+ +..|+||||+++|+|.+++... ..+++..+..++.|++
T Consensus        41 vK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~  119 (285)
T d1u59a_          41 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS  119 (285)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred             EEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHH
Confidence            4566555567778889999999999999999999999865 4578999999999999998654 4699999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .||.|+|+++++| ||||+|||++.++.+|++|||++.
T Consensus       120 ~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~  157 (285)
T d1u59a_         120 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  157 (285)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             HHHHHHHhCCeecCcCchhheeeccCCceeeccchhhh
Confidence            9999999999999 999999999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-30  Score=172.24  Aligned_cols=115  Identities=19%  Similarity=0.215  Sum_probs=101.4

Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHH
Q psy2929           1 MKEVQN-ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~-~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~   78 (131)
                      ||+++. ..+++..+.+++|+.+++.++||||+++++++ .++..+++|||+++|+|.+++... ..+++..+..++.|+
T Consensus        35 vK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi  113 (276)
T d1uwha_          35 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT  113 (276)
T ss_dssp             EEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHH
T ss_pred             EEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEE-eccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHH
Confidence            355542 23556778899999999999999999999976 455689999999999999999765 469999999999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       114 ~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~  152 (276)
T d1uwha_         114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT  152 (276)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSC
T ss_pred             HHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccccee
Confidence            99999999999999 999999999999999999999874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.2e-30  Score=171.80  Aligned_cols=129  Identities=26%  Similarity=0.432  Sum_probs=98.9

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe--CCeeEEeeeccCCCChHHHHHh----ccCCCHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLW--KDNIYMFLEYVQGGDLKSKIEA----CVKLSEETCKC   73 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~   73 (131)
                      ||++... .++...+.+.+|+++++.++||||+++++++.+  .+..|++|||+++|+|.+++..    ...+++..++.
T Consensus        34 vK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~  113 (269)
T d2java1          34 WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR  113 (269)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             EEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHH
Confidence            3555432 356667889999999999999999999999965  4568999999999999999864    23699999999


Q ss_pred             HHHHHHHHHHHHHhcc-----ccc-cccccceEEecCCeeeccceeeee----ccccccCCCCCCC
Q psy2929          74 IVYQIAMALQYLHSLM-----SVN-QHKPRYIAWKVGSILAGGKLYFIE----NRQVRSGNVNGPF  129 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~-----~~h-dlk~~nili~~~~~~kl~df~~~~----~~~~~~~~~gtp~  129 (131)
                      ++.|++.||.|+|+.+     ++| ||||+|||++.++.+|++|||++.    ......+..|||.
T Consensus       114 i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~  179 (269)
T d2java1         114 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY  179 (269)
T ss_dssp             HHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCS
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcc
Confidence            9999999999999976     999 999999999999999999999874    2333445667773

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.96  E-value=1e-29  Score=175.40  Aligned_cols=128  Identities=20%  Similarity=0.273  Sum_probs=107.8

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~   79 (131)
                      ||++.+ ......+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+++.. .+.+++..+..++.|++
T Consensus        56 vK~i~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~  134 (350)
T d1koaa2          56 AKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC  134 (350)
T ss_dssp             EEEECC-CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHH
T ss_pred             EEEEcc-cchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence            355532 2445667899999999999999999999999999999999999999999999854 45799999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEec--CCeeeccceeeeec---cccccCCCCCCC
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKV--GSILAGGKLYFIEN---RQVRSGNVNGPF  129 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~--~~~~kl~df~~~~~---~~~~~~~~gtp~  129 (131)
                      .||.|||++|++| ||||+|||++.  ++.+|++|||++..   .....+..|||+
T Consensus       135 ~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~  190 (350)
T d1koaa2         135 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE  190 (350)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTT
T ss_pred             HHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCccc
Confidence            9999999999999 99999999964  57899999998752   233334566654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.96  E-value=9.8e-30  Score=175.57  Aligned_cols=107  Identities=23%  Similarity=0.300  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ....+.+.+|+.+++.++||||+++++++.+++..|+||||+++|+|.+.+...+ ++++..++.++.|++.||.|||++
T Consensus        67 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_          67 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4456778899999999999999999999999999999999999999998876554 699999999999999999999999


Q ss_pred             cccc-cccccceEEe--cCCeeeccceeeee
Q psy2929          89 MSVN-QHKPRYIAWK--VGSILAGGKLYFIE  116 (131)
Q Consensus        89 ~~~h-dlk~~nili~--~~~~~kl~df~~~~  116 (131)
                      |++| ||||+|||++  .++.+||+|||++.
T Consensus       147 ~iiHRDiKp~NILl~~~~~~~vkL~DFGla~  177 (352)
T d1koba_         147 SIVHLDIKPENIMCETKKASSVKIIDFGLAT  177 (352)
T ss_dssp             TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             CeeecccccccccccccCCCeEEEeecccce
Confidence            9999 9999999998  56899999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-29  Score=169.38  Aligned_cols=114  Identities=16%  Similarity=0.199  Sum_probs=100.7

Q ss_pred             cccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (131)
                      |+++.. .++...+.+.+|+.+|+.++||||+++++++..+ ..++||||+++|+|.+++.....+++..+..++.|++.
T Consensus        40 K~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~  118 (277)
T d1xbba_          40 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM  118 (277)
T ss_dssp             EEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred             EEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHH
Confidence            444422 3445567899999999999999999999998654 56899999999999999998888999999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|+++++| ||||+|||++.++.+|++|||++.
T Consensus       119 gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~  155 (277)
T d1xbba_         119 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK  155 (277)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             HHhhHHhCCcccCCCcchhhcccccCcccccchhhhh
Confidence            999999999999 999999999999999999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-29  Score=170.11  Aligned_cols=117  Identities=27%  Similarity=0.322  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      ..+.+.+|+.+|+.++||||+++++++.+++..|+||||+++|+|.+++...+.+++..++.++.|++.||.|||+++++
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~iv  135 (293)
T d1jksa_          56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA  135 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhccee
Confidence            46789999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             c-cccccceEEecCC----eeeccceeeeec---cccccCCCCCC
Q psy2929          92 N-QHKPRYIAWKVGS----ILAGGKLYFIEN---RQVRSGNVNGP  128 (131)
Q Consensus        92 h-dlk~~nili~~~~----~~kl~df~~~~~---~~~~~~~~gtp  128 (131)
                      | ||||+|||++.++    .+|++|||++..   .....+..|||
T Consensus       136 HrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~  180 (293)
T d1jksa_         136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP  180 (293)
T ss_dssp             CCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCG
T ss_pred             ecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCC
Confidence            9 9999999998876    499999998753   23334445554

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=8.9e-30  Score=171.56  Aligned_cols=105  Identities=19%  Similarity=0.300  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+|+.++||||+++++++.+.+..|++|||+++|++.+++...  ..+++..+..++.|++.||.|+|++|
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          56 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567999999999999999999999999999999999999999999999764  36889999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+||+|||++.
T Consensus       136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~  163 (287)
T d1opja_         136 FIHRDLAARNCLVGENHLVKVADFGLSR  163 (287)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCCTT
T ss_pred             cccCccccCeEEECCCCcEEEcccccee
Confidence            999 999999999999999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.2e-29  Score=175.05  Aligned_cols=118  Identities=25%  Similarity=0.320  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ...+.+.+|+.+|+.++||||+++++++.+....++++|++.+|++.+.+...+.+++..++.++.|++.||.|||++|+
T Consensus        83 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i  162 (350)
T d1rdqe_          83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL  162 (350)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            44567899999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeeecc-ccccCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIENR-QVRSGNVNGP  128 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~~~-~~~~~~~gtp  128 (131)
                      +| ||||+|||++.++.+||+|||++... ....+..|||
T Consensus       163 iHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~  202 (350)
T d1rdqe_         163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP  202 (350)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECG
T ss_pred             ecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCcc
Confidence            99 99999999999999999999988532 2333445665

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-29  Score=168.09  Aligned_cols=105  Identities=18%  Similarity=0.301  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++++..++..|+||||+++|+|.+++.... .+++.....++.|++.||.|+|++++
T Consensus        43 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i  122 (263)
T d1sm2a_          43 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  122 (263)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce
Confidence            34679999999999999999999999999999999999999999999987653 58889999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+|||++.++.+||+|||++.
T Consensus       123 iHrDlKp~Nill~~~~~~Kl~DFGla~  149 (263)
T d1sm2a_         123 IHRDLAARNCLVGENQVIKVSDFGMTR  149 (263)
T ss_dssp             CCTTCSGGGEEECGGGCEEECSCC---
T ss_pred             eecccchhheeecCCCCeEecccchhe
Confidence            99 999999999999999999999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.9e-29  Score=170.71  Aligned_cols=106  Identities=25%  Similarity=0.316  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      .+.+.+.+|+.+|+.++||||+++++++.+++..|+||||+++|+|.+++...+ .+++..++.++.|++.||.|||++|
T Consensus        43 ~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~  122 (321)
T d1tkia_          43 TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            345668899999999999999999999999999999999999999999998665 6999999999999999999999999


Q ss_pred             ccc-cccccceEEecC--Ceeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVG--SILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~--~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.+  +.+|++|||++.
T Consensus       123 iiHrDlKp~NIll~~~~~~~ikl~DFG~~~  152 (321)
T d1tkia_         123 IGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             CCcccccccceeecCCCceEEEEcccchhh
Confidence            999 999999999854  478999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=5.5e-29  Score=172.49  Aligned_cols=112  Identities=18%  Similarity=0.191  Sum_probs=100.1

Q ss_pred             HHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc-cccc
Q psy2929          18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN-QHKP   96 (131)
Q Consensus        18 ~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~   96 (131)
                      +|+.+++.++||||+++++++.+++..|+||||+++|+|.+++.....+++..++.++.|++.||.|+|++|++| ||||
T Consensus        56 ~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP  135 (364)
T d1omwa3          56 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKP  135 (364)
T ss_dssp             HHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeecc
Confidence            446777788999999999999999999999999999999999998888999999999999999999999999999 9999


Q ss_pred             cceEEecCCeeeccceeeeec--cccccCCCCCCC
Q psy2929          97 RYIAWKVGSILAGGKLYFIEN--RQVRSGNVNGPF  129 (131)
Q Consensus        97 ~nili~~~~~~kl~df~~~~~--~~~~~~~~gtp~  129 (131)
                      +|||++.++.+|++|||++..  ........|||.
T Consensus       136 ~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~  170 (364)
T d1omwa3         136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  170 (364)
T ss_dssp             GGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGG
T ss_pred             ceeEEcCCCcEEEeeeceeeecCCCcccccccccc
Confidence            999999999999999998752  233444567764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-28  Score=165.99  Aligned_cols=116  Identities=18%  Similarity=0.234  Sum_probs=103.5

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~   79 (131)
                      ||++.....+...+.+.+|+.+++.++||||+++++++...+..++++|++.++++.+.+... ..+++..+..++.|++
T Consensus        41 vK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~  120 (283)
T d1mqba_          41 IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA  120 (283)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHH
T ss_pred             EEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHH
Confidence            355554556667778999999999999999999999999999999999999999999888765 4689999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .|+.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       121 ~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  158 (283)
T d1mqba_         121 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  158 (283)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             HhhhhccccccccCccccceEEECCCCeEEEcccchhh
Confidence            9999999999999 999999999999999999999875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-29  Score=170.00  Aligned_cols=117  Identities=19%  Similarity=0.278  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .+.+.+|+.+++.++||||+++++++.+++..|+||||+.++++..+......+++..+..++.|++.||.|+|++|++|
T Consensus        44 ~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiH  123 (299)
T d1ua2a_          44 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH  123 (299)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceec
Confidence            35688999999999999999999999999999999999988777666655567999999999999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeeec----cccccCCCCCCC
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGPF  129 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp~  129 (131)
                       ||||+|||++.++.+|++|||++..    .......+|||+
T Consensus       124 rDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~  165 (299)
T d1ua2a_         124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRW  165 (299)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCT
T ss_pred             ccCCcceEEecCCCccccccCccccccCCCcccccceecChh
Confidence             9999999999999999999998742    223344567764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7e-29  Score=169.68  Aligned_cols=109  Identities=25%  Similarity=0.371  Sum_probs=96.4

Q ss_pred             ccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------------
Q psy2929           8 LDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------------   64 (131)
Q Consensus         8 ~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------------   64 (131)
                      .+....+.+.+|+.+++.+ +||||+++++++.+.+..|+||||+++|+|.+++....                      
T Consensus        79 ~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (325)
T d1rjba_          79 ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL  158 (325)
T ss_dssp             -----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC-------------------
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhcccccccccccc
Confidence            3455667789999999988 89999999999999999999999999999999997542                      


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+++..++.++.|++.||.|||+++++| ||||+|||++.++.+|++|||++.
T Consensus       159 ~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~  212 (325)
T d1rjba_         159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR  212 (325)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccc
Confidence             3788889999999999999999999999 999999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=163.62  Aligned_cols=114  Identities=22%  Similarity=0.338  Sum_probs=97.4

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (131)
                      |.+.........+.+.+|+.+++.++||||+++++++. ++..|+||||+++|++.+++... ..+++..+..++.|++.
T Consensus        41 k~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~  119 (273)
T d1mp8a_          41 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST  119 (273)
T ss_dssp             EECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred             EEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHH
Confidence            34444456667788999999999999999999999985 56789999999999999987654 36899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|+|+++++| ||||+||+++.++.+|++|||++.
T Consensus       120 gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_         120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             HhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence            999999999999 999999999999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-28  Score=166.93  Aligned_cols=117  Identities=21%  Similarity=0.317  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHH-cCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLK-SLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~-~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|..++. .++||||+++++++.+++..|+||||+++|+|.+++.....+++..++.++.|++.||.|||++++
T Consensus        45 ~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~i  124 (320)
T d1xjda_          45 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI  124 (320)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4455667777665 689999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeeec----cccccCCCCCC
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIEN----RQVRSGNVNGP  128 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~~----~~~~~~~~gtp  128 (131)
                      +| ||||+|||++..+.+|++|||++..    ........|||
T Consensus       125 iHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~  167 (320)
T d1xjda_         125 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTP  167 (320)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCG
T ss_pred             eeccCcccceeecCCCceeccccchhhhcccccccccccCCCC
Confidence            99 9999999999999999999998752    22233345665

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=4e-28  Score=162.57  Aligned_cols=116  Identities=20%  Similarity=0.266  Sum_probs=103.4

Q ss_pred             Ccccccc--ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHH
Q psy2929           1 MKEVQNA--LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCI   74 (131)
Q Consensus         1 vk~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   74 (131)
                      ||++.+.  .++...+.+.+|+++++.++||||+++++++..++    ..|+||||+++++|.+.+...+.+++..+..+
T Consensus        37 iK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i  116 (277)
T d1o6ya_          37 VKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV  116 (277)
T ss_dssp             EEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHH
T ss_pred             EEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHH
Confidence            3555532  35566778999999999999999999999998754    37899999999999999988888999999999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.||.|+|++|++| ||||+|||++.++..+++|||+..
T Consensus       117 ~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_         117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhh
Confidence            999999999999999999 999999999999999999998653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-28  Score=164.64  Aligned_cols=115  Identities=21%  Similarity=0.322  Sum_probs=99.7

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc----------------c
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------V   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------------~   64 (131)
                      |++....+.+..+.+.+|+.+|+.+ +||||+++++++.+++..|+||||+++|+|.+++...                .
T Consensus        43 K~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  122 (309)
T d1fvra_          43 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS  122 (309)
T ss_dssp             EEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSC
T ss_pred             EEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccC
Confidence            3443344555677899999999998 7999999999999999999999999999999999643                3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .+++.....++.|++.|+.|+|+++++| ||||+|||++.++.+|++|||++.
T Consensus       123 ~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~  175 (309)
T d1fvra_         123 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  175 (309)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             CCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccc
Confidence            5889999999999999999999999999 999999999999999999999875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-28  Score=162.79  Aligned_cols=104  Identities=20%  Similarity=0.276  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.++++++||||+++++++. ++..|+||||+++|+|.+++....  .+++..+..++.|++.||.|+|+++
T Consensus        51 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          51 SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467999999999999999999999774 456799999999999999776433  6899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+||+|||++.
T Consensus       130 ivHrDiKp~NIll~~~~~~Kl~DFGla~  157 (272)
T d1qpca_         130 YIHRDLRAANILVSDTLSCKIADFGLAR  157 (272)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cccCccchhheeeecccceeeccccceE
Confidence            999 999999999999999999999875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-28  Score=164.25  Aligned_cols=115  Identities=21%  Similarity=0.353  Sum_probs=96.4

Q ss_pred             Cccccccc-cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHh--ccCCCHHHHHHHHHH
Q psy2929           1 MKEVQNAL-DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA--CVKLSEETCKCIVYQ   77 (131)
Q Consensus         1 vk~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~   77 (131)
                      ||++.... .+...+.+.+|+.++++++||||+++++++.+++..|+|||++.+ .+.+++..  ...+++..++.++.|
T Consensus        32 vK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~q  110 (298)
T d1gz8a_          32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQ  110 (298)
T ss_dssp             EEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHH
T ss_pred             EEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHH
Confidence            35554222 233467789999999999999999999999999999999999965 55555543  336899999999999


Q ss_pred             HHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          78 IAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        78 ~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.||.|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       111 il~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~  150 (298)
T d1gz8a_         111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR  150 (298)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHH
T ss_pred             HHHHHHHhhcCCEEccccCchheeecccCcceeccCCcce
Confidence            999999999999999 999999999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=9e-28  Score=162.57  Aligned_cols=116  Identities=20%  Similarity=0.267  Sum_probs=104.3

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------------
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------   64 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------   64 (131)
                      ||++......+..+.+.+|+.+++.++||||+++++++.+.+..++++|++++|+|.+++....                
T Consensus        48 vK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  127 (301)
T d1lufa_          48 VKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA  127 (301)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC---------------
T ss_pred             EEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhh
Confidence            4555555566677889999999999999999999999999999999999999999999996532                


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 --------KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 --------~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                              .++......++.|++.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       128 ~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~  188 (301)
T d1lufa_         128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR  188 (301)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             hccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhhe
Confidence                    3678889999999999999999999999 999999999999999999999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.1e-28  Score=159.74  Aligned_cols=105  Identities=17%  Similarity=0.256  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++|++.+++... ..+++..+..++.|++.||.|+|++|+
T Consensus        42 ~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~i  121 (258)
T d1k2pa_          42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF  121 (258)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence            3467999999999999999999999999999999999999999999997654 468899999999999999999999999


Q ss_pred             cc-cccccceEEecCCeeeccceeeee
Q psy2929          91 VN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        91 ~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +| ||||+||+++.++.+|++|||++.
T Consensus       122 iH~dlk~~Nill~~~~~~kl~DfG~a~  148 (258)
T d1k2pa_         122 LHRDLAARNCLVNDQGVVKVSDFGLSR  148 (258)
T ss_dssp             CCSCCSGGGEEECTTCCEEECCCSSCC
T ss_pred             ccccccceeEEEcCCCcEEECcchhhe
Confidence            99 999999999999999999999874

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.2e-27  Score=159.98  Aligned_cols=116  Identities=20%  Similarity=0.227  Sum_probs=103.7

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQI   78 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~   78 (131)
                      ||++++..+....+.+.+|+++|++++||||+++++++.. ++..++||||++++++.+++.... ..+......++.|+
T Consensus        60 vK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qi  139 (311)
T d1r0pa_          60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV  139 (311)
T ss_dssp             EEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHH
T ss_pred             EEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHH
Confidence            4556555677788899999999999999999999999876 458899999999999999988654 57778889999999


Q ss_pred             HHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          79 AMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        79 ~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.||.|+|+.+++| ||||+|||++.++.+|++|||++.
T Consensus       140 a~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~  178 (311)
T d1r0pa_         140 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR  178 (311)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGC
T ss_pred             HHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchh
Confidence            99999999999999 999999999999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-27  Score=161.09  Aligned_cols=104  Identities=21%  Similarity=0.280  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ..+.+.+|+.+++.++||||+++++++. .+..|+||||+++|++..++...  ..+++..++.++.|++.||.|||+++
T Consensus        55 ~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          55 SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            3467999999999999999999999985 45689999999999999888653  36899999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+||+|||++.
T Consensus       134 ivH~DlKp~NIll~~~~~~kl~DfGla~  161 (285)
T d1fmka3         134 YVHRDLRAANILVGENLVCKVADFGLAR  161 (285)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred             eecccccceEEEECCCCcEEEcccchhh
Confidence            999 999999999999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-27  Score=161.12  Aligned_cols=114  Identities=17%  Similarity=0.175  Sum_probs=97.4

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHH
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAM   80 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~   80 (131)
                      |+++...+.+..+.+.+|+.+++.++||||+++++++.++ ..+++++++.+++|.+.+.... .+++..+..++.|++.
T Consensus        44 K~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~  122 (317)
T d1xkka_          44 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK  122 (317)
T ss_dssp             EEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHH
T ss_pred             EEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHH
Confidence            3333334455677899999999999999999999999765 4677888899999998887654 6899999999999999


Q ss_pred             HHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          81 ALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        81 ~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ||.|||+++++| ||||+|||++.++.+|++|||++.
T Consensus       123 gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_         123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             HHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            999999999999 999999999999999999999875

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=1.2e-27  Score=160.69  Aligned_cols=116  Identities=21%  Similarity=0.216  Sum_probs=102.1

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      ||+++.. .++...+++.+|+.+|+.++||||+++++++.+++..++++|++.++.+..+....+.+++..+..++.|++
T Consensus        31 vK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  110 (286)
T d1ob3a_          31 LKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLL  110 (286)
T ss_dssp             EEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHH
T ss_pred             EEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHH
Confidence            4555432 234446789999999999999999999999999999999999998876666666667899999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .||+|+|+.+++| ||||+|||++.++.+|++|||.+.
T Consensus       111 ~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~  148 (286)
T d1ob3a_         111 NGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR  148 (286)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             HHHHHhccCcEEecCCCCceeeEcCCCCEEecccccce
Confidence            9999999999999 999999999999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=157.03  Aligned_cols=116  Identities=19%  Similarity=0.346  Sum_probs=103.9

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      ||++.+.........+.+|...+..+ +||||+++++++.+++..+++|||+++|++.+++....               
T Consensus        50 vK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~  129 (299)
T d1fgka_          50 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE  129 (299)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------C
T ss_pred             EEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCcc
Confidence            35555556666777888899988887 79999999999999999999999999999999997542               


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+++..++.++.|++.||.|+|+.+++| ||||+|||++.++.+|++|||++.
T Consensus       130 ~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~  183 (299)
T d1fgka_         130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR  183 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhc
Confidence             4789999999999999999999999999 999999999999999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=155.34  Aligned_cols=107  Identities=22%  Similarity=0.287  Sum_probs=96.6

Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh
Q psy2929           9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus         9 ~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      +++..+.+.+|+.+++.++||||+++++++.+ ...++++||+++|++.+.+... +.+++..+..++.|++.||.|+|+
T Consensus        51 ~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  129 (273)
T d1u46a_          51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES  129 (273)
T ss_dssp             -CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            34456789999999999999999999999965 4678999999999999887754 469999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++++| ||||+||+++.++.+|++|||++.
T Consensus       130 ~~iiHrDikp~NIll~~~~~vkl~DfGl~~  159 (273)
T d1u46a_         130 KRFIHRDLAARNLLLATRDLVKIGDFGLMR  159 (273)
T ss_dssp             TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             CCEeeeeecHHHhccccccceeeccchhhh
Confidence            99999 999999999999999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8e-27  Score=157.62  Aligned_cols=115  Identities=17%  Similarity=0.265  Sum_probs=91.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCC-eeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           2 KEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         2 k~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~-~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      |++.........+.+.+|...+.++ +||||+.+++.+...+ ..+++|||+++|+|.+++....               
T Consensus        49 K~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  128 (299)
T d1ywna1          49 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK  128 (299)
T ss_dssp             EEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC----------
T ss_pred             EEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhc
Confidence            4454444555667788888888776 6899999999886654 6899999999999999997532               


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 -KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       .+++..+..++.|++.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       129 ~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~  182 (299)
T d1ywna1         129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR  182 (299)
T ss_dssp             -CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC-----
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchh
Confidence             3778899999999999999999999999 999999999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.1e-27  Score=156.16  Aligned_cols=107  Identities=18%  Similarity=0.264  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCceeEEEEEEe-CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh
Q psy2929          11 ENRKYFANEVDNLKSLSHPNIVTLYESVLW-KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLHS   87 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh~   87 (131)
                      ...+.+.+|+.++++++||||+++++++.+ ++..|+|+||+++|+|.+++....  .+++..++.++.|++.|+.|+|+
T Consensus        42 ~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~  121 (262)
T d1byga_          42 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG  121 (262)
T ss_dssp             C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc
Confidence            345679999999999999999999999865 456899999999999999997543  58999999999999999999999


Q ss_pred             ccccc-cccccceEEecCCeeeccceeeeec
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFIEN  117 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~~~  117 (131)
                      ++++| ||+|+|||++.++.+|++|||++..
T Consensus       122 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~  152 (262)
T d1byga_         122 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  152 (262)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             CceeccccchHhheecCCCCEeeccccccee
Confidence            99999 9999999999999999999998864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-26  Score=155.77  Aligned_cols=116  Identities=22%  Similarity=0.207  Sum_probs=103.8

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc----------CCCHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------KLSEET   70 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~   70 (131)
                      ||++++....+....+.+|+.++++++||||+++++.+..+...++++||+++|+|.+++....          ..+...
T Consensus        55 vK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  134 (308)
T d1p4oa_          55 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK  134 (308)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHH
T ss_pred             EEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHH
Confidence            4566555566677789999999999999999999999999999999999999999999986432          357788


Q ss_pred             HHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          71 CKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +..++.|++.||.|+|+++++| ||||+|||++.++.+||+|||++.
T Consensus       135 ~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~  181 (308)
T d1p4oa_         135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  181 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccce
Confidence            9999999999999999999999 999999999999999999999874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-26  Score=158.11  Aligned_cols=116  Identities=22%  Similarity=0.326  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHH-cCCCCCceeEEEEEEe----CCeeEEeeeccCCCChHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLK-SLSHPNIVTLYESVLW----KDNIYMFLEYVQGGDLKSKIEACV--KLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        14 ~~~~~e~~~l~-~~~h~~iv~l~~~~~~----~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+.+|+.++. ..+||||++++++|.+    +...|+||||++||+|.+++...+  .+++..++.++.|++.||.|||
T Consensus        49 ~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH  128 (335)
T d2ozaa1          49 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  128 (335)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            35678998865 4589999999999976    456899999999999999998753  5899999999999999999999


Q ss_pred             hccccc-cccccceEEec---CCeeeccceeeee---ccccccCCCCCCC
Q psy2929          87 SLMSVN-QHKPRYIAWKV---GSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~---~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      ++|++| ||||+|||++.   .+.+|++|||++.   ........+|||+
T Consensus       129 ~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~  178 (335)
T d2ozaa1         129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY  178 (335)
T ss_dssp             HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCS
T ss_pred             HcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcc
Confidence            999999 99999999986   4579999999875   3334455567774

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-26  Score=156.51  Aligned_cols=116  Identities=22%  Similarity=0.244  Sum_probs=103.8

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcC-CCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc---------------
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV---------------   64 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---------------   64 (131)
                      ||+++..........+.+|+.+++.+ +||||+++++++.+++..+++|||+++|++.+++....               
T Consensus        58 vK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~  137 (311)
T d1t46a_          58 VKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED  137 (311)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC------------
T ss_pred             EEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccc
Confidence            35555455666777899999999998 69999999999999999999999999999999987543               


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          65 ---KLSEETCKCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        65 ---~~~~~~~~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                         .+++.....++.|++.|+.|||+++++| ||||+||+++..+.++++|||++.
T Consensus       138 ~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~  193 (311)
T d1t46a_         138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR  193 (311)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGS
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchhe
Confidence               4788899999999999999999999999 999999999999999999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-26  Score=158.62  Aligned_cols=115  Identities=18%  Similarity=0.220  Sum_probs=98.8

Q ss_pred             CccccccccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCe----eEEeeeccCCCChHHHHHhccCCCHHHHHHHHH
Q psy2929           1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN----IYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY   76 (131)
Q Consensus         1 vk~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (131)
                      ||++.+.......+.+.+|+.+|+.++||||+++++.+.....    .+++++++.+|+|.+++... ++++..++.++.
T Consensus        38 vK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~  116 (345)
T d1pmea_          38 IKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLY  116 (345)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC-CCCHHHHHHHHH
T ss_pred             EEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC-CCCHHHHHHHHH
Confidence            4666555556677789999999999999999999999976542    34444556688999999764 799999999999


Q ss_pred             HHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          77 QIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        77 ~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      |++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       117 qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~  157 (345)
T d1pmea_         117 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  157 (345)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCcee
Confidence            9999999999999999 999999999999999999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.1e-26  Score=153.34  Aligned_cols=116  Identities=21%  Similarity=0.205  Sum_probs=104.9

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIA   79 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (131)
                      ||+++.. ..+...+++.+|+.+++.++||||+++++++.+....+++++++.++++..++...+.+++..+..++.|++
T Consensus        32 vK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~  111 (292)
T d1unla_          32 LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL  111 (292)
T ss_dssp             EEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred             EEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHH
Confidence            3555432 344567889999999999999999999999999999999999999989988888877899999999999999


Q ss_pred             HHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          80 MALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        80 ~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      .||.|+|++|++| ||||+|||++.++.+|++|||.+.
T Consensus       112 ~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~  149 (292)
T d1unla_         112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR  149 (292)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHhhcCCEeeecccCcccccccCCceeeeecchhh
Confidence            9999999999999 999999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-26  Score=152.77  Aligned_cols=116  Identities=19%  Similarity=0.107  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCC-CChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccc
Q psy2929          14 KYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQG-GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMS   90 (131)
Q Consensus        14 ~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~   90 (131)
                      .++.+|+.+++.++  ||||+++++++.+++..|++||++.+ +++.+++.....+++..++.++.|++.||.|+|++|+
T Consensus        52 ~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~i  131 (273)
T d1xwsa_          52 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV  131 (273)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            34668999999885  89999999999999999999999975 5788888887789999999999999999999999999


Q ss_pred             cc-cccccceEEec-CCeeeccceeeee--ccccccCCCCCCC
Q psy2929          91 VN-QHKPRYIAWKV-GSILAGGKLYFIE--NRQVRSGNVNGPF  129 (131)
Q Consensus        91 ~h-dlk~~nili~~-~~~~kl~df~~~~--~~~~~~~~~gtp~  129 (131)
                      +| ||||+|||++. .+.+|++|||++.  ......+..|||.
T Consensus       132 iHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~  174 (273)
T d1xwsa_         132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV  174 (273)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGG
T ss_pred             ccccCcccceEEecCCCeEEECccccceecccccccccccCCC
Confidence            99 99999999985 5799999999875  3344455667764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-26  Score=157.12  Aligned_cols=126  Identities=21%  Similarity=0.313  Sum_probs=103.9

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC------eeEEeeeccCCCChHHHHHhccCCCHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD------NIYMFLEYVQGGDLKSKIEACVKLSEETCKC   73 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~   73 (131)
                      ||++.+. .++...+.+.+|+.+|+.++||||+++++++...+      ..|++|||+ +.++..+... ..+++..++.
T Consensus        48 iK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~  125 (346)
T d1cm8a_          48 IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQF  125 (346)
T ss_dssp             EEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHH
T ss_pred             EEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHh-ccccHHHHHH
Confidence            4566533 35566778999999999999999999999997655      469999999 5577776654 4799999999


Q ss_pred             HHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeeec-cccccCCCCCC
Q psy2929          74 IVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIEN-RQVRSGNVNGP  128 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~~-~~~~~~~~gtp  128 (131)
                      ++.|++.||.|||++|++| ||||+|||++.++.+|++|||++.. ....+...|||
T Consensus       126 ~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~  182 (346)
T d1cm8a_         126 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR  182 (346)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCG
T ss_pred             HHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccc
Confidence            9999999999999999999 9999999999999999999998753 22233444554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.4e-26  Score=157.99  Aligned_cols=106  Identities=20%  Similarity=0.276  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHcCCC-CCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2929          11 ENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLM   89 (131)
Q Consensus        11 ~~~~~~~~e~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~   89 (131)
                      ...+.+.+|+.+++.++| |||+++++.+.+....++++||+.+|+|.+.+...+.+++.....++.|++.|+.|+|+++
T Consensus        70 ~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_          70 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             SSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCC
Confidence            345668899999999976 8999999999999999999999999999999998888999999999999999999999999


Q ss_pred             ccc-cccccceEEecCCeeeccceeeee
Q psy2929          90 SVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        90 ~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++| ||||+|||++.++.+|++|||++.
T Consensus       150 ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         150 IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEeccCCccceeecCCCCEEEeeccchh
Confidence            999 999999999999999999999875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.7e-25  Score=147.74  Aligned_cols=99  Identities=17%  Similarity=0.167  Sum_probs=88.0

Q ss_pred             HHHHHHHHcCCCCCceeEEEEEEeCC----eeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh-----
Q psy2929          17 ANEVDNLKSLSHPNIVTLYESVLWKD----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS-----   87 (131)
Q Consensus        17 ~~e~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-----   87 (131)
                      +.|+..++.++||||+++++++.+++    ..|+||||+++|+|.+++.+. ++++.....++.|++.|+.|+|+     
T Consensus        45 e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~  123 (303)
T d1vjya_          45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            34555556789999999999998764    579999999999999999875 68888999999999999999996     


Q ss_pred             ---ccccc-cccccceEEecCCeeeccceeeee
Q psy2929          88 ---LMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        88 ---~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                         +|++| ||||+|||++.++.+||+|||++.
T Consensus       124 ~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_         124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             TCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence               59999 999999999999999999999765

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.7e-25  Score=151.97  Aligned_cols=115  Identities=22%  Similarity=0.299  Sum_probs=95.4

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeCC-----eeEEeeeccCCCChHHHHHhccCCCHHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSEETCKCI   74 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~-----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~   74 (131)
                      ||++.+. .+....+.+.+|+.+++.++|||++++++++....     ..+++++++.+|+|.+++.. ..+++..++.+
T Consensus        48 iK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i  126 (348)
T d2gfsa1          48 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFL  126 (348)
T ss_dssp             EEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHH
T ss_pred             EEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccHHHHHHH
Confidence            4555533 34556677899999999999999999999986432     34666777889999998865 37999999999


Q ss_pred             HHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          75 VYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        75 ~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.|++.||.|||++|++| ||||+|||++.++.+|++|||++.
T Consensus       127 ~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1         127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             HHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhc
Confidence            999999999999999999 999999999999999999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.91  E-value=6.5e-25  Score=149.82  Aligned_cols=114  Identities=25%  Similarity=0.254  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHcCC-CCCceeEEEEEEeC--CeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Q psy2929          12 NRKYFANEVDNLKSLS-HPNIVTLYESVLWK--DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL   88 (131)
Q Consensus        12 ~~~~~~~e~~~l~~~~-h~~iv~l~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~   88 (131)
                      ..+.+.+|+.+|+.++ ||||+++++++...  ...+++|||+.+++|....   ..+++..++.++.|++.||.|||++
T Consensus        72 ~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~  148 (328)
T d3bqca1          72 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM  148 (328)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            3466889999999995 99999999999854  4589999999999987653   3699999999999999999999999


Q ss_pred             cccc-cccccceEEecCC-eeeccceeeee---ccccccCCCCCC
Q psy2929          89 MSVN-QHKPRYIAWKVGS-ILAGGKLYFIE---NRQVRSGNVNGP  128 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~-~~kl~df~~~~---~~~~~~~~~gtp  128 (131)
                      |++| ||||+|||++.++ .+|++|||++.   .........|||
T Consensus       149 gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~  193 (328)
T d3bqca1         149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR  193 (328)
T ss_dssp             TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCG
T ss_pred             ccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCc
Confidence            9999 9999999999754 69999999875   223334444554

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-24  Score=149.20  Aligned_cols=114  Identities=19%  Similarity=0.208  Sum_probs=90.7

Q ss_pred             HHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHH---hccCCCHHHHHHHHHHHHHHHHHHH
Q psy2929          16 FANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIE---ACVKLSEETCKCIVYQIAMALQYLH   86 (131)
Q Consensus        16 ~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~l~~lh   86 (131)
                      ..+|+.+|+.++||||+++++++...      ...|++|||++++.+..+..   ....+++..++.++.|++.||.|||
T Consensus        60 ~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH  139 (350)
T d1q5ka_          60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH  139 (350)
T ss_dssp             CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34799999999999999999998643      34789999997653333322   3346999999999999999999999


Q ss_pred             hccccc-cccccceEEecCC-eeeccceeeeec---cccccCCCCCCC
Q psy2929          87 SLMSVN-QHKPRYIAWKVGS-ILAGGKLYFIEN---RQVRSGNVNGPF  129 (131)
Q Consensus        87 ~~~~~h-dlk~~nili~~~~-~~kl~df~~~~~---~~~~~~~~gtp~  129 (131)
                      ++|++| ||||+|||++.++ .+||+|||++..   .....+..|+|.
T Consensus       140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  187 (350)
T d1q5ka_         140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY  187 (350)
T ss_dssp             TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTT
T ss_pred             hcCCcccCCCcceEEEecCCCceeEecccchhhccCCccccccccccc
Confidence            999999 9999999999775 899999998753   233344455553

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.3e-25  Score=149.64  Aligned_cols=116  Identities=18%  Similarity=0.189  Sum_probs=94.7

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC--------CeeEEeeeccCCCChHHHHHhccCCCHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK--------DNIYMFLEYVQGGDLKSKIEACVKLSEETC   71 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~   71 (131)
                      ||++... ..+...+++.+|+.+|+.++|||++++++.+...        +..|+++|++.++.+.........+++..+
T Consensus        40 vK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~  119 (318)
T d3blha1          40 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI  119 (318)
T ss_dssp             EEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHH
T ss_pred             EEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHH
Confidence            3554422 2334556788999999999999999999998653        357999999987665555445557999999


Q ss_pred             HHHHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          72 KCIVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      +.++.|++.||.|+|++|++| ||||+|||++.++.+|++|||++.
T Consensus       120 ~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1         120 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceee
Confidence            999999999999999999999 999999999999999999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.6e-25  Score=148.73  Aligned_cols=116  Identities=21%  Similarity=0.225  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHcC---CCCCceeEEEEEEeC-----CeeEEeeeccCCCChHHHHHhc-cCCCHHHHHHHHHHHHHHHHH
Q psy2929          14 KYFANEVDNLKSL---SHPNIVTLYESVLWK-----DNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQIAMALQY   84 (131)
Q Consensus        14 ~~~~~e~~~l~~~---~h~~iv~l~~~~~~~-----~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~   84 (131)
                      ..+.+|+.+++.+   +||||+++++++...     ...++++|++.++.+....... ..+++..++.++.|++.||.|
T Consensus        52 ~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y  131 (305)
T d1blxa_          52 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF  131 (305)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence            3456677776654   899999999998642     3579999999886655444433 368999999999999999999


Q ss_pred             HHhccccc-cccccceEEecCCeeeccceeeee---ccccccCCCCCCC
Q psy2929          85 LHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE---NRQVRSGNVNGPF  129 (131)
Q Consensus        85 lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~---~~~~~~~~~gtp~  129 (131)
                      +|+++++| ||||+|||++..+.+|++|||++.   .........|||.
T Consensus       132 LH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~  180 (305)
T d1blxa_         132 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW  180 (305)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCT
T ss_pred             HHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChh
Confidence            99999999 999999999999999999999864   3344455667764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.4e-24  Score=147.74  Aligned_cols=113  Identities=21%  Similarity=0.334  Sum_probs=94.9

Q ss_pred             Ccccccc-ccHHHHHHHHHHHHHHHcCCCCCceeEEEEEEeC------CeeEEeeeccCCCChHHHHHhccCCCHHHHHH
Q psy2929           1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWK------DNIYMFLEYVQGGDLKSKIEACVKLSEETCKC   73 (131)
Q Consensus         1 vk~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~   73 (131)
                      ||++.+. .+....+.+.+|+.+++.++||||+++++++...      ...|++|||+.+ ++.+.+.  ..+++..++.
T Consensus        47 vK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~--~~~~~~~i~~  123 (355)
T d2b1pa1          47 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSY  123 (355)
T ss_dssp             EEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHH
T ss_pred             EEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccch-HHHHhhh--cCCCHHHHHH
Confidence            4555533 3456667899999999999999999999999643      578999999976 5555443  3689999999


Q ss_pred             HHHHHHHHHHHHHhccccc-cccccceEEecCCeeeccceeeee
Q psy2929          74 IVYQIAMALQYLHSLMSVN-QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        74 ~~~~~~~~l~~lh~~~~~h-dlk~~nili~~~~~~kl~df~~~~  116 (131)
                      ++.|++.|+.|+|++|++| ||||+|||++.++.++++|||+..
T Consensus       124 ~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1         124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             HHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhh
Confidence            9999999999999999999 999999999999999999998764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.86  E-value=3.3e-21  Score=129.63  Aligned_cols=102  Identities=17%  Similarity=0.171  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      +.+++|.+.++.+. |++++.+++.+.+....++|||++ +++|.+++...+ .++......++.|++.||.|+|++|++
T Consensus        45 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~gii  123 (293)
T d1csna_          45 PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV  123 (293)
T ss_dssp             CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCce
Confidence            44778899999996 589999999999999999999998 679999987654 699999999999999999999999999


Q ss_pred             c-cccccceEEec-----CCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKV-----GSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~-----~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.     .+.+|++|||++.
T Consensus       124 HrDiKp~Nili~~~~~~~~~~vkl~DFG~a~  154 (293)
T d1csna_         124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  154 (293)
T ss_dssp             CCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             eccCCccceeecCcccccCCceEEcccceeE
Confidence            9 99999999974     5789999999875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=7.6e-21  Score=128.00  Aligned_cols=102  Identities=19%  Similarity=0.144  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHcCCCCC-ceeEEEEEEeCCeeEEeeeccCCCChHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcccc
Q psy2929          14 KYFANEVDNLKSLSHPN-IVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVYQIAMALQYLHSLMSV   91 (131)
Q Consensus        14 ~~~~~e~~~l~~~~h~~-iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~~~   91 (131)
                      +.+.+|+++++.++|++ |+.+.+.+.+.+..++|||++ ++++...+.. ...++...+..++.|++.||.|+|++|++
T Consensus        47 ~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii  125 (299)
T d1ckia_          47 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  125 (299)
T ss_dssp             CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCee
Confidence            35788999999997655 555667777888899999999 4576666654 44799999999999999999999999999


Q ss_pred             c-cccccceEEec---CCeeeccceeeee
Q psy2929          92 N-QHKPRYIAWKV---GSILAGGKLYFIE  116 (131)
Q Consensus        92 h-dlk~~nili~~---~~~~kl~df~~~~  116 (131)
                      | ||||+|||++.   +..++++|||++.
T Consensus       126 HrDiKp~NIl~~~~~~~~~vkl~DFG~a~  154 (299)
T d1ckia_         126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK  154 (299)
T ss_dssp             CSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred             eccCCHhhccccccCCCceeeeeccCcce
Confidence            9 99999999864   4569999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=3.8e-17  Score=112.07  Aligned_cols=119  Identities=15%  Similarity=0.175  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHcCC-----------CCCceeEEEEEEeC--CeeEEeeeccCCCC-hHHHHHh--ccCCCHHHHHH
Q psy2929          10 KENRKYFANEVDNLKSLS-----------HPNIVTLYESVLWK--DNIYMFLEYVQGGD-LKSKIEA--CVKLSEETCKC   73 (131)
Q Consensus        10 ~~~~~~~~~e~~~l~~~~-----------h~~iv~l~~~~~~~--~~~~lv~e~~~~~~-l~~~~~~--~~~~~~~~~~~   73 (131)
                      ....+.+.+|+.+++.++           |+||+++++++..+  ...++++++...+. .......  ...+.+..+..
T Consensus        50 ~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  129 (362)
T d1q8ya_          50 KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ  129 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHH
Confidence            334566788998888764           57899999888654  44555655554433 3332322  23688999999


Q ss_pred             HHHHHHHHHHHHHh-ccccc-cccccceEEecCC------eeeccceeeee-ccccccCCCCCC
Q psy2929          74 IVYQIAMALQYLHS-LMSVN-QHKPRYIAWKVGS------ILAGGKLYFIE-NRQVRSGNVNGP  128 (131)
Q Consensus        74 ~~~~~~~~l~~lh~-~~~~h-dlk~~nili~~~~------~~kl~df~~~~-~~~~~~~~~gtp  128 (131)
                      ++.|++.|+.|+|+ .|++| ||||+|||++.++      .++++|||.+. ........+|||
T Consensus       130 i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~  193 (362)
T d1q8ya_         130 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR  193 (362)
T ss_dssp             HHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCG
T ss_pred             HHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccc
Confidence            99999999999998 89999 9999999998765      48999999865 222333444555

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.69  E-value=2.3e-17  Score=104.35  Aligned_cols=92  Identities=11%  Similarity=-0.017  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHcCCCCCceeEEEEEEeCCeeEEeeeccCCCChHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhccccc
Q psy2929          13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVN   92 (131)
Q Consensus        13 ~~~~~~e~~~l~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h   92 (131)
                      .....+|...+..+.|++++..++..    ..+++||++++..+.+       ++......++.|++.++.++|++|++|
T Consensus        58 ~~~~~~e~~~l~~l~~~~v~~~~~~~----~~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiH  126 (191)
T d1zara2          58 IRSARNEFRALQKLQGLAVPKVYAWE----GNAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVH  126 (191)
T ss_dssp             HHHHHHHHHHHHHTTTSSSCCEEEEE----TTEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHHccCCCcceEEEec----CCEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEE
Confidence            34456789999999999999887653    2379999998754432       344455678999999999999999999


Q ss_pred             -cccccceEEecCCeeeccceeeee
Q psy2929          93 -QHKPRYIAWKVGSILAGGKLYFIE  116 (131)
Q Consensus        93 -dlk~~nili~~~~~~kl~df~~~~  116 (131)
                       ||||+|||++++ .++++|||.+.
T Consensus       127 rDiKP~NILv~~~-~~~liDFG~a~  150 (191)
T d1zara2         127 GDLSQYNVLVSEE-GIWIIDFPQSV  150 (191)
T ss_dssp             SCCSTTSEEEETT-EEEECCCTTCE
T ss_pred             ccCChhheeeeCC-CEEEEECCCcc
Confidence             999999999865 48889999663

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.68  E-value=9.3e-05  Score=47.18  Aligned_cols=44  Identities=9%  Similarity=-0.036  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCCChHH
Q psy2929          15 YFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKS   58 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~l~~   58 (131)
                      .+.+|...++.+. +--++++.......+..|++|++++|.++.+
T Consensus        55 ~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~   99 (263)
T d1j7la_          55 DVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE   99 (263)
T ss_dssp             CHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred             hHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccc
Confidence            4667888877663 4446777777778888999999998876644

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.38  E-value=0.0002  Score=45.39  Aligned_cols=43  Identities=21%  Similarity=0.247  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHcCC--CCCceeEEEEEEeCCeeEEeeeccCCCCh
Q psy2929          14 KYFANEVDNLKSLS--HPNIVTLYESVLWKDNIYMFLEYVQGGDL   56 (131)
Q Consensus        14 ~~~~~e~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~e~~~~~~l   56 (131)
                      ..+.+|...++.+.  .-.+++++....+.+..|+++++++|.++
T Consensus        49 ~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          49 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            34667777777652  33467788888888889999999987554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.35  E-value=0.0058  Score=41.29  Aligned_cols=24  Identities=4%  Similarity=-0.281  Sum_probs=20.5

Q ss_pred             cccc-cccccceEEecCCeeecccee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLY  113 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~  113 (131)
                      .++| |+.|.|||++.++ +++.|+-
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E  248 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPE  248 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCT
T ss_pred             ceeccCCcCCceeEcCCc-eEEechh
Confidence            5899 9999999998764 7889983

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.86  E-value=0.0041  Score=40.48  Aligned_cols=28  Identities=7%  Similarity=0.008  Sum_probs=24.3

Q ss_pred             ccccc-cccccceEEecCCeeeccceeee
Q psy2929          88 LMSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        88 ~~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      .|++| |+.++|++++.+...-+.||+.+
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFA  211 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             cccccCCcchhhhhcccccceeEeccccc
Confidence            38999 99999999998887789999644

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=89.74  E-value=0.21  Score=32.40  Aligned_cols=25  Identities=12%  Similarity=0.076  Sum_probs=19.5

Q ss_pred             cccc-cccccceEEecCCeeeccceeee
Q psy2929          89 MSVN-QHKPRYIAWKVGSILAGGKLYFI  115 (131)
Q Consensus        89 ~~~h-dlk~~nili~~~~~~kl~df~~~  115 (131)
                      +++| |+.|.|||++. +. .+.||+.+
T Consensus       193 ~liHgDlh~~NvL~~~-~~-~~IDFdd~  218 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD-GP-MFVDLDDA  218 (325)
T ss_dssp             EECCSSCSGGGEEESS-SE-EECCCTTC
T ss_pred             eeecCCCCcccEEEeC-Cc-eEEechhc
Confidence            7899 99999999964 33 46898543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=81.05  E-value=0.27  Score=32.69  Aligned_cols=36  Identities=19%  Similarity=0.072  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHcCC-CCCceeEEEEEEeCCeeEEeeeccCCC
Q psy2929          15 YFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGG   54 (131)
Q Consensus        15 ~~~~e~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~e~~~~~   54 (131)
                      ...+|..+++.+. +.-.+++++.+.  +  .+++||++|.
T Consensus        90 dr~~E~~i~~~ls~~gl~Pkll~~~~--~--g~I~efi~g~  126 (395)
T d1nw1a_          90 HLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEYIPSR  126 (395)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECCCCEE
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEcC--C--ceEEEEeccc
Confidence            4557888888774 433456666653  2  5788888764