Diaphorina citri psyllid: psy3001

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600--
MLANGSIRASKGLHLVVLRNILHSCMSFFDTTPVGRMISRFSQDVETVDSNLPTFLRSWINCLFSVLYLMPVTITVFFYGFVISLGTLFAAKRLHEKLLKSMLRWSPLFFDTTPVGRVLSRFSSDVNTLDNKLTLSVQQTLSQPFKITQTLNWLVRMTSDVETNIVAVERIKEYGETPQEAEWVNDKKPKDEWPEKGEVEFKDYKVRYREGLELVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQVLATIFVICYSTPVFIFVIVPVSVLYFFIQVSLIFTEDVKPLIITPFCSNLQRFYVATSRQLKRLESVSRSPIYSHFGETVTGNVGQRQLICLARALLRKTKILILDEATAAIDLETDDLIQSTIRSEFAHCTVLTIAHRLNTIIDSDRVLVLDKGLVVEFDSPSVLMKNKASIFYSMAKDAGLAWLAVRLETVGNLITFSAALLAVLSKETLNAGLVGLSVSYAMQVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQDPVLFSGTLRLNLDPVGESSDEAIWKALELAHLNTFVSNLPARLQHEVSEGGENL
cHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEEccccccEEEEccccccHHHHHHHHHHHcccccccEEEcccccccccHHHHccccEEEccccccccccccccccccccccccccccccccccHHHHccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccccEEEHHHHccccccccccEEEEEccEEEEcccHHHHHcccccHHHHHHHHccccccccccccccccEEEEEcEEEEEcccccccEEEEEEEEcccEEEEEccccccHHHHHHHHHHHcccccccEEEcccccccccHHHHHccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHccccccccccccccccc
MLANGSIRASKGLHLVVLRNILHSCMSFFDTTPVGRMISRFSQDVETVDSNLPTFLRSWINCLFSVLYLMPVTITVFFYGFVISLGTLFAAKRLHEKLLKSMLRWSPLFFDTTPVGRVLSRFSSDVNTLDNKLTLSVQQTLSQPFKITQTLNWLVRMTSDVETNIVAVERIKEYGETPQEA***********WPEKGEVEFKDYKVRYREGLELVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQVLATIFVICYSTPVFIFVIVPVSVLYFFIQVSLIFTEDVKPLIITPFCSNLQRFYVATSRQLKRLESVSRSPIYSHFGETVTGNVGQRQLICLARALLRKTKILILDEATAAIDLETDDLIQSTIRSEFAHCTVLTIAHRLNTIIDSDRVLVLDKGLVVEFDSPSVLMKNKASIFYSMAKDAGLAWLAVRLETVGNLITFSAALLAVLSKETLNAGLVGLSVSYAMQVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQDPVLFSGTLRLNLDPVGESSDEAIWKALELAHLNTFVSNLPARLQHEVSEG****
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MLANGSIRASKGLHLVVLRNILHSCMSFFDTTPVGRMISRFSQDVETVDSNLPTFLRSWINCLFSVLYLMPVTITVFFYGFVISLGTLFAAKRLHEKLLKSMLRWSPLFFDTTPVGRVLSRFSSDVNTLDNKLTLSVQQTLSQPFKITQTLNWLVRMTSDVETNIVAVERIKEYGETPQEAEWVNDKKPKDEWPEKGEVEFKDYKVRYREGLELVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQVLATIFVICYSTPVFIFVIVPVSVLYFFIQVSLIFTEDVKPLIITPFCSNLQRFYVATSRQLKRLESVSRSPIYSHFGETVTGNVGQRQLICLARALLRKTKILILDEATAAIDLETDDLIQSTIRSEFAHCTVLTIAHRLNTIIDSDRVLVLDKGLVVEFDSPSVLMKNKASIFYSMAKDAGLAWLAVRLETVGNLITFSAALLAVLSKETLNAGLVGLSVSYAMQVGIVGRTGAGKSSLTLALFRIIEPADGTIIIDGVDIRTLGLHTLRSRLTIIPQDPVLFSGTLRLNLDPVGESSDEAIWKALELAHLNTFVSNLPARLQHEVSEGGENL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005774 [CC]vacuolar membraneprobableGO:0005737, GO:0005575, GO:0031090, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3G5U, chain A
Confidence level:very confident
Coverage over the Query: 3-268,280-283,297-437
View the alignment between query and template
View the model in PyMOL
Template: 3QF4, chain B
Confidence level:very confident
Coverage over the Query: 482-602
View the alignment between query and template
View the model in PyMOL
Template: 1YQT, chain A
Confidence level:very confident
Coverage over the Query: 199-283,303-526,540-590
View the alignment between query and template
View the model in PyMOL