Diaphorina citri psyllid: psy3053

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------
MSTDVTVHRSENQIFSLLLLEPGEFYFDDLSVVLILTNKKNEEEERRPGRLKLCSKSLVFDPKNLALPLIKIPLKECTSLSKFEPPLTSKLNGNILDVTCTAYIEMLADVCLVSIEQLHRAASLPAAEQNQMVATIATARQSKVSFNLSWLEDLYEKVILETFGNKITPLVVNPGRIVLSSTNLYFQPFNNIEPHKLLKVRLAGIKRIIRRRFLLQQVGIEIYFKDLEPVKYLYLTLKTQGARDTLYNALLDLPELQLSHSDQEIMTLRWQNGALSNYDYLMYLNSLADRSLNDLTQYPVFPWVISNYTCDTLDLSDSNNYRDLSKPIGALNPTRLERLKERYNEMPHPKFLYGSHYSTPGFVLFYLVRKFPQYMLCLQNGRFDHPDRMFNSIPDIWRNVLTNMSDFKELVPEFYDTEQKGDFLENSYGIHFGYRYDGTKVGGVQLPPWAECPEVFVTKLRQALESDIVSRQLHLWIDLIFGYKQRGVEAEKADNLFYYLCYEGSVNLDMVQDWNQRHALEVQIMEFGQIPKQIFHSPHPRRTLTSQSSLLKHSTILSDVSNSWCDKSILEPLHFCHSHKEAITAVAICGEGISVASVGRDAMLKIHSLKTGRQERSAVLSSMTLSSLCILPDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGSWDCTVRVWNTGASWSHMKPSKSLVSQLDLDNRIKCLAISKDNNQLAVGTEAGELIIWSLENHLMTQQLSDDINASVNGVLFSEDGCRVLSCGNNCMLNVYDLTTGMQVCNKVFEEKLLCLSWAGEEKVILGGALGMVYLVDLIQVQLLKQVRAHKDAVLSLHFDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGNLVGAPKLYATEFYLLYVLTV
cccccccccccccccEEcccccccEEEEEEEEEEEEcccccccccEEccEEEEEcccEEEccccccccEEEEccccccccccccccccccccccEEEEEEHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEEEcEEEEEEEEEEccEEEEECcccccccEEEEEEcccHHHHHHHcccccccEEEEEEEcccccEEEEcccccHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccCEEEEccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHccccccHHHHHHccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccCEcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHccccccEEEEcccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccCECcccccccEEEEEcccccEEEEEccccEEEEcccccccccccccccccccccEEEcccccEEEEEECccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEECccccEEEEEcccccccccccccEEEEccccccEEEEEEcccccEEEEECcccEEEEEEccccEEEEEEccccccccEEEEECccccEEEEEccccEEEEEEccccEEEEEEEEcccEEEEEEEcccEEEEEccccEEEEEEcccEEEEEEcccccccEEEEEEcccEEEEECcccEEEEEEEcccEEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccEEEEEEEc
***********NQIFSLLLLEPGEFYFDDLSVVLILTN************LKLCSKSLVFDPKNLALPLIKIPLKECTSLSKFEPPLTSKLNGNILDVTCTAYIEMLADVCLVSIEQLHRAASLPAAEQNQMVATIATARQSKVSFNLSWLEDLYEKVILETFGNKITPLVVNPGRIVLSSTNLYFQPFNNIEPHKLLKVRLAGIKRIIRRRFLLQQVGIEIYFKDLEPVKYLYLTLKTQGARDTLYNALLDLPELQLSHSDQEIMTLRWQNGALSNYDYLMYLNSLADRSLNDLTQYPVFPWVISNYTCDTLDLSDSNNYRDLSKPIGALNPTRLERLKERYNEMPHPKFLYGSHYSTPGFVLFYLVRKFPQYMLCLQNGRFDHPDRMFNSIPDIWRNVLTNMSDFKELVPEFYDTEQKGDFLENSYGIHFGYRYDGTKVGGVQLPPWAECPEVFVTKLRQALESDIVSRQLHLWIDLIFGYKQRGVEAEKADNLFYYLCYEGSVNLDMVQDWNQRHALEVQIMEFGQIPKQIFHSPHP*************STILSDVSNSWCDKSILEPLHFCHSHKEAITAVAICGEGISVASVGRDAMLKIHSLKTGRQERSAVLSSMTLSSLCILPDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGSWDCTVRVWNTGASWSHMKPSKSLVSQLDLDNRIKCLAISKDNNQLAVGTEAGELIIWSLENHLMTQQLSDDINASVNGVLFSEDGCRVLSCGNNCMLNVYDLTTGMQVCNKVFEEKLLCLSWAGEEKVILGGALGMVYLVDLIQVQLLKQVRAHKDAVLSLHFDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGNLVGAPKLYATEFYLLYVLTV
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MSTDVTVHRSENQIFSLLLLEPGEFYFDDLSVVLILTNKKNEEEERRPGRLKLCSKSLVFDPKNLALPLIKIPLKECTSLSKFEPPLTSKLNGNILDVTCTAYIEMLADVCLVSIEQLHRAASLPAAEQNQMVATIATARQSKVSFNLSWLEDLYEKVILETFGNKITPLVVNPGRIVLSSTNLYFQPFNNIEPHKLLKVRLAGIKRIIRRRFLLQQVGIEIYFKDLEPVKYLYLTLKTQGARDTLYNALLDLPELQLSHSDQEIMTLRWQNGALSNYDYLMYLNSLADRSLNDLTQYPVFPWVISNYTCDTLDLSDSNNYRDLSKPIGALNPTRLERLKERYNEMPHPKFLYGSHYSTPGFVLFYLVRKFPQYMLCLQNGRFDHPDRMFNSIPDIWRNVLTNMSDFKELVPEFYDTEQKGDFLENSYGIHFGYRYDGTKVGGVQLPPWAECPEVFVTKLRQALESDIVSRQLHLWIDLIFGYKQRGVEAEKADNLFYYLCYEGSVNLDMVQDWNQRHALEVQIMEFGQIPKQIFHSPHPRRTLTSQSSLLKHSTILSDVSNSWCDKSILEPLHFCHSHKEAITAVAICGEGISVASVGRDAMLKIHSLKTGRQERSAVLSSMTLSSLCILPDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGSWDCTVRVWNTGASWSHMKPSKSLVSQLDLDNRIKCLAISKDNNQLAVGTEAGELIIWSLENHLMTQQLSDDINASVNGVLFSEDGCRVLSCGNNCMLNVYDLTTGMQVCNKVFEEKLLCLSWAGEEKVILGGALGMVYLVDLIQVQLLKQVRAHKDAVLSLHFDNCTMLVGCWDSCVVIYDVECGRIVTELAGHEDAISCVAWDEKRKRLISGNLVGAPKLYATEFYLLYVLTV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein FAN Couples the p55 TNF-receptor (TNF-R55 / TNFR1) to neutral sphingomyelinase (N-SMASE). Specifically binds to the N-smase activation domain of TNF-R55. May regulate ceramide production by N-SMASE.confidentO35242
Protein FAN Couples the p55 TNF-receptor (TNF-R55 / TNFR1) to neutral sphingomyelinase (N-SMASE). Specifically binds to the N-smase activation domain of TNF-R55. May regulate ceramide production by N-SMASE.confidentQ92636

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0007165 [BP]signal transductionprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005057 [MF]receptor signaling protein activityprobableGO:0060089, GO:0003674, GO:0004871
GO:0006672 [BP]ceramide metabolic processprobableGO:0044238, GO:0044710, GO:1901564, GO:0006643, GO:0009987, GO:0044237, GO:0071704, GO:0006807, GO:0008150, GO:0008152, GO:0044255, GO:0006665, GO:0006629
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1T77, chain A
Confidence level:very confident
Coverage over the Query: 157-542
View the alignment between query and template
View the model in PyMOL
Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 562-916
View the alignment between query and template
View the model in PyMOL
Template: 3ZEY, chain 7
Confidence level:probable
Coverage over the Query: 548-786
View the alignment between query and template
View the model in PyMOL