Diaphorina citri psyllid: psy3055


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
MGRNNKHGPISKLSIDERTVLTIGEIIQELLVAHKECKDVNLNQMKTRISSKYGLDTSPRLVDIIAAVPAEAKKILLPKLKAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQTRHRVEQLQQLGHSVDKEWEHVITTGNLAMNWMAPTCPSLWFQINLLSRTQWKKCNQGEHLNDRSIST
ccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHHHHccccccccccEEEEEECccccccccccccccEEEccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccHHHHHHHHHHHcccccccccccccccccccc
**************IDERTVLTIGEIIQELLVAHKECKDVNLNQMKTRISSKYGLDTSPRLVDIIAAVPAEAKKILLPKLKAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQTRHRVEQLQQLGHSVDKEWEHVITTGNLAMNWMAPTCPSLWFQINLLSRTQWKKC*************
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MGRNNKHGPISKLSIDERTVLTIGEIIQELLVAHKECKDVNLNQMKTRISSKYGLDTSPRLVDIIAAVPAEAKKILLPKLKAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQTRHRVEQLQQLGHSVDKEWEHVITTGNLAMNWMAPTCPSLWFQINLLSRTQWKKCNQGEHLNDRSIST

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable elongator complex protein 3 Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling. May also have a methyltransferase activity.confidentQ23651
Elongator complex protein 3 Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling. May also have a methyltransferase activity.confidentQ6NVL5
Elongator complex protein 3 Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling and is involved in acetylation of histones H3 and probably H4. May also have a methyltransferase activity.confidentQ9CZX0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0018394 [BP]peptidyl-lysine acetylationprobableGO:0071704, GO:0043543, GO:0044238, GO:0044260, GO:0044267, GO:0018205, GO:0044237, GO:0006473, GO:0009987, GO:0006464, GO:0043170, GO:0019538, GO:0043412, GO:0036211, GO:0008150, GO:0018193, GO:0008152
GO:0033588 [CC]Elongator holoenzyme complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0045202 [CC]synapseprobableGO:0005575
GO:0051124 [BP]synaptic growth at neuromuscular junctionprobableGO:0050808, GO:0048589, GO:0030154, GO:0048468, GO:0014706, GO:0022607, GO:0051146, GO:0061061, GO:0007275, GO:0044699, GO:0007517, GO:0040007, GO:0048869, GO:0071840, GO:0007519, GO:0016043, GO:0048513, GO:0007416, GO:0032502, GO:0055001, GO:0055002, GO:0032501, GO:0048741, GO:0009987, GO:0009888, GO:0048747, GO:0044767, GO:0044763, GO:0048731, GO:0007528, GO:0044707, GO:0007399, GO:0048856, GO:0044085, GO:0060537, GO:0060538, GO:0008150, GO:0042692
GO:0016591 [CC]DNA-directed RNA polymerase II, holoenzymeprobableGO:0030880, GO:0000428, GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0055029, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045494 [BP]photoreceptor cell maintenanceprobableGO:0032501, GO:0044707, GO:0043954, GO:0071840, GO:0009987, GO:0007601, GO:0007600, GO:0050953, GO:0044763, GO:0016043, GO:0050877, GO:0008150, GO:0044699, GO:0003008
GO:0003677 [MF]DNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0005719 [CC]nuclear euchromatinprobableGO:0031974, GO:0043229, GO:0043228, GO:0000785, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0044454, GO:0005694, GO:0000790, GO:0000791, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044427, GO:0044422
GO:0008080 [MF]N-acetyltransferase activityprobableGO:0016740, GO:0003824, GO:0016407, GO:0016746, GO:0016747, GO:0016410, GO:0003674
GO:0006368 [BP]transcription elongation from RNA polymerase II promoterprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0006366, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006354, GO:0006351, GO:0019438
GO:0007626 [BP]locomotory behaviorprobableGO:0044708, GO:0050896, GO:0008150, GO:0007610
GO:0048789 [BP]cytoskeletal matrix organization at active zoneprobableGO:0006996, GO:0007010, GO:0071840, GO:0009987, GO:0016043, GO:0044763, GO:0030865, GO:0008150, GO:0044699
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0009653 [BP]anatomical structure morphogenesisprobableGO:0032502, GO:0048856, GO:0008150
GO:0008023 [CC]transcription elongation factor complexprobableGO:0043234, GO:0044446, GO:0032991, GO:0005575, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0008607 [MF]phosphorylase kinase regulator activityprobableGO:0030234, GO:0003674, GO:0019207, GO:0019887
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0030335 [BP]positive regulation of cell migrationprobableGO:0051272, GO:0030334, GO:0040017, GO:0040012, GO:0008150, GO:0051270, GO:2000145, GO:2000147, GO:0048518, GO:0065007, GO:0032879, GO:0050794, GO:0050789, GO:0048522
GO:0030431 [BP]sleepprobableGO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0002098 [BP]tRNA wobble uridine modificationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0008033, GO:0009987, GO:0006725, GO:0002097, GO:0043412, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0006396

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OLT, chain A
Confidence level:probable
Coverage over the Query: 151-200
View the alignment between query and template
View the model in PyMOL