Diaphorina citri psyllid: psy3123

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MMEDELPILKSILKGNARYHNAPVRFGRVPKREKARILAAMQQSTNTKCTEKALAAELDDEQRMLSTVVRAHLDTCAFTADKIEPMLRRAREHPTYTACPSTLACPLNPNSHPLQGQQELLQDFSERFSPTIRDVVEFAKRIPGFSLLCHDDQVTLLKAGVFEVLLVRLACMFDSQTNSMICLNGEVLVRDSIHSSNARFLMDSMFDFAERLNGLHLSDTEIGLFSSIVVISPSRSGLRNKELVERMRGKLENMLMHVLNQNHPEQMNLCAELISMLPDLRTLNQLHSEKLVAFQMTEQQQQLAAQQQQWHGEDNSKSPTGSSWSDVTMEEVKSPLGSVSSTESVCSNEVATLNEYTSTHAQNAPLLAATLAGAQCPHRNRANSGSTTDGDRRFRKLDSPTDSGIESGTEKIEKHASAPTSVCSSPRSSFEEKDFNHVEDMPVLKRILQAPPLDTSSLMDEAYKPHKKFRALRQKDSAEAEPLHPSLASSHSMLAKSLMEGPRMTPDQLKRTEIVHNYIMRTDSPPSAYFPRSWHSSSVIKPAPPATVTSNALLELQVAATSQPLNLSKKTPPPSPRLSVVSLEA
cccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEECcccEEEEHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHcccccccHHHHccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***DELPILKSILKGNARYHNAPVRFGR**********************************RMLSTVVRAHLDTCAFTADKIEPMLRRAREHPTYTACPSTLACP*************LLQDFSERFSPTIRDVVEFAKRIPGFSLLCHDDQVTLLKAGVFEVLLVRLACMFDSQTNSMICLNGEVLVRDSIHSSNARFLMDSMFDFAERLNGLHLSDTEIGLFSSIVVISPSRSGLRNKELVERMRGKLENMLMHVLNQNHPEQMNLCAELISMLPDLRTLNQLHSEKLVAFQMTEQQQQLAAQQ************************************************************AATL**********************************************************************PVLKRILQAPPLDTSSLMDEAYKPHK*********************************************EIVHNYIM*****************************************************************
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MMEDELPILKSILKGNARYHNAPVRFGRVPKREKARILAAMQQSTNTKCTEKALAAELDDEQRMLSTVVRAHLDTCAFTADKIEPMLRRAREHPTYTACPSTLACPLNPNSHPLQGQQELLQDFSERFSPTIRDVVEFAKRIPGFSLLCHDDQVTLLKAGVFEVLLVRLACMFDSQTNSMICLNGEVLVRDSIHSSNARFLMDSMFDFAERLNGLHLSDTEIGLFSSIVVISPSRSGLRNKELVERMRGKLENMLMHVLNQNHPEQMNLCAELISMLPDLRTLNQLHSEKLVAFQMTEQQQQLAAQQQQWHGEDNSKSPTGSSWSDVTMEEVKSPLGSVSSTESVCSNEVATLNEYTSTHAQNAPLLAATLAGAQCPHRNRANSGSTTDGDRRFRKLDSPTDSGIESGTEKIEKHASAPTSVCSSPRSSFEEKDFNHVEDMPVLKRILQAPPLDTSSLMDEAYKPHKKFRALRQKDSAEAEPLHPSLASSHSMLAKSLMEGPRMTPDQLKRTEIVHNYIMRTDSPPSAYFPRSWHSSSVIKPAPPATVTSNALLELQVAATSQPLNLSKKTPPPSPRLSVVSLEA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0020037 [MF]heme bindingprobableGO:0005488, GO:0097159, GO:0003674, GO:1901363, GO:0046906
GO:0003677 [MF]DNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0038023 [MF]signaling receptor activityprobableGO:0060089, GO:0003674, GO:0004872, GO:0004871
GO:1901700 [BP]response to oxygen-containing compoundprobableGO:0042221, GO:0050896, GO:0008150
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0030522 [BP]intracellular receptor mediated signaling pathwayprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0033993 [BP]response to lipidprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0010628 [BP]positive regulation of gene expressionprobableGO:0009893, GO:0019222, GO:0060255, GO:0050789, GO:0065007, GO:0048518, GO:0008150, GO:0010468, GO:0010604

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CQV, chain A
Confidence level:very confident
Coverage over the Query: 103-295
View the alignment between query and template
View the model in PyMOL
Template: 1XDK, chain B
Confidence level:very confident
Coverage over the Query: 59-83,94-314
View the alignment between query and template
View the model in PyMOL
Template: 3DZY, chain D
Confidence level:very confident
Coverage over the Query: 17-100,115-312
View the alignment between query and template
View the model in PyMOL