Diaphorina citri psyllid: psy3157

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820--
MCNGRESLKGEAILHSASSDSETKSGLESSFIVHFSRPGPRKLSIRINYRTSAKKLSDLRLKFKDNPDPESLLKLSKKGRTLMVFVSVDGDPTRDEAESITKLWQTSLFNSHIQAERYMVEDSRAIFLFKDGSQAWDAKDYLVQQERCKSVTIENKVYPGKLTKEIKSLLGQQERCKSVTIENKVYPGKLTKEVSVGLTIIPTFTMGSLTPHKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIHIDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTTRVVMMKSRRIQREMKR
cccccccccccEEEcccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEEcccEEEEEEccccccccHHHHHHcccccccEEEECcccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHcccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHcccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccEEEEEECccccccCEEEEEEHHHHHHHHHHHEEEECcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHc
******************************FIVHFSRPG****SIRINY***************************KKGRTLMVFVSVDGD*****AESITKLWQTSLFNSHIQAERYMVEDSRAIFLFKDGSQAWDAKDYLVQQERCKSVTIENKVYPGKLTKEIKSLLGQQERCKSVTIENK*********************MGSLTPHKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKY*****************PLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIV*******************I*******************************SFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIHIDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTTRVVMMKSR********
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MCNGRESLKGEAILHSASSDSETKSGLESSFIVHFSRPGPRKLSIRINYRTSAKKLSDLRLKFKDNPDPESLLKLSKKGRTLMVFVSVDGDPTRDEAESITKLWQTSLFNSHIQAERYMVEDSRAIFLFKDGSQAWDAKDYLVQQERCKSVTIENKVYPGKLTKEIKSLLGQQERCKSVTIENKVYPGKLTKEVSVGLTIIPTFTMGSLTPHKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIHIDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTTRVVMMKSRRIQREMKR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
LDLR chaperone boca Chaperone specifically assisting the folding of beta-propeller/EGF modules within the family of low-density lipoprotein receptors (LDLRs). Acts as a modulator of the Wg pathway, since some LDLRs are coreceptors for the canonical Wnt pathway.confidentQ8T9B6
LDLR chaperone MESD Chaperone specifically assisting the folding of beta-propeller/EGF modules within the family of low-density lipoprotein receptors (LDLRs). Acts as a modulator of the Wnt pathway through chaperoning the coreceptors of the canonical Wnt pathway, LRP5 and LRP6, to the plasma membrane. Essential for specification of embryonic polarity and mesoderm induction.confidentQ14696
LDLR chaperone MESD Chaperone specifically assisting the folding of beta-propeller/EGF modules within the family of low-density lipoprotein receptors (LDLRs). Acts as a modulator of the Wnt pathway through chaperoning the coreceptors of the canonical Wnt pathway, LRP5 and LRP6, to the plasma membrane. Essential for specification of embryonic polarity and mesoderm induction.confidentQ5U2R7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005788 [CC]endoplasmic reticulum lumenprobableGO:0005737, GO:0005575, GO:0005783, GO:0043233, GO:0044464, GO:0043229, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0005623, GO:0044424, GO:0044432, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0045177 [CC]apical part of cellprobableGO:0005575, GO:0044464, GO:0005623
GO:0048728 [BP]proboscis developmentprobableGO:0032502, GO:0032501, GO:0035213, GO:0044707, GO:0007444, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0032799 [BP]low-density lipoprotein receptor particle metabolic processprobableGO:0044260, GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152, GO:0043112
GO:0006612 [BP]protein targeting to membraneprobableGO:0033036, GO:0034613, GO:0046907, GO:0070727, GO:0006886, GO:0006810, GO:0006605, GO:0045184, GO:0044765, GO:0008104, GO:0008150, GO:0071702, GO:0015031, GO:0044763, GO:0009987, GO:0051234, GO:0051649, GO:0051179, GO:0044699, GO:0051641
GO:0006888 [BP]ER to Golgi vesicle-mediated transportprobableGO:0051234, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0009987, GO:0051641, GO:0051179, GO:0044699, GO:0016482
GO:0048477 [BP]oogenesisprobableGO:0044702, GO:0048609, GO:0032504, GO:0019953, GO:0007292, GO:0022414, GO:0032501, GO:0008150, GO:0044699, GO:0007276, GO:0000003
GO:0034394 [BP]protein localization to cell surfaceprobableGO:0008104, GO:0070727, GO:0034613, GO:0044763, GO:0008150, GO:0009987, GO:0033036, GO:0051179, GO:0044699, GO:0051641
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2KGL, chain A
Confidence level:very confident
Coverage over the Query: 54-162
View the alignment between query and template
View the model in PyMOL
Template: 2CFQ, chain A
Confidence level:very confident
Coverage over the Query: 234-378
View the alignment between query and template
View the model in PyMOL
Template: 1PW4, chain A
Confidence level:confident
Coverage over the Query: 213-401,566-694,726,740-806
View the alignment between query and template
View the model in PyMOL