Diaphorina citri psyllid: psy3174


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
MSSTADNEVDELFDVRNSYYLGNYQQCIKEGQRLKATDPKVLLEKDFYVCRSYLAQKKYKVVLEEKLPEELSCIKVLAEYLSIPSKNGSSNFGTHLEINALKIHTYLTMYRNDLALKELKVMQDKDEDHTLTQLCSAWVHIANNVDKLNEAFYTLQDLIDKYGSTPMLVNAQVAVLIAQDKYEEAWDLLQDTAGDSEDTLINNMVTAGRLGKGNEMSVSPPFLFRSDETTATLDACGLQSNSESTPRDSGERKISAELPGESQGL
cccccccccccHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHcccccccccc
**********ELFDVRNSYYLGNYQQCIKEGQRLKATDPKVLLEKDFYVCRSYLAQKKYKVVLEEKLPEELSCIKVLAEYLSIPSKNGSSNFGTHLEINALKIHTYLTMYRNDLALKELKVMQDKDEDHTLTQLCSAWVHIANNVDKLNEAFYTLQDLIDKYGSTPMLVNAQVAVLIAQDKYEEAWDLLQDTAGDSEDTLINNMVTAGRLGKGN*MSVSPPFLFRSDETTATLDACGL********************P******
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MSSTADNEVDELFDVRNSYYLGNYQQCIKEGQRLKATDPKVLLEKDFYVCRSYLAQKKYKVVLEEKLPEELSCIKVLAEYLSIPSKNGSSNFGTHLEINALKIHTYLTMYRNDLALKELKVMQDKDEDHTLTQLCSAWVHIANNVDKLNEAFYTLQDLIDKYGSTPMLVNAQVAVLIAQDKYEEAWDLLQDTAGDSEDTLINNMVTAGRLGKGNEMSVSPPFLFRSDETTATLDACGLQSNSESTPRDSGERKISAELPGESQGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Coatomer subunit epsilon The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors.confidentQ28104
Coatomer subunit epsilon-2 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.confidentP0C541
Coatomer subunit epsilon The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors.confidentO89079

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0044446 [CC]intracellular organelle partprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MKR, chain A
Confidence level:very confident
Coverage over the Query: 10-243
View the alignment between query and template
View the model in PyMOL