Diaphorina citri psyllid: psy318


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MDGTTSDSSLPSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVPNRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEKKLHGIFKLLCSQENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNIKANDGTDANLKSNIFTVGTSCVNL
ccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccEEEEEccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccHHHHHHHHHHcEEEEcccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHccccccccccEEEEcccEEEEccccccEEEEEHHHHccccccHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEECcccHHHHccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHcccc
************KQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILAR*******PGVPNRLDVMKEEEEKERERERERERER**********KSYDPIPPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEKKLHGIFKLLCSQENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNEAVIDTHS***RMLMDDLNIK*******NLKSNIFTVGTSCVNL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDGTTSDSSLPSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVPNxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKSYDPIPPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEKKLHGIFKLLCSQENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNIKANDGTDANLKSNIFTVGTSCVNL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lactation elevated protein 1 confidentQ32PX9
Lactation elevated protein 1 confidentQ8WV93
Lactation elevated protein 1 confidentQ3V384

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4B4T, chain I
Confidence level:confident
Coverage over the Query: 61-112,170-261
View the alignment between query and template
View the model in PyMOL
Template: 2W58, chain A
Confidence level:confident
Coverage over the Query: 27-48,61-109,168-258
View the alignment between query and template
View the model in PyMOL
Template: 1G5T, chain A
Confidence level:probable
Coverage over the Query: 88-151,172-227
View the alignment between query and template
View the model in PyMOL
Template: 3CMW, chain A
Confidence level:probable
Coverage over the Query: 317-395
View the alignment between query and template
View the model in PyMOL
Template: 1IN4, chain A
Confidence level:probable
Coverage over the Query: 20-46,61-90
View the alignment between query and template
View the model in PyMOL
Template: 2ZPA, chain A
Confidence level:probable
Coverage over the Query: 178-374
View the alignment between query and template
View the model in PyMOL
Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 87-164
View the alignment between query and template
View the model in PyMOL