Diaphorina citri psyllid: psy3208


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MNPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSSCSQVSHAGPGLGANGLGAAPGLGSNGLGSGLGSNGLGSGLGSGPGEYYNDTEEQEDTEHTSSENLHKSDSF
ccccccEEEEEEEccccHHccccccccccEEEEEccEEcccccHHHHHHHHHcccccEEEEEEEccccccccccccccccccccccccccccccccccCEECcccccccccccccccccccccccccccccccccccccccccc
***NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP******************************************L***********************************
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MNPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSSCSQVSHAGPGLGANGLGAAPGLGSNGLGSGLGSNGLGSGLGSGPGEYYNDTEEQEDTEHTSSENLHKSDSF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Patj homolog Involved in cell polarity establishment. Probably participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex.confidentQ9NB04
Multiple PDZ domain protein Interacts with HTR2C and provokes its clustering at the cell surface (By similarity). Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses.confidentO75970
Multiple PDZ domain protein Interacts with HTR2C and provokes its clustering at the cell surface. Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses.confidentO55164

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0016327 [CC]apicolateral plasma membraneprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005912 [CC]adherens junctionprobableGO:0005575, GO:0070161, GO:0030054
GO:0032033 [MF]myosin II light chain bindingprobableGO:0032027, GO:0045159, GO:0008092, GO:0017022, GO:0003674, GO:0005488, GO:0005515
GO:0019226 [BP]transmission of nerve impulseprobableGO:0044700, GO:0032501, GO:0035637, GO:0044707, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007154, GO:0044699, GO:0003008
GO:0043025 [CC]neuronal cell bodyprobableGO:0005575, GO:0097458, GO:0044297, GO:0005623, GO:0044464
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0016323 [CC]basolateral plasma membraneprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005918 [CC]septate junctionprobableGO:0005575, GO:0070160, GO:0043296, GO:0030054, GO:0005911
GO:0044463 [CC]cell projection partprobableGO:0005575, GO:0042995, GO:0044464, GO:0005623
GO:0035088 [BP]establishment or maintenance of apical/basal cell polarityprobableGO:0061245, GO:0009987, GO:0007163, GO:0008150, GO:0044763, GO:0044699
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0005923 [CC]tight junctionprobableGO:0005575, GO:0070160, GO:0043296, GO:0030054, GO:0005911
GO:0060071 [BP]Wnt receptor signaling pathway, planar cell polarity pathwayprobableGO:0022603, GO:0023052, GO:0007165, GO:0007166, GO:0050789, GO:0044699, GO:0051716, GO:0065007, GO:0050793, GO:0009987, GO:0050794, GO:0044763, GO:0051239, GO:0007154, GO:0035567, GO:0044700, GO:0090175, GO:0050896, GO:0016055, GO:2000026, GO:2000027, GO:0008150
GO:0045494 [BP]photoreceptor cell maintenanceprobableGO:0032501, GO:0044707, GO:0043954, GO:0071840, GO:0009987, GO:0007601, GO:0007600, GO:0050953, GO:0044763, GO:0016043, GO:0050877, GO:0008150, GO:0044699, GO:0003008
GO:0016332 [BP]establishment or maintenance of polarity of embryonic epitheliumprobableGO:0048598, GO:0002009, GO:0016331, GO:0009987, GO:0044707, GO:0032501, GO:0060429, GO:0009888, GO:0044767, GO:0009790, GO:0007163, GO:0044763, GO:0048729, GO:0008150, GO:0009653, GO:0032502, GO:0007275, GO:0044699, GO:0048856
GO:0016334 [BP]establishment or maintenance of polarity of follicular epitheliumprobableGO:0016333, GO:0002009, GO:0009987, GO:0060429, GO:0009888, GO:0044767, GO:0007163, GO:0044763, GO:0048729, GO:0008150, GO:0009653, GO:0032502, GO:0044699, GO:0048856
GO:0034334 [BP]adherens junction maintenanceprobableGO:0009987, GO:0034332, GO:0034331, GO:0034330, GO:0016043, GO:0044763, GO:0071840, GO:0045216, GO:0043954, GO:0008150, GO:0044699
GO:0035509 [BP]negative regulation of myosin-light-chain-phosphatase activityprobableGO:0060191, GO:0032515, GO:0019222, GO:0010921, GO:0010923, GO:0031323, GO:0051004, GO:0019220, GO:0050789, GO:0051346, GO:0043086, GO:0065007, GO:0044092, GO:0065009, GO:0035507, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0035303, GO:0051336, GO:0043666
GO:0001736 [BP]establishment of planar polarityprobableGO:0032502, GO:0002009, GO:0048856, GO:0060429, GO:0009888, GO:0044767, GO:0001738, GO:0007164, GO:0048729, GO:0008150, GO:0009653, GO:0044699
GO:0043297 [BP]apical junction assemblyprobableGO:0022607, GO:0034330, GO:0016043, GO:0008150, GO:0044085, GO:0007043, GO:0071840, GO:0045216, GO:0044763, GO:0009987, GO:0034329, GO:0044699
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005938 [CC]cell cortexprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0071944, GO:0044424
GO:0009966 [BP]regulation of signal transductionprobableGO:0048583, GO:0050794, GO:0065007, GO:0023051, GO:0008150, GO:0010646, GO:0050789
GO:0007155 [BP]cell adhesionprobableGO:0008150, GO:0009987, GO:0022610, GO:0044763, GO:0044699
GO:0043220 [CC]Schmidt-Lanterman incisureprobableGO:0005575, GO:0043209, GO:0043218, GO:0044464, GO:0005623
GO:0005102 [MF]receptor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0005543 [MF]phospholipid bindingprobableGO:0043168, GO:0043167, GO:0003674, GO:0008289, GO:0005488
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0097060 [CC]synaptic membraneprobableGO:0005575, GO:0044456, GO:0016020, GO:0045202
GO:0005080 [MF]protein kinase C bindingprobableGO:0019899, GO:0019901, GO:0019900, GO:0003674, GO:0005488, GO:0005515
GO:0045196 [BP]establishment or maintenance of neuroblast polarityprobableGO:0055059, GO:0030154, GO:0055057, GO:0048103, GO:0007163, GO:0007405, GO:0051301, GO:0048869, GO:0007275, GO:0008150, GO:0044699, GO:0061351, GO:0032502, GO:0032501, GO:0008283, GO:0009987, GO:0044763, GO:0022008, GO:0017145, GO:0048699, GO:0045165, GO:0044707, GO:0007399, GO:0048856, GO:0048731, GO:0072089
GO:0045176 [BP]apical protein localizationprobableGO:0033036, GO:0008105, GO:0008104, GO:0008150, GO:0051179
GO:0008594 [BP]photoreceptor cell morphogenesisprobableGO:0032502, GO:0030154, GO:0048468, GO:0009653, GO:0007275, GO:0044699, GO:0042461, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0000904, GO:0044763, GO:0048731, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0048856, GO:0046530, GO:0008150
GO:0035209 [BP]pupal developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002165, GO:0008150, GO:0007275, GO:0044699
GO:0042391 [BP]regulation of membrane potentialprobableGO:0019725, GO:0050801, GO:0009987, GO:0006873, GO:0048878, GO:0042592, GO:0065007, GO:0044763, GO:0008150, GO:0055082, GO:0065008, GO:0044699
GO:0045893 [BP]positive regulation of transcription, DNA-dependentprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0009891, GO:2000112, GO:0019219, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0010556, GO:0048522
GO:0030136 [CC]clathrin-coated vesicleprobableGO:0043227, GO:0005737, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0005575, GO:0043229, GO:0044424, GO:0005622, GO:0030135, GO:0043226, GO:0031982

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GSL, chain A
Confidence level:very confident
Coverage over the Query: 5-68
View the alignment between query and template
View the model in PyMOL