Diaphorina citri psyllid: psy3233


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
MSIEKLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR
ccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcc
********DVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQ***********AAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR
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MSIEKLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043015 [MF]gamma-tubulin bindingprobableGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0005819 [CC]spindleprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RIP, chain A
Confidence level:confident
Coverage over the Query: 20-116
View the alignment between query and template
View the model in PyMOL