Diaphorina citri psyllid: psy3300


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE
ccHHHHHHHHccccccEEEEEEcccccccEEEEEEECcccccccEEEEEEEEcccCEEEECcccccccHHHHHHHcccccccccccccccccccccc
*IQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRY*****
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044422 [CC]organelle partprobableGO:0005575, GO:0043226
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0005925 [CC]focal adhesionprobableGO:0070161, GO:0005575, GO:0005912, GO:0005924, GO:0030054, GO:0030055
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0043229 [CC]intracellular organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0043226
GO:0043227 [CC]membrane-bounded organelleprobableGO:0005575, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2KNO, chain A
Confidence level:very confident
Coverage over the Query: 1-93
View the alignment between query and template
View the model in PyMOL