Psyllid ID: psy3300

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE
Secondary Structure (PSIPRED)
ccHHHHHHHHccccccEEEEEEcccccccEEEEEEEEcccccccEEEEEEEEcccEEEEEEcccccccHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccEEEEEEcccccccEEEEEEcccccccccEEEEEEEEccccEEEcccccccccHHHHHHHccccccccccccEccccccccc
Coil and Loop (DISEMBL)
MIQEITLevlsqepvgafmvresttkpgcfalslrvpkefhhLGIAHYLILRTAkgykikgfTKEFSSLTSLIthhsvmpellpctlslhrynpnfe
Flexible Loop (DISEMBL)
MIQEITlevlsqepvgAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHsvmpellpctlslhrynpnfe
Low Complexity Region (SEG)
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE
Disordered region (IsUnstruct)
********VL**EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRY*****
Disordered Region (DISOPRED)
*IQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSL*R******
Disordered Region (DISEMBL)
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE
Disordered Region (DISPRO)
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRY*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
Q8IZW8	715	Tensin-4 OS=Homo sapiens	yes	N/A	0.917	0.124	0.356	1e-09
Q32PJ7	716	Tensin-4 OS=Bos taurus GN	yes	N/A	0.876	0.118	0.381	3e-09
Q8BZ33	696	Tensin-4 OS=Mus musculus	yes	N/A	0.917	0.127	0.356	5e-09
Q5SSZ5	1440	Tensin-3 OS=Mus musculus	no	N/A	0.948	0.063	0.327	5e-08
Q4V8I3	718	Tensin-4 OS=Rattus norveg	no	N/A	0.917	0.123	0.326	9e-08
Q9GLM4	1715	Tensin-1 OS=Bos taurus GN	no	N/A	0.979	0.055	0.293	4e-07
Q68CZ2	1445	Tensin-3 OS=Homo sapiens	no	N/A	0.948	0.063	0.317	4e-07
Q8R4L0	259	Src-like-adapter 2 OS=Mus	no	N/A	0.814	0.305	0.354	6e-07
Q9HBL0	1735	Tensin-1 OS=Homo sapiens	no	N/A	0.979	0.054	0.293	7e-07
Q63HR2	1409	Tensin-like C1 domain-con	no	N/A	0.907	0.062	0.34	3e-06

>sp|Q8IZW8|TENS4_HUMAN Tensin-4 OS=Homo sapiens GN=TNS4 PE=1 SV=3

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 12/101 (11%)

Query: 1   MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLI 50
           + +E  +E+L +E  GAF++R+S++  G F L+L+V          P E  +  I H+LI
Sbjct: 454 ITREQAIELLRKEEPGAFVIRDSSSYRGSFGLALKVQEVPASAQSRPGEDSNDLIRHFLI 513

Query: 51  LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L++
Sbjct: 514 ESSAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKLTI 554

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton (By similarity). May promote apoptosis, via its cleavage by caspase-3.
Homo sapiens (taxid: 9606)

>sp|Q32PJ7|TENS4_BOVIN Tensin-4 OS=Bos taurus GN=TNS4 PE=2 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 12/97 (12%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
           +E  +E+L +E  GAF+VR+S++  G F L+L+V          P E     I H+LI  
Sbjct: 456 REQAIELLRKEEPGAFIVRDSSSYRGSFGLALKVQEAPTPAQSRPGEDSSDLIRHFLIES 515

Query: 53  TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTL 87
           +AKG  +KG  +E  F SL++ +  HS+M   LPC L
Sbjct: 516 SAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKL 552

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton May promote apoptosis, via its cleavage by caspase-3 (By similarity). Cytoplasm, cytoskeleton.

Bos taurus (taxid: 9913)

>sp|Q8BZ33|TENS4_MOUSE Tensin-4 OS=Mus musculus GN=Tns4 PE=2 SV=2

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)

Query: 1   MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLI 50
           + +E  + +L  E  GAF++R+S++  G F L+L+V          P E     I H+LI
Sbjct: 434 ITREQAINLLRTEKPGAFVIRDSSSYRGSFGLALKVQETSASAPNRPGEDSSDLIRHFLI 493

Query: 51  LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             +AKG  +KG  +E  F SL+S +  HS+M   LPC L++
Sbjct: 494 ESSAKGVHLKGADEEPYFGSLSSFVCQHSIMALALPCKLTI 534

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton May promote apoptosis, via its cleavage by caspase-3 (By similarity). Cytoplasm, cytoskeleton.

Mus musculus (taxid: 10090)

>sp|Q5SSZ5|TENS3_MOUSE Tensin-3 OS=Mus musculus GN=Tns3 PE=1 SV=1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 15/107 (14%)

Query: 3    QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV---PKEFHHLG----------IAHYL 49
            +E  + +L  +  G+F+VR+S +  G + L+++V   P    HL           + H+L
Sbjct: 1174 REQAIAMLKDKAPGSFIVRDSHSFRGAYGLAMKVATPPPSVLHLNKKAGDLSNELVRHFL 1233

Query: 50   ILRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNP 94
            I  T KG ++KG + E  F SLT+L+  HS+ P  LPC L +   +P
Sbjct: 1234 IECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDP 1280

May play a role in actin remodeling. Involved in the dissociation of the integrin-tensin-actin complex. EGF activates TNS4 and down-regulates TNS3 which results in capping the tail of ITGB1. Seems to be involved in mammary cell migration (By similarity). May be involved in cell migration and bone development.

Mus musculus (taxid: 10090)

>sp|Q4V8I3|TENS4_RAT Tensin-4 OS=Rattus norvegicus GN=Tns4 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 12/101 (11%)

Query: 1   MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLI 50
           + +E  + +L  E  G F++R+S++  G F L+L+V          P E     I H+L+
Sbjct: 456 ITREQAINLLRTEKPGTFVIRDSSSYRGSFGLALKVQETPASAPNRPGEDSTDFIRHFLV 515

Query: 51  LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L++
Sbjct: 516 ESSAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKLTI 556

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton May promote apoptosis, via its cleavage by caspase-3 (By similarity). Cytoplasm, cytoskeleton.

Rattus norvegicus (taxid: 10116)

>sp|Q9GLM4|TENS1_BOVIN Tensin-1 OS=Bos taurus GN=TNS1 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 14/109 (12%)

Query: 3    QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPK------------EFHHLGIAHYLI 50
            +E  + +L  +  GAF++R+S +  G + L+++V              +  H  + H+LI
Sbjct: 1450 REQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNKKGDMTHELVRHFLI 1509

Query: 51   LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
                +G K+KG   E  F SL++L+  HS++P  LPC L +   +P  E
Sbjct: 1510 ETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDE 1558

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton.

Bos taurus (taxid: 9913)

>sp|Q68CZ2|TENS3_HUMAN Tensin-3 OS=Homo sapiens GN=TNS3 PE=1 SV=2

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 15/107 (14%)

Query: 3    QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV---PKEFHHLG----------IAHYL 49
            +E  + +L  +  G+F+VR+S +  G + L+++V   P     L           + H+L
Sbjct: 1179 REQAIAMLKDKEPGSFIVRDSHSFRGAYGLAMKVATPPPSVLQLNKKAGDLANELVRHFL 1238

Query: 50   ILRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNP 94
            I  T KG ++KG + E  F SLT+L+  HS+ P  LPC L +   +P
Sbjct: 1239 IECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDP 1285

May play a role in actin remodeling. Involved in the dissociation of the integrin-tensin-actin complex. EGF activates TNS4 and down-regulates TNS3 which results in capping the tail of ITGB1. Seems to be involved in mammary cell migration. May be involved in cell migration and bone development.

Homo sapiens (taxid: 9606)

>sp|Q8R4L0|SLAP2_MOUSE Src-like-adapter 2 OS=Mus musculus GN=Sla2 PE=1 SV=3

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%)

Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
           +L   P GAF++RES T+ GC++LS+R+ +      I HY I R   G+        F S
Sbjct: 108 LLPGNPGGAFLIRESQTRRGCYSLSVRLSRPASWDRIRHYRIQRLDNGWLYISPRLTFPS 167

Query: 69  LTSLITHHSVMPELLPCTL 87
           L +L+ H+S + + + C L
Sbjct: 168 LHALVEHYSELADGICCPL 186

Adapter protein, which negatively regulates T-cell receptor (TCR) signaling. Inhibits T-cell antigen-receptor induced activation of nuclear factor of activated T-cells. May act by linking signaling proteins such as ZAP70 with CBL, leading to a CBL dependent degradation of signaling proteins.

Mus musculus (taxid: 10090)

>sp|Q9HBL0|TENS1_HUMAN Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 14/109 (12%)

Query: 3    QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPK------------EFHHLGIAHYLI 50
            +E  + +L  +  GAF++R+S +  G + L+++V              +  H  + H+LI
Sbjct: 1470 REQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNKKGDMTHELVRHFLI 1529

Query: 51   LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
                +G K+KG   E  F SL++L+  HS++P  LPC L +   +P  E
Sbjct: 1530 ETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDE 1578

May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton.

Homo sapiens (taxid: 9606)

>sp|Q63HR2|TENC1_HUMAN Tensin-like C1 domain-containing phosphatase OS=Homo sapiens GN=TENC1 PE=1 SV=2

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 12/100 (12%)

Query: 7    LEVLSQEPVGAFMVRESTTKPGCFALSLRV----PKEFHHLG------IAHYLILRTAKG 56
            + +L  +  GAF++R+S +  G + L+L+V    P      G      + H+LI    KG
Sbjct: 1151 IALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKG 1210

Query: 57   YKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNP 94
             KIKG   E  F SL++L++ HS+ P  LPC L +   +P
Sbjct: 1211 VKIKGCPSEPYFGSLSALVSQHSISPISLPCCLRIPSKDP 1250

Regulates cell motility and proliferation. May have phosphatase activity. Reduces AKT1 phosphorylation. Lowers AKT1 kinase activity and interferes with AKT1 signaling.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
328708867	403	PREDICTED: hypothetical protein LOC10016	0.969	0.233	0.872	2e-42
270001817	602	hypothetical protein TcasGA2_TC000706 [T	0.969	0.156	0.819	2e-40
383862319	533	PREDICTED: uncharacterized protein LOC10	0.969	0.176	0.829	3e-40
322778875	457	hypothetical protein SINV_12079 [Solenop	0.969	0.205	0.829	3e-40
307201348	441	Tensin-1 [Harpegnathos saltator]	0.969	0.213	0.829	3e-40
91076848	562	PREDICTED: similar to CG33993 CG33993-PA	0.969	0.167	0.819	4e-40
345490200	617	PREDICTED: hypothetical protein LOC10012	0.969	0.152	0.829	5e-40
328785357	535	PREDICTED: hypothetical protein LOC40880	0.969	0.175	0.829	5e-40
307184801	510	Tensin-1 [Camponotus floridanus]	0.969	0.184	0.829	5e-40
340712997	572	PREDICTED: hypothetical protein LOC10064	0.969	0.164	0.829	1e-39

>gi|328708867|ref|XP_001942843.2| PREDICTED: hypothetical protein LOC100163483 [Acyrthosiphon pisum]

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/94 (87%), Positives = 88/94 (93%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVL QEPVGAFMVRESTTKPGCFALSLRVP+EFH LGIAHYLILRT KG+KIKGF
Sbjct: 277 REITLEVLGQEPVGAFMVRESTTKPGCFALSLRVPQEFHPLGIAHYLILRTNKGFKIKGF 336

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP F
Sbjct: 337 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPTF 370

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001817|gb|EEZ98264.1| hypothetical protein TcasGA2_TC000706 [Tribolium castaneum]

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 77/94 (81%), Positives = 86/94 (91%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EI LE+L+QEPVGAFMVREST+KPGCFALSLRVP+ F   GIAHYLI+RT KGYKIKGF
Sbjct: 476 REIALEILAQEPVGAFMVRESTSKPGCFALSLRVPRSFQPTGIAHYLIVRTNKGYKIKGF 535

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LTSLITHHSVMPELLPC LSL RYNP+F
Sbjct: 536 TKEFTTLTSLITHHSVMPELLPCPLSLSRYNPSF 569

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862319|ref|XP_003706631.1| PREDICTED: uncharacterized protein LOC100880089 [Megachile rotundata]

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 407 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 466

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 467 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 500

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322778875|gb|EFZ09291.1| hypothetical protein SINV_12079 [Solenopsis invicta]

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 331 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 390

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 391 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 424

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201348|gb|EFN81183.1| Tensin-1 [Harpegnathos saltator]

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 315 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 374

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 375 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 408

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076848|ref|XP_974801.1| PREDICTED: similar to CG33993 CG33993-PA [Tribolium castaneum]

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/94 (81%), Positives = 86/94 (91%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EI LE+L+QEPVGAFMVREST+KPGCFALSLRVP+ F   GIAHYLI+RT KGYKIKGF
Sbjct: 436 REIALEILAQEPVGAFMVRESTSKPGCFALSLRVPRSFQPTGIAHYLIVRTNKGYKIKGF 495

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LTSLITHHSVMPELLPC LSL RYNP+F
Sbjct: 496 TKEFTTLTSLITHHSVMPELLPCPLSLSRYNPSF 529

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490200|ref|XP_001604388.2| PREDICTED: hypothetical protein LOC100120785 [Nasonia vitripennis]

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 491 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 550

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 551 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 584

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785357|ref|XP_392334.4| PREDICTED: hypothetical protein LOC408803 [Apis mellifera]

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 409 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 468

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 469 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 502

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184801|gb|EFN71115.1| Tensin-1 [Camponotus floridanus]

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 384 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 443

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 444 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 477

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712997|ref|XP_003395038.1| PREDICTED: hypothetical protein LOC100646619 [Bombus terrestris] gi|350419718|ref|XP_003492279.1| PREDICTED: hypothetical protein LOC100747418 [Bombus impatiens]

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
           +EITLEVLSQEP GAFMVREST+KPGC+ALSLRVP+EF   GIAHYLI+RT KGYKIKGF
Sbjct: 446 REITLEVLSQEPEGAFMVRESTSKPGCYALSLRVPREFQPSGIAHYLIMRTNKGYKIKGF 505

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
           TKEF++LT+LITHHSVMPELLPC LSL RYNP+F
Sbjct: 506 TKEFTTLTALITHHSVMPELLPCPLSLSRYNPSF 539

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
FB|FBgn0053993	421	CG33993 [Drosophila melanogast	0.896	0.206	0.707	8.2e-28
UNIPROTKB|Q8IZW8	715	TNS4 "Tensin-4" [Homo sapiens	0.896	0.121	0.363	1.7e-08
UNIPROTKB|F1MN94	716	TNS4 "Tensin-4" [Bos taurus (t	0.876	0.118	0.381	4.6e-08
UNIPROTKB|Q32PJ7	716	TNS4 "Tensin-4" [Bos taurus (t	0.876	0.118	0.381	4.6e-08
WB|WBGene00006508	1112	tag-163 [Caenorhabditis elegan	0.948	0.082	0.356	4.9e-08
UNIPROTKB|F1RXE4	716	TNS4 "Uncharacterized protein"	0.876	0.118	0.381	5.8e-08
MGI|MGI:2144377	696	Tns4 "tensin 4" [Mus musculus	0.896	0.125	0.363	7.2e-08
RGD|1562071	262	Sla2 "Src-like-adaptor 2" [Rat	0.835	0.309	0.358	1.2e-07
MGI|MGI:1925049	259	Sla2 "Src-like-adaptor 2" [Mus	0.835	0.312	0.358	1.9e-07
MGI|MGI:2443012	1440	Tns3 "tensin 3" [Mus musculus	0.948	0.063	0.327	2.2e-07

FB|FBgn0053993 CG33993 [Drosophila melanogaster (taxid:7227)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 63/89 (70%), Positives = 74/89 (83%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
             +EI+LE LS++  GAF+VR+S+TKPGCFALSLRVP       +AHYLILRT +GYKIKGF
Sbjct:   293 REISLEALSRQSPGAFLVRQSSTKPGCFALSLRVPPPSPR--VAHYLILRTQRGYKIKGF 350

Query:    63 TKEFSSLTSLITHHSVMPELLPCTLSLHR 91
             TKEFSSL +LITHHSVMPELLP  L+L R
Sbjct:   351 TKEFSSLKALITHHSVMPELLPVPLTLPR 379

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q8IZW8 TNS4 "Tensin-4" [Homo sapiens (taxid:9606)]

 Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 36/99 (36%), Positives = 58/99 (58%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
             +E  +E+L +E  GAF++R+S++  G F L+L+V          P E  +  I H+LI  
Sbjct:   456 REQAIELLRKEEPGAFVIRDSSSYRGSFGLALKVQEVPASAQSRPGEDSNDLIRHFLIES 515

Query:    53 TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L++
Sbjct:   516 SAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKLTI 554

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0008104 "protein localization" evidence=IDA

GO:0005925 "focal adhesion" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MN94 TNS4 "Tensin-4" [Bos taurus (taxid:9913)]

 Score = 136 (52.9 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
             +E  +E+L +E  GAF+VR+S++  G F L+L+V          P E     I H+LI  
Sbjct:   456 REQAIELLRKEEPGAFIVRDSSSYRGSFGLALKVQEAPTPAQSRPGEDSSDLIRHFLIES 515

Query:    53 TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTL 87
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L
Sbjct:   516 SAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKL 552

GO:0008104 "protein localization" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

UNIPROTKB|Q32PJ7 TNS4 "Tensin-4" [Bos taurus (taxid:9913)]

 Score = 136 (52.9 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
             +E  +E+L +E  GAF+VR+S++  G F L+L+V          P E     I H+LI  
Sbjct:   456 REQAIELLRKEEPGAFIVRDSSSYRGSFGLALKVQEAPTPAQSRPGEDSSDLIRHFLIES 515

Query:    53 TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTL 87
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L
Sbjct:   516 SAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKL 552

GO:0005925 "focal adhesion" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

WB|WBGene00006508 tag-163 [Caenorhabditis elegans (taxid:6239)]

 Score = 138 (53.6 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 36/101 (35%), Positives = 56/101 (55%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV--PKEFHHLG-----IAHYLILRTAK 55
             +E  + +L  +P G F+VR+S + PG F L+L+V  P    + G     + H+LI  + K
Sbjct:   848 REQAINMLRDKPPGTFVVRDSNSFPGAFGLALKVSTPPPGVNPGDGSELVRHFLIEPSPK 907

Query:    56 GYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNP 94
             G K+KG   E  F SL++L+  HS+    LP  L L  ++P
Sbjct:   908 GVKLKGCNNEPVFGSLSALVYQHSITALALPTKLVLPDFDP 948

GO:0030054 "cell junction" evidence=IDA

GO:0031430 "M band" evidence=IDA

GO:0055120 "striated muscle dense body" evidence=IDA

UNIPROTKB|F1RXE4 TNS4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 135 (52.6 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
             +E  +E+L +E  GAF+VR+S++  G F L+L+V          P E     I H+LI  
Sbjct:   456 REQAIELLRKEEPGAFIVRDSSSYRGSFGLALKVHEAPVPAQNRPGEDGSDLIRHFLIES 515

Query:    53 TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTL 87
             +AKG  +KG  +E  F SL++ +  HS+M   LPC L
Sbjct:   516 SAKGVHLKGADEEPYFGSLSAFVCQHSIMALALPCKL 552

GO:0008104 "protein localization" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

MGI|MGI:2144377 Tns4 "tensin 4" [Mus musculus (taxid:10090)]

 Score = 134 (52.2 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 36/99 (36%), Positives = 55/99 (55%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----------PKEFHHLGIAHYLILR 52
             +E  + +L  E  GAF++R+S++  G F L+L+V          P E     I H+LI  
Sbjct:   436 REQAINLLRTEKPGAFVIRDSSSYRGSFGLALKVQETSASAPNRPGEDSSDLIRHFLIES 495

Query:    53 TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             +AKG  +KG  +E  F SL+S +  HS+M   LPC L++
Sbjct:   496 SAKGVHLKGADEEPYFGSLSSFVCQHSIMALALPCKLTI 534

GO:0003674 "molecular_function" evidence=ND

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005925 "focal adhesion" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0008104 "protein localization" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

RGD|1562071 Sla2 "Src-like-adaptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 29/81 (35%), Positives = 45/81 (55%)

Query:     7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
             L +L   P GAF++RES T+ GC++LS+R+ +      I HY I R   G+        F
Sbjct:   108 LLLLPGNPGGAFLIRESQTRRGCYSLSIRLSRPASWDRIRHYRIQRLDNGWLYISPRLTF 167

Query:    67 SSLTSLITHHSVMPELLPCTL 87
              SL +L+ H+S + + + C L
Sbjct:   168 PSLHALVEHYSELADGICCAL 188

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0005070 "SH3/SH2 adaptor activity" evidence=IEA;ISO

GO:0005770 "late endosome" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA;ISO

GO:0042110 "T cell activation" evidence=IEA;ISO

GO:0047485 "protein N-terminus binding" evidence=IEA;ISO

GO:0050849 "negative regulation of calcium-mediated signaling" evidence=IEA;ISO

MGI|MGI:1925049 Sla2 "Src-like-adaptor 2" [Mus musculus (taxid:10090)]

 Score = 123 (48.4 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 29/81 (35%), Positives = 45/81 (55%)

Query:     7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
             L +L   P GAF++RES T+ GC++LS+R+ +      I HY I R   G+        F
Sbjct:   106 LLLLPGNPGGAFLIRESQTRRGCYSLSVRLSRPASWDRIRHYRIQRLDNGWLYISPRLTF 165

Query:    67 SSLTSLITHHSVMPELLPCTL 87
              SL +L+ H+S + + + C L
Sbjct:   166 PSLHALVEHYSELADGICCPL 186

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005070 "SH3/SH2 adaptor activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005770 "late endosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0042110 "T cell activation" evidence=IDA

GO:0047485 "protein N-terminus binding" evidence=ISO

GO:0050849 "negative regulation of calcium-mediated signaling" evidence=ISO

MGI|MGI:2443012 Tns3 "tensin 3" [Mus musculus (taxid:10090)]

 Score = 133 (51.9 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 35/107 (32%), Positives = 57/107 (53%)

Query:     3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV---PKEFHHLG----------IAHYL 49
             +E  + +L  +  G+F+VR+S +  G + L+++V   P    HL           + H+L
Sbjct:  1174 REQAIAMLKDKAPGSFIVRDSHSFRGAYGLAMKVATPPPSVLHLNKKAGDLSNELVRHFL 1233

Query:    50 ILRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNP 94
             I  T KG ++KG + E  F SLT+L+  HS+ P  LPC L +   +P
Sbjct:  1234 IECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDP 1280

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	97
cd09927	116	cd09927, SH2_Tensin_like, Src homology 2 domain fo	1e-14
smart00252	84	smart00252, SH2, Src homology 2 domains	2e-14
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	3e-14
pfam00017	77	pfam00017, SH2, SH2 domain	3e-12
cd10344	104	cd10344, SH2_SLAP, Src homology 2 domain found in	4e-11
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	2e-09
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	9e-09
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	2e-08
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	1e-07
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	2e-07
cd10353	103	cd10353, SH2_Nterm_RasGAP, N-terminal Src homology	3e-07
cd09930	104	cd09930, SH2_cSH2_p85_like, C-terminal Src homolog	4e-07
cd10355	92	cd10355, SH2_DAPP1_BAM32_like, Src homology 2 doma	9e-07
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	3e-06
cd10339	101	cd10339, SH2_RIN_family, Src homology 2 (SH2) doma	3e-06
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	3e-06
cd10393	101	cd10393, SH2_RIN1, Src homology 2 (SH2) domain fou	6e-06
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	8e-06
cd10418	101	cd10418, SH2_Src_Fyn_isoform_a_like, Src homology	9e-06
cd10419	101	cd10419, SH2_Src_Fyn_isoform_b_like, Src homology	1e-05
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	1e-05
cd10366	101	cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain	1e-05
cd10413	108	cd10413, SH2_Grb7, Src homology 2 (SH2) domain fou	1e-05
cd10368	101	cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain	2e-05
cd10365	101	cd10365, SH2_Src_Src, Src homology 2 (SH2) domain	2e-05
cd10363	104	cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain	2e-05
cd10362	101	cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain	4e-05
cd09938	104	cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src	7e-05
cd10367	101	cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain	8e-05
cd10356	113	cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domai	2e-04
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	2e-04
cd10364	101	cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain	4e-04
cd10370	96	cd10370, SH2_Src_Src42, Src homology 2 (SH2) domai	5e-04
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	5e-04
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	7e-04
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	0.001
cd10414	108	cd10414, SH2_Grb14, Src homology 2 (SH2) domain fo	0.001
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	0.002
cd10415	108	cd10415, SH2_Grb10, Src homology 2 (SH2) domain fo	0.002
cd10340	99	cd10340, SH2_N-SH2_SHP_like, N-terminal Src homolo	0.002
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	0.003
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	0.004
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	0.004

>gnl|CDD|198181 cd09927, SH2_Tensin_like, Src homology 2 domain found in Tensin-like proteins

 Score = 63.6 bits (155), Expect = 1e-14
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 14/95 (14%)

Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRV---PKEFHHLGIA---------HYLILRTAKG 56
           +L  +P G F+VR+STT  G + L+++V   P   +              H+LI  + KG
Sbjct: 18  LLKDKPPGTFLVRDSTTYKGAYGLAVKVATPPPGVNPFEAKGDPESELVRHFLIEPSPKG 77

Query: 57  YKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
            K+KG   E  F SL++L+  HS+ P  LPC L +
Sbjct: 78  VKLKGCPNEPVFGSLSALVYQHSITPLALPCKLRI 112

SH2 domain found in Tensin-like proteins. The Tensins are a family of intracellular proteins that interact with receptor tyrosine kinases (RTKs), integrins, and actin. They are thought act as signaling bridges between the extracellular space and the cytoskeleton. There are four homologues: Tensin1, Tensin2 (TENC1, C1-TEN), Tensin3 and Tensin4 (cten), all of which contain a C-terminal tandem SH2-PTB domain pairing, as well as actin-binding regions that may localize them to focal adhesions. The isoforms of Tensin2 and Tensin3 contain N-terminal C1 domains, which are atypical and not expected to bind to phorbol esters. Tensins 1-3 contain a phosphatase (PTPase) and C2 domain pairing which resembles PTEN (phosphatase and tensin homologue deleted on chromosome 10) protein. PTEN is a lipid phosphatase that dephosphorylates phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) to yield phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). As PtdIns(3,4,5)P3 is the product of phosphatidylinositol 3-kinase (PI3K) activity, PTEN is therefore a key negative regulator of the PI3K pathway. Because of their PTEN-like domains, the Tensins may also possess phosphoinositide-binding or phosphatase capabilities. However, only Tensin2 and Tensin3 have the potential to be phosphatases since only their PTPase domains contain a cysteine residue that is essential for catalytic activity. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 116

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 62.2 bits (152), Expect = 2e-14
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
          ++L  E  G F+VR+S + PG + LS+RV  +       HY I R   G + ++G  K F
Sbjct: 15 KLLKNEGDGDFLVRDSESSPGDYVLSVRVKGKVK-----HYRIRRNEDGKFYLEGGRK-F 68

Query: 67 SSLTSLITHHSVMP 80
           SL  L+ H+    
Sbjct: 69 PSLVELVEHYQKNS 82

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 61.3 bits (149), Expect = 3e-14
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT-KEFSS 68
          L  +P G F+VRES+++PG + LS+R         + HYLI R   GY + G + + F S
Sbjct: 16 LRGKPDGTFLVRESSSEPGDYVLSVRSGDG----KVKHYLIERNEGGYYLLGGSGRTFPS 71

Query: 69 LTSLITHH 76
          L  L+ H+
Sbjct: 72 LPELVEHY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 56.4 bits (137), Expect = 3e-12
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSS 68
          L+ +P G F+VRES +KPG + LS+R           HY I     G Y I G    F+S
Sbjct: 16 LNPKPDGTFLVRESESKPGDYTLSVRDDGRVK-----HYRIQSLDNGGYYISGGVT-FNS 69

Query: 69 LTSLITHH 76
          L  L+ H+
Sbjct: 70 LPELVEHY 77

Length = 77

>gnl|CDD|198207 cd10344, SH2_SLAP, Src homology 2 domain found in Src-like adaptor proteins

 Score = 54.4 bits (131), Expect = 4e-11
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 7   LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG--YKIKGFTK 64
           L +L    VG+F++RES T+ GC++LS+R         + HY I R   G  Y     T 
Sbjct: 25  LLMLPGNQVGSFLIRESETRRGCYSLSVRHRGSQSRDSVKHYRIFRLDNGWFYISPRLT- 83

Query: 65  EFSSLTSLITHHSVMPELLPCT 86
            F  L  ++ H+S   + L C 
Sbjct: 84  -FQCLEDMVNHYSESADGLCCV 104

SLAP belongs to the subfamily of adapter proteins that negatively regulate cellular signaling initiated by tyrosine kinases. It has a myristylated N-terminus, SH3 and SH2 domains with high homology to Src family tyrosine kinases, and a unique C-terminal tail, which is important for c-Cbl binding. SLAP negatively regulates platelet-derived growth factor (PDGF)-induced mitogenesis in fibroblasts and regulates F-actin assembly for dorsal ruffles formation. c-Cbl mediated SLAP inhibition towards actin remodeling. Moreover, SLAP enhanced PDGF-induced c-Cbl phosphorylation by SFK. In contrast, SLAP mitogenic inhibition was not mediated by c-Cbl, but it rather involved a competitive mechanism with SFK for PDGF-receptor (PDGFR) association and mitogenic signaling. Accordingly, phosphorylation of the Src mitogenic substrates Stat3 and Shc were reduced by SLAP. Thus, we concluded that SLAP regulates PDGFR signaling by two independent mechanisms: a competitive mechanism for PDGF-induced Src mitogenic signaling and a non-competitive mechanism for dorsal ruffles formation mediated by c-Cbl. SLAP is a hematopoietic adaptor containing Src homology (SH)3 and SH2 motifs and a unique carboxy terminus. Unlike c-Src, SLAP lacks a tyrosine kinase domain. Unlike c-Src, SLAP does not impact resorptive function of mature osteoclasts but induces their early apoptosis. SLAP negatively regulates differentiation of osteoclasts and proliferation of their precursors. Conversely, SLAP decreases osteoclast death by inhibiting activation of caspase 3. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 49.6 bits (119), Expect = 2e-09
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 8/68 (11%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSS 68
          ++Q P GAF++RES + PG F+LS++         + H+ +LR   G Y +  +  +F+S
Sbjct: 20 MNQRPDGAFLIRESESSPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFL--WVVKFNS 72

Query: 69 LTSLITHH 76
          L  L+ +H
Sbjct: 73 LNELVDYH 80

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 48.2 bits (115), Expect = 9e-09
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G+F+VRES + PG +++SLR     +   + HY I   + G         F++L  L+ H
Sbjct: 25 GSFLVRESESSPGQYSISLR-----YDGRVYHYRISEDSDGKVYVTQEHRFNTLAELVHH 79

Query: 76 HSVMPELLPCTL 87
          HS   + L  TL
Sbjct: 80 HSKNADGLITTL 91

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 5/65 (7%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G+F+VRES +KPG F LS+R   +     + H +I      Y + G  +EF SLT L+ H
Sbjct: 23 GSFLVRESQSKPGDFVLSVRTDDD----KVTHIMIRCQGGKYDVGG-GEEFDSLTDLVEH 77

Query: 76 HSVMP 80
          +   P
Sbjct: 78 YKKNP 82

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT-AKGYKIKGFTKEFSSLTSL 72
          P G F++RES T PG ++LS+R   +     + HY I +    GY I      F +L  L
Sbjct: 25 PRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIRKLDNGGYYITTRAT-FPTLQEL 83

Query: 73 ITHHSVMPELLPCTLS 88
          + H+S   + L C L+
Sbjct: 84 VQHYSKDADGLCCRLT 99

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI-----KGFTKEFSSLT 70
          G F+VRES + PG F LSL+     H   I HY I+      +       G TK F  L 
Sbjct: 29 GVFLVRESQSNPGAFVLSLK-----HGQKIKHYQIIPIEDEGQWYFTLDDGVTK-FYDLL 82

Query: 71 SLITHHSVMPELLPCTL 87
           L+  + +    LP  L
Sbjct: 83 QLVEFYQLNAGSLPTRL 99

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198216 cd10353, SH2_Nterm_RasGAP, N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 44.4 bits (105), Expect = 3e-07
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 16  GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
           G++++RES  +PG F LS          G+ H+ I+     Y I G  + FSSL+ LI +
Sbjct: 42  GSYLIRESDRRPGSFVLSF-----LSRTGVNHFRIIAMCGDYYIGG--RRFSSLSDLIGY 94

Query: 76  HSVMPELL 83
           +S +  LL
Sbjct: 95  YSHVSCLL 102

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198184 cd09930, SH2_cSH2_p85_like, C-terminal Src homology 2 (cSH2) domain found in p85

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 12/73 (16%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF- 66
          E+L  +P G F++RES+T+ GC+A S+    E     + H +I +T  GY   GF + + 
Sbjct: 20 ELLRGKPDGTFLIRESSTQ-GCYACSVVCNGE-----VKHCVIYKTETGY---GFAEPYN 70

Query: 67 --SSLTSLITHHS 77
             SL  L+ H++
Sbjct: 71 LYESLKELVLHYA 83

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, a inter SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and 2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, 2) p85 iSH2 domain with C2 domain of p110alpha, and 3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198218 cd10355, SH2_DAPP1_BAM32_like, Src homology 2 domain found in dual adaptor for phosphotyrosine and 3-phosphoinositides ( DAPP1)/B lymphocyte adaptor molecule of 32 kDa (Bam32)-like proteins

 Score = 42.9 bits (101), Expect = 9e-07
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
          +LS    G++++R S    G F+LS+R         + H+ +  T   +K  GF  EFSS
Sbjct: 22 LLSNGVDGSYLLRNSNEGTGLFSLSVRAKD-----SVKHFHVEYTGYSFKF-GFN-EFSS 74

Query: 69 LTSLITHHSVMP 80
          L   + H +  P
Sbjct: 75 LQDFVKHFANQP 86

DAPP1/Bam32 contains a putative myristoylation site at its N-terminus, followed by a SH2 domain, and a pleckstrin homology (PH) domain at its C-terminus. DAPP1 could potentially be recruited to the cell membrane by any of these domains. Its putative myristoylation site could facilitate the interaction of DAPP1 with the lipid bilayer. Its SH2 domain may also interact with phosphotyrosine residues on membrane-associated proteins such as activated tyrosine kinase receptors. And finally its PH domain exhibits a high-affinity interaction with the PtdIns(3,4,5)P(3) PtdIns(3,4)P(2) second messengers produced at the cell membrane following the activation of PI 3-kinases. DAPP1 is thought to interact with both tyrosine phosphorylated proteins and 3-phosphoinositides and therefore may play a role in regulating the location and/or activity of such proteins(s) in response to agonists that elevate PtdIns(3,4,5)P(3) and PtdIns(3,4)P(2). This protein is likely to play an important role in triggering signal transduction pathways that lie downstream from receptor tyrosine kinases and PI 3-kinase. It is likely that DAPP1 functions as an adaptor to recruit other proteins to the plasma membrane in response to extracellular signals. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 92

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 41.3 bits (97), Expect = 3e-06
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSS 68
          +     G+F+VRES   PG ++LS RV +     GI H+ I+ T    + + G    FSS
Sbjct: 17 VKVGGPGSFLVRESDNTPGDYSLSFRVNE-----GIKHFKIIPTGNNQFMMGGRY--FSS 69

Query: 69 LTSLITHH 76
          L  +I  +
Sbjct: 70 LDDVIDRY 77

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198202 cd10339, SH2_RIN_family, Src homology 2 (SH2) domain found in Ras and Rab interactor (RIN)-family

 Score = 41.8 bits (98), Expect = 3e-06
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF 62
                 +L  EP G F+VR+S T+  C  L +R+P+      ++ + I  +  G  ++G 
Sbjct: 19  AAEAAHMLQTEPPGTFLVRKSNTRQ-CQVLCMRLPEASGPAFVSEHYIKESPGGVSLEGS 77

Query: 63  TKEFSSLTSLITHHSVMPELLPCT 86
              F  L  LI  +    ++LP T
Sbjct: 78  ELMFPDLFRLIAFYCHSRDILPFT 101

The RIN (AKA Ras interaction/interference) family is composed of RIN1, RIN2 and RIN3. These proteins have multifunctional domains including SH2 and proline-rich (PR) domains in the N-terminal region, and RIN-family homology (RH), VPS9 and Ras-association (RA) domains in the C-terminal region. RIN proteins function as Rab5-GEFs, and RIN3 specifically functions as a Rab31-GEF. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 30/98 (30%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLR------VPKEFHHLGIAHYLILRTAKGYKIKG 61
          E +   P G F+VR+++T  G + L+LR      + K FH  G   Y            G
Sbjct: 21 EKMRDTPDGTFLVRDASTMKGDYTLTLRKGGNNKLIKIFHRDG--KY------------G 66

Query: 62 FTKE--FSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
          F+    F+S+  LI ++           SL  YN   +
Sbjct: 67 FSDPLTFNSVVELINYYR--------NNSLAEYNRKLD 96

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|198256 cd10393, SH2_RIN1, Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins

 Score = 41.0 bits (96), Expect = 6e-06
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 7   LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           L VL  EP G F+VR+S T+  C AL +R+P+      ++ + I  +  G  ++G    F
Sbjct: 23  LHVLRTEPPGTFLVRKSNTRQ-CQALCVRLPEASGPSFVSSHYIQESPGGVSLEGSELTF 81

Query: 67  SSLTSLITHHSVMPELLPCT 86
             L  LI  +    ++L   
Sbjct: 82  PDLVQLICAYCHTRDILLLP 101

RIN1, a member of the RIN (AKA Ras interaction/interference) family, have multifunctional domains including SH2 and proline-rich (PR) domains in the N-terminal region, and RIN-family homology (RH), VPS9 and Ras-association (RA) domains in the C-terminal region. RIN proteins function as Rab5-GEFs. Previous studies showed that RIN1 interacts with EGF receptors via its SH2 domain and regulates trafficking and degradation of EGF receptors via its interaction with STAM, indicating a vital role for RIN1 in regulating endosomal trafficking of receptor tyrosine kinases (RTKs). RIN1 was first identified as a Ras-binding protein that suppresses the activated RAS2 allele in S. cerevisiae. RIN1 binds to the activated Ras through its carboxyl-terminal domain and this Ras-binding domain also binds to 14-3-3 proteins as Raf-1 does. The SH2 domain of RIN1 are thought to interact with the phosphotyrosine-containing proteins, but the physiological partners for this domain are unknown. The proline-rich domain in RIN1 is similar to the consensus SH3 binding regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 40.7 bits (96), Expect = 8e-06
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+L + P  GAF+VR S T P  FA+S R   +     I H  I +  + + I   T +F
Sbjct: 18 EMLMRVPRDGAFLVRPSETDPNSFAISFRAEGK-----IKHCRIKQEGRLFVIG--TSQF 70

Query: 67 SSLTSLITHHSVMP 80
           SL  L++++   P
Sbjct: 71 ESLVELVSYYEKHP 84

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198281 cd10418, SH2_Src_Fyn_isoform_a_like, Src homology 2 (SH2) domain found in Fyn isoform a like proteins

 Score = 40.4 bits (94), Expect = 9e-06
 Identities = 23/74 (31%), Positives = 35/74 (47%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
          P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 25 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 84

Query: 74 THHSVMPELLPCTL 87
           H+S     L C L
Sbjct: 85 QHYSERAAGLCCRL 98

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform a type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198282 cd10419, SH2_Src_Fyn_isoform_b_like, Src homology 2 (SH2) domain found in Fyn isoform b like proteins

 Score = 40.0 bits (93), Expect = 1e-05
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
          P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 25 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 84

Query: 74 THHS 77
           H+S
Sbjct: 85 QHYS 88

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform b type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 15 VGAFMVRESTTKPGC---FALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTS 71
           G F+VR++  K G      LS+R   +  H       ++    G K     K F S++ 
Sbjct: 25 DGDFLVRKTEPKGGGKRKLVLSVRWDGKIRHF------VINRDDGGKYYIEGKSFKSISE 78

Query: 72 LITHH 76
          LI ++
Sbjct: 79 LINYY 83

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|198229 cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain found in Yes

 Score = 40.0 bits (93), Expect = 1e-05
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRES T  G ++LS+R   E     + HY I +   G        +F +L  L+ H
Sbjct: 27 GIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKH 86

Query: 76 HS 77
          ++
Sbjct: 87 YT 88

Yes is a member of the Src non-receptor type tyrosine kinase family of proteins. Yes is the cellular homolog of the Yamaguchi sarcoma virus oncogene. In humans it is encoded by the YES1 gene which maps to chromosome 18 and is in close proximity to thymidylate synthase. A corresponding Yes pseudogene has been found on chromosome 22. YES1 has been shown to interact with Janus kinase 2, CTNND1,RPL10, and Occludin. Yes1 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198276 cd10413, SH2_Grb7, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 40.3 bits (94), Expect = 1e-05
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSLTS 71
          G F+VRES   P  F LSL      H   + HYLIL + +     + +      F+ L  
Sbjct: 29 GVFLVRESQRNPQGFVLSL-----CHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQ 83

Query: 72 LITHHSVMPELLPCTL 87
          L+  H +   +LPC L
Sbjct: 84 LVEFHQLNRGILPCLL 99

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb7 is part of the Grb7 family of proteins which also includes Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198231 cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain found in Fyn

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
          P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 25 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 84

Query: 74 THHS 77
           H+S
Sbjct: 85 QHYS 88

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198228 cd10365, SH2_Src_Src, Src homology 2 (SH2) domain found in tyrosine kinase sarcoma (Src)

 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +F+SL 
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFNSLQ 81

Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 82 QLVAYYS 88

Src is a member of the Src non-receptor type tyrosine kinase family of proteins. Src is thought to play a role in the regulation of embryonic development and cell growth. Members here include v-Src and c-Src. v-Src lacks the C-terminal inhibitory phosphorylation site and is therefore constitutively active as opposed to normal cellular src (c-Src) which is only activated under certain circumstances where it is required (e.g. growth factor signaling). v-Src is an oncogene whereas c-Src is a proto-oncogene. c-Src consists of three domains, an N-terminal SH3 domain, a central SH2 domain and a tyrosine kinase domain. The SH2 and SH3 domains work together in the auto-inhibition of the kinase domain. The phosphorylation of an inhibitory tyrosine near the c-terminus of the protein produces a binding site for the SH2 domain which then facilitates binding of the SH3 domain to a polyproline site within the linker between the SH2 domain and the kinase domain. Binding of the SH3 domain inactivates the enzyme. This allows for multiple mechanisms for c-Src activation: dephosphorylation of the C-terminal tyrosine by a protein tyrosine phosphatase, binding of the SH2 domain by a competitive phospho-tyrosine residue, or competitive binding of a polyproline binding site to the SH3 domain. Unlike most other Src members Src lacks cysteine residues in the SH4 domain that undergo palmitylation. Serine and threonine phosphorylation sites have also been identified in the unique domains of Src and are believed to modulate protein-protein interactions or regulate catalytic activity. Alternatively spliced forms of Src, which contain 6- or 11-amino acid insertions in the SH3 domain, are expressed in CNS neurons. c-Src has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198226 cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain found in HCK

 Score = 39.2 bits (91), Expect = 2e-05
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)

Query: 15 VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT--AKGYKIKGFTKEFSSLTSL 72
          +G+FM+R+S T  G ++LS+R     H   + HY I RT    G+ I   +  FS+L  L
Sbjct: 26 LGSFMIRDSETTKGSYSLSVRDYDPQHGDTVKHYKI-RTLDNGGFYISPRST-FSTLQEL 83

Query: 73 ITHH 76
          + H+
Sbjct: 84 VDHY 87

HCK is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in hemopoietic cells. HCK is proposed to couple the Fc receptor to the activation of the respiratory burst. It may also play a role in neutrophil migration and in the degranulation of neutrophils. It has two different translational starts that have different subcellular localization. HCK has been shown to interact with BCR gene, ELMO1 Cbl gene, RAS p21 protein activator 1, RASA3, Granulocyte colony-stimulating factor receptor, ADAM15 and RAPGEF1. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. HCK has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198225 cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain in lymphocyte cell kinase (Lck)

 Score = 38.7 bits (90), Expect = 4e-05
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF----TKEFSSLTS 71
          G+F++RES T  G F+LS+R   +     + HY I     G    GF       F  L  
Sbjct: 27 GSFLIRESETTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNG----GFYISPRITFPGLHE 82

Query: 72 LITHHS 77
          L+ H++
Sbjct: 83 LVRHYT 88

Lck is a member of the Src non-receptor type tyrosine kinase family of proteins. It is expressed in the brain, T-cells, and NK cells. The unique domain of Lck mediates its interaction with two T-cell surface molecules, CD4 and CD8. It associates with their cytoplasmic tails on CD4 T helper cells and CD8 cytotoxic T cells to assist signaling from the T cell receptor (TCR) complex. When the T cell receptor is engaged by the specific antigen presented by MHC, Lck phosphorylase the intracellular chains of the CD3 and zeta-chains of the TCR complex, allowing ZAP-70 to bind them. Lck then phosphorylates and activates ZAP-70, which in turn phosphorylates Linker of Activated T cells (LAT), a transmembrane protein that serves as a docking site for proteins including: Shc-Grb2-SOS, PI3K, and phospholipase C (PLC). The tyrosine phosphorylation cascade culminates in the intracellular mobilization of a calcium ions and activation of important signaling cascades within the lymphocyte, including the Ras-MEK-ERK pathway, which goes on to activate certain transcription factors such as NFAT, NF-kappaB, and AP-1. These transcription factors regulate the production cytokines such as Interleukin-2 that promote long-term proliferation and differentiation of the activated lymphocytes. The N-terminal tail of Lck is myristoylated and palmitoylated and it tethers the protein to the plasma membrane of the cell. Lck also contains a SH3 domain, a SH2 domain, and a C-terminal tyrosine kinase domain. Lck has 2 phosphorylation sites, the first an autophosphorylation site that is linked to activation of the protein and the second which is phosphorylated by Csk, which inhibits it. Lck is also inhibited by SHP-1 dephosphorylation and by Cbl ubiquitin ligase, which is part of the ubiquitin-mediated pathway. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198191 cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70) and Spleen tyrosine kinase (Syk) proteins

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLIT 74
          G F++R+S    G + LS+   ++FH     HY I R   G Y I G  K       L  
Sbjct: 25 GLFLLRQSLRSLGGYVLSVCHGRKFH-----HYTIERQLNGTYAIAG-GKAHCGPAELCE 78

Query: 75 HHSVMPELLPCTL 87
          +HS   + L C L
Sbjct: 79 YHSTDLDGLVCLL 91

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the N-terminus SH2 domains of both Syk and Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198230 cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain found in Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, Fgr

 Score = 38.0 bits (88), Expect = 8e-05
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 8  EVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKE 65
          ++LS   P GAF++RES T  G ++LS+R   +     + HY I +    GY I     +
Sbjct: 18 QLLSPGNPRGAFLIRESETTKGAYSLSIRDWDQNRGDHVKHYKIRKLDTGGYYITTRA-Q 76

Query: 66 FSSLTSLITHH 76
          F ++  L+ H+
Sbjct: 77 FDTVQELVQHY 87

Fgr is a member of the Src non-receptor type tyrosine kinase family of proteins. The protein contains N-terminal sites for myristoylation and palmitoylation, a PTK domain, and SH2 and SH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. Fgr is expressed in B-cells and myeloid cells, localizes to plasma membrane ruffles, and functions as a negative regulator of cell migration and adhesion triggered by the beta-2 integrin signal transduction pathway. Multiple alternatively spliced variants, encoding the same protein, have been identified Fgr has been shown to interact with Wiskott-Aldrich syndrome protein. Fgr has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198219 cd10356, SH2_ShkA_ShkC, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases A and C (ShkA and ShkC)

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
          L+ +P G F+VR ST++PG + +S +V K     GI+H  I R   G K +    ++ S+
Sbjct: 26 LNGKPEGTFLVRFSTSEPGAYTIS-KVSKNG---GISHQRIHR--PGGKFQVNNSKYLSV 79

Query: 70 TSLIT 74
            LI 
Sbjct: 80 KELIA 84

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkA and shkC. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 113

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLIT 74
          G F+VREST+ PG + LSL    E     + HY I R  +  +        F  L +LI 
Sbjct: 25 GLFLVRESTSAPGDYVLSLLAQGE-----VLHYQIRRHGEDAFFSDDGPLIFHGLDTLIE 79

Query: 75 HH 76
          H+
Sbjct: 80 HY 81

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198227 cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain found in Lyn

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK--GYKIKGFTKEFSSLTSLI 73
          GAF++RES T  G ++LS+R     H   I HY I R+    GY I      F  ++ +I
Sbjct: 27 GAFLIRESETLKGSYSLSVRDYDPQHGDVIKHYKI-RSLDNGGYYISPRIT-FPCISDMI 84

Query: 74 THH 76
           H+
Sbjct: 85 KHY 87

Lyn is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in the hematopoietic cells, in neural tissues, liver, and adipose tissue. There are two alternatively spliced forms of Lyn. Lyn plays an inhibitory role in myeloid lineage proliferation. Following engagement of the B cell receptors, Lyn undergoes rapid phosphorylation and activation, triggering a cascade of signaling events mediated by Lyn phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the receptor proteins, and subsequent recruitment and activation of other kinases including Syk, phospholipase C2 (PLC2) and phosphatidyl inositol-3 kinase. These kinases play critical roles in proliferation, Ca2+ mobilization and cell differentiation. Lyn plays an essential role in the transmission of inhibitory signals through phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based inhibitory motifs (ITIM) in regulatory proteins such as CD22, PIR-B and FC RIIb1. Their ITIM phosphorylation subsequently leads to recruitment and activation of phosphatases such as SHIP-1 and SHP-1 which further down modulate signaling pathways, attenuate cell activation and can mediate tolerance. Lyn also plays a role in the insulin signaling pathway. Activated Lyn phosphorylates insulin receptor substrate 1 (IRS1) leading to an increase in translocation of Glut-4 to the cell membrane and increased glucose utilization. It is the primary Src family member involved in signaling downstream of the B cell receptor. Lyn plays an unusual, 2-fold role in B cell receptor signaling; it is essential for initiation of signaling but is also later involved in negative regulation of the signal. Lyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198233 cd10370, SH2_Src_Src42, Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)

 Score = 35.9 bits (83), Expect = 5e-04
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
          +L +   GAF++R+S ++   ++LS+R         + HY I +  +G         F +
Sbjct: 20 LLPENEHGAFLIRDSESRHNDYSLSVRDGDT-----VKHYRIRQLDEGGFFIARRTTFRT 74

Query: 69 LTSLITHHSVMPELLPCTL 87
          L  L+ H+S   + L   L
Sbjct: 75 LQELVEHYSKDSDGLCVNL 93

Src42 is a member of the Src non-receptor type tyrosine kinase family of proteins. The integration of receptor tyrosine kinase-induced RAS and Src42 signals by Connector eNhancer of KSR (CNK) as a two-component input is essential for RAF activation in Drosophila. Src42 is present in a wide variety of organisms including: California sea hare, pea aphid, yellow fever mosquito, honey bee, Panamanian leafcutter ant, and sea urchin. Src42 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF----TKEFSSLTS 71
          G F+VRES T  G + LS      F   G   +  +R+ +    K +       F SL  
Sbjct: 31 GTFLVRESETFVGDYTLS------FWRNGKVQHCRIRSRQENGEKKYYLTDNLVFDSLYE 84

Query: 72 LITHH 76
          LI ++
Sbjct: 85 LIDYY 89

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 35.2 bits (81), Expect = 7e-04
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLT 70
          S+   GAF++RES ++ G F+LS+          + HY I R  +G       K FS+L 
Sbjct: 22 SENQTGAFLIRESESQKGEFSLSVLDGGV-----VKHYRIRRLDEGGFFLTRRKTFSTLN 76

Query: 71 SLITHHS 77
            + +++
Sbjct: 77 EFVNYYT 83

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHY 48
          VLS +P G+F+VR+S+     F+LS R     HH  I  Y
Sbjct: 25 VLSNKPDGSFLVRDSSDDRYIFSLSFRSQGSVHHTRIEQY 64

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198277 cd10414, SH2_Grb14, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 14 (Grb14) proteins

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 9   VLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI-----KGF 62
           ++ Q  V G F+VR+S + P  F LS+      H   I H+ I+      ++      G 
Sbjct: 21  IIQQGLVDGVFLVRDSQSNPRTFVLSMS-----HGQKIKHFQIIPVEDDGELFHTLDDGH 75

Query: 63  TKEFSSLTSLITHHSVMPELLPCTLSLH 90
           T+ F+ L  L+  + +   +LPC L  +
Sbjct: 76  TR-FTDLIQLVEFYQLNKGVLPCKLKHY 102

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb14 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR) and weakly to the erbB2 receptor. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKG-FTKEFSSLTSLIT 74
          G+++VR S +    ++LSL+  K F H+ I      R   G  I G F++ F ++  +I 
Sbjct: 23 GSYLVRNSESTKQDYSLSLKSAKGFMHMRIQ-----RNETGQYILGQFSRPFETIPEMIR 77

Query: 75 HHSV 78
          H+ +
Sbjct: 78 HYCL 81

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198278 cd10415, SH2_Grb10, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 10 (Grb10) proteins

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 16  GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI-----KGFTKEFSSLT 70
           G F++R+S + P  F L+L      HH  I ++ IL      +       G TK FS L 
Sbjct: 29  GLFLLRDSQSNPKAFVLTL-----CHHQKIKNFQILPCEDDGQTFFSLDDGNTK-FSDLI 82

Query: 71  SLITHHSVMPELLPCTLSLH 90
            L+  + +   +LPC L  H
Sbjct: 83  QLVDFYQLNKGVLPCKLKHH 102

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb10 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198203 cd10340, SH2_N-SH2_SHP_like, N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G+F+ R S + PG F LS+R   E     + H  I  T   Y + G  K F++L+ L+ +
Sbjct: 23 GSFLARPSKSNPGDFTLSVRRGDE-----VTHIKIQNTGDYYDLYGGEK-FATLSELVQY 76

Query: 76 HSVMPELL 83
          +      L
Sbjct: 77 YMEQHGQL 84

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [IVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 16 GAFMVRESTTKPGCFALSL--RVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
          G F+VR S+T  G + +SL  +VP   H   + HY I + A+          F ++  LI
Sbjct: 29 GCFVVRNSST-KGLYTVSLFTKVPGSPH---VKHYHIKQNARSEFYLAEKHCFETIPELI 84

Query: 74 THH 76
           +H
Sbjct: 85 NYH 87

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 33.3 bits (76), Expect = 0.004
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F++R+S + PG +++SL+ P         H+ +      Y I    ++F ++  L+ H
Sbjct: 24 GDFLIRDSESNPGDYSVSLKAPGRNK-----HFKVQVVDNVYCIG--QRKFHTMDELVEH 76

Query: 76 HSVMP 80
          +   P
Sbjct: 77 YKKAP 81

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHL-----GIAHYL 49
          ++LS    G++++RES+   G + LSLR   +  +      G  HY 
Sbjct: 20 QLLSGASDGSYLIRESSRDDGYYTLSLRFNGKVKNYKLYYDGKNHYH 66

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.92
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.89
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.89
KOG1930|consensus	483		99.83
KOG4278|consensus	1157		99.75
KOG4637|consensus	464		99.72
KOG4637|consensus	464		99.69
KOG0197|consensus	468		99.67
KOG0790|consensus	600		99.67
KOG4226|consensus	379		99.65
KOG2996|consensus	865		99.63
KOG1264|consensus	1267		99.62
KOG4792|consensus	293		99.61
KOG1264|consensus	1267		99.58
KOG0790|consensus	600		99.45
KOG0194|consensus	474		99.3
KOG3601|consensus	222		99.11
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	98.74
KOG3751|consensus	622		98.54
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	97.56
KOG1856|consensus	1299		97.44
KOG4566|consensus	258		97.29
KOG3697|consensus	345		97.09
KOG1856|consensus	1299		96.35
PF02762	86	Cbl_N3: CBL proto-oncogene N-terminus, SH2-like do	96.16
KOG3667|consensus	682		92.58
smart00557	93	IG_FLMN Filamin-type immunoglobulin domains. These	86.8
KOG1785|consensus	563		86.29

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.92  E-value=2.1e-24  Score=121.52  Aligned_cols=86  Identities=37%  Similarity=0.570  Sum_probs=78.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+++|++.++|+||||.|++.++.|+||++..     +.++||+|...++++.+......|+||.|||+||+.++
T Consensus         7 i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~-----~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~~   81 (94)
T cd00173           7 ISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVK-----GKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKNP   81 (94)
T ss_pred             CCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEEC-----CEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhCc
Confidence            7899999999988999999999998899999999996     79999999999888776654678999999999999998


Q ss_pred             --CCcceeecCCC
Q psy3300          81 --ELLPCTLSLHR   91 (97)
Q Consensus        81 --~~l~~~L~~p~   91 (97)
                        +++.+.|+.|+
T Consensus        82 ~~~~~~~~L~~p~   94 (94)
T cd00173          82 LSDGLGVKLRYPV   94 (94)
T ss_pred             cCCCcccEeCCcC
Confidence              78889998884

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>smart00252 SH2 Src homology 2 domains

Probab=99.89  E-value=1.4e-22  Score=112.10  Aligned_cols=75  Identities=32%  Similarity=0.530  Sum_probs=68.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeC-CcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTA-KGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~-~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++|+++|.+.++|+||||.|++.++.|+||++..     +.++||+|...+ ++|.+.+ ...|+||.+||+||+.+
T Consensus         8 i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~-----~~~~h~~I~~~~~~~~~l~~-~~~F~sl~eLI~~y~~~   81 (84)
T smart00252        8 ISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVK-----GKVKHYRIRRNEDGKFYLDG-GRKFPSLVELVEHYQKN   81 (84)
T ss_pred             CCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEEC-----CEEEEEEEEECCCCcEEECC-CCccCCHHHHHHHHhhC
Confidence            6899999999988899999999998899999999995     899999999987 4588876 78999999999999987


Q ss_pred             CC
Q psy3300          80 PE   81 (97)
Q Consensus        80 ~~   81 (97)
                      ++
T Consensus        82 ~~   83 (84)
T smart00252       82 SL   83 (84)
T ss_pred             CC
Confidence            64

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.89  E-value=9.5e-23  Score=111.19  Aligned_cols=70  Identities=37%  Similarity=0.634  Sum_probs=64.5

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHh
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      |+|++|+++|+. .++|+||||.|.+.+|.|+||++..     +.++||+|.+.+++ |.+.+ ...|+||.+||+||
T Consensus         6 isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~-----~~v~h~~I~~~~~~~~~~~~-~~~F~sl~~LV~~y   77 (77)
T PF00017_consen    6 ISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFD-----GKVKHFRINRTENGGYFLSD-GKKFPSLSDLVEHY   77 (77)
T ss_dssp             SHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEET-----TEEEEEEEEEETTSEEESST-SSEBSSHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEeccccccccccccccc-----cccEEEEEEecCCceEEccC-CCcCCCHHHHHHhC
Confidence            689999999999 7999999999998899999999996     79999999999988 77765 67799999999998

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG1930|consensus

Probab=99.83  E-value=8.4e-21  Score=128.04  Aligned_cols=95  Identities=32%  Similarity=0.565  Sum_probs=85.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCC--------C--CCceeEEEEEEeCCcEEEecccC--CCCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEF--------H--HLGIAHYLILRTAKGYKIKGFTK--EFSS   68 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~--------~--~~~v~h~~I~~~~~~~~l~~~~~--~F~s   68 (97)
                      |||++|..||+++++|+||||+|.+.+|.|-|++++..+.        .  ...|+||.|+....|..|.|+.+  .|.|
T Consensus       219 isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLKGC~nEP~FGS  298 (483)
T KOG1930|consen  219 ISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLKGCDNEPVFGS  298 (483)
T ss_pred             CCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceeccCCCCCCccch
Confidence            7999999999999999999999999999999999986421        1  25799999999999999988755  5999


Q ss_pred             HHHHHHHhhhCCCCcceeecCCCCCCC
Q psy3300          69 LTSLITHHSVMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        69 l~~Lv~~y~~~~~~l~~~L~~p~~~p~   95 (97)
                      |..||-.|....+.|+|+|.+|.++|.
T Consensus       299 LSALV~QHSIt~LALPckL~iP~rDp~  325 (483)
T KOG1930|consen  299 LSALVYQHSITALALPCKLVIPDRDPL  325 (483)
T ss_pred             hHHHHhhccchhhhcceeEeccCCCcc
Confidence            999999999999999999999999984

>KOG4278|consensus

Probab=99.75  E-value=3.6e-18  Score=121.52  Aligned_cols=87  Identities=30%  Similarity=0.442  Sum_probs=79.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      +||..||.+|..-..|+||||+|++.+|+|+||++..     ++|.||+|.-..+| .++.. ...|.+|.|||.||...
T Consensus       159 vSRsaaEy~LsSgInGSFLVRESEsSpgQ~sISlRye-----GRVyHYRINt~~dgK~yvt~-EsrF~TLaELVHHHStv  232 (1157)
T KOG4278|consen  159 VSRSAAEYILSSGINGSFLVRESESSPGQYSISLRYE-----GRVYHYRINTDNDGKMYVTQ-ESRFRTLAELVHHHSTV  232 (1157)
T ss_pred             cccchhhhhhhcCcccceEEeeccCCCcceeEEEEec-----ceEEEEEeeccCCccEEEee-hhhhhHHHHHHhhcccc
Confidence            6899999999888999999999999999999999996     99999999988777 66654 77899999999999999


Q ss_pred             CCCcceeecCCCCC
Q psy3300          80 PELLPCTLSLHRYN   93 (97)
Q Consensus        80 ~~~l~~~L~~p~~~   93 (97)
                      .|||.|.|.+|..+
T Consensus       233 ADGLittLhYPApK  246 (1157)
T KOG4278|consen  233 ADGLITTLHYPAPK  246 (1157)
T ss_pred             ccceeEeeeccCcc
Confidence            99999999999643

>KOG4637|consensus

Probab=99.72  E-value=1.4e-17  Score=111.48  Aligned_cols=84  Identities=32%  Similarity=0.484  Sum_probs=75.7

Q ss_pred             CHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC--
Q psy3300           2 IQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM--   79 (97)
Q Consensus         2 sr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~--   79 (97)
                      .|..||.+|+..++|+||||.| ++.|+|++||...     +.|+|+.|..+..||.+..+.+.+.||.+||.||+..  
T Consensus       340 ~r~kAe~llrg~~dGtFLIR~s-s~~g~yalSV~~~-----~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~hY~h~SL  413 (464)
T KOG4637|consen  340 NRDKAEELLRGKPDGTFLIRES-SKGGCYALSVVHD-----GEVKHCLIYQTATGFGFAEPYNLYSTLKELVLHYQHTSL  413 (464)
T ss_pred             hHHHHHHHhcCCCCCeEEEeec-cCCCceEEEEEEC-----CceeeeEEeeccccccccchhHHHHHHHHHHHHHhhhhH
Confidence            5889999999999999999996 6899999999995     9999999999999999987677799999999999876  


Q ss_pred             ---CCCcceeecCCC
Q psy3300          80 ---PELLPCTLSLHR   91 (97)
Q Consensus        80 ---~~~l~~~L~~p~   91 (97)
                         .|.|.++|+.|.
T Consensus       414 e~HnDal~ttLr~Pv  428 (464)
T KOG4637|consen  414 EQHNDALTTTLRYPV  428 (464)
T ss_pred             Hhhccccccccccce
Confidence               567888999885

>KOG4637|consensus

Probab=99.69  E-value=5e-17  Score=108.80  Aligned_cols=85  Identities=25%  Similarity=0.305  Sum_probs=76.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |||+++...|.+.|+|+||||+.++.+|.|+|+++..     +.++-++|...++.|.+.+ ...|+|+.+||+||++.+
T Consensus        30 isReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~-----g~~KLikI~h~DgKyGF~d-~ltf~SVVelIn~yr~~S  103 (464)
T KOG4637|consen   30 ISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKG-----GNNKLIKIVHRDGKYGFSD-PLTFNSVVELINHYRNES  103 (464)
T ss_pred             cCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecC-----CccceeeeEEecCccCCCC-chhhHHHHHHHHHHhhhH
Confidence            7999999999999999999999888999999999994     8999999999988777665 889999999999999886


Q ss_pred             C-----CcceeecCCC
Q psy3300          81 E-----LLPCTLSLHR   91 (97)
Q Consensus        81 ~-----~l~~~L~~p~   91 (97)
                      +     .|.++|.+|.
T Consensus       104 L~~yN~~LDvrLlyPV  119 (464)
T KOG4637|consen  104 LAQYNPKLDVRLLYPV  119 (464)
T ss_pred             HHhhCcccceeeechH
Confidence            5     4668888883

>KOG0197|consensus

Probab=99.67  E-value=2.6e-16  Score=108.83  Aligned_cols=91  Identities=29%  Similarity=0.269  Sum_probs=76.6

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCC-CCCceeEEEEEEeCCc-EE--EecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEF-HHLGIAHYLILRTAKG-YK--IKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~-~~~~v~h~~I~~~~~~-~~--l~~~~~~F~sl~~Lv~   74 (97)
                      |||++||+.|..+  +.|+||||+|++.+|.|+|+++..... .+..|+||+|...++| ++  +.. ...|.+|.+||+
T Consensus        88 isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~-~~~F~~l~~lv~  166 (468)
T KOG0197|consen   88 ISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDE-RELFSSLQQLVN  166 (468)
T ss_pred             ccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCH-HHhhhhHHHHHh
Confidence            7899999666544  679999999999999999999986321 2458999999998876 55  543 777999999999


Q ss_pred             HhhhCCCCcceeecCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~   92 (97)
                      ||+.+++++...|..|+.
T Consensus       167 ~~~~~~~gl~~~l~~p~~  184 (468)
T KOG0197|consen  167 YYSKNADGLCTRLRDPCS  184 (468)
T ss_pred             hhhccCcchhhcccCchh
Confidence            999999999999998874

>KOG0790|consensus

Probab=99.67  E-value=4.5e-16  Score=106.58  Aligned_cols=91  Identities=29%  Similarity=0.408  Sum_probs=75.6

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecC----CCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPK----EFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH   75 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~----~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~   75 (97)
                      +|..+||.+|... ..|+||||+|.+.||.|+||++..+    +....+|.|..|.+.++.|-+.| ...|.||.+||+|
T Consensus       117 LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGg-ge~F~sltdLidh  195 (600)
T KOG0790|consen  117 LSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGG-GERFDSLTDLVEH  195 (600)
T ss_pred             CCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCC-ccccchHHHHHHH
Confidence            4678999999554 8999999999999999999999953    12246899999999887799866 8899999999999


Q ss_pred             hhhCCC----CcceeecCCCC
Q psy3300          76 HSVMPE----LLPCTLSLHRY   92 (97)
Q Consensus        76 y~~~~~----~l~~~L~~p~~   92 (97)
                      |.+++-    |-...|+.|..
T Consensus       196 ykknpmvEt~gtvv~LrqP~n  216 (600)
T KOG0790|consen  196 YKKNPMVETLGTVVYLRQPLN  216 (600)
T ss_pred             hccCchhhhcceeEEeecccc
Confidence            999853    45567887754

>KOG4226|consensus

Probab=99.65  E-value=6.3e-16  Score=100.40  Aligned_cols=73  Identities=25%  Similarity=0.484  Sum_probs=65.4

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|.+||.+|..+ .+|.||||+|++.+|.|++|++..     ++.+||++...++-|.| | ...|.++.+||+||++.
T Consensus       288 itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~-----grNKHFkVq~~d~~ycI-G-qRkF~tmd~Lv~HY~ka  360 (379)
T KOG4226|consen  288 ITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKAS-----GRNKHFKVQLVDNVYCI-G-QRKFHTMDELVEHYKKA  360 (379)
T ss_pred             ccHHHHHHHHhccCccCceEEecCCCCCcceeEEeecc-----CCCcceEEEEecceEEe-c-cceeccHHHHHHhhhcC
Confidence            6899999999655 899999999999999999999996     89999999877666776 4 88999999999999886


Q ss_pred             C
Q psy3300          80 P   80 (97)
Q Consensus        80 ~   80 (97)
                      +
T Consensus       361 P  361 (379)
T KOG4226|consen  361 P  361 (379)
T ss_pred             C
Confidence            4

>KOG2996|consensus

Probab=99.63  E-value=6.3e-16  Score=108.61  Aligned_cols=88  Identities=25%  Similarity=0.314  Sum_probs=76.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |-|++||..|+..+.|+||||.+....+.|+||++..     ..|+|++|...++.++|.. ...|+|+.|||+||+.++
T Consensus       692 MERaqaes~Lk~~~ngT~LVR~r~kea~e~AISikyn-----nevKHikI~~~dg~~~i~E-~k~F~sl~ELVeyYq~~s  765 (865)
T KOG2996|consen  692 MERAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYN-----NEVKHIKIETNDGKVHITE-DKKFNSLVELVEYYQSHS  765 (865)
T ss_pred             HhhhhhhhHhhcCCCceEEEEecccchhheeEEEEec-----cccceEEEEecCCeEEech-hhhhhhHHHHHHHHHhcc
Confidence            4689999999999999999999988899999999996     8999999998866688876 888999999999999997


Q ss_pred             C-----CcceeecCCCCCC
Q psy3300          81 E-----LLPCTLSLHRYNP   94 (97)
Q Consensus        81 ~-----~l~~~L~~p~~~p   94 (97)
                      +     .|...|+.|-..|
T Consensus       766 Lke~Fk~LDTtLk~Pyke~  784 (865)
T KOG2996|consen  766 LKEIFKALDTTLKFPYKEP  784 (865)
T ss_pred             HHHHHHHhhhhhcCCCcCh
Confidence            6     3557888886544

>KOG1264|consensus

Probab=99.62  E-value=2.8e-15  Score=108.46  Aligned_cols=87  Identities=28%  Similarity=0.311  Sum_probs=73.5

Q ss_pred             HHHHHHHhCC------CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeC-Cc---EEEecccCCCCCHHHH
Q psy3300           3 QEITLEVLSQ------EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTA-KG---YKIKGFTKEFSSLTSL   72 (97)
Q Consensus         3 r~~ae~~L~~------~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~-~~---~~l~~~~~~F~sl~~L   72 (97)
                      |.+|+.+|..      .++|+||||+|++..|.|+||++..     ++|.|++|.... +|   |++.+ +..|.||-+|
T Consensus       544 R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~-----grv~HcRIrsk~e~gt~Kyyl~d-N~vfdslY~L  617 (1267)
T KOG1264|consen  544 RTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRS-----GRVQHCRIRSKMEGGTLKYYLTD-NLVFDSLYAL  617 (1267)
T ss_pred             chHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeEC-----CceeeEEEEeeecCCceeEEEec-chhHHHHHHH
Confidence            7899999974      2699999999999999999999996     999999999764 33   88877 8899999999


Q ss_pred             HHHhhhCCCC---cceeecCCCCCCC
Q psy3300          73 ITHHSVMPEL---LPCTLSLHRYNPN   95 (97)
Q Consensus        73 v~~y~~~~~~---l~~~L~~p~~~p~   95 (97)
                      |.||+.+.+.   ....|+.|+++|.
T Consensus       618 I~~Y~~~~Lr~aeF~m~LtePvPqp~  643 (1267)
T KOG1264|consen  618 IQHYRETHLRCAEFEMRLTEPVPQPN  643 (1267)
T ss_pred             HHHHHhccccccceEEEecCCCCCCC
Confidence            9999998653   3368888776653

>KOG4792|consensus

Probab=99.61  E-value=4.2e-15  Score=94.29  Aligned_cols=73  Identities=29%  Similarity=0.517  Sum_probs=63.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEe--C------CcEEEecccCCCCCHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT--A------KGYKIKGFTKEFSSLTSL   72 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~--~------~~~~l~~~~~~F~sl~~L   72 (97)
                      |||+||..+|..+..|.||||+|++-+|.|+|+|+..     .+|.||.|...  .      .++.|.  ...|++|+.|
T Consensus        18 mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~-----srVshYiIn~~~p~~~~~~~~~~rIg--dQ~Fd~lPaL   90 (293)
T KOG4792|consen   18 MSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSEN-----SRVSHYIINSSPPSPAQPPPSRLRIG--DQEFDSLPAL   90 (293)
T ss_pred             ccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecC-----cceeeeeecCCCCCccCCCcceeeec--cccccchHHH
Confidence            7999999999988899999999999999999999985     88999999872  1      146664  7789999999


Q ss_pred             HHHhhhCC
Q psy3300          73 ITHHSVMP   80 (97)
Q Consensus        73 v~~y~~~~   80 (97)
                      ++||..+-
T Consensus        91 L~fykihy   98 (293)
T KOG4792|consen   91 LEFYKIHY   98 (293)
T ss_pred             HhheeEee
Confidence            99998764

>KOG1264|consensus

Probab=99.58  E-value=5.2e-15  Score=107.14  Aligned_cols=84  Identities=25%  Similarity=0.360  Sum_probs=71.2

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      .+|++||++|..- .+|+|||| +....+.|+||++..     ++++|++|.+.+.-|.+ | ...|+||.+||+||.++
T Consensus       655 ~treqAE~mL~rvp~DGaFLiR-~~~~~nsy~iSfr~~-----gkikHcRi~rdGr~fvl-~-t~~FesLv~lv~yY~k~  726 (1267)
T KOG1264|consen  655 LTREQAEDMLMRVPRDGAFLIR-KREGSNSYAISFRAR-----GKIKHCRINRDGRHFVL-G-TSAFESLVELVSYYEKH  726 (1267)
T ss_pred             ccHHHHHHHHhhCccCcceEEE-eccCCceEEEEEEEc-----CcEeEEEEccCceEEEe-c-cHHHHHHHHHHHHHhcC
Confidence            4799999999876 67999999 546688899999996     99999999876554665 4 66799999999999999


Q ss_pred             CCCcceeecCCCC
Q psy3300          80 PELLPCTLSLHRY   92 (97)
Q Consensus        80 ~~~l~~~L~~p~~   92 (97)
                      +.--.++|++|..
T Consensus       727 ~lyR~mkLr~PVn  739 (1267)
T KOG1264|consen  727 PLYRKMKLRYPVN  739 (1267)
T ss_pred             hhhhcccccCcCC
Confidence            8877789998853

>KOG0790|consensus

Probab=99.45  E-value=2.8e-13  Score=93.12  Aligned_cols=90  Identities=22%  Similarity=0.285  Sum_probs=78.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+..+||.+|+.. .+|+||.|.|++.+|.|+|+++..     +.+.|.+|...++-|.+.+ ...|.++.|||+||..+
T Consensus        11 ~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~-----~~v~hikiq~~~~~~~l~~-gekfat~~ELvqyyme~   84 (600)
T KOG0790|consen   11 LSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRG-----DKVTHIKIQNSGDFYDLYG-GEKFATLAELVQYYMEH   84 (600)
T ss_pred             ccchhHHHHHHHhccccchhhccccCCCcceeEEEEeC-----CceEEEEEeecCccccccC-CccccchHHHHHHHHhh
Confidence            4567999999876 899999999999999999999994     8999999987776688887 88999999999999887


Q ss_pred             C------CCcceeecCC--CCCCCC
Q psy3300          80 P------ELLPCTLSLH--RYNPNF   96 (97)
Q Consensus        80 ~------~~l~~~L~~p--~~~p~~   96 (97)
                      .      .|...-|++|  |.+|+-
T Consensus        85 ~~~lkekng~~ielK~pl~cAdpts  109 (600)
T KOG0790|consen   85 HGQLKEKNGDVIELKYPLNCADPTS  109 (600)
T ss_pred             hHHHHhcCCCEEEecCCCccCCchh
Confidence            5      5677888888  577763

>KOG0194|consensus

Probab=99.30  E-value=4.3e-11  Score=83.80  Aligned_cols=91  Identities=24%  Similarity=0.354  Sum_probs=72.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCe---e-EEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGC---F-ALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~---~-~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      +.|++|+.+|+.  +|+||||.|+...|.   + +||+....   ...++||.|...+++++..+ ...|+++.+||.||
T Consensus        56 l~red~~~lL~~--~GDfLvR~s~~~~~~~~~~~vlSv~~~~---~~~~~h~vi~~~~~~~~~~~-~~~F~si~~li~~~  129 (474)
T KOG0194|consen   56 LPREDAEKLLKN--DGDFLVRASEPKEGEKREFVVLSVKWSV---FKKIKHYVIKRNGNLFFFEG-LRKFPTISELVNYY  129 (474)
T ss_pred             ccHhHHHHHhCC--CCceEEEeecccCCcceeEEEEEEEeec---CCceeEEEEEEcCCeeEEec-cccCCcHHHHHHHH
Confidence            579999999977  799999999877652   3 78888731   25888999999888766665 78999999999999


Q ss_pred             hhCCCCcc---eeecCCCCCCCCC
Q psy3300          77 SVMPELLP---CTLSLHRYNPNFE   97 (97)
Q Consensus        77 ~~~~~~l~---~~L~~p~~~p~~~   97 (97)
                      ..+.....   ..|..|-..+.||
T Consensus       130 ~~~~~~~~~~~~~L~~PI~r~~We  153 (474)
T KOG0194|consen  130 KFSKLEITGKNFFLKRPIPRQKWE  153 (474)
T ss_pred             HhcccceeccceeecccccccccE
Confidence            98876543   4688887776664

>KOG3601|consensus

Probab=99.11  E-value=8.9e-12  Score=78.32  Aligned_cols=75  Identities=31%  Similarity=0.610  Sum_probs=65.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|..||++|....+|+||+|.+++.+|.|+++++..     ..|.|+++.+...| |++  +...|+++.+|++||..+
T Consensus        65 i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~-----d~vqhfkvvrpa~~k~~l--w~skfnslnplv~Y~rt~  137 (222)
T KOG3601|consen   65 IPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFP-----DGVQHFKVVRPAFGKYFL--WSSKFNSLNPLVSYHRTA  137 (222)
T ss_pred             cccchhhhhhhccCcchhhhhhhhcCcccccccccCC-----CCceeccccccCcccccc--chhhccCCCCCcccCccc
Confidence            5789999999998999999999999999999999995     89999999877655 665  377899999999999887


Q ss_pred             CCC
Q psy3300          80 PEL   82 (97)
Q Consensus        80 ~~~   82 (97)
                      +..
T Consensus       138 s~~  140 (222)
T KOG3601|consen  138 SQS  140 (222)
T ss_pred             ccc
Confidence            543

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=98.74  E-value=1.4e-07  Score=60.55  Aligned_cols=72  Identities=25%  Similarity=0.403  Sum_probs=55.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC------c--EEEecccCCCCCHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK------G--YKIKGFTKEFSSLTSL   72 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~------~--~~l~~~~~~F~sl~~L   72 (97)
                      ++-.+|+++|++.+.|.++||+|+.-.+..+++++..    .+...|+.|...+.      |  ..+ + ...|++|.||
T Consensus        44 ~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~----d~vyqHidV~E~~K~n~~slG~~L~i-~-~~~yeDLDEi  117 (220)
T PF14633_consen   44 FNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVA----DGVYQHIDVKEEDKENEFSLGKTLKI-G-GEEYEDLDEI  117 (220)
T ss_dssp             S-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEE----TTEEEEEEEEEECSSSTTS-SSEEEE-T-TEEESSHHHH
T ss_pred             CCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEc----CCcEEEEEEEECCCcCccccCcEEEE-C-CeEECCHHHH
Confidence            4678999999999999999999987778899999997    47788999988652      2  333 3 7789999999


Q ss_pred             HHHhhh
Q psy3300          73 ITHHSV   78 (97)
Q Consensus        73 v~~y~~   78 (97)
                      |.-|..
T Consensus       118 i~r~V~  123 (220)
T PF14633_consen  118 IARHVE  123 (220)
T ss_dssp             HHHCHH
T ss_pred             HHHHHH
Confidence            988754

>KOG3751|consensus

Probab=98.54  E-value=2.7e-08  Score=69.93  Aligned_cols=85  Identities=28%  Similarity=0.529  Sum_probs=70.8

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeC-Cc---EEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTA-KG---YKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~-~~---~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|+++..+++++  .+|.|++|+|.+.|..|++++...     .+++||.|.... .|   +.+.+....|.++..|++
T Consensus       526 is~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~-----~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~ql~~  600 (622)
T KOG3751|consen  526 ISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHP-----QKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQLVE  600 (622)
T ss_pred             cCchhhhhHHHhcccceeeeeecccccCcchhhhhccCC-----ccccceEEecCCCCCceeeccCCCCccccccccccc
Confidence            6899999988876  789999999999999999999885     899999998764 34   334333567999999999


Q ss_pred             HhhhCCCCcceeecCC
Q psy3300          75 HHSVMPELLPCTLSLH   90 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p   90 (97)
                      +|+-+...++|.|+.=
T Consensus       601 ~~ql~k~~l~~al~~~  616 (622)
T KOG3751|consen  601 FYQLNKGVLPCALKHC  616 (622)
T ss_pred             hhhcCCCcchHHHHHH
Confidence            9999988888887653

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=97.56  E-value=0.0002  Score=46.13  Aligned_cols=71  Identities=25%  Similarity=0.329  Sum_probs=49.9

Q ss_pred             HHHHHHHhCCC-----CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhh
Q psy3300           3 QEITLEVLSQE-----PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         3 r~~ae~~L~~~-----~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      +++++..|...     .--.|.+..+...||.|.|++....   ...+.+.-|.-..+||.+.  ...|+++.+|+.+++
T Consensus       143 ~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~---~~~~~~~~v~V~p~Gf~~r--~~~f~~~~~L~~~FK  217 (220)
T PF14633_consen  143 KEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNK---NPRHEYWPVKVTPDGFRFR--KQVFPSLDRLINWFK  217 (220)
T ss_dssp             CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESST---TS-EEEEEEEE-SSSEEET--TEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCC---CCceEEeeEEEecCcEEEe--cccCCCHHHHHHHHh
Confidence            45666777642     3356888888889999999998852   1333443377788999985  778999999999987


Q ss_pred             h
Q psy3300          78 V   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus       218 ~  218 (220)
T PF14633_consen  218 K  218 (220)
T ss_dssp             H
T ss_pred             h
Confidence            5

>KOG1856|consensus

Probab=97.44  E-value=0.0002  Score=54.97  Aligned_cols=73  Identities=19%  Similarity=0.274  Sum_probs=57.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC-c-EEEe-----cccCCCCCHHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK-G-YKIK-----GFTKEFSSLTSLI   73 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~-~-~~l~-----~~~~~F~sl~~Lv   73 (97)
                      ++-++|+.+|.....|.++||+|+......+++++..    .+...|+.|...+. + |.+.     + +..|++|.++|
T Consensus      1114 ~n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVs----D~iYqhidV~E~eKEn~fslg~~l~i~-~e~feDLDEiI 1188 (1299)
T KOG1856|consen 1114 LNAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVS----DGIYQHIDVQELEKENYFSLGKTLWIG-GEEFEDLDEII 1188 (1299)
T ss_pred             CCHHHHHHHHHhcccccEEeccccCCCCceEEEEEec----CchhhhhhhhhhhccccccccceEEEC-CcccccHHHHH
Confidence            4568999999998999999999988777888999887    46778888876432 1 3332     3 77899999999


Q ss_pred             HHhhh
Q psy3300          74 THHSV   78 (97)
Q Consensus        74 ~~y~~   78 (97)
                      .=|..
T Consensus      1189 ~r~vq 1193 (1299)
T KOG1856|consen 1189 ARYVQ 1193 (1299)
T ss_pred             HHHHH
Confidence            87754

>KOG4566|consensus

Probab=97.29  E-value=0.00077  Score=44.40  Aligned_cols=73  Identities=25%  Similarity=0.397  Sum_probs=52.7

Q ss_pred             CHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEE----eccc--CCCCCHHHHHHH
Q psy3300           2 IQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI----KGFT--KEFSSLTSLITH   75 (97)
Q Consensus         2 sr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l----~~~~--~~F~sl~~Lv~~   75 (97)
                      +.++|+..|...+.|+|+||+|...+-.+.|++...     .+.+.-+|.+.++.|..    .+..  ..|++...++.+
T Consensus        60 ~~~~~~~~l~~~p~~~~l~Rdss~~~~~~~I~vk~~-----~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e~~~~~~~~  134 (258)
T KOG4566|consen   60 TANEAELCLGQEPRGTFLVRDSSHRPYLFTISVKTH-----SGPKNLRIQYQDSSFRLDSSHRHTPPLISFEDVEVLIHH  134 (258)
T ss_pred             cchhHHHhhcCCCccceeeecCcCccccceeEeeec-----cCCCCccccccccceecccccccCCCcccChhHHHHHHh
Confidence            456777778778999999999987777788998885     45555566555543443    1212  369999999999


Q ss_pred             hhhC
Q psy3300          76 HSVM   79 (97)
Q Consensus        76 y~~~   79 (97)
                      |+..
T Consensus       135 y~~~  138 (258)
T KOG4566|consen  135 YRQS  138 (258)
T ss_pred             hhhh
Confidence            9554

>KOG3697|consensus

Probab=97.09  E-value=0.0012  Score=44.04  Aligned_cols=62  Identities=19%  Similarity=0.183  Sum_probs=38.9

Q ss_pred             CCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCCCCcc-----eeecCCCCCC
Q psy3300          26 KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLP-----CTLSLHRYNP   94 (97)
Q Consensus        26 ~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~~~l~-----~~L~~p~~~p   94 (97)
                      .+|.|+|+=..     ++..+|..+. ...|..-.. ...|+|+..||+||..+.+.+.     .+|+.|...+
T Consensus       278 ~~gqyvltgl~-----~~~~khlllv-dpegvvrtk-d~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r~  344 (345)
T KOG3697|consen  278 TPGQYVLTGLQ-----SGQPKHLLLV-DPEGVVRTK-DRRFDSISHLINYHMDNHLPIISAGSELCLQQPVERK  344 (345)
T ss_pred             CCccEEEeccc-----CCCcceEEEE-CCccceecc-cchhhHHHHHHHHhhhccCceecCcchhhhhCccccc
Confidence            45555555444     2566776654 233422222 6679999999999999876544     4677776543

>KOG1856|consensus

Probab=96.35  E-value=0.031  Score=43.62  Aligned_cols=72  Identities=17%  Similarity=0.265  Sum_probs=57.8

Q ss_pred             CHHHHHHHhCCC--CC---ceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHh
Q psy3300           2 IQEITLEVLSQE--PV---GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         2 sr~~ae~~L~~~--~~---G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      ++.+.+.+|...  ..   --|...-|...||.|.|+++..     ++++|--+.-...||.+.  +..|+||.+|+.|+
T Consensus      1212 t~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~-----~k~~heyv~v~p~g~~~r--g~~f~tld~L~~~F 1284 (1299)
T KOG1856|consen 1212 TKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPS-----SKPRHEYVKVVPEGFRFR--GQNFGTLDELCRWF 1284 (1299)
T ss_pred             CHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccC-----CCccceeEEEcccceEEe--cccchhHHHHHHHH
Confidence            356778888731  22   3456677888999999999985     889999888889998887  67899999999999


Q ss_pred             hhCC
Q psy3300          77 SVMP   80 (97)
Q Consensus        77 ~~~~   80 (97)
                      ..+-
T Consensus      1285 K~h~ 1288 (1299)
T KOG1856|consen 1285 KRHY 1288 (1299)
T ss_pred             HHHh
Confidence            8764

>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface

Probab=96.16  E-value=0.029  Score=30.37  Aligned_cols=36  Identities=19%  Similarity=0.302  Sum_probs=29.9

Q ss_pred             CHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEec
Q psy3300           2 IQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus         2 sr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +=+|+...|..  ..+|+|+.|-|.++-|.|.+-....
T Consensus        10 TYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~   47 (86)
T PF02762_consen   10 TYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQ   47 (86)
T ss_dssp             -HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEET
T ss_pred             eHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcC
Confidence            45677788874  4789999999999999999988875

The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....

>KOG3667|consensus

Probab=92.58  E-value=0.37  Score=35.95  Aligned_cols=47  Identities=17%  Similarity=0.285  Sum_probs=34.3

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEE
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLIL   51 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~   51 (97)
                      ++++.+..+|...++|+|++|-|++.-|..+++....+    ....++.|.
T Consensus       570 inkq~~~~ll~~~~~GtflLrfs~S~~GgiT~~~v~~~----~~~~~~~i~  616 (682)
T KOG3667|consen  570 INKQQERALLMTKPDGTFLLRFSASEEGGITIAWVEDQ----KQNLIMMIM  616 (682)
T ss_pred             cchhhhhhhhhcCCCCCceeeeeccccCceeEEecccc----cccceeEec
Confidence            46677788888889999999999888776666655542    222567776

>smart00557 IG_FLMN Filamin-type immunoglobulin domains

Probab=86.80  E-value=2.4  Score=23.33  Aligned_cols=24  Identities=21%  Similarity=0.501  Sum_probs=13.7

Q ss_pred             CCceEEEeecCCCCCeeEEEEEec
Q psy3300          14 PVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        14 ~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      .+|+|.+.-.....|.|.|++...
T Consensus        54 ~dGty~v~y~P~~~G~~~i~V~~~   77 (93)
T smart00557       54 GDGTYTVSYTPTEPGDYTVTVKFG   77 (93)
T ss_pred             CCCEEEEEEEeCCCEeEEEEEEEC
Confidence            455666665555555555555553

These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).

>KOG1785|consensus

Probab=86.29  E-value=1.3  Score=31.50  Aligned_cols=34  Identities=21%  Similarity=0.335  Sum_probs=28.1

Q ss_pred             HHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEec
Q psy3300           4 EITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus         4 ~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +|....|..  ..+|+|+.|-|.+..|.|.|-++..
T Consensus       266 DEVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt~  301 (563)
T KOG1785|consen  266 DEVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVTA  301 (563)
T ss_pred             HHHHHHHHHHhcCCCceEEeeccCcccceeEEEEcC
Confidence            556666654  3799999999999999999988876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	97
2kno_A	131	Nmr Solution Structure Of Sh2 Domain Of The Human T		5e-08
2l6k_A	123	Solution Structure Of A Nonphosphorylated Peptide R		5e-08
2ecd_A	119	Solution Structure Of The Human Abl2 Sh2 Domain Len		1e-05
4f59_A	112	Triple Mutant Src Sh2 Domain Length = 112		3e-05
1jyq_A	96	Xray Structure Of Grb2 Sh2 Domain Complexed With A		4e-05
1gri_A	217	Grb2 Length = 217		4e-05
2aoa_A	99	Crystal Structures Of A High-affinity Macrocyclic P		5e-05
1ghu_A	107	Nmr Solution Structure Of Growth Factor Receptor-Bo		5e-05
1kc2_A	103	Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c		5e-05
1cj1_A	96	Growth Factor Receptor Binding Protein Sh2 Domain (		5e-05
1bmb_A	123	Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-9		5e-05
3mxc_A	101	Structures Of Grb2-Sh2 Domain And Aicd Peptide Comp		5e-05
1tze_E	98	Signal Transduction Adaptor Growth Factor, Grb2 Sh2		5e-05
1zfp_E	98	Growth Factor Receptor Binding Protein Sh2 Domain C		6e-05
1fyr_A	114	Dimer Formation Through Domain Swapping In The Crys		6e-05
1x0n_A	104	Nmr Structure Of Growth Factor Receptor Binding Pro		6e-05
2h46_E	116	Native Domain-Swapped Dimer Crystal Structure Of Th		6e-05
3n84_A	112	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-05
3ove_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-05
3imd_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-05
1bm2_A	117	Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acet		6e-05
1fhs_A	112	The Three-Dimensional Solution Structure Of The Src		6e-05
3uf4_A	164	Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn P		1e-04
1ab2_A	109	Three-Dimensional Solution Structure Of The Src Hom		1e-04
1aot_F	106	Nmr Structure Of The Fyn Sh2 Domain Complexed With		1e-04
1g83_A	165	Crystal Structure Of Fyn Sh3-Sh2 Length = 165		1e-04
2abl_A	163	Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine K		2e-04
3k2m_A	112	Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN CO		2e-04
1a1a_A	107	C-Src (Sh2 Domain With C188a Mutation) Complexed Wi		2e-04
1skj_A	113	Cocrystal Structure Of Urea-Substituted Phosphopept		3e-04
1bkm_A	113	Cocrystal Structure Of D-Amino Acid Substituted Pho		3e-04
1bkl_A	113	Self-Associated Apo Src Sh2 Domain Length = 113		3e-04
1is0_A	106	Crystal Structure Of A Complex Of The Src Sh2 Domai		3e-04
1sha_A	104	Crystal Structure Of The Phosphotyrosine Recognitio		3e-04
1p13_A	102	Crystal Structure Of The Src Sh2 Domain Complexed W		3e-04
1nzl_A	103	Crystal Structure Of Src Sh2 Domain Bound To Doubly		3e-04
1f1w_A	104	Src Sh2 Thref1trp Mutant Complexed With The Phospho		3e-04
3t04_A	123	Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN C		3e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-04
1shd_A	107	Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein In		4e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-04
1o41_A	108	Crystal Structure Of Sh2 In Complex With Ru78300. L		4e-04
1o4c_A	108	Crystal Structure Of Sh2 In Complex With Phosphate.		4e-04
1bfi_A	112	Solution Structure Of The C-Terminal Sh2 Domain Of		4e-04
1qad_A	111	Crystal Structure Of The C-Terminal Sh2 Domain Of T		5e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-04
1h9o_A	112	Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C		6e-04

>pdb|2KNO|A Chain A, Nmr Solution Structure Of Sh2 Domain Of The Human Tensin Like C1 Domain Containing Phosphatase (Tenc1) Length = 131

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 1   MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----PKEFHHLG------IAHYLI 50
           + ++  + +L  +  GAF++R+S +  G + L+L+V    P      G      + H+LI
Sbjct: 27  LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLI 86
Query: 51  LRTAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
               KG KIKG   E  F SL++L++ HS+ P  LPC L +
Sbjct: 87  ETGPKGVKIKGCPSEPYFGSLSALVSQHSISPISLPCCLRI 127

>pdb|2L6K|A Chain A, Solution Structure Of A Nonphosphorylated Peptide Recognizing Domain Length = 123

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 3   QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRV----PKEFHHLG------IAHYLILR 52
           ++  + +L  +  GAF++R+S +  G + L+L+V    P      G      + H+LI  
Sbjct: 14  RDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIET 73
Query: 53  TAKGYKIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
             KG KIKG   E  F SL++L++ HS+ P  LPC L +
Sbjct: 74  GPKGVKIKGCPSEPYFGSLSALVSQHSISPISLPCCLRI 112

>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain Length = 119

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 16  GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
           G+F+VRES + PG  ++SLR         + HY I  TA G         FS+L  L+ H
Sbjct: 38  GSFLVRESESSPGQLSISLRYEGR-----VYHYRINTTADGKVYVTAESRFSTLAELVHH 92
Query: 76  HSVMPELLPCTL 87
           HS + + L  TL
Sbjct: 93  HSTVADGLVTTL 104

>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain Length = 112

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSL 69
          ++ P G F+VRES T  G +ALS+        L + HYLI +  + G+ I   T +F+SL
Sbjct: 28 AENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFYITSRT-QFNSL 86
Query: 70 TSLITHHS 77
            L+ ++S
Sbjct: 87 QQLVAYYS 94

>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly Affine Phospho Peptide Length = 96

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 70
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 71 NSLNELVDYH 80

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8   EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 72  EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 125
Query: 67  SSLTSLITHH 76
           +SL  L+ +H
Sbjct: 126 NSLNELVDYH 135

>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide Mimetic In Complex With The Grb2 Sh2 Domain Length = 99

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 18 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 71
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 72 NSLNELVDYH 81

>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound Protein 2 (Grb2) Sh2 Domain, 24 Structures Length = 107

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 15 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 68
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 69 NSLNELVDYH 78

>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala, Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The Pqpyeeipi Peptide Length = 103

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L +AHY I +  + G+ I   T +FSSL 
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKLDSGGFYITSRT-QFSSLQ 80
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 81 QLVAYYS 87

>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human) Complexed With A Phosphotyrosyl Derivative Length = 96

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 16 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 69
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 70 NSLNELVDYH 79

>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974) Length = 123

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 27 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 80
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 81 NSLNELVDYH 90

>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Reveal A Conformational Switch And Their Functional Implications. Length = 101

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 21 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 74
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 75 NSLNELVDYH 84

>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain Complexed With Phosphotyrosyl Heptapeptide Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2) Length = 98

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 18 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 71
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 72 NSLNELVDYH 81

>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain Complexed With A Phosphotyrosyl Pentapeptide Length = 98

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 70
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 71 NSLNELVDYH 80

>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal Structure Of The Grb2-Sh2 Ac-Pyvnv Complex Length = 114

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 25 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 78
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 79 NSLNELVDYH 88

>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein Sh2 Domain Complexed With The Inhibitor Length = 104

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 70
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 71 NSLNELVDYH 80

>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2 Sh2 Domain Length = 116

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 20 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 73
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 74 NSLNELVDYH 83

>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A 23-Membered Macrocyclic Ligand Having The Sequence Pyvnvp Length = 112

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 21 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 74
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 75 NSLNELVDYH 84

>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Pyxn- Derived Tripeptide Length = 117

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 20 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 73
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 74 NSLNELVDYH 83

>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic Length = 117

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 20 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 73
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 74 NSLNELVDYH 83

>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acetyl-L-Thi Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl] (Pkf273-791) Length = 117

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 26 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 79
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 80 NSLNELVDYH 89

>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src Homology Domain-2 Of The Growth Factor Receptor Bound Protein-2, Nmr, 18 Structures Length = 112

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 8  EVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS Q   GAF++RES + PG F+LS++   +     + H+ +LR   G K   +  +F
Sbjct: 21 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGND-----VQHFKVLRDGAG-KYFLWVVKF 74
Query: 67 SSLTSLITHH 76
          +SL  L+ +H
Sbjct: 75 NSLNELVDYH 84

>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein (Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus Musculus At 1.98 A Resolution Length = 164

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
           P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 89  PRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 148
Query: 74  THHSVMPELLPCTLSL 89
            H+S   + L   L++
Sbjct: 149 QHYSEKADGLCFNLTV 164

>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology 2 Domain Of C-Abl Length = 109

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
          +LS    G+F+VRES + PG  ++SLR         + HY I   + G         F++
Sbjct: 24 LLSSGINGSFLVRESESSPGQRSISLRYEGR-----VYHYRINTASDGKLYVSSESRFNT 78
Query: 69 LTSLITHHSVMPELLPCTL 87
          L  L+ HHS + + L  TL
Sbjct: 79 LAELVHHHSTVADGLITTL 97

>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A Phosphotyrosyl Peptide, Minimized Average Structure Length = 106

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
           P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 27  PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 86
Query: 74  THHSVMPELLPCTL 87
            H+S     L   L
Sbjct: 87  QHYSERAAGLSSRL 100

>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2 Length = 165

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
           P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 88  PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 147
Query: 74  THHSVMPELLPCTL 87
            H+S     L   L
Sbjct: 148 QHYSERAAGLSSRL 161

>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase Length = 163

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
           +LS    G+F+VRES + PG  ++SLR         + HY I   + G         F++
Sbjct: 85  LLSSGINGSFLVRESESSPGQRSISLRYEGR-----VYHYRINTASDGKLYVSSESRFNT 139
Query: 69  LTSLITHHSVMPELLPCTL 87
           L  L+ HHS + + L  TL
Sbjct: 140 LAELVHHHSTVADGLITTL 158

>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX Length = 112

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
          +LS    G+F+VRES + PG  ++SLR         + HY I   + G         F++
Sbjct: 20 LLSSGINGSFLVRESESSPGQRSISLRYEGR-----VYHYRINTASDGKLYVSSESRFNT 74
Query: 69 LTSLITHHSVMPELLPCTL 87
          L  L+ HHS + + L  TL
Sbjct: 75 LAELVHHHSTVADGLITTL 93

>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine) Length = 107

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSL 69
          ++ P G F+VRES T  G ++LS+        L + HY I +  + G+ I   T +F+SL
Sbjct: 26 AENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFNSL 84
Query: 70 TSLITHHS 77
            L+ ++S
Sbjct: 85 QQLVAYYS 92

>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 82
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 83 QLVAYYS 89

>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 82
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 83 QLVAYYS 89

>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain Length = 113

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 82
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 83 QLVAYYS 89

>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With Conformationally Constrained Peptide Inhibitor Length = 106

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 81
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 82 QLVAYYS 88

>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides Length = 104

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 81
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 82 QLVAYYS 88

>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With Peptide (Sdpyanfk) Length = 102

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 80
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 81 QLVAYYS 87

>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly Phosphorylated Peptide Pqpyepyipi Length = 103

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 80
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 81 QLVAYYS 87

>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide S(Ptr)vnvqn Length = 104

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
          + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIWSRT-QFSSLQ 81
Query: 71 SLITHHS 77
           L+ ++S
Sbjct: 82 QLVAYYS 88

>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX Length = 123

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
           +LS    G+F+VRES + PG  ++SLR         + HY I   + G         F++
Sbjct: 31  LLSSGINGSFLVRESESSPGQRSISLRYEGR-----VYHYRINTASDGKLYVSSESRFNT 85
Query: 69  LTSLITHHSVMPELLPCTL 87
           L  L+ HHS + + L  TL
Sbjct: 86  LAELVHHHSTVADGLITTL 104

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
           +LS    G+F+VRES + PG  ++SLR     +     HY I   + G         F++
Sbjct: 120 LLSSGINGSFLVRESESSPGQRSISLRYEGRVY-----HYRINTASDGKLYVSSESRFNT 174
Query: 69  LTSLITHHSVMPELLPCTL 87
           L  L+ HHS + + L  TL
Sbjct: 175 LAELVHHHSTVADGLITTL 193

>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein Interactions Length = 107

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSL 69
          ++ P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +F+SL
Sbjct: 26 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFNSL 84
Query: 70 TSLITHHS 77
            L+ ++S
Sbjct: 85 QQLVAYYS 92

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSS 68
           +LS    G+F+VRES + PG  ++SLR     +     HY I   + G         F++
Sbjct: 159 LLSSGINGSFLVRESESSPGQRSISLRYEGRVY-----HYRINTASDGKLYVSSESRFNT 213
Query: 69  LTSLITHHSVMPELLPCTL 87
           L  L+ HHS + + L  TL
Sbjct: 214 LAELVHHHSTVADGLITTL 232

>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300. Length = 108

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSL 69
          ++ P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +F+SL
Sbjct: 24 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFNSL 82
Query: 70 TSLITHHSVMPELL 83
            L+ ++S   + L
Sbjct: 83 QQLVAYYSKHADGL 96

>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate. Length = 108

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSL 69
          ++ P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +F+SL
Sbjct: 24 AENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFNSL 82
Query: 70 TSLITHHSVMPELL 83
            L+ ++S   + L
Sbjct: 83 QQLVAYYSKHADGL 96

>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The P85alpha Regulatory Subunit Of Phosphoinositide 3-Kinase, Nmr, 30 Structures Length = 112

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRES+ K GC+A S+ V  E     + H +I +TA GY        +SSL  L+ H
Sbjct: 32 GTFLVRESS-KQGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYSSLKELVLH 85
Query: 76 H 76
          +
Sbjct: 86 Y 86

>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85 Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase: An Sh2 Domain Mimicking Its Own Substrate Length = 111

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRES+ K GC+A S+ V  E     + H +I +TA GY        +SSL  L+ H
Sbjct: 31 GTFLVRESS-KQGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYSSLKELVLH 84
Query: 76 H 76
          +
Sbjct: 85 Y 85

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 12  QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR-TAKGYKIKGFTKEFSSLT 70
           + P G F+VRES T  G + LS+        L + HY I +  + G+ I   T +FSSL 
Sbjct: 86  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRT-QFSSLQ 144
Query: 71  SLITHHS 77
            L+ ++S
Sbjct: 145 QLVAYYS 151

>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-Terminal Sh2 Domain Complexed With A Tyr751 Phosphopeptide From The Pdgf Receptor, Crystal Structure At 1.79 A Length = 112

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRES+ K GC+A S+ V  E     + H +I +TA GY        +SSL  L+ H
Sbjct: 32 GTFLVRESS-KQGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYSSLKELVLH 85
Query: 76 H 76
          +
Sbjct: 86 Y 86

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	1e-27
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	1e-18
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	1e-18
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	2e-18
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	7e-18
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	1e-17
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-17
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	3e-17
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	3e-17
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	7e-17
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	9e-17
2dly_A	121	FYN-related kinase; BRK family kinase, structural	1e-16
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	4e-16
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	4e-16
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	5e-16
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	5e-16
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	6e-16
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	7e-16
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	1e-15
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	1e-15
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	2e-15
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	2e-15
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	2e-15
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	5e-15
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	5e-15
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	6e-15
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	7e-15
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	7e-15
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	1e-12
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	7e-15
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	8e-15
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-13
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	9e-15
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	9e-15
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	1e-14
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	6e-14
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	7e-14
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	9e-10
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	1e-13
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	1e-13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-13
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	2e-13
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	2e-13
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	5e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-13
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	9e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-12
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	2e-12
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	3e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-12
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	3e-12
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	4e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	9e-08
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	7e-12
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	9e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	9e-12
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	2e-11
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	3e-11
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	3e-10
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	3e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-09
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	4e-09
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	5e-09
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	6e-09
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	9e-09
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-07
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	7e-07
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	2e-06
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	3e-06
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	3e-06
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	7e-06
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	8e-04
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-05
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	3e-04
1uur_A	473	Stata protein, STAT protein; transcription activat	4e-04

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 96.5 bits (240), Expect = 1e-27
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLG----------IAHYLILRTAKGY 57
            +L  +  GAF++R+S +  G + L+L+V                  + H+LI    KG 
Sbjct: 34  ALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGV 93

Query: 58  KIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
           KIKG   E  F SL++L++ HS+ P  LPC L +
Sbjct: 94  KIKGCPSEPYFGSLSALVSQHSISPISLPCCLRI 127

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 73.1 bits (180), Expect = 1e-18
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
           P G F++RES T  G ++LS+R   +     + HY I +   G Y I    + F +L  L
Sbjct: 27  PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQ-FETLQQL 85

Query: 73  ITHHSVMPELLPCTL 87
           + H+S     L   L
Sbjct: 86  VQHYSERAAGLSSRL 100

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 72.6 bits (179), Expect = 1e-18
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L     G F+VREST  PG + L +          + HY I+  A    I      F 
Sbjct: 22 RLLYPPETGLFLVRESTNYPGDYTLCVS-----SDGKVEHYRIMYHASKLSIDEEVY-FE 75

Query: 68 SLTSLITHHSVMPELLPCTL 87
          +L  L+ H++   + L   L
Sbjct: 76 NLMQLVEHYTSDADGLCTRL 95

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 72.3 bits (178), Expect = 2e-18
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
            G+F++RES +  G F+LS+R   +     + HY I     G + I      F  L  L
Sbjct: 26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRIT-FPGLHEL 84

Query: 73 ITHHSVMPELLPCTL 87
          + H++   + L   L
Sbjct: 85 VRHYTNASDGLCTRL 99

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 71.2 bits (175), Expect = 7e-18
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE----FSSL 69
             G F+VRES   P  F LSL      H   + HYLIL + +  ++     +    F+ L
Sbjct: 36  VDGLFLVRESQRNPQGFVLSLC-----HLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDL 90

Query: 70  TSLITHHSVMPELLPCTL 87
             L+  H +   +LPC L
Sbjct: 91  LQLVEFHQLNRGILPCLL 108

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 70.4 bits (173), Expect = 1e-17
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
            +LS    G+F+VRES + PG  ++SLR     +   + HY I  TA G   +   ++ F
Sbjct: 30  YLLSSLINGSFLVRESESSPGQLSISLR-----YEGRVYHYRINTTADGKVYVTAESR-F 83

Query: 67  SSLTSLITHHSVMPELLPCTL 87
           S+L  L+ HHS + + L  TL
Sbjct: 84  STLAELVHHHSTVADGLVTTL 104

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 69.5 bits (171), Expect = 2e-17
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
          + L     G F+VRES   PG + L +          + HY +L       I      F 
Sbjct: 19 QQLQPPEDGLFLVRESARHPGDYVLCVS-----FGRDVIHYRVLHRDGHLTIDEAVF-FC 72

Query: 68 SLTSLITHHSVMPELLPCTL 87
          +L  ++ H+S     +   L
Sbjct: 73 NLMDMVEHYSKDKGAICTKL 92

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 69.6 bits (171), Expect = 3e-17
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           +L    V G+F+ R S + PG F LS+R      +  + H  I  T   Y + G  K F
Sbjct: 21 NLLLTRGVDGSFLARPSKSNPGDFTLSVR-----RNGAVTHIKIQNTGDYYDLYGGEK-F 74

Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
          ++L  L+ ++      L       
Sbjct: 75 ATLAELVQYYMEHHGQLKEKNGDV 98

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 69.2 bits (170), Expect = 3e-17
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
             G F++R+S + P  F L+L      HH  I ++ IL         + +     +FS L
Sbjct: 27  VDGLFLLRDSQSNPKAFVLTLC-----HHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDL 81

Query: 70  TSLITHHSVMPELLPCTLS 88
             L+  + +   +LPC L 
Sbjct: 82  IQLVDFYQLNKGVLPCKLK 100

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 68.4 bits (168), Expect = 7e-17
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
           +LS    G+F+VRES + PG  ++SLR     +   + HY I   + G   +   ++ F
Sbjct: 19 YLLSSGINGSFLVRESESSPGQRSISLR-----YEGRVYHYRINTASDGKLYVSSESR-F 72

Query: 67 SSLTSLITHHSVMPELLPCTL 87
          ++L  L+ HHS + + L  TL
Sbjct: 73 NTLAELVHHHSTVADGLITTL 93

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 68.5 bits (168), Expect = 9e-17
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 11/86 (12%)

Query: 8   EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKG 61
           E+LS+    G+F+VR S +    +AL +      +   +  Y IL               
Sbjct: 24  ELLSRTGKDGSFLVRASESISRAYALCVL-----YRNCVYTYRILPNEDDKFTVQASEGV 78

Query: 62  FTKEFSSLTSLITHHSVMPELLPCTL 87
             + F+ L  LI  +      L   L
Sbjct: 79  SMRFFTKLDQLIEFYKKENMGLVTHL 104

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 68.5 bits (168), Expect = 1e-16
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             GAF++RES ++ G F+LS+          + HY I R  +G + +      FS+L   
Sbjct: 38  QTGAFLIRESESQKGDFSLSVL-----DEGVVKHYRIRRLDEGGFFLTRRKV-FSTLNEF 91

Query: 73  ITHHSVMPELLPCTL 87
           + +++   + L   L
Sbjct: 92  VNYYTTTSDGLCVKL 106

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 67.0 bits (164), Expect = 4e-16
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE----FSSL 69
             G F+VR+S + P  F LS+      H   I H+ I+      ++     +    F+ L
Sbjct: 48  VDGVFLVRDSQSNPKTFVLSMS-----HGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDL 102

Query: 70  TSLITHHSVMPELLPCTL 87
             L+  + +   +LPC L
Sbjct: 103 IQLVEFYQLNKGVLPCKL 120

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 66.9 bits (164), Expect = 4e-16
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 8   EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           E+LS++   GAF++RES + PG F+LS++         + H+ +LR   G       K F
Sbjct: 20  EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLWVVK-F 73

Query: 67  SSLTSLITHHSVMPELLPCTLSLHRYNP 94
           +SL  L+ +H          + L     
Sbjct: 74  NSLNELVDYHRSTSVSRNQQIFLRDIEQ 101

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 66.5 bits (163), Expect = 5e-16
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 10  LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
           ++   V +F+VR S   PG ++L  R      +  I  + I  T     + G    ++S+
Sbjct: 33  MTVGQVCSFLVRPSDNTPGDYSLYFR-----TNENIQRFKICPTPNNQFMMGGRY-YNSI 86

Query: 70  TSLITHHSVMPELLPCTL 87
             +I H+     +    L
Sbjct: 87  GDIIDHYRKEQIVEGYYL 104

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 66.0 bits (162), Expect = 5e-16
 Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
            GAF++R S      + LS+R         + HY I R A G   +      F SL  L
Sbjct: 24 ATGAFLIRVSEKPSADYVLSVR-----DTQAVRHYKIWRRAGGRLHLNEAVS-FLSLPEL 77

Query: 73 ITHHSVMPELLPCTL 87
          + +H          L
Sbjct: 78 VNYHRAQSLSHGLRL 92

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 66.5 bits (163), Expect = 6e-16
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L     G +++RE   +   FA+S++   E     + H  ++       I    K F 
Sbjct: 30 NLLKSHASGTYLIRERPAEAERFAISIKFNDE-----VKHIKVVEKDNWIHITEAKK-FD 83

Query: 68 SLTSLITHHSVMP 80
          SL  L+ ++    
Sbjct: 84 SLLELVEYYQCHS 96

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 65.8 bits (161), Expect = 7e-16
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 10/83 (12%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKGFTK 64
          L     G F++R+S + PG   L +          +  Y I R   GY            
Sbjct: 20 LKGGVDGNFLIRDSESVPGALCLCVS-----FKKLVYSYRIFREKHGYYRIETDAHTPRT 74

Query: 65 EFSSLTSLITHHSVMPELLPCTL 87
           F +L  L++ +    + L   L
Sbjct: 75 IFPNLQELVSKYGKPGQGLVVHL 97

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 65.4 bits (160), Expect = 1e-15
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
             L  +  G F+VR+S+T PG + LS+       +  ++HY+I          G  +EF 
Sbjct: 33  TRLQGQRHGMFLVRDSSTCPGDYVLSVS-----ENSRVSHYIINSLPNRRFKIG-DQEFD 86

Query: 68  SLTSLITHHSVMPELLPCTL 87
            L +L+  + +   L   TL
Sbjct: 87  HLPALLEFYKIHY-LDTTTL 105

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 64.9 bits (159), Expect = 1e-15
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L  + +G F++R S + PG F++S+R     H   + H+ ++R  KG      T++F 
Sbjct: 23 NLLMGKDIGFFIIRASQSSPGDFSISVR-----HEDDVQHFKVMRDTKGNYFLW-TEKFP 76

Query: 68 SLTSLITHHSVMP 80
          SL  L+ ++    
Sbjct: 77 SLNKLVDYYRTTS 89

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 65.1 bits (159), Expect = 2e-15
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             G+F++RES +  G F+LS++         + HY I     G Y I      F +L +L
Sbjct: 34  KAGSFLIRESESNKGAFSLSVKDITTQGE-VVKHYKIRSLDNGGYYISPRIT-FPTLQAL 91

Query: 73  ITHHSVMPELLPCTL 87
           + H+S   + L   L
Sbjct: 92  VQHYSKKGDGLCQKL 106

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 68.2 bits (166), Expect = 2e-15
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           E+LS +  G F++RES+   GC+A S+ V  +  H      +I RTA G+        + 
Sbjct: 208 EMLSGKRDGTFLIRESSQ-RGCYACSVVVDGDTKH-----CVIYRTATGFGFAEPYNLYG 261

Query: 68  SLTSLITHHSVMP-----ELLPCTL 87
           SL  L+ H+         + L  TL
Sbjct: 262 SLKELVLHYQHASLVQHNDALTVTL 286

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 65.0 bits (159), Expect = 2e-15
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
            +L  +P+G+F++R S +  G + LS +           H+++     G + I G     
Sbjct: 30  NLLESQPLGSFLIRVSHSHVG-YTLSYK-----AQSSCCHFMVKLLDDGTFMIPGEKVAH 83

Query: 67  SSLTSLITHHSVMPELLPCTL 87
           +SL +L+T H   P      L
Sbjct: 84  TSLDALVTFHQQKPIEPRREL 104

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 64.4 bits (157), Expect = 5e-15
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKE--- 65
          L+    G++++R+S + PG + L +      +H  I  Y + +T  G +  +        
Sbjct: 21 LATGLDGSYLLRDSESVPGVYCLCVL-----YHGYIYTYRVSQTETGSWSAETAPGVHKR 75

Query: 66 -FSSLTSLITHHSVMPELLPCTL 87
           F  + +LI+      + +   L
Sbjct: 76 YFRKIKNLISAFQKPDQGIVIPL 98

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 63.9 bits (156), Expect = 5e-15
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
            +L  +  G F+VRES+   GC+A S+ V  E     + H +I +TA GY        +S
Sbjct: 24  NLLRGKRDGTFLVRESSK-QGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYS 77

Query: 68  SLTSLITHHSVMP-----ELLPCTL 87
           SL  L+ H+         + L  TL
Sbjct: 78  SLKELVLHYQHTSLVQHNDSLNVTL 102

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 63.5 bits (155), Expect = 6e-15
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKE--- 65
          L+    G++++R+S + PG + L +      +H  I  Y + +T  G +  +        
Sbjct: 21 LATGLDGSYLLRDSESVPGVYCLCVL-----YHGYIYTYRVSQTETGSWSAETAPGVHKR 75

Query: 66 -FSSLTSLITHHSVMPELLPCTL 87
           F  + +LI+      + +   L
Sbjct: 76 YFRKIKNLISAFQKPDQGIVIPL 98

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 63.4 bits (155), Expect = 7e-15
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 8   EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG--YKIKGFT 63
           ++L Q+   GAFMVR S+   G + +SL         G + HY +   A+   Y  + + 
Sbjct: 25  QLLRQKGKEGAFMVRNSSQ-VGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYC 83

Query: 64  KEFSSLTSLITHHSVMPELLPCTL 87
             F S+  LI +H      +   L
Sbjct: 84  --FDSIPKLIHYHQHNSAGMITRL 105

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 66.5 bits (162), Expect = 7e-15
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 8   EVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTK 64
           + L Q     G +++R+S    G FALS+      H     HY I R   G Y I G   
Sbjct: 19  DYLVQGGMSDGLYLLRQSRNYLGGFALSVA-----HGRKAHHYTIERELNGTYAIAGGRT 73

Query: 65  EFSSLTSLITHHSVMPELLPCTLSLHRYNPN 95
             +S   L  +HS   + L C L      P 
Sbjct: 74  -HASPADLCHYHSQESDGLVCLLKKPFNRPQ 103

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 60.3 bits (146), Expect = 1e-12
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             G F++R      G +AL L    +     + HY I +   G   I    K F +L  L
Sbjct: 180 TNGKFLIRARDN-NGSYALCLLHEGK-----VLHYRIDKDKTGKLSIPEGKK-FDTLWQL 232

Query: 73  ITHHSVMPELLPCTL 87
           + H+S   + L   L
Sbjct: 233 VEHYSYKADGLLRVL 247

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 64.3 bits (157), Expect = 7e-15
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
            +L+    G F+VR+       FA+S++     +++ + H  I+     Y+I    K F 
Sbjct: 40  SILANRSDGTFLVRQRVKDAAEFAISIK-----YNVEVKHIKIMTAEGLYRITE-KKAFR 93

Query: 68  SLTSLITHHS 77
            LT L+  + 
Sbjct: 94  GLTELVEFYQ 103

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 66.1 bits (161), Expect = 8e-15
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             G F++R+     G + LSL      H +   H+ I R   G Y I G  K       L
Sbjct: 28  ADGLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAG-GKAHCGPAEL 81

Query: 73  ITHHSVMPELLPCTLSLHRYNPNF 96
              +S  P+ LPC L      P+ 
Sbjct: 82  CEFYSRDPDGLPCNLRKPCNRPSG 105

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 62.6 bits (152), Expect = 2e-13
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             G F++R      G +ALSL      +   + HYLI +   G Y I   TK F +L  L
Sbjct: 181 TDGKFLLRPRKE-QGTYALSLI-----YGKTVYHYLISQDKAGKYCIPEGTK-FDTLWQL 233

Query: 73  ITHHSVMPELLPCTL 87
           + +  +  + L   L
Sbjct: 234 VEYLKLKADGLIYCL 248

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 62.6 bits (153), Expect = 9e-15
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 8  EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS++   GAF++RES + PG F+LS++         + H+ +LR   G       K F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLWVVK-F 70

Query: 67 SSLTSLITHHSVMPELLPCTLSL 89
          +SL  L+ +H          + L
Sbjct: 71 NSLNELVDYHRSTSVSRNQQIFL 93

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 63.5 bits (155), Expect = 9e-15
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 8   EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG-YKIKGFTK 64
            +L QE   GAF+VR+S    G + +S+ +         I HY I +   G + +     
Sbjct: 30  HLLRQESKEGAFIVRDSRH-LGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHA 88

Query: 65  EFSSLTSLITHHSVMPELLPCTL 87
            F S+  LI +H      L   L
Sbjct: 89  -FQSIPELIWYHQHNAAGLMTRL 110

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 63.1 bits (154), Expect = 1e-14
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 8   EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG-YKIKGFTK 64
           ++L QE   G F+VR+S+   G + +S+         G I HY++  T +  Y +     
Sbjct: 25  QLLKQEGKEGGFIVRDSSK-AGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHL 83

Query: 65  EFSSLTSLITHHSVMPELLPCTL 87
            FS++  LI +H      L   L
Sbjct: 84  -FSTIPELINYHQHNSAGLISRL 105

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 60.7 bits (148), Expect = 6e-14
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
            L++  V G F++R+S + P  F++SL+           H+ +      Y I    + F
Sbjct: 19 CALNERGVEGDFLIRDSESSPSDFSVSLK-----ASGKNKHFKVQLVDNVYCIGQ--RRF 71

Query: 67 SSLTSLITHHSVMP 80
           ++  L+ H+   P
Sbjct: 72 HTMDELVEHYKKAP 85

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 63.4 bits (154), Expect = 7e-14
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 8   EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
            +L + P  GAF+VR+    P  +A+S R   +     I H  + +  +   +     EF
Sbjct: 136 HMLMRVPRDGAFLVRKRNE-PNSYAISFRAEGK-----IKHCRVQQEGQTVMLGN--SEF 187

Query: 67  SSLTSLITHHSVMPELLPCTL 87
            SL  LI+++   P      L
Sbjct: 188 DSLVDLISYYEKHPLYRKMKL 208

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 52.2 bits (125), Expect = 9e-10
 Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF---TKEFSSLT 70
           P G+F+VRES T  G + LS     +       H  I         K F      F SL 
Sbjct: 35  PDGSFLVRESETFVGDYTLSFWRNGKVQ-----HCRIHSRQDAGTPKFFLTDNLVFDSLY 89

Query: 71  SLITHHSVMPELLPCTLSLHRYNP 94
            LITH+  +P              
Sbjct: 90  DLITHYQQVPLRCNEFEMRLSEPV 113

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 60.8 bits (148), Expect = 1e-13
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           E+L ++  G F+VRES  KPG + LS+            H++I      Y+ +G    FS
Sbjct: 31  ELLKKQ--GDFLVRESHGKPGEYVLSVY-----SDGQRRHFIIQYVDNMYRFEG--TGFS 81

Query: 68  SLTSLITHHSVMPELLPCTLSLHRYNP 94
           ++  LI HH    +++     +   NP
Sbjct: 82  NIPQLIDHHYTTKQVITKKSGVVLLNP 108

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 60.4 bits (147), Expect = 1e-13
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 7   LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           +        G F+VR+S T+ G   L+             H  +   A G         F
Sbjct: 25  VLEGGTGSHGVFLVRQSETRRGECVLTFN-----FQGKAKHLRLSLNAAGQCRVQHLH-F 78

Query: 67  SSLTSLITHHSVMPELLPCTLSLH 90
            S+  ++ H  V P  L    S  
Sbjct: 79  QSIFDMLEHFRVHPIPLESGGSSD 102

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 63.7 bits (155), Expect = 1e-13
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 7   LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG--YKIKGFTK 64
           L + ++ P G F+VRES T  G + LS+        L + HY I +   G  Y       
Sbjct: 163 LLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQ- 221

Query: 65  EFSSLTSLITHHSVMPELLPCTLS 88
            F+SL  L+ ++S   + L   L+
Sbjct: 222 -FNSLQQLVAYYSKHADGLCHRLT 244

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 60.4 bits (147), Expect = 2e-13
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 8   EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           ++L + P  GAF++R+       +A++ R   +     + H  I R  + + + G +  F
Sbjct: 33  DMLMRIPRDGAFLIRKREG-TDSYAITFRARGK-----VKHCRINRDGRHFVL-GTSAYF 85

Query: 67  SSLTSLITHHSVMPELLPCTL 87
            SL  L++++          L
Sbjct: 86  ESLVELVSYYEKHALYRKMRL 106

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLIL-RTAKGYKIKGFTKEF 66
            +LS EP G F++R+S+ +   F LS++      +L I             +       F
Sbjct: 37  LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRF 96

Query: 67  SSLTSLITHHSVMPELLPCTLSL 89
             +  L+ H+   P     +L  
Sbjct: 97  DCVLKLVHHYMPPPGTPSFSLPP 119

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 58.9 bits (143), Expect = 5e-13
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 10  LSQEPVGAFMVRESTTKPGCFALSLRVP-KEFHHLGIAHYLILRTAKG---YKIKGFTKE 65
           L     GAFMVR+S T PG + +S+        +  I HY I  T      Y +      
Sbjct: 26  LDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYV- 83

Query: 66  FSSLTSLITHHSVMPELLPCTL 87
           F S+  LI +H      L   L
Sbjct: 84  FDSIPLLIQYHQYNGGGLVTRL 105

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 62.1 bits (151), Expect = 5e-13
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 10  LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
           LS    G+F+VRES + PG  ++SLR     +   + HY I   + G         F++L
Sbjct: 121 LSSGINGSFLVRESESSPGQRSISLR-----YEGRVYHYRINTASDGKLYVSSESRFNTL 175

Query: 70  TSLITHHSVMPELLPCTLS 88
             L+ HHS + + L  TL 
Sbjct: 176 AELVHHHSTVADGLITTLH 194

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 58.7 bits (142), Expect = 9e-13
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI--KGFTKE 65
             L+  P G+F+VR+S+      +LS R   +       H  I  +   +    +   + 
Sbjct: 38  GKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTL-----HTRIEHSNGRFSFYEQPDVEG 92

Query: 66  FSSLTSLITHHSVMPELLPCTLSLHRYNPN 95
            +S+  LI H     E      S  R   +
Sbjct: 93  HTSIVDLIEHSIGDSENGAFCYSRSRLPGS 122

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 24/82 (29%), Positives = 39/82 (47%)

Query: 7   LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           L + ++ P G F+VRES T  G + LS+        L + HY I +   G        +F
Sbjct: 80  LLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQF 139

Query: 67  SSLTSLITHHSVMPELLPCTLS 88
           +SL  L+ ++S   + L   L+
Sbjct: 140 NSLQQLVAYYSKHADGLCHRLT 161

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 57.2 bits (138), Expect = 2e-12
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 22/96 (22%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT---- 63
            +L  +  G F+VR+S+T PG + LS+       +  ++HY+I  +     +        
Sbjct: 14  ALLQGQRHGVFLVRDSSTSPGDYVLSVS-----ENSRVSHYIINSSGPRPPVPPSPAQPP 68

Query: 64  ------------KEFSSLTSLITHHSVMPELLPCTL 87
                       +EF SL +L+  + +   L   TL
Sbjct: 69  PGVSPSRLRIGDQEFDSLPALLEFYKIHY-LDTTTL 103

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 57.6 bits (139), Expect = 3e-12
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE---FSSLT 70
             G F+VRES T P  + LS           + H  I  T +   +K +  +   F+S+ 
Sbjct: 49  KDGTFLVRESETFPNDYTLSFW-----RSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIY 103

Query: 71  SLITHHSVMPEL---LPCTLSLHRYNPN 95
           +LI H+             L+    NPN
Sbjct: 104 ALIQHYREAHLRCAEFELRLTDPVPNPN 131

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 22/73 (30%), Positives = 33/73 (45%)

Query: 16  GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
           G+FM+R+S T  G ++LS+R         + HY I     G         FS+L  L+ H
Sbjct: 94  GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 153

Query: 76  HSVMPELLPCTLS 88
           +    + L   LS
Sbjct: 154 YKKGNDGLCQKLS 166

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 56.5 bits (137), Expect = 3e-12
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRESTT PG + L+     +       H L++      + K     F S++ LI++
Sbjct: 27 GDFLVRESTTTPGQYVLTGLQSGQPK-----HLLLVDPEGVVRTKD--HRFESVSHLISY 79

Query: 76 HSVMPELLPCTLS 88
          H      +    S
Sbjct: 80 HMDNHLPIISAGS 92

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 56.7 bits (137), Expect = 4e-12
 Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 8  EVLSQEP-VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE- 65
          E+L + P +G  ++R  +     +++++R  +E     I HY ++   + Y I+      
Sbjct: 29 EMLQKNPSLGNMILRPGSD-SRNYSITIR--QEIDIPRIKHYKVMSVGQNYTIELEKPVT 85

Query: 66 FSSLTSLITHHS 77
            +L S+I +  
Sbjct: 86 LPNLFSVIDYFV 97

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.8 bits (142), Expect = 7e-12
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLIT 74
          G F++R+     G + LSL      H +   H+ I R   G Y I G  K       L  
Sbjct: 32 GLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAG-GKAHCGPAELCE 85

Query: 75 HHSVMPELLPCTL 87
           +S  P+ LPC L
Sbjct: 86 FYSRDPDGLPCNL 98

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 47.2 bits (112), Expect = 9e-08
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 16  GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
           G F++R      G +ALSL      +   + HYLI +   G        +F +L  L+ +
Sbjct: 185 GKFLLRPRKE-QGTYALSLI-----YGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEY 238

Query: 76  HSVMPELLPCTLSLHRYNPNFE 97
             +  + L   L     N +  
Sbjct: 239 LKLKADGLIYCLKEACPNSSAS 260

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 57.4 bits (138), Expect = 7e-12
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
             G+F++RES +  G F+LS+R   +     + HY I     G + I      F  L  L
Sbjct: 96  THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRIT-FPGLHEL 154

Query: 73  ITHHSVMPELLPCTL 87
           + H++   + L   L
Sbjct: 155 VRHYTNASDGLCTRL 169

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 57.2 bits (138), Expect = 9e-12
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 8/73 (10%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKG---FTK 64
            +L  +P G F++R+S  +   F++S R           H  I +    +          
Sbjct: 48  ALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSL-----HARIEQWNHNFSFDAHDPCVF 102

Query: 65  EFSSLTSLITHHS 77
               +T L+ H+ 
Sbjct: 103 HSPDITGLLEHYK 115

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 58.1 bits (141), Expect = 9e-12
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
            +L     G F+VREST  PG + L +          + HY I+  A    I      F 
Sbjct: 94  RLLYPPETGLFLVRESTNYPGDYTLCVS-----CEGKVEHYRIMYHASKLSI-DEEVYFE 147

Query: 68  SLTSLITHHSVMPELLPCTL 87
           +L  L+ H++   + L   L
Sbjct: 148 NLMQLVEHYTTDADGLCTRL 167

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 55.0 bits (133), Expect = 2e-11
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E L     G F+VR+++TK  G + L+LR              I      Y        F
Sbjct: 25 EKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNK-----LIKIFHRDGKYGFSD-PLTF 78

Query: 67 SSLTSLITHHS 77
          SS+  LI H+ 
Sbjct: 79 SSVVELINHYR 89

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 55.6 bits (134), Expect = 3e-11
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI------KG 61
           E L + P G F++R+S+       +S++        G  +  I      +++      K 
Sbjct: 31  EKLKEAPEGTFLIRDSSHSDYLLTISVK-----TSAGPTNLRIEYQDGKFRLDSIICVKS 85

Query: 62  FTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
             K+F S+  LI ++ V       T      N    
Sbjct: 86  KLKQFDSVVHLIDYY-VQMCKDKRTGPEAPRNGTVH 120

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 54.1 bits (129), Expect = 3e-10
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E L     G F+VR+++TK  G + L+LR              I      Y        F
Sbjct: 24 EKLRDTADGTFLVRDASTKMHGDYTLTLR-----KGGNNKLIKIFHRDGKYGFSD-PLTF 77

Query: 67 SSLTSLITHHS 77
          SS+  LI H+ 
Sbjct: 78 SSVVELINHYR 88

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 51.4 bits (122), Expect = 3e-09
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
            +L  +  G F+VRES+   GC+A S+ V  E     + H +I +TA GY        +S
Sbjct: 315 NLLRGKRDGTFLVRESSK-QGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYS 368

Query: 68  SLTSL 72
           SL  L
Sbjct: 369 SLKEL 373

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
          E+L     G F+VRES      + LS+            H++I      Y+++G    F 
Sbjct: 27 ELLVHS--GDFLVRESQG-KQEYVLSVL-----WDGLPRHFIIQSLDNLYRLEGEG--FP 76

Query: 68 SLTSLITHHSVMPELLPCTL 87
          S+  LI H     + L    
Sbjct: 77 SIPLLIDHLLSTQQPLTKKS 96

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 49.3 bits (118), Expect = 2e-09
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           E+L     G F+VRES  K   + LS+            H++I      Y+++G  + F 
Sbjct: 30  ELLVHS--GDFLVRESQGKQE-YVLSVL-----WDGLPRHFIIQSLDNLYRLEG--EGFP 79

Query: 68  SLTSLITHHSVMPELLPCTLSLHRYNP 94
           S+  LI H     + L     +  +  
Sbjct: 80  SIPLLIDHLLSTQQPLTKKSGVVLHRA 106

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 49.6 bits (118), Expect = 4e-09
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA---HYLILRTAKGYKIKGFTK 64
            +LS EP G F++R+S+ +   F LS++      +L I        L++    +      
Sbjct: 48  LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQS--DPRSTQPVP 105

Query: 65  EFSSLTSLITHHS 77
            F  +  L+ H+ 
Sbjct: 106 RFDXVLKLVHHYM 118

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 50.8 bits (120), Expect = 5e-09
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
             L  +  G F+VR+S+T PG + LS+       +  ++HY+I             +EF 
Sbjct: 26  TRLQGQRHGMFLVRDSSTCPGDYVLSVS-----ENSRVSHYIINSLPNRRFK-IGDQEFD 79

Query: 68  SLTSLITHHSVMPELLPCTLSLHRYNPNF 96
            L +L+  + +        +      P+ 
Sbjct: 80  HLPALLEFYKIHYLDTTTLIEPAPRYPSP 108

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 50.1 bits (119), Expect = 6e-09
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 8   EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           E+LS++   GAF++RES + PG F+LS+          + H+ +LR   G       K F
Sbjct: 72  EMLSKQRHDGAFLIRESESAPGDFSLSV-----KFGNDVQHFKVLRDGAGKYFLWVVK-F 125

Query: 67  SSLTSLITHHSVMPELLPCTLSLH 90
           +SL  L+ +H          + L 
Sbjct: 126 NSLNELVDYHRSTSVSRNQQIFLR 149

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 48.3 bits (115), Expect = 9e-09
 Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 8/84 (9%)

Query: 10  LSQEPVGAFMVRESTTKPG--CFALSLRVPKEFHHLGIAHYLILRTAKGYKI---KGFTK 64
                 G+F++R+S+       + L     K  +++       +   K Y +   K   +
Sbjct: 40  HRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNI---PVRFIEATKQYALGKKKNGEE 96

Query: 65  EFSSLTSLITHHSVMPELLPCTLS 88
            F S+  ++  H   P +L  + +
Sbjct: 97  YFGSVVEIVNSHQHNPLVLIDSQN 120

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L  +  G F+VR+S+T PG + LS+       +  ++HY+I  +     +     +  
Sbjct: 27 ALLQGQRHGVFLVRDSSTSPGDYVLSVS-----ENSRVSHYIINSSGPRPPVPPSPAQPP 81

Query: 68 S 68
           
Sbjct: 82 P 82

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 43.2 bits (101), Expect = 7e-07
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 8   EVLSQEP-VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI---KGFT 63
            +L + P  G  ++R S       +++ R      H+ + HY + R    Y I   + F+
Sbjct: 35  LLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHV-VRHYKVKREGPKYVIDVEQPFS 93

Query: 64  KEFSSLTSLITH 75
              +SL +++ +
Sbjct: 94  --CTSLDAVVNY 103

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G+F+ R S    G F+LS+RV  +     + H  I  +   Y + G  K F++LT L+ +
Sbjct: 25 GSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQNSGDFYDLYGGEK-FATLTELVEY 78

Query: 76 HSVMPELL 83
          ++    +L
Sbjct: 79 YTQQQGVL 86

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G+F+ R S    G F+LS+RV  +     + H  I  +   Y + G  K F++LT L+ +
Sbjct: 25 GSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQNSGDFYDLYGGEK-FATLTELVEY 78

Query: 76 HSVMPELL 83
          ++    +L
Sbjct: 79 YTQQQGVL 86

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 13  EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY------KIKGFTKEF 66
             +G F++R+S+  PG ++L++R   E +   + HYLI R            +K   + F
Sbjct: 62  VSIGTFLMRDSSR-PGEYSLTVREADEGNA--VCHYLIERGEPKEDGTAAAGVKIANQSF 118

Query: 67  SSLTSLITHHSVMPELLPCTLSLHRYNPN 95
             + +L+ H  +        L+ ++    
Sbjct: 119 PDIPALLNHFKMRVLTEASLLAAYKKPII 147

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 41.8 bits (98), Expect = 7e-06
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
          L++   G+F+ R S + PG   LS+R         + H  I  T   Y + G  K F++L
Sbjct: 21 LTRGVDGSFLARPSKSNPGDLTLSVRRNGA-----VTHIKIQNTGDYYDLYGGEK-FATL 74

Query: 70 TSLITHHSVMPELL 83
            L+ ++      L
Sbjct: 75 AELVQYYMEHHGQL 88

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 Length = 525

 Score = 36.0 bits (83), Expect = 8e-04
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 16  GAFMVRESTTKPGCFALSLR-----VPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLT 70
           G+F+VRES + PG F LS+R              + H +I      Y + G  + F SLT
Sbjct: 133 GSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDV-GGGERFDSLT 191

Query: 71  SLITHHSVMP 80
            L+ H+   P
Sbjct: 192 DLVEHYKKNP 201

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 41.1 bits (95), Expect = 1e-05
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 11/101 (10%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAH--------YLILRTAKGYKI 59
            +L  +  G F+VR+S+T PG + LS+       H  I              +   G   
Sbjct: 25  ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSP 84

Query: 60  KGFT---KEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
                  +EF SL +L+  + +        +     +    
Sbjct: 85  SRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGS 125

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 13  EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF------TKEF 66
             +G F++R+S+  PG ++L++R  +      + HYLI R                 + F
Sbjct: 33  VSIGTFLMRDSSR-PGEYSLTVR--EADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSF 89

Query: 67  SSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
             + +L+ H  +        L+ ++     
Sbjct: 90  PDIPALLNHFKMRVLTEASLLAAYKKPIIE 119

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A* Length = 473

 Score = 36.9 bits (84), Expect = 4e-04
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           + L  +  G F++R S   PG F ++    +      I HYL+         K F    S
Sbjct: 365 DALQNQDPGTFIIRFSERNPGQFGIAYIGVEM--PARIKHYLVQPNDTAAAKKTFPDFLS 422

Query: 68  SLTSL--ITHHSVMPELLPCTLSLHR 91
             +    +   +      P  L LH+
Sbjct: 423 EHSQFVNLLQWTKDTNGAPRFLKLHK 448

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.96
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.96
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.96
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.96
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.95
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.95
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.95
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.95
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.95
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.95
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.95
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.95
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.95
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.95
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.95
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.95
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.95
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.95
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.94
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.94
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.94
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.94
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.94
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.94
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.94
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.94
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.94
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.94
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.94
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.93
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.93
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.93
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.93
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.93
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.93
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.93
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.92
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.92
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.92
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.92
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.92
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.91
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.91
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.91
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.91
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.91
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.91
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.91
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.91
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.91
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.9
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.9
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.9
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.9
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.89
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.89
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.87
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.86
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.86
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.86
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.86
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.86
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.75
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.84
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.82
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.82
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.82
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.81
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.8
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.79
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.78
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.76
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.76
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.75
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.74
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.73
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.69
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.67
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.61
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.58
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.51
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	99.07
1uur_A	473	Stata protein, STAT protein; transcription activat	98.72
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	98.5
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	98.35
1yvl_A	683	Signal transducer and activator of transcription 1	98.29
1bf5_A	575	Signal transducer and activator of transcription 1	98.17
1y1u_A	585	Signal transducer and activator of transcription;	98.17
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	98.09
3op0_A	323	Signal transduction protein CBL-C; structural geno	97.96
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	97.82
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	97.66
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	95.24
2ee9_A	95	Filamin-B; beta-sandwich, immunoglobulin-like fold	91.86
2di8_A	111	Filamin-B; beta-sandwich, immunoglobulin-like fold	91.68
2k9u_A	119	Gamma filamin; cytoskeletal complex, alternative s	90.79
2d7n_A	93	Filamin-C; beta-sandwich, immunoglobulin-like fold	90.7
3rgh_A	100	Filamin-A; cell adhesion, cytoskeleton-complex, di	90.69
2eea_A	115	Filamin-B; beta-sandwich, immunoglobulin-like fold	90.61
2bp3_A	97	Filamin A; structural protein, cytoskeleton/comple	90.08
2ds4_A	113	Tripartite motif protein 45; beta-sandwich, immuno	89.99
2d7o_A	111	Filamin-C; beta-sandwich, immunoglobulin-like fold	89.78
2w0p_A	94	Filamin-A; alternative splicing, cytoskeleton/comp	89.71
2dj4_A	108	Filamin-B; beta-sandwich, immunoglobulin-like fold	88.9
2dia_A	113	Filamin-B; beta-sandwich, immunoglobulin-like fold	88.64
2e9j_A	119	Filamin-B; beta-sandwich, immunoglobulin-like fold	88.47
2dmb_A	124	Filamin-B; beta-sandwich, immunoglobulin-like fold	88.46
1v05_A	96	Filamin C; actin-binding protein, immunoglobulin;	88.2
2di9_A	131	Filamin-B; beta-sandwich, immunoglobulin-like fold	87.47
2d7p_A	112	Filamin-C; beta-sandwich, immunoglobulin-like fold	87.24
2dic_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	87.09
2dlg_A	102	Filamin-B; beta-sandwich, immunoglobulin-like fold	87.01
2ee6_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	86.66
3cnk_A	89	Filamin-A; FLNA24, X-RAY crystalography, homodimer	86.57
2d7m_A	115	Filamin-C; beta-sandwich, immunoglobulin-like fold	86.36
2dib_A	128	Filamin-B; beta-sandwich, immunoglobulin-like fold	81.51
2di7_A	124	BK158_1; beta-sandwich, immunoglobulin-like fold,	80.95

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.96  E-value=3.5e-29  Score=141.56  Aligned_cols=87  Identities=22%  Similarity=0.324  Sum_probs=80.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.++
T Consensus        12 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~Lv~~y~~~~   85 (98)
T 3us4_A           12 ISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFG-----RDVIHYRVLHRDGHLTIDE-AVFFCNLMDMVEHYSKDK   85 (98)
T ss_dssp             CCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEEETTEEESSS-SSEESSHHHHHHHHHHCC
T ss_pred             CCHHHHHHHccCCCCcEEEEEeCCCCCCcEEEEEEEC-----CceEEEEEEEeCCEEEECC-CCccCCHHHHHHHhhhCC
Confidence            7899999999887999999999999999999999995     8999999998777788876 778999999999999999


Q ss_pred             CCcceeecCCCCC
Q psy3300          81 ELLPCTLSLHRYN   93 (97)
Q Consensus        81 ~~l~~~L~~p~~~   93 (97)
                      ++++|+|..|+++
T Consensus        86 ~~l~~~L~~P~pk   98 (98)
T 3us4_A           86 GAICTKLVRPKRK   98 (98)
T ss_dssp             TTSSSCCCSBCCC
T ss_pred             CCCeEcCCccCCC
Confidence            9999999999864

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.96  E-value=9.9e-29  Score=140.21  Aligned_cols=88  Identities=24%  Similarity=0.329  Sum_probs=80.6

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|++  .++|+||||+|++.+|.|+||++..     +.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus         9 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   82 (100)
T 1rja_A            9 ISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT-----QAVRHYKIWRRAGGRLHLNE-AVSFLSLPELVNYHR   82 (100)
T ss_dssp             CCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTT-----SSCEEEEEEECSSSCEEEET-TEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEEEcCCCcEEECC-CCccCCHHHHHHHHh
Confidence            799999999998  5899999999999899999999984     89999999986555 88876 778999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.++|+.|+..|
T Consensus        83 ~~~~~l~~~L~~p~~~~   99 (100)
T 1rja_A           83 AQSLSHGLRLAAPCRKH   99 (100)
T ss_dssp             HCCTTSSSCCCSBCCCC
T ss_pred             hCCCCCCCCCCccCCCC
Confidence            99999999999999876

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.96  E-value=2.8e-28  Score=139.33  Aligned_cols=92  Identities=25%  Similarity=0.322  Sum_probs=79.4

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++...+..++.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        11 isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LI~~y~   89 (105)
T 1lkk_A           11 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISP-RITFPGLHELVRHYT   89 (105)
T ss_dssp             CCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESST-TSCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECC-CceeCCHHHHHHHHh
Confidence            799999999985  48999999999999999999999842212378999999987554 88865 688999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .++++++|+|+.|+++
T Consensus        90 ~~~~~l~~~L~~P~~~  105 (105)
T 1lkk_A           90 NASDGLCTRLSRPCQT  105 (105)
T ss_dssp             HCCTTSSSCCCSBCCC
T ss_pred             hCCCCCccCCcCcCCC
Confidence            9999999999999864

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.96  E-value=2.8e-28  Score=139.60  Aligned_cols=88  Identities=26%  Similarity=0.335  Sum_probs=80.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.++
T Consensus        15 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~g~~~l~~-~~~F~sl~~Lv~~y~~~~   88 (106)
T 3eaz_A           15 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSD-----GKVEHYRIMYHASKLSIDE-EVYFENLMQLVEHYTSDA   88 (106)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECTTSTTCEEEEEEET-----TEEEEEECEEETTEEESSS-SSCBSSHHHHHHHHHHCC
T ss_pred             CCHHHHHHHhCCCCCCEEEEEECCCCCCcEEEEEEeC-----CceEEEEEEecCCEEEECC-CCccCCHHHHHHHHhhCC
Confidence            7899999999888999999999999999999999995     8999999997766688865 778999999999999999


Q ss_pred             CCcceeecCCCCCC
Q psy3300          81 ELLPCTLSLHRYNP   94 (97)
Q Consensus        81 ~~l~~~L~~p~~~p   94 (97)
                      ++++|+|+.|+...
T Consensus        89 ~gl~~~L~~P~~~~  102 (106)
T 3eaz_A           89 DGLCTRLIKPKVME  102 (106)
T ss_dssp             TTSSSCCCEECCCC
T ss_pred             CCCCeecCCcCCCC
Confidence            99999999998653

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.95  E-value=3.2e-28  Score=144.05  Aligned_cols=93  Identities=32%  Similarity=0.590  Sum_probs=80.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCC------C----CCceeEEEEEEeCCcEEEec--ccCCCCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEF------H----HLGIAHYLILRTAKGYKIKG--FTKEFSS   68 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~------~----~~~v~h~~I~~~~~~~~l~~--~~~~F~s   68 (97)
                      |+|++||++|++.++|+||||+|++.+|.|+|||+.....      .    ++.|+||+|...++||++.|  ....|+|
T Consensus        27 isR~eAe~lL~~~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g~~l~g~~~~~~F~S  106 (131)
T 2kno_A           27 LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPSEPYFGS  106 (131)
T ss_dssp             CCHHHHHHHHTTSCTTBEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSCCCEETCSSCCCCCS
T ss_pred             CCHHHHHHHhcCCCCCeEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCCCEEecCCCCCccCC
Confidence            7999999999888999999999999999999999985210      0    14899999998888888854  3667999


Q ss_pred             HHHHHHHhhhCCCCcceeecCCCCC
Q psy3300          69 LTSLITHHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        69 l~~Lv~~y~~~~~~l~~~L~~p~~~   93 (97)
                      |.+||+||+.++++|+|+|+.|+.+
T Consensus       107 L~eLV~~y~~~~~~L~~~L~~P~~~  131 (131)
T 2kno_A          107 LSALVSQHSISPISLPCCLRIPSKD  131 (131)
T ss_dssp             HHHHHHTTTTCCSSCSSCCBCSSCC
T ss_pred             HHHHHHHHhhCCCCCCeECCCcCCC
Confidence            9999999999999999999999864

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.95  E-value=4.5e-28  Score=139.96  Aligned_cols=87  Identities=30%  Similarity=0.426  Sum_probs=79.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+.+
T Consensus        12 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~~~~-~~~F~sl~~LV~~y~~~   85 (112)
T 3k2m_A           12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYE-----GRVYHYRINTASDGKLYVSS-ESRFNTLAELVHHHSTV   85 (112)
T ss_dssp             CCHHHHHHHTTTCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEESST-TCCBSSHHHHHHHHHHC
T ss_pred             CCHHHHHHHhccCCCceEEEEeCCCCCCCEEEEEEeC-----CcEEEEEEEECCCCcEEECC-CCeECCHHHHHHHHhhC
Confidence            7899999999888999999999999999999999995     89999999987666 66655 77999999999999999


Q ss_pred             CCCcceeecCCCCC
Q psy3300          80 PELLPCTLSLHRYN   93 (97)
Q Consensus        80 ~~~l~~~L~~p~~~   93 (97)
                      ++++.++|+.|+..
T Consensus        86 ~~~l~~~L~~P~~~   99 (112)
T 3k2m_A           86 ADGLITTLHYPAPK   99 (112)
T ss_dssp             CTTSSSCCCEECCC
T ss_pred             CCCCccCCCCCCCC
Confidence            99999999999865

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.95  E-value=3e-28  Score=141.07  Aligned_cols=93  Identities=27%  Similarity=0.340  Sum_probs=81.3

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|++  .++|+||||+|++.+|.|+||++..... ++.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        19 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~-~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   96 (114)
T 1blj_A           19 ISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQ-GEVVKHYKIRSLDNGGYYISP-RITFPTLQALVQHYS   96 (114)
T ss_dssp             CCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTT-TCBCCCEEEEEETTTEEEEET-TEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCC-CCcEEEEEEEEcCCCCEEECC-CcccCCHHHHHHHhh
Confidence            799999999985  4899999999999999999999983211 278999999987555 88875 778999999999999


Q ss_pred             hCCCCcceeecCCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p~   95 (97)
                      .+++++.|+|+.|+..|+
T Consensus        97 ~~~~~l~~~L~~p~~~~~  114 (114)
T 1blj_A           97 KKGDGLCQKLTLPCVNLA  114 (114)
T ss_dssp             HCCSSSSSCCCCCSCCCC
T ss_pred             hCCCCCceecCccCCCCC
Confidence            999999999999998874

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.95  E-value=6.2e-28  Score=137.76  Aligned_cols=88  Identities=18%  Similarity=0.281  Sum_probs=78.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEec----ccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKG----FTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~----~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++. ++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+    ....|+||.+||+
T Consensus        11 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~   85 (104)
T 1d4t_A           11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH-----GYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLIS   85 (104)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEEC-----CeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHH
Confidence            7999999999754 899999999999999999999995     89999999987666 77764    2568999999999


Q ss_pred             HhhhCCCCcceeecCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~   93 (97)
                      ||+.+++++.++|+.|+.+
T Consensus        86 ~y~~~~~~l~~~L~~P~~r  104 (104)
T 1d4t_A           86 AFQKPDQGIVIPLQYPVEK  104 (104)
T ss_dssp             HHTSSSSSSSSCCCEECCC
T ss_pred             HHhhCCCCCeEECCCcCCC
Confidence            9999999999999999753

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.95  E-value=7.7e-28  Score=140.87  Aligned_cols=89  Identities=21%  Similarity=0.298  Sum_probs=81.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC-
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM-   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~-   79 (97)
                      |+|++||++|...++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.+ 
T Consensus        29 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~l~~-~~~F~sl~eLV~~y~~~~  102 (122)
T 2lnw_A           29 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFN-----DEVKHIKVVEKDNWIHITE-AKKFDSLLELVEYYQCHS  102 (122)
T ss_dssp             CCHHHHHHHHHHSCTTBEEEEECCCSSEEEEEEEECS-----SCEEEEEEEEETTEEESSS-SCCBSSHHHHHHHHHHSC
T ss_pred             CCHHHHHHHhcCCCCCeEEEEeCCCCCCcEEEEEEeC-----CcEEEEEEEEcCCEEEECC-CCeECCHHHHHHHHhhCc
Confidence            7999999999877899999999999999999999995     8999999998877788865 78999999999999999 


Q ss_pred             ----CCCcceeecCCCCCCC
Q psy3300          80 ----PELLPCTLSLHRYNPN   95 (97)
Q Consensus        80 ----~~~l~~~L~~p~~~p~   95 (97)
                          .+++.++|+.|+.+|.
T Consensus       103 l~~~~~~l~~~L~~P~~~pE  122 (122)
T 2lnw_A          103 LKESFKQLDTTLKYPYKSRE  122 (122)
T ss_dssp             GGGTCTTCCCCCCBCSSSCC
T ss_pred             CcccCCCcCeeeCCcCCCCC
Confidence                6789999999998873

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.95  E-value=1e-27  Score=139.66  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=80.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|++.++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.++
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~g~~~l~~-~~~F~sl~~LV~~y~~~~   96 (118)
T 2dlz_A           23 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFN-----DEVKHIKVVEKDNWIHITE-AKKFDSLLELVEYYQCHS   96 (118)
T ss_dssp             CCHHHHHHHHHHSCTTBEEEECCSCSSCCEEEEEECS-----SSEEEEEEEEETTEEESTT-SCCBSSHHHHHHHHTTSC
T ss_pred             CCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEEC-----CcEEEEEEEEcCCEEEEeC-CcccCCHHHHHHHHhhCc
Confidence            7899999999888999999999998899999999984     8999999998766688876 688999999999999988


Q ss_pred             C-----CcceeecCCCCCCC
Q psy3300          81 E-----LLPCTLSLHRYNPN   95 (97)
Q Consensus        81 ~-----~l~~~L~~p~~~p~   95 (97)
                      +     ++.++|+.|+..|.
T Consensus        97 l~~~~~gl~~~L~~Pv~~p~  116 (118)
T 2dlz_A           97 LKESFKQLDTTLKYPYSGPS  116 (118)
T ss_dssp             TTTTCTTCCCCCCBCCSCCC
T ss_pred             ccccCCCcccEeCCcCCCCC
Confidence            6     78899999988774

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.95  E-value=2.7e-27  Score=138.41  Aligned_cols=88  Identities=25%  Similarity=0.315  Sum_probs=78.9

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...  ++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus        23 isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~eLV~~y~   96 (121)
T 2dly_A           23 IKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDE-----GVVKHYRIRRLDEGGFFLTR-RKVFSTLNEFVNYYT   96 (121)
T ss_dssp             CCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESS-----SCEEEEEEEECSSSCEEEET-TEEESSHHHHHHHHT
T ss_pred             CCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEEC-----CeEEEEEEEEcCCCCEEECC-CCccCCHHHHHHHHh
Confidence            7999999999864  899999999999999999999995     89999999986555 88876 778999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.++|+.|+..+
T Consensus        97 ~~~~~l~~~L~~P~~~~  113 (121)
T 2dly_A           97 TTSDGLCVKLEKPCLKI  113 (121)
T ss_dssp             TCCSSSSSCCCSBCCCC
T ss_pred             hCCCCCceeCCeecCCC
Confidence            99999999999997653

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.95  E-value=6.5e-28  Score=140.66  Aligned_cols=88  Identities=33%  Similarity=0.435  Sum_probs=79.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+.+
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~~~   96 (119)
T 2ecd_A           23 VSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYE-----GRVYHYRINTTADGKVYVTA-ESRFSTLAELVHHHSTV   96 (119)
T ss_dssp             CCHHHHHHHHHTSCTTBEEEEEESSSTTEEEEEEECS-----SCEEEECCCCCSSSCCCCCS-SCCCSSHHHHHHHHHHC
T ss_pred             CCHHHHHHHhcCCCCCeEEEEeCCCCCCCEEEEEEEC-----CeEEEEEEEEcCCCCEEEcC-CCcCCCHHHHHHHHhhC
Confidence            7899999999888999999999999999999999995     89999999986666 77765 77899999999999999


Q ss_pred             CCCcceeecCCCCCC
Q psy3300          80 PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~~l~~~L~~p~~~p   94 (97)
                      ++++.++|+.|+..+
T Consensus        97 ~~gl~~~L~~P~~~~  111 (119)
T 2ecd_A           97 ADGLVTTLHYPAPKC  111 (119)
T ss_dssp             CTTSSSCCCBCCSSC
T ss_pred             CCCCceECCCccCCC
Confidence            999999999997653

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.95  E-value=1.4e-27  Score=136.09  Aligned_cols=87  Identities=23%  Similarity=0.334  Sum_probs=77.6

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEec----ccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKG----FTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~----~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|.+ .++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+    ....|+||.+||+
T Consensus        10 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~   84 (103)
T 1i3z_A           10 LTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFK-----KLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVS   84 (103)
T ss_dssp             CCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECS-----SSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHH
T ss_pred             CCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHH
Confidence            799999999986 4899999999999999999999984     89999999987666 77864    2567999999999


Q ss_pred             HhhhCCCCcceeecCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~   92 (97)
                      ||+.+++++.++|+.|+.
T Consensus        85 ~y~~~~~~l~~~L~~P~~  102 (103)
T 1i3z_A           85 KYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HTTSSSSSSSSCCCEECC
T ss_pred             HHhhCCCCCeEEcCCccC
Confidence            999999999999999975

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.95  E-value=5.1e-28  Score=138.47  Aligned_cols=92  Identities=27%  Similarity=0.407  Sum_probs=79.5

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+.  .++|+||||+|++.+|.|+||++...+..++.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   90 (106)
T 1aot_F           12 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITT-RAQFETLQQLVQHYS   90 (106)
T ss_dssp             CCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEET-TEEESSHHHHHHHHT
T ss_pred             CCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECC-CCccCCHHHHHHHhc
Confidence            799999999975  37999999999999999999999632222479999999987655 88876 778999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .++++++|+|+.|+++
T Consensus        91 ~~~~~l~~~L~~p~~~  106 (106)
T 1aot_F           91 ERAAGLSSRLVVPSHK  106 (106)
T ss_dssp             TCCTTSSSCSCSSCCC
T ss_pred             cCCCCCcEeecccCCC
Confidence            9999999999999863

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.95  E-value=2.7e-27  Score=138.04  Aligned_cols=89  Identities=21%  Similarity=0.237  Sum_probs=79.2

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecc----cCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGF----TKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~----~~~F~sl~~Lv~   74 (97)
                      |+|++||++|+. .++|+||||+|++.+|.|+|||+..     +.++||+|....+| |.+.+.    ...|+||.+||+
T Consensus        17 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV~   91 (119)
T 2ysx_A           17 ITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYR-----NCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIE   91 (119)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEECS-----SCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHHH
Confidence            799999999986 6899999999999999999999985     89999999986655 888752    357999999999


Q ss_pred             HhhhCCCCcceeecCCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~p   94 (97)
                      ||+.+++++.++|+.|+..+
T Consensus        92 ~y~~~~~~l~~~L~~P~~~~  111 (119)
T 2ysx_A           92 FYKKENMGLVTHLQYPVPLE  111 (119)
T ss_dssp             HTTSSSSSSSSCCCEECCCC
T ss_pred             HHhhCCCCCCeECCCcCCCC
Confidence            99999999999999998664

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.95  E-value=2.1e-27  Score=140.03  Aligned_cols=91  Identities=18%  Similarity=0.263  Sum_probs=80.2

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEec----ccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKG----FTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~----~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++. ++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+    ....|+||.+||+
T Consensus        11 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~   85 (128)
T 1ka6_A           11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH-----GYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLIS   85 (128)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESS-----SCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEeC-----CEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHHH
Confidence            7999999999753 899999999998999999999984     89999999987666 77764    2567999999999


Q ss_pred             HhhhCCCCcceeecCCCCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYNPNF   96 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~p~~   96 (97)
                      ||+.+++++.++|+.|+..+..
T Consensus        86 ~y~~~~~gl~~~L~~P~~~~~~  107 (128)
T 1ka6_A           86 AFQKPDQGIVIPLQYPVEKKSS  107 (128)
T ss_dssp             HTTSSCSSSSSCCCSBCCSSCC
T ss_pred             HHhhCCCCCcEEcCCcCCCCCC
Confidence            9999999999999999877653

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.95  E-value=2e-27  Score=135.85  Aligned_cols=88  Identities=26%  Similarity=0.484  Sum_probs=75.2

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeC-Cc---EEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTA-KG---YKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~-~~---~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++.  ++|+||||+|++.+|.|+||++..     +.++||+|...+ +|   |.+.+....|+||.+||+
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~   86 (105)
T 1nrv_A           12 ISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHH-----QKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVD   86 (105)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEET-----TEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEeC-----CEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHHH
Confidence            7999999999864  799999999999999999999995     899999999853 44   445433578999999999


Q ss_pred             HhhhCCCCcceeecCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~   93 (97)
                      ||+.++++++|+|+.|++.
T Consensus        87 ~y~~~~~~l~~~L~~p~~r  105 (105)
T 1nrv_A           87 FYQLNKGVLPCKLKHHCIR  105 (105)
T ss_dssp             HHTTCCTTSSSCCCEECCC
T ss_pred             HhhhCCCCCcEeCCCcCCC
Confidence            9999999999999999863

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.95  E-value=5.2e-27  Score=135.52  Aligned_cols=88  Identities=32%  Similarity=0.439  Sum_probs=77.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC-
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM-   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~-   79 (97)
                      |+|++||++|...++|+||||+| +.+|.|+|||+..     +.++||+|...++||++.+....|+||.+||+||+.+ 
T Consensus        17 isR~~Ae~lL~~~~~G~FLVR~S-~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~   90 (112)
T 1h9o_A           17 SNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVD-----GEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTS   90 (112)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEEC-SSTTCEEEEEEET-----TEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSC
T ss_pred             CCHHHHHHHhcCCCCceEEEeec-CCCCCEEEEEEEC-----CEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHHhhCc
Confidence            79999999998779999999999 8899999999995     8999999999888877765456899999999999984 


Q ss_pred             ----CCCcceeecCCCCCC
Q psy3300          80 ----PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ----~~~l~~~L~~p~~~p   94 (97)
                          .+++.++|+.|+..|
T Consensus        91 l~~~~~gl~~~L~~P~~~~  109 (112)
T 1h9o_A           91 LVQHNDSLNVTLAYPVYAQ  109 (112)
T ss_dssp             GGGTCTTCCCCCCEETTC-
T ss_pred             ccccCCCcCeeCCCCcCCC
Confidence                578899999997654

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.94  E-value=2.7e-27  Score=139.06  Aligned_cols=95  Identities=26%  Similarity=0.343  Sum_probs=81.3

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC-CCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE-FHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~-~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+.. ++|+||||+| +.+|.|+|||+.... ..++.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        18 isR~eAe~lL~~~g~~G~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~eLV~~y~   95 (125)
T 2ge9_A           18 MTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAE-KHLFSTIPELINYHQ   95 (125)
T ss_dssp             CCHHHHHHHHHHHTCTTEEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESST-TSCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCceEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECC-CCcCCCHHHHHHHhh
Confidence            7999999999866 8999999999 679999999997421 11378999999988767 77765 678999999999999


Q ss_pred             hCCCCcceeecCCCCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNPNFE   97 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p~~~   97 (97)
                      .+++++.++|+.|+..+.++
T Consensus        96 ~~~~~l~~~L~~P~~~~~~~  115 (125)
T 2ge9_A           96 HNSAGLISRLKYPVSQQNKN  115 (125)
T ss_dssp             CCCTTCSCCSSEECCSSCCC
T ss_pred             hCCCCCceeCCCccCCCCCC
Confidence            99999999999998776653

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.94  E-value=8.4e-27  Score=135.48  Aligned_cols=90  Identities=30%  Similarity=0.444  Sum_probs=75.2

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEe-CCc-EEEe--cccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT-AKG-YKIK--GFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~-~~~-~~l~--~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++  .++|+||||+|++.+|.|+||++..     +.++||+|... ++| |++.  +....|+||.+||+
T Consensus        21 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~   95 (117)
T 3pqz_A           21 ISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHL-----QKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVE   95 (117)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEET-----TEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEeC-----CeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHHH
Confidence            789999999975  4799999999999899999999995     89999999986 455 4433  22568999999999


Q ss_pred             HhhhCCCCcceeecCCCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~p~   95 (97)
                      ||+.++++++|+|+.|+.+.+
T Consensus        96 ~y~~~~~~l~~~L~~P~~~~~  116 (117)
T 3pqz_A           96 FHQLNRGILPCLLRHCCTRVA  116 (117)
T ss_dssp             HHHHCCTTSSSCCCEECC---
T ss_pred             HHhhCCCCCcEECCCcCcccC
Confidence            999999999999999997653

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.94  E-value=4.1e-27  Score=135.57  Aligned_cols=90  Identities=23%  Similarity=0.267  Sum_probs=77.5

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC-CCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE-FHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~-~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+.. ++|+||||+| +.+|.|+|||+.... ..++.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        18 isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   95 (110)
T 2ekx_A           18 ISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAE-NYCFDSIPKLIHYHQ   95 (110)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESST-TCCCSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECC-CCccCCHHHHHHHHe
Confidence            7999999999876 8999999999 679999999997421 11368999999987666 88865 678999999999999


Q ss_pred             hCCCCcceeecCCCC
Q psy3300          78 VMPELLPCTLSLHRY   92 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~   92 (97)
                      .+++++.|+|+.|+.
T Consensus        96 ~~~~~l~~~L~~Pv~  110 (110)
T 2ekx_A           96 HNSAGMITRLRHPVS  110 (110)
T ss_dssp             HSCCSSSCCCCEECC
T ss_pred             eCCCCCceecCccCC
Confidence            999999999999863

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.94  E-value=1.1e-26  Score=138.57  Aligned_cols=89  Identities=25%  Similarity=0.380  Sum_probs=77.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+|||+..     +.++||+|...++.|++.+ ...|+||.+||+||+.++
T Consensus        33 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~g~~~l~~-~~~F~sl~eLV~~y~~~~  106 (138)
T 2crh_A           33 MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYN-----VEVKHIKIMTAEGLYRITE-KKAFRGLTELVEFYQQNS  106 (138)
T ss_dssp             CCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEET-----TEEEEEECEEETTEEESST-TCCBSSHHHHHHHHTTSC
T ss_pred             CCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEEC-----CeEEEEEEEeCCCEEEECC-CCccCCHHHHHHHHHhCc
Confidence            7999999999988999999999998899999999995     8999999964343477765 678999999999999988


Q ss_pred             -----CCcceeecCCCCCCC
Q psy3300          81 -----ELLPCTLSLHRYNPN   95 (97)
Q Consensus        81 -----~~l~~~L~~p~~~p~   95 (97)
                           +++.++|+.|+..|.
T Consensus       107 l~~~~~~l~~~L~~Pv~~~~  126 (138)
T 2crh_A          107 LKDCFKSLDTTLQFPFKEPE  126 (138)
T ss_dssp             GGGTCTTCCCCCCEESSCCC
T ss_pred             cccccCCcCcccCCccCCCC
Confidence                 678899999986653

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.94  E-value=1.6e-26  Score=134.97  Aligned_cols=88  Identities=26%  Similarity=0.273  Sum_probs=78.3

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCC-CCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~-~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++. +|.|+||++..     +.++||+|...+++|.+.+ ...|+||.+||+||+.+
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~~g~y~LSv~~~-----~~v~H~~I~~~~g~~~l~~-~~~F~sl~~LI~~y~~~   91 (120)
T 2iug_A           18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKG-----GNNKLIKIFHRDGKYGFSD-PLTFSSVVELINHYRNE   91 (120)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSGGGCSEEEEEEET-----TEEEEEEEEEETTEEESSS-SCCBSSHHHHHHHHHHS
T ss_pred             CCHHHHHHHhcCCCCcEEEEECCCCCCCCcEEEEEEEC-----CEEEEEEEEEcCCEEEECC-CCccCCHHHHHHHHHhC
Confidence            78999999999889999999999988 89999999995     7999999998866688865 77899999999999999


Q ss_pred             CC-----CcceeecCCCCCC
Q psy3300          80 PE-----LLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~-----~l~~~L~~p~~~p   94 (97)
                      ++     ++.++|+.|+..+
T Consensus        92 ~~~~~~~~l~~~L~~Pv~r~  111 (120)
T 2iug_A           92 SLAQYNPKLDVKLLYPVSKY  111 (120)
T ss_dssp             CGGGTCGGGCCCCCEECCTT
T ss_pred             ccccccCCcceeeCCcCCcC
Confidence            85     5789999997654

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.94  E-value=6.8e-27  Score=136.16  Aligned_cols=90  Identities=14%  Similarity=0.216  Sum_probs=73.0

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecc-cCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF-TKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~-~~~F~sl~~Lv~~y~~   78 (97)
                      |+|.+||.+|... ..|+||||+|++.+ .|+|||+...+  +..|+||+|.+.+++|+|... ...|+||.+||+||+.
T Consensus        22 isR~eAE~lL~~~~~~GaFLVR~Se~~~-~ySLSVR~~~~--~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~yY~~   98 (125)
T 3maz_A           22 VSRKEATEMLQKNPSLGNMILRPGSDSR-NYSITIRQEID--IPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFVK   98 (125)
T ss_dssp             CCHHHHHHHHHHCGGGCSEEEEECTTSS-SEEEEEEECSS--SCEEEEEEEEEETTEEEECSSSCEEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCcEEEEeCCCCC-CEEEEEEecCC--CCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHHHHHh
Confidence            7899999988654 68999999998765 79999998422  478999999998655888631 3469999999999999


Q ss_pred             CCCCcceeecCCCCC
Q psy3300          79 MPELLPCTLSLHRYN   93 (97)
Q Consensus        79 ~~~~l~~~L~~p~~~   93 (97)
                      +++|+.++|..|+.+
T Consensus        99 ~adGl~~~L~~~c~~  113 (125)
T 3maz_A           99 ETRGNLRPFIASTDE  113 (125)
T ss_dssp             HTTTCCCBCCC----
T ss_pred             CCCcCcccccccccc
Confidence            999999999999843

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.94  E-value=2.1e-26  Score=133.93  Aligned_cols=92  Identities=25%  Similarity=0.311  Sum_probs=78.0

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC-CCCCceeEEEEE--EeCCc-EEEecccCCCCCHHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE-FHHLGIAHYLIL--RTAKG-YKIKGFTKEFSSLTSLITH   75 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~-~~~~~v~h~~I~--~~~~~-~~l~~~~~~F~sl~~Lv~~   75 (97)
                      |+|++||.+|+.. ++|+||||+| +.+|.|+||++...+ ..++.++||+|.  ...+| |++.+ ...|+||.+||+|
T Consensus        16 isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~-~~~F~sl~~LV~~   93 (118)
T 3s9k_A           16 ISRDKAEKLLLDTGKEGAFMVRDS-RTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAE-KYVFDSIPLLIQY   93 (118)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEEC-SSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEEC-SCCCSCHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEee-CCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECC-CcccCCHHHHHHH
Confidence            7999999999764 7999999999 889999999998521 123789999995  34444 88876 7789999999999


Q ss_pred             hhhCCCCcceeecCCCCCC
Q psy3300          76 HSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        76 y~~~~~~l~~~L~~p~~~p   94 (97)
                      |+.+++++.++|+.|+..|
T Consensus        94 y~~~~~~l~~~L~~Pv~~~  112 (118)
T 3s9k_A           94 HQYNGGGLVTRLRYPVCGS  112 (118)
T ss_dssp             HHHCCTTSSSCCCCCCCCS
T ss_pred             heeCCCCCccCCCCcCCCC
Confidence            9999999999999998765

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.94  E-value=3.6e-26  Score=132.72  Aligned_cols=88  Identities=26%  Similarity=0.354  Sum_probs=76.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+  ++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.  ...|+||.+||+||+.++
T Consensus        24 isR~eAe~lL~--~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~g~y~~~--~~~F~sl~eLV~~y~~~~   94 (116)
T 2kk6_A           24 IPRIEAQELLK--KQGDFLVRESHGKPGEYVLSVYSD-----GQRRHFIIQYVDNMYRFE--GTGFSNIPQLIDHHYTTK   94 (116)
T ss_dssp             CCHHHHHHTCC--STTCEEEEECTTCTTCEEEEEEET-----TEEEEEEEEEETTEEESS--SCEESCHHHHHHHHHHTT
T ss_pred             CCHHHHHHHhc--cCCcEEEEECCCCCCcEEEEEEEC-----CeEEEEEEEecCCEEEEC--CCEeCCHHHHHHHHhhCC
Confidence            79999999997  589999999999999999999995     899999999755546663  678999999999999987


Q ss_pred             CC----cceeecCCCCCC-CCC
Q psy3300          81 EL----LPCTLSLHRYNP-NFE   97 (97)
Q Consensus        81 ~~----l~~~L~~p~~~p-~~~   97 (97)
                      +.    +.+.|+.|+..| .||
T Consensus        95 ~~i~~~~~~~L~~Pv~r~~~We  116 (116)
T 2kk6_A           95 QVITKKSGVVLLNPIPKDKKWI  116 (116)
T ss_dssp             CCSCTTTTCCCCSCCCCCCCCC
T ss_pred             CCccCCCCCeECcccCCCCCCC
Confidence            64    568999999988 775

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.94  E-value=5.1e-26  Score=133.78  Aligned_cols=88  Identities=24%  Similarity=0.394  Sum_probs=76.8

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEe-CCc-EEE--ecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT-AKG-YKI--KGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~-~~~-~~l--~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++.  ++|+||||+|++.+|.|+||++..     +.++||+|... ++| |++  .+....|+||.+||+
T Consensus        33 isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV~  107 (126)
T 2aug_A           33 ISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHG-----QKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVE  107 (126)
T ss_dssp             CCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEET-----TEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEcC-----CeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHHH
Confidence            7999999999874  799999999999999999999995     89999999985 355 655  322568999999999


Q ss_pred             HhhhCCCCcceeecCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~   93 (97)
                      ||+.++++++|+|+.|+.+
T Consensus       108 ~y~~~~~~l~~~L~~P~~r  126 (126)
T 2aug_A          108 FYQLNKGVLPCKLKHYCAR  126 (126)
T ss_dssp             HHTTCCTTSSSCCCEECCC
T ss_pred             HHhhCCCCCceecCCCcCC
Confidence            9999999999999999864

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.94  E-value=3.3e-26  Score=133.42  Aligned_cols=87  Identities=24%  Similarity=0.402  Sum_probs=75.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+| |+||++..     +.++||+|...++| |++.+....|+||.+||+||+.+
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~~-y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~y~~~   96 (119)
T 2cs0_A           23 ISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQ-----SSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQK   96 (119)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCS-----SSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTS
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCC-EEEEEEEC-----CEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHHHhhC
Confidence            7899999999888999999999999888 99999985     89999999987665 88875467899999999999999


Q ss_pred             CCC-cceeecCCCCC
Q psy3300          80 PEL-LPCTLSLHRYN   93 (97)
Q Consensus        80 ~~~-l~~~L~~p~~~   93 (97)
                      +++ ..+.|+.|+..
T Consensus        97 ~l~~~~~~L~~P~~~  111 (119)
T 2cs0_A           97 PIEPRRELLTQPCRQ  111 (119)
T ss_dssp             CCSSCCCCCCSBCCC
T ss_pred             cCCCCCCEeCccCCC
Confidence            875 45788888644

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.94  E-value=2.4e-26  Score=132.15  Aligned_cols=88  Identities=23%  Similarity=0.267  Sum_probs=75.3

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+.. ++|+||||+|++.+|.|+||++..     +.++||+|...++.|.+.+ ...|+||.+||+||+.+
T Consensus        14 isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~~~   87 (109)
T 3tkz_A           14 ITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRN-----GAVTHIKIQNTGDYYDLYG-GEKFATLAELVQYYMEH   87 (109)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECSSCEESSS-SCCBSSHHHHHHHHHHS
T ss_pred             CCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEEC-----CEEEEEEEEeCCCEEEecC-CcccCCHHHHHHHHHhC
Confidence            7999999999864 899999999999999999999995     8999999987644466665 77899999999999998


Q ss_pred             C------CCcceeecCCCCCC
Q psy3300          80 P------ELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~------~~l~~~L~~p~~~p   94 (97)
                      +      +++.++|+.|+..+
T Consensus        88 ~~~l~~~~gl~~~L~~Pv~~~  108 (109)
T 3tkz_A           88 HGQLKEKNGDVIELKYPLNCA  108 (109)
T ss_dssp             TTSEEETTSCBCCCCEECC--
T ss_pred             cCccccCCCceEECCCcccCC
Confidence            7      56779999997543

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=1.8e-25  Score=128.93  Aligned_cols=84  Identities=26%  Similarity=0.356  Sum_probs=75.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.  ...|+||.+||+||+.+
T Consensus        26 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~~LV~~y~~~   98 (111)
T 2eo3_A           26 VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSEN-----SRVSHYIINSLPNRRFKIG--DQEFDHLPALLEFYKIH   98 (111)
T ss_dssp             CCHHHHHHHHSSCCTTCEEEEECSSSSSCEEEEEEET-----TEEEEEEEEEETTTEEEET--TCCBSSHHHHHHHHTTS
T ss_pred             CCHHHHHHHhcCCCCceEEEEeecCCCCCEEEEEEeC-----CeEEEEEEEEcCCCCEEEC--CcccCCHHHHHHHHhhC
Confidence            7999999999877999999999999999999999984     89999999986665 7774  67899999999999999


Q ss_pred             CCCcceeecCCCC
Q psy3300          80 PELLPCTLSLHRY   92 (97)
Q Consensus        80 ~~~l~~~L~~p~~   92 (97)
                      ++. .++|+.|++
T Consensus        99 ~l~-~~~L~~Pv~  110 (111)
T 2eo3_A           99 YLD-TTTLIEPAP  110 (111)
T ss_dssp             CSS-SSCCCCBCC
T ss_pred             CCC-CccCCCcCc
Confidence            876 688998875

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.93  E-value=1.5e-26  Score=135.89  Aligned_cols=91  Identities=25%  Similarity=0.335  Sum_probs=78.0

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecC-CCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPK-EFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~-~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+.. ++|+||||+| +.+|.|+|||+... ...++.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus        23 isR~eAe~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~-~~~F~sl~eLV~~y~  100 (125)
T 2dm0_A           23 ITRNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAE-RHAFQSIPELIWYHQ  100 (125)
T ss_dssp             CCHHHHHHHHHHHCSTTCBCEEEE-TTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSS-SCCCSSHHHHHHHHT
T ss_pred             CCHHHHHHHHhhcCCCCEEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECC-CCccCCHHHHHHHhh
Confidence            7999999999865 8999999999 67999999999842 111368999999987766 88765 678999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .+++++.++|+.|+..
T Consensus       101 ~~~~~l~~~L~~P~~~  116 (125)
T 2dm0_A          101 HNAAGLMTRLRYPVGL  116 (125)
T ss_dssp             TCCCSSSCCCCSBCCS
T ss_pred             hCCCCCccCCCCccCC
Confidence            9999999999999754

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=5e-26  Score=132.67  Aligned_cols=87  Identities=20%  Similarity=0.267  Sum_probs=77.5

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++||++|+.. ++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.  ...|.||.+||+||+.
T Consensus        23 isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~~LI~~y~~   95 (119)
T 2gsb_A           23 ISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN-----ENIQRFKICPTPNNQFMMG--GRYYNSIGDIIDHYRK   95 (119)
T ss_dssp             SCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEECS-----SCBCCCCEEEETTTEEEES--SCCBSCHHHHHHHHTT
T ss_pred             CCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEEC-----CEEEEEEEEEcCCCCEEEC--CcccCCHHHHHHHHhh
Confidence            7899999999875 789999999999999999999985     89999999987666 6664  5789999999999999


Q ss_pred             CCCCcceeecCCCCCC
Q psy3300          79 MPELLPCTLSLHRYNP   94 (97)
Q Consensus        79 ~~~~l~~~L~~p~~~p   94 (97)
                      +++++.+.|+.|+..+
T Consensus        96 ~~l~~~~~L~~Pv~~~  111 (119)
T 2gsb_A           96 EQIVEGYYLKEPVPMQ  111 (119)
T ss_dssp             SCSBTTBCCCCCCCCC
T ss_pred             CccCCCCEeCCccCCC
Confidence            9998889999997653

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.93  E-value=8.9e-26  Score=139.05  Aligned_cols=91  Identities=25%  Similarity=0.324  Sum_probs=78.9

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++......++.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus        81 isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~-~~~F~sl~~LV~~y~  159 (175)
T 4d8k_A           81 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISP-RITFPGLHELVRHYT  159 (175)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESST-TSEESSHHHHHHHHH
T ss_pred             ccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECC-CCccCCHHHHHHHHh
Confidence            689999999976  47999999999999999999999843222478999999987666 77764 678999999999999


Q ss_pred             hCCCCcceeecCCCC
Q psy3300          78 VMPELLPCTLSLHRY   92 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~   92 (97)
                      .++++|.|+|+.||+
T Consensus       160 ~~~~gl~~~L~~Pc~  174 (175)
T 4d8k_A          160 NASDGLCTRLSRPCQ  174 (175)
T ss_dssp             HCCTTSSSCCCSBCC
T ss_pred             hCCCCCcccCCCcCC
Confidence            999999999999985

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.93  E-value=3.7e-26  Score=134.08  Aligned_cols=87  Identities=17%  Similarity=0.230  Sum_probs=76.3

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|++. ++|+||||+|+ .+|.|+||++..     +.++||+|...++.|.+.+ ...|+||.+||+||+.+
T Consensus        26 isR~eAe~lL~~~~~~G~FLVR~S~-~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~~~   98 (124)
T 2eob_A           26 LSRGEAEDMLMRIPRDGAFLIRKRE-GTDSYAITFRAR-----GKVKHCRINRDGRHFVLGT-SAYFESLVELVSYYEKH   98 (124)
T ss_dssp             CCHHHHHHHHHHCCSSSEEEEECCT-TSSCEEEEEEET-----TEEEEEEEEESSSCEESSS-SCCBSSHHHHHHHHTTS
T ss_pred             CCHHHHHHHHhcCCCCCEEEEEecC-CCCCEEEEEEeC-----CeEEEEEEEECCCEEEECC-CCcCCCHHHHHHHHhhC
Confidence            7899999999876 68999999998 899999999995     8999999997644466653 55699999999999999


Q ss_pred             CCCcceeecCCCCCC
Q psy3300          80 PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~~l~~~L~~p~~~p   94 (97)
                      ++++.++|+.|+..+
T Consensus        99 ~~~~~~~L~~P~~~~  113 (124)
T 2eob_A           99 ALYRKMRLRYPVTPE  113 (124)
T ss_dssp             CSSSSCCSCEECCHH
T ss_pred             CCCCCcCCCCcCCcH
Confidence            999999999998654

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.93  E-value=1.8e-25  Score=133.65  Aligned_cols=86  Identities=20%  Similarity=0.169  Sum_probs=76.2

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEec--ccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKG--FTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~--~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++||++|++.++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.+  ....|+||.+||+||+.
T Consensus        31 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~-----~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~~y~~  105 (141)
T 2vif_A           31 ITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSH-----GKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIG  105 (141)
T ss_dssp             CCHHHHHHHTTTSCTTCEEEEECSSTTCSEEEEEEET-----TEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHHHHHH
T ss_pred             CCHHHHHHHhcCCCCceEEEEecCCCCCCEEEEEEEC-----CEEEEEEEEEECCEEEEeecCCCCccCCHHHHHHHHhh
Confidence            7899999999888999999999999899999999985     8999999999866688873  37789999999999999


Q ss_pred             CC-CCcceeecCCC
Q psy3300          79 MP-ELLPCTLSLHR   91 (97)
Q Consensus        79 ~~-~~l~~~L~~p~   91 (97)
                      ++ +|+.|.|+.+.
T Consensus       106 ~~~~gl~c~l~~~~  119 (141)
T 2vif_A          106 DSENGAFCYSRSRL  119 (141)
T ss_dssp             HHHHTCCEEESCCS
T ss_pred             CCCCCcceeccccC
Confidence            98 68888877653

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.93  E-value=1.9e-26  Score=134.31  Aligned_cols=87  Identities=16%  Similarity=0.211  Sum_probs=74.5

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCC--CCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF--SSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F--~sl~~Lv~~y~   77 (97)
                      |+|++||++|.. .++|+||||+|++.+|.|+|||+...+ .++.|+||+|...+++|++.+ ...|  +||.+||+||+
T Consensus        28 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~-~~~~v~H~~I~~~~g~~~i~~-~~~F~~~sL~eLV~~y~  105 (118)
T 2el8_A           28 VSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHN-GTHVVRHYKVKREGPKYVIDV-EQPFSCTSLDAVVNYFV  105 (118)
T ss_dssp             CCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBT-TBCCCEEECBCCBTTBCCBSS-SSCCCCSSHHHHHHHHH
T ss_pred             CCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecC-CCCcEEEEEEEEcCCEEEEeC-CCeECCCCHHHHHHHHh
Confidence            799999999964 489999999999999999999998321 127899999988555588865 6789  99999999999


Q ss_pred             hCCCCcceeecC
Q psy3300          78 VMPELLPCTLSL   89 (97)
Q Consensus        78 ~~~~~l~~~L~~   89 (97)
                      .+++|++|+|.+
T Consensus       106 ~~~~gl~~~L~~  117 (118)
T 2el8_A          106 SHTKKALVPFLL  117 (118)
T ss_dssp             HHSSSCCCBCCC
T ss_pred             hCCCCCeEeeec
Confidence            999999999875

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.92  E-value=2.3e-25  Score=132.79  Aligned_cols=88  Identities=27%  Similarity=0.320  Sum_probs=75.0

Q ss_pred             CCHHHHHHHhCC------CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeC-Cc---EEEecccCCCCCHH
Q psy3300           1 MIQEITLEVLSQ------EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTA-KG---YKIKGFTKEFSSLT   70 (97)
Q Consensus         1 isr~~ae~~L~~------~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~-~~---~~l~~~~~~F~sl~   70 (97)
                      -+|++||++|++      .++|+||||+|++.+|.|+|||+..     +.++||+|.... +|   |++.+ ...|.||.
T Consensus        30 ~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~gg~~~~~l~~-~~~F~sl~  103 (138)
T 2dx0_A           30 ESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRS-----GRVQHCRIRSTMENGVMKYYLTD-NLTFNSIY  103 (138)
T ss_dssp             CCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEEEEETTEEEEESST-TSCBSSHH
T ss_pred             CCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEEC-----CeEEEEEEEEecCCCceEEEeCC-CCcCCCHH
Confidence            079999999984      5899999999998899999999995     899999999874 33   77765 78899999


Q ss_pred             HHHHHhhhCCC---CcceeecCCCCCC
Q psy3300          71 SLITHHSVMPE---LLPCTLSLHRYNP   94 (97)
Q Consensus        71 ~Lv~~y~~~~~---~l~~~L~~p~~~p   94 (97)
                      +||+||+.+++   ++.++|+.|+..|
T Consensus       104 eLI~~y~~~~l~~~gl~~~L~~Pv~~~  130 (138)
T 2dx0_A          104 ALIQHYREAHLRCAEFELRLTDPVPNP  130 (138)
T ss_dssp             HHHHHTTTSCCCCGGGSSCCCCBCC--
T ss_pred             HHHHHHhhCCCCCCCcccccCccCCCC
Confidence            99999999885   7889999997654

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.92  E-value=1.9e-25  Score=127.47  Aligned_cols=85  Identities=24%  Similarity=0.217  Sum_probs=72.8

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+  ++|+||||+|++.+|.|+||++..     +.++||+|...++.|.+ + ...|+||.+||+||+.++
T Consensus        14 isR~~Ae~lL~--~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~g~~~~-~-~~~F~sl~~LI~~y~~~~   84 (104)
T 1mil_A           14 LSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQS-----GQPKHLLLVDPEGVVRT-K-DHRFESVSHLISYHMDNH   84 (104)
T ss_dssp             CCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEET-----TEEEEEEEBCTTSSEEC-S-SCEESSHHHHHHHHHHHT
T ss_pred             CCHHHHHHHhc--cCCcEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEEeCCCEEEE-C-CceeCCHHHHHHHHhhCC
Confidence            78999999997  689999999999999999999995     89999999743333665 3 678999999999999987


Q ss_pred             C-----CcceeecCCCCCC
Q psy3300          81 E-----LLPCTLSLHRYNP   94 (97)
Q Consensus        81 ~-----~l~~~L~~p~~~p   94 (97)
                      +     ++.+.|+.|+..|
T Consensus        85 ~p~~~~g~~~~L~~Pv~r~  103 (104)
T 1mil_A           85 LPIISAGSELCLQQPVERK  103 (104)
T ss_dssp             CCEEETTEEECCCEECCCC
T ss_pred             CccccCCceEEeCccCCCC
Confidence            5     6778999998765

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.92  E-value=9.3e-25  Score=125.51  Aligned_cols=84  Identities=27%  Similarity=0.434  Sum_probs=72.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC-----------------c-EEEecc
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK-----------------G-YKIKGF   62 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~-----------------~-~~l~~~   62 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...++                 + |.+ + 
T Consensus         7 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l-~-   79 (109)
T 1ju5_A            7 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSEN-----SRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI-G-   79 (109)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSSTTEEEEEEECS-----SCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEE-T-
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEEC-----CeEEEEEEEECCCCcccccccccccccccccEEEe-C-
Confidence            7999999999888999999999999999999999985     8999999988653                 3 555 4 


Q ss_pred             cCCCCCHHHHHHHhhhCCCCcceeecCCCC
Q psy3300          63 TKEFSSLTSLITHHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        63 ~~~F~sl~~Lv~~y~~~~~~l~~~L~~p~~   92 (97)
                      ...|+||.+||+||+.++.. .++|..|+.
T Consensus        80 ~~~F~sl~~LV~~y~~~~l~-~~~L~~Pv~  108 (109)
T 1ju5_A           80 DQEFDSLPALLEFYKIHYLD-TTTLIEPVS  108 (109)
T ss_dssp             TEEESSHHHHHHHHHHSCSS-SSCCCEESC
T ss_pred             CcccCCHHHHHHHHhhCCCC-CeecCccCC
Confidence            67899999999999998755 357888875

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.92  E-value=2e-24  Score=139.77  Aligned_cols=88  Identities=28%  Similarity=0.399  Sum_probs=78.9

Q ss_pred             CCHHHHHHHhC--CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLS--QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~--~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+  ..++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus        13 isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   86 (254)
T 2oq1_A           13 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD-----VRFHHFPIERQLNGTYAIAG-GKAHCGPAELCEFYS   86 (254)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEETT-SCCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEEC-----CeEEEEEEEEeCCCCEEeCC-CCccCCHHHHHHHHH
Confidence            79999999995  45899999999999999999999984     89999999985555 88876 788999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.|+|+.|+..|
T Consensus        87 ~~~~~l~~~L~~p~~~~  103 (254)
T 2oq1_A           87 RDPDGLPCNLRKPCNRP  103 (254)
T ss_dssp             HCCTTSSSCCCSBCCCC
T ss_pred             hCCCCcccccccccCCC
Confidence            99999999999997554

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.92  E-value=3.7e-24  Score=131.33  Aligned_cols=88  Identities=22%  Similarity=0.313  Sum_probs=75.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEeccc------CCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT------KEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~------~~F~sl~~Lv~   74 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.+..      ..|+||.+||+
T Consensus        24 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~-----~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI~   98 (169)
T 2c9w_A           24 MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTS-----AGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLID   98 (169)
T ss_dssp             CCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEET-----TEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHH
T ss_pred             CCHHHHHHHcCCCCCcEEEEecCCCCCCeEEEEEEEC-----CeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHHHH
Confidence            7999999999888999999999999999999999995     899999999976669987632      78999999999


Q ss_pred             HhhhCCCC------------cceeecCCCCC
Q psy3300          75 HHSVMPEL------------LPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~~------------l~~~L~~p~~~   93 (97)
                      ||+.++++            +.+.|+.|...
T Consensus        99 ~y~~~~~~~~~~~~~~~~~~~~~~L~~P~~~  129 (169)
T 2c9w_A           99 YYVQMCKDKRTGPEAPRNGTVHLYLTKPLYT  129 (169)
T ss_dssp             HHHHHTC--------------CCCCCCBCCS
T ss_pred             HHHhCcCCCcccccCCCCcCccceecCcccc
Confidence            99987643            56788888754

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.91  E-value=2.2e-24  Score=139.57  Aligned_cols=86  Identities=27%  Similarity=0.331  Sum_probs=78.1

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+..  ++|+||||+| +.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus       166 isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~~-~~~F~sl~~LV~~y~  238 (254)
T 2oq1_A          166 LTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYG-----KTVYHYLISQDKAGKYCIPE-GTKFDTLWQLVEYLK  238 (254)
T ss_dssp             CCHHHHHHHHHSSCCCTTEEEEEEC-SSTTEEEEEEEET-----TEEEEEEEEECTTSCEESTT-SCCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEEC-----CeEEEEEEEEcCCCCEEECC-CceECCHHHHHHHHH
Confidence            7899999999865  8999999999 8899999999995     89999999987666 77765 788999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .+++++.++|+.|+++
T Consensus       239 ~~~~~l~~~L~~p~~r  254 (254)
T 2oq1_A          239 LKADGLIYCLKEACPN  254 (254)
T ss_dssp             HCCTTSSSCCCSBCCC
T ss_pred             hCCCCCCeeCCccCcC
Confidence            9999999999999864

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.91  E-value=3.4e-24  Score=138.66  Aligned_cols=88  Identities=31%  Similarity=0.393  Sum_probs=78.7

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+ ...|+||.+||+||+
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~eLv~~y~   85 (254)
T 1a81_A           12 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHG-----RKAHHYTIERELNGTYAIAG-GRTHASPADLCHYHS   85 (254)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEETT-SCCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEEC-----CeeEEEEEEEcCCCCEEeCC-CCCcCCHHHHHHHHH
Confidence            789999999953  4899999999999999999999984     89999999986555 88876 789999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.|+|+.|+..|
T Consensus        86 ~~~~~l~~~L~~p~~~~  102 (254)
T 1a81_A           86 QESDGLVCLLKKPFNRP  102 (254)
T ss_dssp             TCCTTSSSCCCEECCCC
T ss_pred             hCCCCceECCccccCCC
Confidence            99999999999987543

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.91  E-value=1.4e-24  Score=123.41  Aligned_cols=84  Identities=20%  Similarity=0.284  Sum_probs=71.8

Q ss_pred             CCHHHHHHHhC-CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~-~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+ ..++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.  ...|+||.+||+||+.+
T Consensus        12 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~g~~~l~--~~~F~sl~~LV~~y~~~   84 (102)
T 2cia_A           12 VTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKAS-----GKNKHFKVQLVDNVYCIG--QRRFHTMDELVEHYKKA   84 (102)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECCS-----SSCEEEEEEEETTEEEET--TEEESSHHHHHHHHHHS
T ss_pred             CCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEeC-----CeeEEEEEEecCCEEEEC--CcCcCCHHHHHHHHhhC
Confidence            78999999995 45899999999999999999999985     899999999665568886  46899999999999998


Q ss_pred             CC-----CcceeecCCC
Q psy3300          80 PE-----LLPCTLSLHR   91 (97)
Q Consensus        80 ~~-----~l~~~L~~p~   91 (97)
                      +.     +..+.|+.|.
T Consensus        85 ~l~~~~~~~~~~L~~Pi  101 (102)
T 2cia_A           85 PIFTSEHGEKLYLVRAL  101 (102)
T ss_dssp             CSEECTTSCEECCCEEC
T ss_pred             ccccCCCCceEEeCCCC
Confidence            64     4567777774

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.91  E-value=8.5e-25  Score=133.47  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=76.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecc------cCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF------TKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~------~~~F~sl~~Lv~   74 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+|||+..     +.++||+|...+++|++.+.      ...|+||.+||+
T Consensus        30 IsR~eAe~lL~~~~~GtFLVR~S~s~~g~y~LSvr~~-----~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~  104 (164)
T 2bbu_A           30 VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQ-----SGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVH  104 (164)
T ss_dssp             SCHHHHHHHHHHSSTTCCEEEECSTTSCCEEEEECCT-----TCCEEEECEEETTEEESSSCCCCCSSCTTCCHHHHHHH
T ss_pred             CCHHHHHHHhcCCCCCCEEEEECCCCCCCEEEEEEEC-----CceEEEEEEeCCCeEEEecCcccccCCCccCCHHHHHH
Confidence            7899999999878899999999999999999999984     89999999986666888752      168999999999


Q ss_pred             HhhhCCC--CcceeecCCCCC
Q psy3300          75 HHSVMPE--LLPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~--~l~~~L~~p~~~   93 (97)
                      ||+.+++  +++|+|.-|.+.
T Consensus       105 ~Y~~~~~~~~~~~~l~ep~~~  125 (164)
T 2bbu_A          105 HYMPPPGTPSFSLPPTEPSSE  125 (164)
T ss_dssp             HHSCCCSCSCCSSSCSSCCSS
T ss_pred             HHhhCCCCCCccccccCCCcc
Confidence            9998876  688888887653

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.91  E-value=2.9e-24  Score=121.79  Aligned_cols=77  Identities=26%  Similarity=0.465  Sum_probs=68.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.  ...|+||.+||+||+.+
T Consensus        16 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~~LV~~y~~~   88 (100)
T 1r1p_A           16 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHE-----DDVQHFKVMRDTKGNYFLW--TEKFPSLNKLVDYYRTT   88 (100)
T ss_dssp             CCHHHHHHHHHTSCTTBEEEEECSSSTTCEEEEEECS-----SSEEEEECEECTTCCEESS--SCEESSHHHHHHHHTTS
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEEC-----CEEEEEEEEEcCCCCEEEe--CCEeCCHHHHHHHHHhC
Confidence            7899999999988999999999999999999999995     89999999987655 7775  46899999999999998


Q ss_pred             CCCcc
Q psy3300          80 PELLP   84 (97)
Q Consensus        80 ~~~l~   84 (97)
                      +++..
T Consensus        89 ~l~~~   93 (100)
T 1r1p_A           89 SISKQ   93 (100)
T ss_dssp             CSSSS
T ss_pred             CCCCC
Confidence            76543

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.91  E-value=4.3e-24  Score=138.16  Aligned_cols=86  Identities=24%  Similarity=0.339  Sum_probs=78.1

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|++.  ++|+||||+| +.+|.|+||++..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus       165 isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~  237 (254)
T 1a81_A          165 ISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHE-----GKVLHYRIDKDKTGKLSIPE-GKKFDTLWQLVEHYS  237 (254)
T ss_dssp             CCHHHHHHHHHSSCCCTTCEEEEEC-SSSSCEEEEEEET-----TEEEEEEEEECTTSCEECTT-SCCBSCHHHHHHHHT
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEEC-----CEEEEEEEEEcCCCCEEecC-CcccCCHHHHHHHHH
Confidence            7899999999864  8999999999 8899999999995     89999999987666 77765 788999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .+++++.++|+.|+++
T Consensus       238 ~~~~~l~~~L~~p~~r  253 (254)
T 1a81_A          238 YKADGLLRVLTVPCQK  253 (254)
T ss_dssp             TCCTTSSSCCCCBCCC
T ss_pred             HCCCCCCeecCCcCCC
Confidence            9999999999999875

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.91  E-value=2.8e-24  Score=128.49  Aligned_cols=87  Identities=16%  Similarity=0.195  Sum_probs=73.1

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCC--CCCeeEEEEEecCCCCCCceeEEEEEEeCCc--EEEec---ccCCCCCHHHH
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTT--KPGCFALSLRVPKEFHHLGIAHYLILRTAKG--YKIKG---FTKEFSSLTSL   72 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~--~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~--~~l~~---~~~~F~sl~~L   72 (97)
                      |+|++||++|.+ .++|+||||+|++  .+|.|+|||+..     +.++||+|.+..+|  |.+..   ....|+||.+|
T Consensus        30 isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~eL  104 (141)
T 2eo6_A           30 CDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFN-----KRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEI  104 (141)
T ss_dssp             CCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEET-----TEEEEEEECEETTTTEECSSSCCTTCCCBSSHHHH
T ss_pred             CCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEEC-----CEEEEEEEEEeCCCCEEEEccccCCCCccCCHHHH
Confidence            799999999964 4799999999986  789999999995     89999999876544  44542   14679999999


Q ss_pred             HHHhhhCCCCc---------ceeecCCCC
Q psy3300          73 ITHHSVMPELL---------PCTLSLHRY   92 (97)
Q Consensus        73 v~~y~~~~~~l---------~~~L~~p~~   92 (97)
                      |+||+.+++++         .+.|++|..
T Consensus       105 V~~y~~~~~~l~~~~~~~~~~~~L~~Pv~  133 (141)
T 2eo6_A          105 VNSHQHNPLVLIDSQNNTKDSTRLKYAVK  133 (141)
T ss_dssp             HHHHHHSCCCCCCSSSCCCCCCCCCCBCC
T ss_pred             HHHHhhCCccceecccCCCCceEeCcCcc
Confidence            99999999998         678888863

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.91  E-value=5.2e-24  Score=119.92  Aligned_cols=75  Identities=32%  Similarity=0.537  Sum_probs=66.7

Q ss_pred             CCHHHHHHHhCCCC-CceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEP-VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~-~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++||++|+..+ +|+||||+|++.+|.|+||++..     +.++||+|....+| |++.  ...|+||.+||+||+.
T Consensus        10 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~~LV~~y~~   82 (96)
T 1jyr_A           10 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG-----NDVQHFKVLRDGAGKYFLW--VVKFNSLNELVDYHRS   82 (96)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEET-----TEEEEEECEECTTSCEESS--SCEESSHHHHHHHTTS
T ss_pred             CCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEeC-----CeEEEEEEEEcCCCCEEEC--CcccCCHHHHHHHHhh
Confidence            79999999999875 99999999999999999999995     89999999987665 7775  4789999999999999


Q ss_pred             CCCC
Q psy3300          79 MPEL   82 (97)
Q Consensus        79 ~~~~   82 (97)
                      ++..
T Consensus        83 ~~l~   86 (96)
T 1jyr_A           83 TSVS   86 (96)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            8753

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.91  E-value=4.9e-24  Score=128.83  Aligned_cols=75  Identities=21%  Similarity=0.362  Sum_probs=67.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEeccc------CCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT------KEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~------~~F~sl~~Lv~   74 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.+..      ..|+||.+||+
T Consensus        41 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~  115 (152)
T 2hmh_A           41 VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQ-----SGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVH  115 (152)
T ss_dssp             CCHHHHHHHHHTSCTTEEEEEECCSTTCSEEEEEEET-----TEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHHHHHH
T ss_pred             CCHHHHHHHhcCCCCCcEEEEeCCCCCCcEEEEEEcC-----CceEEEEEEecCCEEEEecccccccccCccCCHHHHHH
Confidence            7999999999888999999999999999999999995     899999999855558887621      78999999999


Q ss_pred             HhhhCC
Q psy3300          75 HHSVMP   80 (97)
Q Consensus        75 ~y~~~~   80 (97)
                      ||+.++
T Consensus       116 ~Y~~~~  121 (152)
T 2hmh_A          116 HYMPPQ  121 (152)
T ss_dssp             HTCCCC
T ss_pred             HHhhCc
Confidence            999886

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.90  E-value=1.1e-23  Score=122.33  Aligned_cols=85  Identities=29%  Similarity=0.437  Sum_probs=71.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++||++|+.. ++|+||||+|++.+|.|+||++..     +.++||+|....+| |++.  ...|+||.+||+||+.
T Consensus        13 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~eLV~~y~~   85 (117)
T 3ov1_A           13 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG-----NDVQHFKVLRDGAGKYFLW--VVKFNSLNELVDYHRS   85 (117)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEET-----TEEEEEECEECTTSCEESS--SCEESSHHHHHHHTTT
T ss_pred             CCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEecC-----CceEEEEEEECCCCeEEEC--CCCcCCHHHHHHHHhh
Confidence            7999999999886 689999999999999999999995     89999999887666 7765  4689999999999999


Q ss_pred             CCCCc--ceeecCCCC
Q psy3300          79 MPELL--PCTLSLHRY   92 (97)
Q Consensus        79 ~~~~l--~~~L~~p~~   92 (97)
                      ++...  ...|+.|..
T Consensus        86 ~~l~~~~~~~L~~~~~  101 (117)
T 3ov1_A           86 TSVSRNQQIFLRDIEQ  101 (117)
T ss_dssp             SCSCSSSCCCCBCCCC
T ss_pred             CCCCCCCceEecCCCc
Confidence            87642  244554443

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.90  E-value=8.2e-24  Score=122.44  Aligned_cols=84  Identities=25%  Similarity=0.273  Sum_probs=72.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|+  ++|+||||+|++.+ .|+||++..     +.++||+|...++.|.+.  ...|+||.+||+||+.+.
T Consensus        23 isR~eAe~lL~--~~G~FLVR~S~~~~-~y~LSv~~~-----~~v~H~~I~~~~g~~~~~--~~~F~sl~~LV~~y~~~~   92 (114)
T 1wqu_A           23 IPRAEVAELLV--HSGDFLVRESQGKQ-EYVLSVLWD-----GLPRHFIIQSLDNLYRLE--GEGFPSIPLLIDHLLSTQ   92 (114)
T ss_dssp             CCHHHHHTTCC--STTEEEEEECSSSC-CEEEEEEET-----TEEEEEECEECSSSEESS--SCCBSSHHHHHHHHHHHC
T ss_pred             CCHHHHHHHhc--cCCeEEEEEcCCCC-CEEEEEEEC-----CEEEEEEEEecCCEEEEC--CCCCCCHHHHHHHHHHCC
Confidence            78999999997  48999999998877 899999995     899999998766556664  678999999999999987


Q ss_pred             CCc----ceeecCCCCCC
Q psy3300          81 ELL----PCTLSLHRYNP   94 (97)
Q Consensus        81 ~~l----~~~L~~p~~~p   94 (97)
                      +++    .+.|..|+..+
T Consensus        93 ~~~~~~~~~~L~~Pv~r~  110 (114)
T 1wqu_A           93 QPLTKKSGVVLHRAVPSG  110 (114)
T ss_dssp             CCSCTTTCCCCCEECCSC
T ss_pred             CCcCCCCCcEECcccCCC
Confidence            654    68899987654

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.90  E-value=1.5e-23  Score=120.84  Aligned_cols=76  Identities=22%  Similarity=0.364  Sum_probs=67.4

Q ss_pred             CCHHHHHHHhCCC---CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHh
Q psy3300           1 MIQEITLEVLSQE---PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         1 isr~~ae~~L~~~---~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      |+|++||++|++.   ++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.  ...|+||.+||+||
T Consensus        16 isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~--~~~F~sl~~LV~~y   88 (111)
T 2hdv_A           16 LSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQ-----GKAKHLRLSLNAAGQCRVQ--HLHFQSIFDMLEHF   88 (111)
T ss_dssp             CCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEET-----TEEEEEEEEECTTCCEEET--TEEESSHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEeC-----CeEEEEEEEEcCCCCEEeC--CceeCCHHHHHHHH
Confidence            7999999999875   899999999999999999999995     89999999987666 6664  67899999999999


Q ss_pred             hhCCCCc
Q psy3300          77 SVMPELL   83 (97)
Q Consensus        77 ~~~~~~l   83 (97)
                      +.++..+
T Consensus        89 ~~~~l~~   95 (111)
T 2hdv_A           89 RVHPIPL   95 (111)
T ss_dssp             TTSCCC-
T ss_pred             hhCCccc
Confidence            9987765

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.90  E-value=1.2e-23  Score=138.50  Aligned_cols=88  Identities=31%  Similarity=0.443  Sum_probs=78.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC-
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM-   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~-   79 (97)
                      |+|++|+.+|...++|+||||.| +.+|.|+|||+..     +.|+||+|...++||++.+....|+||.+||+||+.+ 
T Consensus       201 IsR~eAE~lL~~~~~GtFLVR~S-s~~g~y~LSv~~~-----~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV~~Y~~~~  274 (302)
T 2y3a_B          201 INRTQAEEMLSGKRDGTFLIRES-SQRGCYACSVVVD-----GDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHAS  274 (302)
T ss_dssp             CCHHHHHHHHTTSCTTBEEBCCC-SSTTCEEEEEECS-----SSEEEEEEEEETTEEESBTTBCCCSSHHHHHHTTSSSC
T ss_pred             CCHHHHHHHhcCCCCCcEEEEec-cCCCceEEEEEeC-----CeeEEEEEEECCCceEEeCCCCCCCCHHHHHHHHHhCC
Confidence            78999999998779999999999 8899999999985     8999999999888887765456899999999999985 


Q ss_pred             ----CCCcceeecCCCCCC
Q psy3300          80 ----PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ----~~~l~~~L~~p~~~p   94 (97)
                          .+|+.++|+.|+..|
T Consensus       275 L~~~~~gl~~~L~~Pv~~~  293 (302)
T 2y3a_B          275 LVQHNDALTVTLAHPVRAP  293 (302)
T ss_dssp             STTTCSSCCCCCSBCSCCC
T ss_pred             ccccCCCCceeeCCccCCC
Confidence                478899999997653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.90  E-value=4.4e-23  Score=146.35  Aligned_cols=88  Identities=28%  Similarity=0.397  Sum_probs=79.5

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++..     +.++||+|...++| |++.+ ...|.||.+||+||+
T Consensus        15 i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~~-----~~~~h~~i~~~~~g~~~~~~-~~~f~sl~~Lv~~y~   88 (613)
T 2ozo_A           15 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD-----VRFHHFPIERQLNGTYAIAG-GKAHCGPAELCEFYS   88 (613)
T ss_dssp             CCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEET-----TEEEEEEEEECTTSCEEETT-SCCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEEC-----CeEEEEEEEECCCCcEEECC-CCCcCCHHHHHHHHh
Confidence            799999999954  5789999999999999999999995     89999999987665 77766 778999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .++++++|+|+.|+..|
T Consensus        89 ~~~~~l~~~L~~p~~~~  105 (613)
T 2ozo_A           89 RDPDGLPCNLRKPCNRP  105 (613)
T ss_dssp             SCCTTSSSCCCSBCCCC
T ss_pred             hCCCCCCccCCccCCCC
Confidence            99999999999998765

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.89  E-value=2.2e-23  Score=129.48  Aligned_cols=88  Identities=19%  Similarity=0.189  Sum_probs=75.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEeccc---CCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT---KEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~---~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...++|+||||+|++..+.|+||++..     +.++||+|...+++|.+.+..   ..|+||.+||+||+
T Consensus        41 isR~eAE~lL~~~~dGtFLVR~S~~~~~~lsLSvr~~-----~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV~hY~  115 (187)
T 2izv_A           41 MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRY-----SRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYK  115 (187)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEET-----TEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTC
T ss_pred             CCHHHHHHHhcCCCCCcEEEEECCCCCceEEEEEeeC-----CeEEEEEEEECCCEEEEeccCCCccccCCHHHHHHHHH
Confidence            7999999999888999999999998777899999984     899999999987668887522   37999999999999


Q ss_pred             hCCCCcc--eeecCCCCC
Q psy3300          78 VMPELLP--CTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~--~~L~~p~~~   93 (97)
                      .+++++.  +.|+.|...
T Consensus       116 ~~~~~~~~~~~L~~Pv~r  133 (187)
T 2izv_A          116 DPSACMFFEPLLSTPLIR  133 (187)
T ss_dssp             CGGGCCTTSCCCCEECCC
T ss_pred             hccccccccccccccccc
Confidence            9988874  788888644

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.89  E-value=2.9e-23  Score=140.12  Aligned_cols=89  Identities=26%  Similarity=0.281  Sum_probs=79.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCC-CCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~-~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++|+.+|...++|+||||+|++. +|.|+|||+..     +.++||+|...+++|++.+ ...|+||.+||+||+.+
T Consensus        17 IsR~eAE~lL~~~~dG~FLVR~S~s~~~g~y~LSvr~~-----~~v~H~rI~~~~g~y~l~~-~~~F~SL~eLV~~Y~~~   90 (373)
T 3hhm_B           17 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKG-----GNNKLIKIFHRDGKYGFSD-PLTFSSVVELINHYRNE   90 (373)
T ss_dssp             CCHHHHHHHTTTCCTTEEEEEECSCC--CCEEEEEEET-----TEEEEEEECCSSSCBCSSS-SCCBSSSHHHHHHHHHS
T ss_pred             CCHHHHHHHhcCCCCCCEEEeccCCCCCCCEEEEEEEC-----CeeEEEEEEecCCeEEeCC-CCCcCCHHHHHHHHhhC
Confidence            79999999998889999999999988 99999999995     8999999998766688865 67899999999999999


Q ss_pred             C-----CCcceeecCCCCCCC
Q psy3300          80 P-----ELLPCTLSLHRYNPN   95 (97)
Q Consensus        80 ~-----~~l~~~L~~p~~~p~   95 (97)
                      +     +++.++|..|+..|.
T Consensus        91 ~l~~~~~gl~~~L~~Pv~r~~  111 (373)
T 3hhm_B           91 SLAQYNPKLDVKLLYPVSKYQ  111 (373)
T ss_dssp             CGGGSCTTCCCCCCEECCSCC
T ss_pred             CccccCCCCCcccCCCCCCcc
Confidence            8     789999999987764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=1e-22  Score=145.04  Aligned_cols=88  Identities=31%  Similarity=0.393  Sum_probs=79.4

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++..     +.++||+|.+.++| |++.+ ...|.||.+||+||+
T Consensus        20 isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~-----~~v~h~~i~~~~~g~~~~~~-~~~f~sl~~Lv~~y~   93 (635)
T 4fl3_A           20 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHG-----RKAHHYTIERELNGTYAIAG-GRTHASPADLCHYHS   93 (635)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEET-----TEEEEEEEEECTTSCEESTT-CCCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEeC-----CEEEeEEEEEcCCCCEEeCC-CCccCCHHHHHHHHh
Confidence            799999999976  4799999999999999999999995     89999999988666 77765 778999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.++|+.|+..+
T Consensus        94 ~~~~~l~~~L~~p~~~~  110 (635)
T 4fl3_A           94 QESDGLVCLLKKPFNRP  110 (635)
T ss_dssp             TCCTTSSSCCCEECCCC
T ss_pred             hCCCCCeeccCCcCCCc
Confidence            99999999999998654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=2.6e-22  Score=142.95  Aligned_cols=87  Identities=24%  Similarity=0.325  Sum_probs=77.3

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...  ++|+||||+| +.+|.|+||++..     +.++||+|....+| |++.+ ...|.||.+||+||+
T Consensus       173 isr~~ae~~L~~~~~~~G~FLvR~s-~~~g~y~lsv~~~-----~~v~h~~i~~~~~g~~~~~~-~~~F~sl~~Lv~~y~  245 (635)
T 4fl3_A          173 ISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHE-----GKVLHYRIDKDKTGKLSIPE-GKKFDTLWQLVEHYS  245 (635)
T ss_dssp             CCHHHHHHHHHSSSCCTTCEEEEES-SSSSCEEEEEEET-----TEEEEEEEEECTTSCEESTT-CCCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHHcCCCCCceEEEEec-CCCCCEEEEEEEC-----CEEEEEEEEECCCCCEEeCC-CCccCCHHHHHHHhh
Confidence            7999999999864  6999999999 6789999999995     89999999887776 77665 679999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++||+|+|+.|+.++
T Consensus       246 ~~~~~l~~~L~~p~~~~  262 (635)
T 4fl3_A          246 YKADGLLRVLTVPCQKI  262 (635)
T ss_dssp             TCCTTSSSCCCSBCCC-
T ss_pred             hCCCCCccccCccCcCc
Confidence            99999999999998753

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.87  E-value=9.9e-22  Score=126.64  Aligned_cols=86  Identities=29%  Similarity=0.326  Sum_probs=71.4

Q ss_pred             CHHHHHHHhC------CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc----EEEecccCCCCCHHH
Q psy3300           2 IQEITLEVLS------QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSLTS   71 (97)
Q Consensus         2 sr~~ae~~L~------~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~----~~l~~~~~~F~sl~~   71 (97)
                      +|++||++|+      ..++|+||||+|++.+|.|+||++..     +.++||+|...+++    |++.+ ...|.||.+
T Consensus        17 sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~-----~~v~H~~I~~~~~~g~~~~~~~~-~~~F~sl~~   90 (246)
T 4fbn_A           17 GRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRN-----GKVQHCRIHSRQDAGTPKFFLTD-NLVFDSLYD   90 (246)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEEECGGGCCEEEEET-TEEESSHHH
T ss_pred             CHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEEC-----CEEEEEEEEEECCCCceeEEecC-CcccCCHHH
Confidence            7999999996      35899999999999999999999995     89999999887643    67765 778999999


Q ss_pred             HHHHhhhCCC---CcceeecCCCCC
Q psy3300          72 LITHHSVMPE---LLPCTLSLHRYN   93 (97)
Q Consensus        72 Lv~~y~~~~~---~l~~~L~~p~~~   93 (97)
                      ||+||+.++.   ++...|..|..+
T Consensus        91 LV~~y~~~~l~~~~~~~~l~~p~p~  115 (246)
T 4fbn_A           91 LITHYQQVPLRCNEFEMRLSEPVPQ  115 (246)
T ss_dssp             HHHHHHHSCEECSSCEECCCCBCCC
T ss_pred             HHHhHhhcccccccccccccccccc
Confidence            9999999753   455566655543

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.86  E-value=8.1e-23  Score=130.55  Aligned_cols=85  Identities=27%  Similarity=0.430  Sum_probs=73.2

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC-----------------c-EEEecc
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK-----------------G-YKIKGF   62 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~-----------------~-~~l~~~   62 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|...++                 + |.+ + 
T Consensus        20 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~-~-   92 (230)
T 2dvj_A           20 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSEN-----SRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI-G-   92 (230)
T ss_dssp             CCTTHHHHHHTTSSSSCBEEECCSSCTTSCEEECCCS-----SSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEES-S-
T ss_pred             CCHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEEeCCCCcccccccccccccccceEEEe-C-
Confidence            7899999999887999999999999999999999984     8999999987653                 3 444 4 


Q ss_pred             cCCCCCHHHHHHHhhhCCCCcceeecCCCCC
Q psy3300          63 TKEFSSLTSLITHHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        63 ~~~F~sl~~Lv~~y~~~~~~l~~~L~~p~~~   93 (97)
                      ...|.||.+||+||+.+.++ .+.|..|+..
T Consensus        93 ~~~F~sl~~LV~~y~~~~l~-~~~L~~Pv~~  122 (230)
T 2dvj_A           93 DQEFDSLPALLEFYKIHYLD-TTTLIEPVSR  122 (230)
T ss_dssp             SCEESSHHHHHTTSTTTCSS-SSCCCCBCCS
T ss_pred             CceeCCHHHHHHHHhhCccc-cccccccccc
Confidence            77899999999999998865 5788888654

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.86  E-value=1.3e-21  Score=120.27  Aligned_cols=85  Identities=27%  Similarity=0.518  Sum_probs=72.9

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCc---eeEEEEEE---eCC----c-EEEecccCCCC
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLG---IAHYLILR---TAK----G-YKIKGFTKEFS   67 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~---v~h~~I~~---~~~----~-~~l~~~~~~F~   67 (97)
                      |+|++||++|+.  .++|+||||+| +.+|.|+||++..     +.   ++||+|..   ..+    | |.+ + ...|+
T Consensus        19 isR~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~-----~~~~~v~H~~I~~~~~~~~g~~~~~~~~-~-~~~F~   90 (174)
T 3qwx_X           19 MSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREA-----DEGNAVCHYLIERGEPKEDGTAAAGVKI-A-NQSFP   90 (174)
T ss_dssp             CCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECC-----SSSSCEEEEEEEECCCCTTSSSCCCEEE-T-TEEES
T ss_pred             CCHHHHHHHHhccCCCCCeEEEEec-CCCCCEEEEEEEC-----CCCCceEEEEEEeccCCCCCcccceEEE-C-CeecC
Confidence            789999999987  36899999999 8999999999995     56   99999987   322    3 676 4 77899


Q ss_pred             CHHHHHHHhhhCCCCcceeecCCCCCC
Q psy3300          68 SLTSLITHHSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        68 sl~~Lv~~y~~~~~~l~~~L~~p~~~p   94 (97)
                      ||.+||+||+.++. +.++|..|+..|
T Consensus        91 sl~eLv~~y~~~~~-~~~~L~~P~~~p  116 (174)
T 3qwx_X           91 DIPALLNHFKMRVL-TEASLLAAYKKP  116 (174)
T ss_dssp             SHHHHHHHTTSSCS-SSCCCCEECCCC
T ss_pred             cHHHHhhhhhcCcc-cccccccccccc
Confidence            99999999999885 778899888776

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.86  E-value=1.1e-21  Score=126.49  Aligned_cols=84  Identities=25%  Similarity=0.356  Sum_probs=73.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||.+|... .+|+||||.| +.+|.|+||++..     +.++||+|...++.|.+ + ...|+||.+||+||+.+
T Consensus       129 isr~~Ae~lL~~~~~~G~FLVR~s-~~~g~y~Lsv~~~-----~~v~H~~I~~~~~~~~~-~-~~~F~sL~~Lv~~y~~~  200 (246)
T 4fbn_A          129 LTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAE-----GKIKHCRVQQEGQTVML-G-NSEFDSLVDLISYYEKH  200 (246)
T ss_dssp             CCHHHHHHHHHTSCCTTEEEEEEC-SSTTEEEEEEEET-----TEEEEEEEEEETTEEEE-T-TEEESCHHHHHHHHHHS
T ss_pred             ccHHHHHHHHhhCCCCCeEEEEec-CCCCCEEEEEEeC-----CCeEEEEEEeCCCEEEe-C-CCccCCHHHHHHHhCcC
Confidence            7899999999776 5899999998 5689999999995     89999999876544544 4 66799999999999999


Q ss_pred             CCCcceeecCCCC
Q psy3300          80 PELLPCTLSLHRY   92 (97)
Q Consensus        80 ~~~l~~~L~~p~~   92 (97)
                      +.++.+.|+.|+.
T Consensus       201 p~~~~~~L~~Pv~  213 (246)
T 4fbn_A          201 PLYRKMKLRYPIN  213 (246)
T ss_dssp             CSBTTBCCCEECS
T ss_pred             CCCCCcCCCCcCC
Confidence            9999999999863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.86  E-value=2.3e-21  Score=137.59  Aligned_cols=86  Identities=27%  Similarity=0.340  Sum_probs=77.0

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||.+|..  .++|+||||+| +.+|.|+||++..     +.++||+|.+..+| |++.+ ...|+||.+||+||+
T Consensus       168 i~r~~ae~~L~~~~~~~G~FLvR~s-~~~~~~~lsv~~~-----~~v~h~~I~~~~~g~~~~~~-~~~F~sl~~Lv~~y~  240 (613)
T 2ozo_A          168 LTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYG-----KTVYHYLISQDKAGKYCIPE-GTKFDTLWQLVEYLK  240 (613)
T ss_dssp             CCHHHHHHHHSSSCCCTTCEEEEEC-SSTTEEEEEEEET-----TEEEEEEEEECTTCCEECTT-SCEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCceEEEEec-CCCCCEEEEEEEC-----CeEEEEEEEECCCCCEEECC-CCCcCCHHHHHHHHh
Confidence            789999999985  47999999999 7789999999985     89999999987666 77764 778999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .++++++++|..|+.+
T Consensus       241 ~~~~~l~~~L~~pC~~  256 (613)
T 2ozo_A          241 LKADGLIYCLKEACPN  256 (613)
T ss_dssp             HCCTTCSSCCCSBCCC
T ss_pred             hCCCCceecccccccc
Confidence            9999999999999865

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.86  E-value=2.4e-22  Score=132.78  Aligned_cols=86  Identities=27%  Similarity=0.429  Sum_probs=73.7

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEe-----------------CCc-EEEecc
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRT-----------------AKG-YKIKGF   62 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~-----------------~~~-~~l~~~   62 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|.+.                 .++ |.+ + 
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-   90 (304)
T 2eyz_A           18 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSEN-----SRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI-G-   90 (304)
T ss_dssp             CCSSHHHHTTTTCCSSCEECCSCCSSSSCCEEEECSS-----SSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCCB-T-
T ss_pred             CCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEEC-----CEEEEEEEeeccccccccccccccccccCCCeEEe-C-
Confidence            7899999999877999999999999999999999984     89999999882                 345 444 4 


Q ss_pred             cCCCCCHHHHHHHhhhCCCCcceeecCCCCCC
Q psy3300          63 TKEFSSLTSLITHHSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        63 ~~~F~sl~~Lv~~y~~~~~~l~~~L~~p~~~p   94 (97)
                      ...|.||.+||+||+.+.++ .++|..|+..+
T Consensus        91 ~~~F~sl~~LV~~y~~~~l~-~~~L~~P~~~~  121 (304)
T 2eyz_A           91 DQEFDSLPALLEFYKIHYLD-TTTLIEPVSRS  121 (304)
T ss_dssp             TBCCSCHHHHHTTTTTSCCS-SSSSCCBCCSC
T ss_pred             CcEECCHHHHHHHhhhCccc-cceeccccccc
Confidence            67899999999999999875 67888887543

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.75  E-value=8e-23  Score=135.05  Aligned_cols=86  Identities=26%  Similarity=0.337  Sum_probs=75.8

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++||+|.+..+| |.+.  ...|.||.+||+||+.+
T Consensus        19 isR~~Ae~lL~~~~~G~FLvR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~--~~~F~sl~~Lv~~y~~~   91 (303)
T 2lqn_A           19 VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSEN-----SRVSHYIINSLPNRRFKIG--DQEFDHLPALLEFYKIH   91 (303)
Confidence            7899999999988999999999999999999999985     89999999986666 6664  57899999999999998


Q ss_pred             CCCcceeecCCCCCC
Q psy3300          80 PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~~l~~~L~~p~~~p   94 (97)
                      .+ +.++|+.|+..|
T Consensus        92 ~~-~~~~L~~P~~r~  105 (303)
T 2lqn_A           92 YL-DTTTLIEPAPRY  105 (303)
Confidence            87 578898887653

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.84  E-value=6.1e-21  Score=133.80  Aligned_cols=87  Identities=23%  Similarity=0.270  Sum_probs=75.8

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|... ++|+||||+|++.+|.|+||++..     +.++||+|...++.|.+.+ ...|+||.+||+||+.+
T Consensus         9 i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~Lv~~y~~~   82 (532)
T 2b3o_A            9 LSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVG-----DQVTHIRIQNSGDFYDLYG-GEKFATLTELVEYYTQQ   82 (532)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEET-----TEEEEEEEECSSSCEEETT-SCEESCHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEEC-----CEEEEEEEEecCCEEEECC-CcccCCHHHHHHHHHhc
Confidence            7899999999865 899999999999999999999994     8999999986544477765 67899999999999988


Q ss_pred             C------CCcceeecCCCCC
Q psy3300          80 P------ELLPCTLSLHRYN   93 (97)
Q Consensus        80 ~------~~l~~~L~~p~~~   93 (97)
                      +      +|+.+.|+.|+..
T Consensus        83 ~~~l~~~~g~~~~L~~P~~~  102 (532)
T 2b3o_A           83 QGVLQDRDGTIIHLKYPLNC  102 (532)
T ss_dssp             CSCBCCSSSCCBCCCEECCC
T ss_pred             ccccccccCchhhccccccc
Confidence            6      7888999988644

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.82  E-value=3.2e-20  Score=131.59  Aligned_cols=87  Identities=23%  Similarity=0.270  Sum_probs=75.8

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|... ++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.+
T Consensus         9 isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~eLv~~y~~~   82 (595)
T 3ps5_A            9 LSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVG-----DQVTHIRIQNSGDFYDLYG-GEKFATLTELVEYYTQQ   82 (595)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEET-----TEEEEEEEEECSSCEESSS-SCCBSSHHHHHHHHHTT
T ss_pred             CCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEEC-----CEEEEEEEEeCCCcEEEec-CccccchhhhhhhhccC
Confidence            7899999999765 799999999999999999999995     8999999987666688876 77899999999999996


Q ss_pred             C------CCcceeecCCCCC
Q psy3300          80 P------ELLPCTLSLHRYN   93 (97)
Q Consensus        80 ~------~~l~~~L~~p~~~   93 (97)
                      +      +++.++|..|...
T Consensus        83 ~~~l~~~~g~~i~L~~P~~~  102 (595)
T 3ps5_A           83 QGVLQDRDGTIIHLKYPLNC  102 (595)
T ss_dssp             SSCCBCSSCCBCCCCCBCCC
T ss_pred             cccccccccccccccccccc
Confidence            4      4677888887643

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.82  E-value=2.6e-20  Score=130.47  Aligned_cols=88  Identities=22%  Similarity=0.242  Sum_probs=75.4

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|.+. ++|+||||+|++.+|.|+||++..     +.++||+|...+++|.+.+ ...|+||.+||+||+.+
T Consensus        11 i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~-----~~v~H~~I~~~~~~~~l~~-~~~F~sl~eLv~~y~~~   84 (525)
T 2shp_A           11 ITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRN-----GAVTHIKIQNTGDYYDLYG-GEKFATLAELVQYYMEH   84 (525)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEECSSSCEEETT-SCEESSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEEC-----CEEEEEEEEecCCeEEECC-CCeECCHHHHHHHHHhC
Confidence            7899999999764 799999999999999999999985     8999999987666688876 77899999999999988


Q ss_pred             CC------CcceeecCCCCCC
Q psy3300          80 PE------LLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~------~l~~~L~~p~~~p   94 (97)
                      +.      |+.+.|+.|...+
T Consensus        85 ~~~l~~~~g~~i~L~~Pv~~~  105 (525)
T 2shp_A           85 HGQLKEKNGDVIELKYPLNCA  105 (525)
T ss_dssp             TTCSBSSSSCBCCCCEECCCC
T ss_pred             Ccccccccccccccccccccc
Confidence            74      4567888876443

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.82  E-value=8.5e-20  Score=120.75  Aligned_cols=85  Identities=28%  Similarity=0.526  Sum_probs=72.7

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCc---eeEEEEEE-eCC------c-EEEecccCCCC
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLG---IAHYLILR-TAK------G-YKIKGFTKEFS   67 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~---v~h~~I~~-~~~------~-~~l~~~~~~F~   67 (97)
                      |+|++||++|..  .++|+||||+| +.+|.|+||++..     +.   |+||+|.. ..+      | |++.  ...|.
T Consensus        48 i~R~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~-----~~~~~v~H~~I~~~~~~~~g~~~g~~~~~--~~~F~  119 (308)
T 3qwy_A           48 MSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREA-----DEGNAVCHYLIERGEPKEDGTAAAGVKIA--NQSFP  119 (308)
T ss_dssp             CCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECC-----SSSSCEEEEEEEECCCCTTTTCCCCEEET--TEEES
T ss_pred             CCHHHHHHHHhccCCCCceEEEEcc-CCCCCEEEEEEeC-----CCCCceEEEEEeeccCCCcCcccceEEEe--CeeeC
Confidence            799999999976  47899999999 8999999999995     56   99999987 432      5 7774  57899


Q ss_pred             CHHHHHHHhhhCCCCcceeecCCCCCC
Q psy3300          68 SLTSLITHHSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        68 sl~~Lv~~y~~~~~~l~~~L~~p~~~p   94 (97)
                      +|.+||+||+.+.. ..++|..|..+|
T Consensus       120 Sl~eLv~~y~~~~~-~~~~L~~P~~~p  145 (308)
T 3qwy_A          120 DIPALLNHFKMRVL-TEASLLAAYKKP  145 (308)
T ss_dssp             SHHHHHHHHHHSCS-SSCCCCEECCCC
T ss_pred             CHHHHHHHHhhccc-ccchhccccccc
Confidence            99999999999887 577888887665

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.81  E-value=2.4e-20  Score=132.26  Aligned_cols=92  Identities=26%  Similarity=0.336  Sum_probs=76.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCC----CceeEEEEEEeCCcEEEecccCCCCCHHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHH----LGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH   75 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~----~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~   75 (97)
                      |+|++||.+|... .+|+||||+|++.+|.|+||++...+..+    ..++||+|...+++|++.+ ...|+||.+||+|
T Consensus       115 ~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~  193 (595)
T 3ps5_A          115 MSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGG-LETFDSLTDLVEH  193 (595)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSS-SCCBSSHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcC-CcCCCCHHHHHHH
Confidence            6899999999654 68999999999999999999999621111    1899999987666688875 7789999999999


Q ss_pred             hhhC----CCCcceeecCCCCC
Q psy3300          76 HSVM----PELLPCTLSLHRYN   93 (97)
Q Consensus        76 y~~~----~~~l~~~L~~p~~~   93 (97)
                      |+.+    .+|+.+.|+.|+.+
T Consensus       194 y~~~~l~~~~g~~~~L~~p~~~  215 (595)
T 3ps5_A          194 FKKTGIEEASGAFVYLRQPYYA  215 (595)
T ss_dssp             HHHSCBCCTTSCCBCCCEECCC
T ss_pred             HhcCCccccCCcEEEeeccccc
Confidence            9984    56788999988754

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=1.3e-19  Score=106.29  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=61.8

Q ss_pred             CceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCCCCc--ceeecCCCC
Q psy3300          15 VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELL--PCTLSLHRY   92 (97)
Q Consensus        15 ~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~~~l--~~~L~~p~~   92 (97)
                      +|+||||+|+ .+|.|+|||+...   ++.|+||+|...+++|++.+ ...|+||.+||+||+.+++..  .+.|+.|..
T Consensus        44 dG~FLVR~S~-~~g~y~LSv~~~~---~~~vkH~rI~~~~~~~~i~~-~~~F~sL~eLV~hY~~~~l~~~~~~~L~~P~~  118 (126)
T 2cr4_A           44 DGLYCIRNSS-TKSGKVLVVWDET---SNKVRNYRIFEKDSKFYLEG-EVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYG  118 (126)
T ss_dssp             TTCEEEEECS-STTCEEEEEEETT---TTEECCEECEEETTEEESSS-SCEESSHHHHHHHHTTSCCSSSSSCCCCSBSS
T ss_pred             CCeEEEEecC-CCCCEEEEEEeCC---CCCEEEEEEEECCCeEEEcC-CccCCCHHHHHHHHhhCCcCCCCCEEeCCcCC
Confidence            5999999999 8999999999831   27899999998877788765 678999999999999987643  467888864


Q ss_pred             C
Q psy3300          93 N   93 (97)
Q Consensus        93 ~   93 (97)
                      .
T Consensus       119 ~  119 (126)
T 2cr4_A          119 Y  119 (126)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.79  E-value=3.4e-19  Score=124.80  Aligned_cols=93  Identities=27%  Similarity=0.380  Sum_probs=77.8

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC-----CCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE-----FHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~-----~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||.+|... ++|+||||+|++.+|.|+||++....     .....++||+|...+++|++.+ ...|.||.+||+
T Consensus       117 ~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~-~~~F~sL~eLV~  195 (525)
T 2shp_A          117 LSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGG-GERFDSLTDLVE  195 (525)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSS-SCCBSSHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECC-CceeCcHHHHHH
Confidence            6899999999866 89999999999999999999998621     1123899999998866688765 678999999999


Q ss_pred             HhhhCC----CCcceeecCCCCCC
Q psy3300          75 HHSVMP----ELLPCTLSLHRYNP   94 (97)
Q Consensus        75 ~y~~~~----~~l~~~L~~p~~~p   94 (97)
                      ||+.++    .|+.+.|+.|+.++
T Consensus       196 ~y~~~~l~~~~g~~~~L~~P~~~t  219 (525)
T 2shp_A          196 HYKKNPMVETLGTVLQLKQPLNTT  219 (525)
T ss_dssp             HHHHSCCBCTTSCBCCCCEECCCS
T ss_pred             hhhccCccccCCeEEEeecccccc
Confidence            999986    47789999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.78  E-value=1.1e-18  Score=119.79  Aligned_cols=91  Identities=27%  Similarity=0.383  Sum_probs=76.0

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|+..  ++|+||||.|++.+|.|+|||+......++.++||+|....+| |++.. ...|.||.+||+||+
T Consensus        72 ~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~-~~~F~Sl~~Li~~y~  150 (452)
T 1fmk_A           72 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITS-RTQFNSLQQLVAYYS  150 (452)
T ss_dssp             CCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESST-TSEESSHHHHHHHHT
T ss_pred             ccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEec-CcccCCHHHHHHHhh
Confidence            6899999999865  6799999999999999999999732222468999999987665 77764 678999999999999


Q ss_pred             hCCCCcceeecCCCC
Q psy3300          78 VMPELLPCTLSLHRY   92 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~   92 (97)
                      ...+++.+.|..|+.
T Consensus       151 ~~~~~l~~~l~~~~~  165 (452)
T 1fmk_A          151 KHADGLCHRLTTVCP  165 (452)
T ss_dssp             TCCTTSSSCCCEECC
T ss_pred             hccccchhhcccccc
Confidence            999999877776653

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.76  E-value=2.5e-18  Score=119.28  Aligned_cols=86  Identities=30%  Similarity=0.428  Sum_probs=76.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++|+.+|+..++|+||||+|++.+|.|+||++..     +.++||+|...++| +++.. ...|+++.+||+||...
T Consensus       112 i~r~~ae~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~-----~~v~h~~I~~~~~g~~~~~~-~~~F~sl~eLv~~~~~~  185 (495)
T 1opk_A          112 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYE-----GRVYHYRINTASDGKLYVSS-ESRFNTLAELVHHHSTV  185 (495)
T ss_dssp             CCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEECEECTTSCEESST-TSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHhhCCCCceEEEEeCCCCCCceEEEEeeC-----CeEEEEEEEecCCCceEecc-CccchhHHHHhhhhccc
Confidence            7899999999877899999999999999999999985     89999999987766 55544 77899999999999999


Q ss_pred             CCCcceeecCCCC
Q psy3300          80 PELLPCTLSLHRY   92 (97)
Q Consensus        80 ~~~l~~~L~~p~~   92 (97)
                      .+++.+.|..|+.
T Consensus       186 ~~g~~~~l~~~~~  198 (495)
T 1opk_A          186 ADGLITTLHYPAP  198 (495)
T ss_dssp             CTTSSSCCCEECC
T ss_pred             ccccchhcccccc
Confidence            9999988877653

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.76  E-value=8.1e-19  Score=123.06  Aligned_cols=93  Identities=26%  Similarity=0.330  Sum_probs=76.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC----CCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE----FHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH   75 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~----~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~   75 (97)
                      |+|++||.+|... ++|+||||+|++.+|.|+||++....    .....++||+|...+++|.+.. ...|.+|.+||+|
T Consensus       115 i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~g~~~l~~-~~~F~sl~eLV~~  193 (532)
T 2b3o_A          115 MSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGG-LETFDSLTDLVEH  193 (532)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCCTTSBBSSS-SCCBSSHHHHHHH
T ss_pred             cchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEcCCceeeCC-CcccCcHHHHHhh
Confidence            6899999999753 78999999999999999999998520    0112899999988766688754 7789999999999


Q ss_pred             hhhC----CCCcceeecCCCCCC
Q psy3300          76 HSVM----PELLPCTLSLHRYNP   94 (97)
Q Consensus        76 y~~~----~~~l~~~L~~p~~~p   94 (97)
                      |+.+    ..|+.+.|+.|+.++
T Consensus       194 y~~~~l~~~~g~~~~L~~P~~~t  216 (532)
T 2b3o_A          194 FKKTGIEEASGAFVYLRQPYYAT  216 (532)
T ss_dssp             HHHHCEECSSSCEECCCEECCCC
T ss_pred             ccccCccccCCeeEecccccccc
Confidence            9886    467889999887654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.75  E-value=3.8e-18  Score=119.37  Aligned_cols=90  Identities=28%  Similarity=0.399  Sum_probs=75.1

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|+..  ++|+||||.|++.+|.|+|+|+......+..++||+|...++| |++.. ...|.||.+||+||+
T Consensus       155 i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~-~~~F~SL~eLv~~y~  233 (535)
T 2h8h_A          155 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITS-RTQFNSLQQLVAYYS  233 (535)
T ss_dssp             CCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEET-TEEESSHHHHHHHHH
T ss_pred             cCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeec-cccccChHHhheeec
Confidence            7899999999865  6799999999999999999999732223468999999986655 88765 678999999999999


Q ss_pred             hCCCCcceeecCCC
Q psy3300          78 VMPELLPCTLSLHR   91 (97)
Q Consensus        78 ~~~~~l~~~L~~p~   91 (97)
                      .+.+++.+.|..++
T Consensus       234 ~~~~~~~~~l~~~~  247 (535)
T 2h8h_A          234 KHADGLCHRLTTVC  247 (535)
T ss_dssp             HCCTTSSSCCCEEC
T ss_pred             cccCcccccccccc
Confidence            99999987777654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.74  E-value=1.8e-17  Score=113.82  Aligned_cols=86  Identities=27%  Similarity=0.361  Sum_probs=76.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+++|+..++|+||||+|++.+|.|+|+++..     +.++||+|....++|++.. ...|.++.+||+||....
T Consensus        87 i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~-----~~v~H~~I~~~~~~~~i~~-~~~F~sl~eLv~~y~~~~  160 (450)
T 1k9a_A           87 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCE-----GKVEHYRIMYHASKLSIDE-EVYFENLMQLVEHYTTDA  160 (450)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECS-----SSEEEEEEEEETTEEESSS-SSCBSSHHHHHHHHHHCC
T ss_pred             cCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeC-----CeeeEEEEEecCCceEecc-ccccccHHHHHhhhcccc
Confidence            7899999999877889999999999999999999884     7999999977777788875 778999999999999999


Q ss_pred             CCcceeecCCCC
Q psy3300          81 ELLPCTLSLHRY   92 (97)
Q Consensus        81 ~~l~~~L~~p~~   92 (97)
                      +++.+.|..|..
T Consensus       161 ~~~~~~l~~~~~  172 (450)
T 1k9a_A          161 DGLCTRLIKPKV  172 (450)
T ss_dssp             TTSSSCCCEECC
T ss_pred             cchhhhcccccc
Confidence            999888877653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.73  E-value=2.5e-17  Score=113.06  Aligned_cols=90  Identities=27%  Similarity=0.340  Sum_probs=75.7

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|..  .++|+||||+|++.+|.|+||++......++.++||+|...++| |++.. ...|.++.+|+++|.
T Consensus        77 i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~-~~~F~sl~eLv~~y~  155 (454)
T 1qcf_A           77 ISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISP-RSTFSTLQELVDHYK  155 (454)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSS-SSCBSSHHHHHHHHT
T ss_pred             cchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeC-ccccCCHHHHHHHHH
Confidence            789999999964  48999999999999999999999743323478999999987665 77654 678999999999999


Q ss_pred             hCCCCcceeecCCC
Q psy3300          78 VMPELLPCTLSLHR   91 (97)
Q Consensus        78 ~~~~~l~~~L~~p~   91 (97)
                      ...+++...+..|+
T Consensus       156 ~~~~~l~~~~~~~~  169 (454)
T 1qcf_A          156 KGNDGLCQKLSVPC  169 (454)
T ss_dssp             SSCTTSSSCCCSBC
T ss_pred             hccCCccccccccc
Confidence            99999988777765

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.69  E-value=1e-16  Score=110.94  Aligned_cols=71  Identities=23%  Similarity=0.366  Sum_probs=61.7

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHH-----H
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLIT-----H   75 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~-----~   75 (97)
                      |+|++||.+|.. ++|+||||+|++.+|.|+||++..     +.++||+|.. +++|++.  ...|+||.+||+     +
T Consensus        58 i~r~~ae~lL~~-~~G~FLvR~S~~~~g~~~Lsv~~~-----~~v~H~~I~~-~g~~~~~--~~~F~sl~~Lv~dGl~~~  128 (463)
T 3cxl_A           58 ISREAADQLLIV-AEGSYLIRESQRQPGTYTLALRFG-----SQTRNFRLYY-DGKHFVG--EKRFESIHDLVTDGLITL  128 (463)
T ss_dssp             CCHHHHHHHHTT-STTEEEEEECSSSTTCEEEEEECS-----SSEEEEECEE-SSSEESS--SCCBSCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHcC-CCCeEEEeccCCCCCCEEEEEEEC-----CEEEEEEEec-CCeEEEC--CCccCCHHHHHHHHHHhh
Confidence            789999999964 689999999999999999999995     8999999987 5557764  678999999999     8


Q ss_pred             hhhCC
Q psy3300          76 HSVMP   80 (97)
Q Consensus        76 y~~~~   80 (97)
                      |....
T Consensus       129 ~~~~~  133 (463)
T 3cxl_A          129 YIETK  133 (463)
T ss_dssp             HHHHH
T ss_pred             hccCC
Confidence            87553

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.67  E-value=5.5e-16  Score=97.78  Aligned_cols=76  Identities=33%  Similarity=0.519  Sum_probs=66.0

Q ss_pred             CCHHHHHHHhC-CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLS-QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~-~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++|+.+|. ..++|+||||.|++.+|.|+||++..     +.++||+|....+| |++.  ...|+|+.+||+||+.
T Consensus        65 isr~~ae~lL~~~~~~G~fLvR~S~~~~g~~~LSv~~~-----~~v~h~~I~~~~~g~~~~~--~~~f~sl~eLv~~~~~  137 (217)
T 1gri_A           65 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG-----NDVQHFKVLRDGAGKYFLW--VVKFNSLNELVDYHRS  137 (217)
T ss_dssp             CCHHHHHHHHHTCSSTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECSSSCEESS--SCEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEccCCCCCCEEEEEEEC-----CEEEEEEEEEcCCCCEEEe--eeEcCCHHHHHHhhhc
Confidence            68999999994 45899999999999999999999984     89999999988777 6553  6789999999999998


Q ss_pred             CCCCc
Q psy3300          79 MPELL   83 (97)
Q Consensus        79 ~~~~l   83 (97)
                      ++.+.
T Consensus       138 ~~~~~  142 (217)
T 1gri_A          138 TSVSR  142 (217)
T ss_dssp             SCSSS
T ss_pred             ccccc
Confidence            86543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.61  E-value=5.9e-16  Score=104.00  Aligned_cols=73  Identities=27%  Similarity=0.344  Sum_probs=51.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+++|+  ++|+||||+|++.+ .|+||++..     +.++||+|...++.|.+.  ...|+++.+||+||+.++
T Consensus        20 i~r~~a~~lL~--~~G~flvR~s~~~~-~~~lsv~~~-----~~~~h~~i~~~~~~~~~~--~~~F~sl~~LI~~y~~~~   89 (377)
T 3cbl_A           20 IPRAEVAELLV--HSGDFLVRESQGKQ-EYVLSVLWD-----GLPRHFIIQSLDNLYRLE--GEGFPSIPLLIDHLLSTQ   89 (377)
T ss_dssp             CCHHHHHHHCC--STTEEEEEECC--C-CEEEEC----------CCEEEC----CCCCC------CCSHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHh--cCCCEEEEEeCCCC-cEEEEEEEC-----CCccchhhccccceEEec--ceeccchHHHHHHHhhcc
Confidence            78999999997  58999999998877 899999985     799999998776555554  567999999999999876


Q ss_pred             CCc
Q psy3300          81 ELL   83 (97)
Q Consensus        81 ~~l   83 (97)
                      ..+
T Consensus        90 ~~l   92 (377)
T 3cbl_A           90 QPL   92 (377)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            654

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.58  E-value=1.3e-16  Score=107.73  Aligned_cols=66  Identities=35%  Similarity=0.494  Sum_probs=0.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSL   72 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~L   72 (97)
                      |+|.+|+.+|...++|+||||.| +.+|.|+||++..     +.|+||+|...++|+++.+....|+||.+|
T Consensus       308 isR~~AE~LL~~~~~G~FLVR~S-s~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~~~~~~~F~SL~eL  373 (373)
T 3hhm_B          308 SNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVD-----GEVKHCVINKTATGYGFAEPYNLYSSLKEL  373 (373)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             CCHHHHHHHhccCCCCcEEEEec-CCCCCEEEEEEEC-----CeEEEEEEEEcCCCcEEeCCCCCCCChhhC
Confidence            78999999998889999999999 8899999999995     899999999888785544435789999886

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.51  E-value=6.1e-14  Score=86.32  Aligned_cols=70  Identities=16%  Similarity=0.249  Sum_probs=59.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      ++..+||++|+.. +|.||||+|++ ++.++|+++..    .+.++|+.|...+.-+.+.  +..|++|.|||.+|..
T Consensus        20 ~s~~qAe~~L~~~-~G~~liRPSsk-~~~ltit~Kv~----d~~~~Hi~I~E~~k~l~ig--~~~fedLDElI~~yv~   89 (178)
T 2xp1_A           20 FNVTESENYLRSS-TDDFLIRKGSR-HGYCVLVIKFA----SDVFVHMKIEEHSEHYTCS--NKHFEDIDEVISVYVR   89 (178)
T ss_dssp             CCHHHHHHHHHHS-SCCEEEEECSS-TTEEEEEEEEE----TTEEEEEEEEECSSCEEET--TEEESSHHHHHHHTHH
T ss_pred             CCHHHHHHHHhcC-CCCEEEeecCC-CCcEEEEEEEC----CCcEEEEEEEECCCEEEEC--CcEECCHHHHHHHHHH
Confidence            5789999999885 59999999986 88899999975    4788999998766557664  4589999999999976

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=98.72  E-value=2.6e-08  Score=68.86  Aligned_cols=69  Identities=22%  Similarity=0.371  Sum_probs=54.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++|+++|..+++|+||||-|++..|.++++++...  ..+.++|+.|.....       ...-.||.|.|.-|..
T Consensus       358 Isk~ea~~lL~~~~~GTFLLRFSeS~~GgitIsyV~~d--~~~~~kh~~v~p~t~-------~ls~~SL~D~I~d~~q  426 (473)
T 1uur_A          358 MGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVE--MPARIKHYLVQPNDT-------AAAKKTFPDFLSEHSQ  426 (473)
T ss_dssp             CCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSS--SSCCEEEEECCGGGS-------BTTTBCHHHHHTTCTT
T ss_pred             ecHHHHHHHhhCCCCCeEEEEeccCCCceEEEEEEeec--CCCceeEEEecCCcc-------ccccCCHHHHHhccHH
Confidence            78999999999999999999999999999999998742  136889998864322       1234688888887644

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=98.50  E-value=3.9e-07  Score=56.01  Aligned_cols=68  Identities=15%  Similarity=0.094  Sum_probs=53.2

Q ss_pred             CHHHHHHHhCCCCCce--EEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           2 IQEITLEVLSQEPVGA--FMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         2 sr~~ae~~L~~~~~G~--fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      ++++++++|....++.  |.++.|...||.|+|++..      +.++|-.|.-. .||.+ + ...|+||.+||+||++
T Consensus       107 s~~~~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~~------~~~~~e~i~V~-~g~~~-~-~~~f~sl~~L~~~fK~  176 (178)
T 2xp1_A          107 SPEDAEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYNN------GSILEEYIGVS-DMLTY-N-NSTFKDIDSFVAYRKR  176 (178)
T ss_dssp             CTTTSHHHHHTCCSSSCEEEEEECSSSTTEEEEEEES------SSEEEEEEEES-SSEEE-T-TEEESSHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCCceEEEEecCCCCCeEEEEEcC------CCCceeeEEEc-cCCEE-c-CcCCcCHHHHHHHHhh
Confidence            4578899987654443  9999999999999999863      56776666656 57776 4 7889999999999975

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=98.29  E-value=1.7e-06  Score=62.36  Aligned_cols=71  Identities=14%  Similarity=0.178  Sum_probs=51.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCC-CCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTT-KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~-~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |++++|+.+|++.++|+||+|-|++ ..|..+++++..++. ++.+.++.|..    |.. . .-.=.||+|.|..|..
T Consensus       582 IsK~~a~~lL~~~~~GTFLLRFSdS~~~Ggitia~V~~~~~-~~~~~v~~v~P----~t~-k-dl~~~sl~d~i~d~~~  653 (683)
T 1yvl_A          582 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQN-GGEPDFHAVEP----YTK-K-ELSAVTFPDIIRNYKV  653 (683)
T ss_dssp             CCHHHHHHHHSSSCSSCEEEEECSSCSSCEEEEEEEECCC----CCEEEEBCC----EEH-H-HHTTSCHHHHHHHCCE
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCceEEEEEeccCC-CccceEEecCC----Cch-H-hhhhCCHHHHhhchhh
Confidence            6899999999999999999999999 999999999885431 12444554432    111 1 1223688999999864

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=98.17  E-value=2.1e-06  Score=60.71  Aligned_cols=71  Identities=14%  Similarity=0.152  Sum_probs=49.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCC-CCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTT-KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~-~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |++++|+.+|+..++|+||+|-|++ ..|..+++++..++.+ +.+.++.+..-    ...  .-.=.||+|.|..|..
T Consensus       447 IsK~~a~~lL~~~~~GTFLLRFSdS~~~GgITia~V~~~~~~-~~~~v~~v~P~----T~k--dl~~~sL~d~i~d~~~  518 (575)
T 1bf5_A          447 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNG-GEPDFHAVEPY----TKK--ELSAVTFPDIIRNYKV  518 (575)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSS-SCCCCEECCCB----CHH--HHHSSCHHHHHHTCCC
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCcEEEEEEecCCCC-ccceeEecCCC----chh--hhhhCCHHHHhhcchh
Confidence            6899999999999999999999999 9999999988754322 24434444321    100  1112478888888754

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=98.17  E-value=1.7e-06  Score=61.40  Aligned_cols=66  Identities=14%  Similarity=0.205  Sum_probs=47.6

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      |+|++|+.+|...++|+||||-|++..|.+++++....+  ...+.  .|......      .-.-.+|+|+|..|
T Consensus       471 isk~~a~~~L~~~~~GtFLlRFSds~~G~~tisyv~~~~--~~~v~--~v~P~t~k------dl~~~sL~d~I~d~  536 (585)
T 1y1u_A          471 VNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSP--DRNLW--NLKPFTTR------DFSIRSLADRLGDL  536 (585)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEEETTSTTEEEEEECCSSC--CSSCS--EEEEECHH------HHHHSCHHHHHHHC
T ss_pred             ccHHHHHHHHhCCCCCceEEEeccCCcCcEEEEEEecCC--CceeE--eecCCchh------hcccCCHHHHHhcc
Confidence            689999999999999999999999999999999988532  12333  34321110      11236788888876

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=98.09  E-value=7.9e-06  Score=53.86  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=34.2

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEec
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ||-.||.+.|..  ..+|+|++|-|.++.|+|+|+++..
T Consensus       250 lTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~  288 (329)
T 3bux_B          250 LTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTA  288 (329)
T ss_dssp             CCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECT
T ss_pred             eeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECC
Confidence            567899999998  6999999999999999999999986

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=97.96  E-value=1.8e-05  Score=51.96  Aligned_cols=37  Identities=22%  Similarity=0.375  Sum_probs=33.9

Q ss_pred             CCHHHHHHHhC--CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300           1 MIQEITLEVLS--QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus         1 isr~~ae~~L~--~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ||-.||.+.|.  .+.+|+||+|-|.++.|+|+|+++..
T Consensus       235 lTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s  273 (323)
T 3op0_A          235 LTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSS  273 (323)
T ss_dssp             CCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECT
T ss_pred             eeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcC
Confidence            57789999998  56899999999999999999999986

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=97.82  E-value=3.6e-06  Score=59.83  Aligned_cols=69  Identities=19%  Similarity=0.173  Sum_probs=49.7

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCC-CCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTT-KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~-~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+.+|...++|+||+|-|++ ..|.++++++..++  .+.+.|+.|..-    . .. ...-.||.|+|..|.
T Consensus       463 isk~~a~~lL~~~~~GTFLlRFSes~~~Ggitis~v~~~~--~g~~~~~~v~P~----t-~~-~l~~~sLad~I~d~~  532 (596)
T 1bg1_A          463 ISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDI--SGSTQIQSVEPY----T-KQ-QLNNMSFAEIIMGYK  532 (596)
T ss_dssp             CCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSS--CSSCCCCCCCCB----C-GG-GGTSSCHHHHTTSCC
T ss_pred             ecHHHHHHHHhCCCCCeeEEeecCCCCCCcEEEEEEecCC--CCceeEEecCCC----c-hh-hhccCCHHHHHHhhh
Confidence            6899999999999999999999998 89999998877532  234445555331    1 01 223458999997664

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=97.66  E-value=6.4e-06  Score=62.75  Aligned_cols=73  Identities=15%  Similarity=0.245  Sum_probs=0.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC------c--EEEecccCCCCCHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK------G--YKIKGFTKEFSSLTSL   72 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~------~--~~l~~~~~~F~sl~~L   72 (97)
                      ++-.+|+..|...+.|.++||+|+.-.+..+++++..    .+.+.|+-|...+.      |  +.+.  ...|.+|.||
T Consensus      1030 ~~~~qAe~~L~~~~~Gd~vIRPSSkG~dhLtvTwKv~----d~vyqHidV~E~~K~n~~slG~~L~I~--~~~y~DLDEl 1103 (1219)
T 3psi_A         1030 FNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLD----KDLFQHIDIQELEKENPLALGKVLIVD--NQKYNDLDQI 1103 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHhcCCCCCEEEeecCCCCCceEEEEEEc----CCcEEEEEEEecCCccccccCceEEEC--CceECCHHHH
Confidence            3567999999999999999999987677888999987    47889998886432      2  4443  4589999999


Q ss_pred             HHHhhhC
Q psy3300          73 ITHHSVM   79 (97)
Q Consensus        73 v~~y~~~   79 (97)
                      |.-|...
T Consensus      1104 i~r~V~p 1110 (1219)
T 3psi_A         1104 IVEYLQN 1110 (1219)
T ss_dssp             -------
T ss_pred             HHHHHHH
Confidence            9888554

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=95.24  E-value=0.0032  Score=48.40  Aligned_cols=74  Identities=12%  Similarity=0.248  Sum_probs=0.0

Q ss_pred             CHHHHHHHhCCC-----CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHh
Q psy3300           2 IQEITLEVLSQE-----PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHH   76 (97)
Q Consensus         2 sr~~ae~~L~~~-----~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y   76 (97)
                      ++++++..|...     .--.|.+.-+...||.|.|++..+.   ...++|.-|.-..+||.+.  ...|+++.+|+.|+
T Consensus      1128 ~~~eve~~L~~~k~~nP~ri~Y~f~~~~~~PG~F~L~f~~~~---~~~~~~~~v~v~p~Gf~~r--~~~f~~~~~L~~~F 1202 (1219)
T 3psi_A         1128 TKKDVVKFIEDYSRVNPNKSVYYFSLNHDNPGWFYLMFKINA---NSKLYTWNVKLTNTGYFLV--NYNYPSVIQLCNGF 1202 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CHHHHHHHHHHHHHhCCCcceEEEEeCCCCCCEEEEEEecCC---CCCceeeeEEEccCeEEEc--CccCcCHHHHHHHH
Confidence            467788888642     2245667777888999999998742   2568887777788898886  67899999999999


Q ss_pred             hhCC
Q psy3300          77 SVMP   80 (97)
Q Consensus        77 ~~~~   80 (97)
                      +.+-
T Consensus      1203 K~~~ 1206 (1219)
T 3psi_A         1203 KTLL 1206 (1219)
T ss_dssp             ----
T ss_pred             HHHh
Confidence            7763

>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.86  E-value=0.3  Score=26.66  Aligned_cols=41  Identities=12%  Similarity=0.142  Sum_probs=28.5

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEE
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR   52 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~   52 (97)
                      +..+|+|-|+-.....|.|.|+++.....-.+....+.+..
T Consensus        50 d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v~V~~   90 (95)
T 2ee9_A           50 DNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVNY   90 (95)
T ss_dssp             ECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEEEECC
T ss_pred             eCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEEEEec
Confidence            45689999999999999999999986432223444444443

>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=91.68  E-value=0.86  Score=25.33  Aligned_cols=27  Identities=22%  Similarity=0.287  Sum_probs=23.6

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|.|+-....+|.|.|.++...
T Consensus        60 d~~dGty~v~Y~p~~~G~y~I~V~~~g   86 (111)
T 2di8_A           60 DLEDGTCKVSYFPTVPGVYIVSTKFAD   86 (111)
T ss_dssp             BCTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            457899999999999999999999863

>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}

Probab=90.79  E-value=0.88  Score=25.54  Aligned_cols=28  Identities=18%  Similarity=0.328  Sum_probs=23.5

Q ss_pred             CCCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          11 SQEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        11 ~~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      .+..+|+|.|+-....+|.|.|.++...
T Consensus        66 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   93 (119)
T 2k9u_A           66 EDRKDGSCGVSYVVQEPGDYEVSIKFND   93 (119)
T ss_dssp             ECCSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred             EECCCCEEEEEEEECCCceEEEEEEECC
Confidence            3557899999998888999999999863

>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=90.70  E-value=0.67  Score=25.10  Aligned_cols=41  Identities=12%  Similarity=0.170  Sum_probs=29.1

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEE
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR   52 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~   52 (97)
                      +..+|+|-|.-.....|.|.|+++.....-.+....+.+..
T Consensus        42 d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~V~~   82 (93)
T 2d7n_A           42 DNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDA   82 (93)
T ss_dssp             ECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEEECB
T ss_pred             ECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEEEec
Confidence            45789999999999999999999986433233444555543

>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0

Probab=90.69  E-value=0.5  Score=25.76  Aligned_cols=25  Identities=12%  Similarity=0.312  Sum_probs=17.3

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +.+|+|.|+-.....|.|.|.++..
T Consensus        60 ~~dGty~V~Y~p~~~G~y~i~V~~~   84 (100)
T 3rgh_A           60 HGDGTHTITYIPLCPGAYTVTIKYG   84 (100)
T ss_dssp             CSSSEEEEEEECCSSEEEEEEEEET
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEEC
Confidence            4567777777766777777777664

>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.61  E-value=1.2  Score=24.71  Aligned_cols=28  Identities=18%  Similarity=0.265  Sum_probs=23.3

Q ss_pred             CCCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          11 SQEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        11 ~~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      .+..+|+|.|+-....+|.|.|.++...
T Consensus        69 ~d~~dGty~v~Y~p~~~G~y~I~V~~~g   96 (115)
T 2eea_A           69 IDNKDGTCTVTYLPTLPGDYSILVKYND   96 (115)
T ss_dssp             BCCSSSEEEEEEECSSCSCEEEEEEESS
T ss_pred             EECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            3457899999998888999999999863

>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A

Probab=90.08  E-value=0.61  Score=25.14  Aligned_cols=26  Identities=15%  Similarity=0.264  Sum_probs=21.2

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.++..
T Consensus        55 d~~dGty~v~Y~p~~~G~y~i~V~~~   80 (97)
T 2bp3_A           55 DNQDGTCSVSYLPVLPGDYSILVKYN   80 (97)
T ss_dssp             ECSSSEEEEEEECSSCEEEEEEEEET
T ss_pred             ECCCCEEEEEEEeCCCCcEEEEEEEC
Confidence            34678899988888888888888875

>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.99  E-value=1.1  Score=24.60  Aligned_cols=26  Identities=12%  Similarity=0.437  Sum_probs=22.5

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|+|+..
T Consensus        71 D~~dGty~v~y~p~~~G~y~i~V~~~   96 (113)
T 2ds4_A           71 DNKDGTYYISYTPKEPGVYTVWVCIK   96 (113)
T ss_dssp             CCSSSEEEEEEECSSSEEEEEEEEES
T ss_pred             ECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence            45789999999888899999999885

>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=89.78  E-value=0.94  Score=25.14  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=23.5

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|.|+-....+|.|.|.|+...
T Consensus        60 d~~dGty~V~Y~p~~~G~y~I~V~~~g   86 (111)
T 2d7o_A           60 DNKDGTCTVSYLPTAPGDYSIIVRFDD   86 (111)
T ss_dssp             CCSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred             ECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            457899999999999999999999863

>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A

Probab=89.71  E-value=0.61  Score=25.00  Aligned_cols=26  Identities=19%  Similarity=0.326  Sum_probs=21.0

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.|+..
T Consensus        52 d~~dGty~v~Y~p~~~G~y~I~V~~~   77 (94)
T 2w0p_A           52 DRKDGSCGVAYVVQEPGDYEVSVKFN   77 (94)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEEEEET
T ss_pred             ECCCCEEEEEEEECCCceEEEEEEEC
Confidence            44678888888888888888888875

>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=88.90  E-value=1.2  Score=24.53  Aligned_cols=26  Identities=15%  Similarity=0.309  Sum_probs=21.0

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.++..
T Consensus        63 d~~dGty~v~Y~p~~~G~y~i~V~~~   88 (108)
T 2dj4_A           63 DNGDGTHTVTYTPSQEGPYMVSVKYA   88 (108)
T ss_dssp             ECSSSEEEEEECCSSCEEEEEEEEES
T ss_pred             ECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence            34678888888888888888888875

>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=88.64  E-value=0.88  Score=25.24  Aligned_cols=26  Identities=15%  Similarity=0.361  Sum_probs=21.0

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.++..
T Consensus        62 d~~dGty~v~Y~p~~~G~y~i~V~~~   87 (113)
T 2dia_A           62 NNKDGTYAVTYVPLTAGMYTLTMKYG   87 (113)
T ss_dssp             ECTTSEEEEEEECSSCEEEEEEEEET
T ss_pred             ECCCCEEEEEEEeCCCccEEEEEEEC
Confidence            45678888888888888888888875

>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.47  E-value=1  Score=25.25  Aligned_cols=26  Identities=15%  Similarity=0.295  Sum_probs=21.1

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-.....|.|.|.++..
T Consensus        74 d~~dGty~v~Y~p~~~G~y~i~V~~~   99 (119)
T 2e9j_A           74 DNKDGTYAVTYIPDKTGRYMIGVTYG   99 (119)
T ss_dssp             ECCSSEEEEEECCCSCSEEEECCEES
T ss_pred             ECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence            34678899988888888888888875

>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=88.46  E-value=1.1  Score=25.45  Aligned_cols=27  Identities=19%  Similarity=0.437  Sum_probs=22.9

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|.|+-....+|.|.|.|+...
T Consensus        63 d~~dGty~V~Y~p~~~G~y~I~V~~~g   89 (124)
T 2dmb_A           63 ENEDGTYDIFYTAAKPGTYVIYVRFGG   89 (124)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred             eCCCCEEEEEEEcCCCEEEEEEEEECC
Confidence            346899999998889999999999863

>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A

Probab=88.20  E-value=0.89  Score=24.37  Aligned_cols=25  Identities=12%  Similarity=0.123  Sum_probs=18.0

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.|+-....+|.|.|.++..
T Consensus        58 ~~dGty~v~Y~p~~~G~y~i~V~~~   82 (96)
T 1v05_A           58 MGNRVYNVTYTVKEKGDYILIVKWG   82 (96)
T ss_dssp             CSTTEEEEEEECSSCEEEEEEEEET
T ss_pred             CCCCEEEEEEEeCCCEEEEEEEEEC
Confidence            3567777777777777777777764

>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=87.47  E-value=1.8  Score=24.71  Aligned_cols=27  Identities=22%  Similarity=0.305  Sum_probs=22.3

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|.|+-....+|.|.|.++...
T Consensus        80 d~~dGty~v~Y~p~~~G~y~I~V~~~g  106 (131)
T 2di9_A           80 DNGDGTCSVSYLPTKPGEYFVNILFEE  106 (131)
T ss_dssp             ECSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred             ECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            446799999988888999999998863

>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A

Probab=87.24  E-value=2.2  Score=23.69  Aligned_cols=26  Identities=8%  Similarity=0.133  Sum_probs=19.7

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      ..+|+|.|+-.....|.|.++++...
T Consensus        62 ~~~gty~v~ytP~~~G~h~v~V~~~g   87 (112)
T 2d7p_A           62 LDSDKHTIRFIPHENGVHSIDVKFNG   87 (112)
T ss_dssp             CBTTEEEEEECCSSCEEEEEEEEESS
T ss_pred             CCCCeEEEEEEcCCCEeEEEEEEECC
Confidence            45688888888777888888887753

>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=87.09  E-value=1.2  Score=24.34  Aligned_cols=26  Identities=12%  Similarity=0.203  Sum_probs=21.2

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.++..
T Consensus        60 d~~dGty~v~Y~p~~~G~y~I~V~~~   85 (105)
T 2dic_A           60 DNKDGSCSAEYIPFAPGDYDVNITYG   85 (105)
T ss_dssp             ECSSSCEEEEECCSSCEEEEEEEEET
T ss_pred             ECCCCeEEEEEEeCCCeEEEEEEEEC
Confidence            34678899988888888888888875

>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=87.01  E-value=1.5  Score=24.03  Aligned_cols=27  Identities=15%  Similarity=0.121  Sum_probs=22.6

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|-|+-.....|.|.|+++...
T Consensus        51 d~~dGty~v~ytP~e~G~h~v~V~~~g   77 (102)
T 2dlg_A           51 PMGKNSHCVRFVPQEMGVHTVSVKYRG   77 (102)
T ss_dssp             ECSSSEEEEEBCCCTTCEEEEEEESSS
T ss_pred             ECCCCEEEEEEEecCCEeEEEEEEECC
Confidence            346799999999889999999998863

>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.66  E-value=0.75  Score=25.21  Aligned_cols=27  Identities=19%  Similarity=0.361  Sum_probs=20.9

Q ss_pred             CCCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          11 SQEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        11 ~~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      .+..+|+|.|+-....+|.|.|.++..
T Consensus        59 ~d~~dGty~v~Y~p~~~G~y~I~V~~~   85 (105)
T 2ee6_A           59 DDHKNGSCGVSYIAQEPGNYEVSIKFN   85 (105)
T ss_dssp             CCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred             EECCCCEEEEEEEECCCceEEEEEEEC
Confidence            345678888888777888888888875

>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}

Probab=86.57  E-value=1.7  Score=22.87  Aligned_cols=24  Identities=13%  Similarity=0.122  Sum_probs=17.4

Q ss_pred             CCceEEEeecCCCCCeeEEEEEec
Q psy3300          14 PVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        14 ~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      .+|+|.|+-....+|.|.|+++..
T Consensus        52 ~dGty~v~Y~p~~~G~y~i~V~~~   75 (89)
T 3cnk_A           52 GSRLYSVSYLLKDKGEYTLVVKWG   75 (89)
T ss_dssp             ETTEEEEEEECCSCEEEEEEEEET
T ss_pred             CCCEEEEEEEECCCccEEEEEEEC
Confidence            467777777777777777777764

>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=86.36  E-value=2  Score=23.83  Aligned_cols=26  Identities=12%  Similarity=0.305  Sum_probs=21.3

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-....+|.|.|.++..
T Consensus        64 d~~dGty~v~Y~p~~~G~y~i~V~~~   89 (115)
T 2d7m_A           64 DNGDGTYTVSYLPDMSGRYTITIKYG   89 (115)
T ss_dssp             ECSSSCEEEEECCCSCEEEEEEEEES
T ss_pred             ECCCCEEEEEEEeCCCceEEEEEEEC
Confidence            34678899988888888888888885

>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=81.51  E-value=2.7  Score=23.68  Aligned_cols=26  Identities=12%  Similarity=0.239  Sum_probs=21.7

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|.|+-.....|.|.|.++..
T Consensus        77 d~~dGty~v~Y~p~~~G~~~i~V~~~  102 (128)
T 2dib_A           77 DNADGTYQVEYTPFEKGLHVVEVTYD  102 (128)
T ss_dssp             ECSSSEEEEEECCSSCSEEEEEEBSS
T ss_pred             ECCCCEEEEEEEeCCCEeEEEEEEEC
Confidence            34679999998888899999988885

>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.95  E-value=1.4  Score=25.17  Aligned_cols=26  Identities=15%  Similarity=0.268  Sum_probs=21.6

Q ss_pred             CCCCceEEEee-cCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRE-STTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~-s~~~~~~~~Ls~~~~   37 (97)
                      ++.+|+|+||- ....+|.|.+.|...
T Consensus        79 Dn~DGsy~v~Yr~~~~~g~~~I~V~~~  105 (124)
T 2di7_A           79 DRKDGSFIVRYRMYASYKNLKVEIKFQ  105 (124)
T ss_dssp             CCSSSCCEEECCCCSCCSCCEEEEESS
T ss_pred             ECCCCeEEEEEECCCCCCCEEEEEEEC
Confidence            45799999998 666679999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	97
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	9e-16
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	1e-15
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	2e-15
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	3e-15
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	3e-14
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	6e-14
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	1e-13
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-13
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	4e-13
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	5e-13
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	9e-13
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	9e-13
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	3e-12
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	4e-12
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	1e-11
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	2e-11
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	6e-11
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	6e-11
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	8e-11
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	1e-10
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	1e-10
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	1e-10
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	2e-10
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	7e-10
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	9e-10
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	2e-09
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	2e-09
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	3e-09
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	5e-09
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	2e-08
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	3e-08
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	4e-08
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	6e-08
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-07

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 9e-16
 Identities = 23/77 (29%), Positives = 36/77 (46%)

Query: 11  SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLT 70
           ++ P G F+VRES T  G + LS+        L + HY I +   G        +F+SL 
Sbjct: 24  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 83

Query: 71  SLITHHSVMPELLPCTL 87
            L+ ++S   + L   L
Sbjct: 84  QLVAYYSKHADGLCHRL 100

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 1e-15
 Identities = 20/74 (27%), Positives = 32/74 (43%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
            G+F++RES +  G F+LS+R   +     + HY I     G         F  L  L+
Sbjct: 26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV 85

Query: 74 THHSVMPELLPCTL 87
           H++   + L   L
Sbjct: 86 RHYTNASDGLCTRL 99

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-15
 Identities = 22/74 (29%), Positives = 34/74 (45%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
           P G F++RES T  G ++LS+R   +     + HY I +   G        +F +L  L+
Sbjct: 28  PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 87

Query: 74  THHSVMPELLPCTL 87
            H+S     L   L
Sbjct: 88  QHYSERAAGLSSRL 101

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 3e-15
 Identities = 21/74 (28%), Positives = 33/74 (44%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
           +G+FM+R+S T  G ++LS+R         + HY I     G         FS+L  L+
Sbjct: 23 MLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV 82

Query: 74 THHSVMPELLPCTL 87
           H+    + L   L
Sbjct: 83 DHYKKGNDGLCQKL 96

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 61.5 bits (149), Expect = 3e-14
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           + L  +  G F++R S   PG F ++    +      I HYL+         K F    S
Sbjct: 23  DALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPAR--IKHYLVQPNDTAAAKKTFPDFLS 80

Query: 68  SLTSL--ITHHSVMPELLPCTLSLHR 91
             +    +   +      P  L LH+
Sbjct: 81  EHSQFVNLLQWTKDTNGAPRFLKLHK 106

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 6e-14
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
            G F++R+S + P  F L+L   ++       ++ IL         + +     +FS L
Sbjct: 27 VDGLFLLRDSQSNPKAFVLTLCHHQKIK-----NFQILPCEDDGQTFFSLDDGNTKFSDL 81

Query: 70 TSLITHHSVMPELLPCTL 87
            L+  + +   +LPC L
Sbjct: 82 IQLVDFYQLNKGVLPCKL 99

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.9 bits (142), Expect = 1e-13
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +LS    G+F+VRES + PG  ++SL      +   + HY I   + G         F+
Sbjct: 19 YLLSSGINGSFLVRESESSPGQRSISL-----RYEGRVYHYRINTASDGKLYVSSESRFN 73

Query: 68 SLTSLITHHSVMPELLPCTL 87
          +L  L+ HHS + + L  TL
Sbjct: 74 TLAELVHHHSTVADGLITTL 93

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 3e-13
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
            G F++R+     G + LSL      H +   H+ I R   G       K       L 
Sbjct: 28 ADGLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAGGKAHCGPAELC 82

Query: 74 THHSVMPELLPCTL 87
            +S  P+ LPC L
Sbjct: 83 EFYSRDPDGLPCNL 96

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (140), Expect = 4e-13
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
             G F+VRES   P  F LSL   ++  H     YLIL + +     + +      F+ L
Sbjct: 32  VDGLFLVRESQRNPQGFVLSLCHLQKVKH-----YLILPSEEEGRLYFSMDDGQTRFTDL 86

Query: 70  TSLITHHSVMPELLPCTL 87
             L+  H +   +LPC L
Sbjct: 87  LQLVEFHQLNRGILPCLL 104

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.8 bits (139), Expect = 5e-13
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
             G+F++RES +  G F+LS++       + + HY I     G         F +L +L+
Sbjct: 34  KAGSFLIRESESNKGAFSLSVKDITTQGEV-VKHYKIRSLDNGGYYISPRITFPTLQALV 92

Query: 74  THHSVMPELLPCTL 87
            H+S   + L   L
Sbjct: 93  QHYSKKGDGLCQKL 106

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.8 bits (137), Expect = 9e-13
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L  + +G F++R S + PG F++S+R     H   + H+ ++R  KG      T++F 
Sbjct: 20 NLLMGKDIGFFIIRASQSSPGDFSISVR-----HEDDVQHFKVMRDTKGNYFLW-TEKFP 73

Query: 68 SLTSLITHHSVMP 80
          SL  L+ ++    
Sbjct: 74 SLNKLVDYYRTTS 86

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 9e-13
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
            GAF++R S      + LS+          + HY I R A G         F SL  L+
Sbjct: 24 ATGAFLIRVSEKPSADYVLSV-----RDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELV 78

Query: 74 THHSVMPELLPCTLS 88
           +H          L+
Sbjct: 79 NYHRAQSLSHGLRLA 93

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 3e-12
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           +L     G F+VREST  PG + L +          + HY I+  A    I      F 
Sbjct: 18 RLLYPPETGLFLVRESTNYPGDYTLCV-----SCEGKVEHYRIMYHASKLSIDE-EVYFE 71

Query: 68 SLTSLITHHSVMPELLPCTL 87
          +L  L+ H++   + L   L
Sbjct: 72 NLMQLVEHYTTDADGLCTRL 91

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 4e-12
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
            G +++R+S    G FALS+   ++ HH     Y I R   G       +  +S   L 
Sbjct: 27 SDGLYLLRQSRNYLGGFALSVAHGRKAHH-----YTIERELNGTYAIAGGRTHASPADLC 81

Query: 74 THHSVMPELLPCTLS 88
           +HS   + L C L 
Sbjct: 82 HYHSQESDGLVCLLK 96

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 1e-11
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
          + L     G F+VRES   PG + L +          + HY +L       I      F 
Sbjct: 18 QQLQPPEDGLFLVRESARHPGDYVLCV-----SFGRDVIHYRVLHRDGHLTIDE-AVFFC 71

Query: 68 SLTSLITHHSVMPELLPCTL 87
          +L  ++ H+S     +   L
Sbjct: 72 NLMDMVEHYSKDKGAICTKL 91

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (128), Expect = 2e-11
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
          E+LS++   GAF++RES + PG F+LS++         + H+ +LR   G        +F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLW-VVKF 70

Query: 67 SSLTSLITHHSVMPELLPCTLSL 89
          +SL  L+ +H          + L
Sbjct: 71 NSLNELVDYHRSTSVSRNQQIFL 93

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 6e-11
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
             G F++R      G +ALSL      +   + HYLI +   G        +F +L  L+
Sbjct: 51  TDGKFLLRPRKE-QGTYALSL-----IYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV 104

Query: 74  THHSVMPELLPCTL 87
            +  +  + L   L
Sbjct: 105 EYLKLKADGLIYCL 118

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 6e-11
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 10  LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA-----HYLILRTAKGYKIKGFTK 64
             +   G+F+VRES + PG F LS+R   +            H +I      Y + G  +
Sbjct: 17  TEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGG-GE 75

Query: 65  EFSSLTSLITHHSVMPELLPCTLSLHRYNP 94
            F SLT L+ H+   P +      L    P
Sbjct: 76  RFDSLTDLVEHYKKNPMVETLGTVLQLKQP 105

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.6 bits (123), Expect = 8e-11
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 10/85 (11%)

Query: 9  VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKGFT 63
          +L     G F++R+S + PG   L +          +  Y I R   GY           
Sbjct: 19 LLKGGVDGNFLIRDSESVPGALCLCVS-----FKKLVYSYRIFREKHGYYRIETDAHTPR 73

Query: 64 KEFSSLTSLITHHSVMPELLPCTLS 88
            F +L  L++ +    + L   LS
Sbjct: 74 TIFPNLQELVSKYGKPGQGLVVHLS 98

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 1e-10
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           +L    V G+F+ R S + PG   LS+       +  + H  I  T   Y + G  K F
Sbjct: 17 NLLLTRGVDGSFLARPSKSNPGDLTLSV-----RRNGAVTHIKIQNTGDYYDLYGGEK-F 70

Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
          ++L  L+ ++      L       
Sbjct: 71 ATLAELVQYYMEHHGQLKEKNGDV 94

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-10
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLI-LRTAKGYKIKGFTKEF 66
          E L + P G F++R+S+       +S++      +L I +     R      +K   K+F
Sbjct: 29 EKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQF 88

Query: 67 SSLTSLITHHS 77
           S+  LI ++ 
Sbjct: 89 DSVVHLIDYYV 99

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.6 bits (123), Expect = 1e-10
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
            +L  +  G F+VRES+ K GC+A S+ V  E  H      +I +TA GY        +S
Sbjct: 23  NLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKH-----CVINKTATGYGFAEPYNLYS 76

Query: 68  SLTSLITHHSVMP-----ELLPCTL 87
           SL  L+ H+         + L  TL
Sbjct: 77  SLKELVLHYQHTSLVQHNDSLNVTL 101

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.3 bits (120), Expect = 2e-10
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 6/73 (8%)

Query: 4  EITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT 63
             +        G F++R+S T+PG   L+             H  +     G       
Sbjct: 18 AQLVLAGGPRSHGLFVIRQSETRPGECVLTFN-----FQGKAKHLRLSLNGHGQCHVQ-H 71

Query: 64 KEFSSLTSLITHH 76
            F S+  ++ H 
Sbjct: 72 LWFQSVFDMLRHF 84

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 7e-10
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 11/86 (12%)

Query: 8  EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKG 61
          ++L    + G++++R+S + PG + L        +H  I  Y + +T  G          
Sbjct: 18 KLLLATGLDGSYLLRDSESVPGVYCLC-----VLYHGYIYTYRVSQTETGSWSAETAPGV 72

Query: 62 FTKEFSSLTSLITHHSVMPELLPCTL 87
            + F  + +LI+      + +   L
Sbjct: 73 HKRYFRKIKNLISAFQKPDQGIVIPL 98

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.3 bits (117), Expect = 9e-10
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 9   VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA-HYLILRTAKGYKIKGFTKE-- 65
           +L     GAFMVR+S T PG + +S+             HY I  T    K     ++  
Sbjct: 22  LLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYV 80

Query: 66  FSSLTSLITHHSVMPELLPCTL 87
           F S+  LI +H      L   L
Sbjct: 81  FDSIPLLIQYHQYNGGGLVTRL 102

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 2e-09
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
          G F+VRESTT PG + L+             H L++      + K     F S++ LI++
Sbjct: 27 GDFLVRESTTTPGQYVLTGL-----QSGQPKHLLLVDPEGVVRTKD--HRFESVSHLISY 79

Query: 76 HSVMPELLPCTLS 88
          H      +    S
Sbjct: 80 HMDNHLPIISAGS 92

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.1 bits (114), Expect = 2e-09
 Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 12/86 (13%)

Query: 8   EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           E L     G F+VR+++TK  G + L+LR              I      Y        F
Sbjct: 25  EKLRDTADGTFLVRDASTKMHGDYTLTLR-----KGGNNKSIKIFHRDGKYGFSD-PLTF 78

Query: 67  SSLTSLITHHSVMP-----ELLPCTL 87
           +S+  LI H+           L   L
Sbjct: 79  NSVVELINHYRNESLAQYNPKLDVKL 104

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 3e-09
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 26/99 (26%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF----- 62
            +L  +  G F+VR+S+T PG + LS+            HY+I  +     +        
Sbjct: 14  ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVS-----HYIINSSGPRPPVPPSPAQPP 68

Query: 63  -----------TKEFSSLTSLITHH-----SVMPELLPC 85
                       +EF SL +L+  +          + P 
Sbjct: 69  PGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPV 107

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 5e-09
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 14  PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
             G F++R      G +AL L      H   + HY I +   G       K+F +L  L+
Sbjct: 51  TNGKFLIRARD-NNGSYALCL-----LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV 104

Query: 74  THHSVMPELLPCTL 87
            H+S   + L   L
Sbjct: 105 EHYSYKADGLLRVL 118

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-08
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 8   EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
           + L     GA+++RES  +PGC+ L+LR   +       +Y +    K +      K F 
Sbjct: 48  DELLGGVEGAYILRESQRQPGCYTLALRFGNQTL-----NYRLFHDGKHF---VGEKRFE 99

Query: 68  SLTSLITHHSVMPELLPCT 86
           S+  L+T   +   +    
Sbjct: 100 SIHDLVTDGLITLYIETKA 118

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 3e-08
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
           +L  +P+G+F++R S +  G + LS             H+++     G + I G     
Sbjct: 23 NLLESQPLGSFLIRVSHSHVG-YTLSY-----KAQSSCCHFMVKLLDDGTFMIPGEKVAH 76

Query: 67 SSLTSLITHHSVMP-ELLPCTL 87
          +SL +L+T H   P E     L
Sbjct: 77 TSLDALVTFHQQKPIEPRRELL 98

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 4e-08
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 8/73 (10%)

Query: 8  EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE-- 65
           +L  +P G F++R+S  +   F++S        +    H  I +    +          
Sbjct: 25 ALLEGKPEGTFLLRDSAQEDYLFSVSF-----RRYSRSLHARIEQWNHNFSFDAHDPCVF 79

Query: 66 -FSSLTSLITHHS 77
              +T L+ H+ 
Sbjct: 80 HSPDITGLLEHYK 92

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.9 bits (106), Expect = 6e-08
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 8  EVLSQEPVGAFMVRES-TTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
           +LS +P G F++R S ++K G    +           I         + Y  +      
Sbjct: 21 AILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSV------EPYTKQQLN--N 72

Query: 67 SSLTSLITHHSVMPELLP 84
           S   +I  + +M     
Sbjct: 73 MSFAEIIMGYKIMDATNI 90

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.1 bits (101), Expect = 2e-07
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 8   EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
            +L + P  GAF+VR+       +A+S R   +  H       + +  +   +     EF
Sbjct: 23  HMLMRVPRDGAFLVRKRNEPN-SYAISFRAEGKIKH-----CRVQQEGQTVMLGN--SEF 74

Query: 67  SSLTSLITHHSVMPELLPCTLS--LHRYNP 94
            SL  LI+++   P      L   ++  N 
Sbjct: 75  DSLVDLISYYEKHPLYRKMKLRYPINEENS 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	97
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.97
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.96
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.96
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.96
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.96
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.96
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.96
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.95
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.95
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.95
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.95
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.95
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.95
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.94
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.94
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.94
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.94
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.93
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.93
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.93
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.92
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.92
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.92
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.92
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.91
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.9
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.89
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.89
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.87
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.82
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.62
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.44
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d3buxb3	88	Cbl {Human (Homo sapiens) [TaxId: 9606]}	96.35
d1wlha1	101	F-actin cross-linking gelation factor (ABP-120) re	89.7
d2d7na1	80	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	89.08
d2di8a1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	87.61
d2d7ma1	102	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	87.29
d2dj4a1	101	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	86.93
d1qfha1	104	F-actin cross-linking gelation factor (ABP-120) re	86.39
d2w0pa1	92	Filamin a {Human (Homo sapiens) [TaxId: 9606]}	85.77
d2diaa1	100	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	85.69
d2diba1	115	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	84.48
d2d7pa1	99	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	84.15
d2dica1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	83.83
d2dmca1	103	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	82.18
d1v05a_	96	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	81.56
d2di9a1	118	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	80.88

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-30  Score=145.00  Aligned_cols=87  Identities=22%  Similarity=0.324  Sum_probs=80.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+++|++.++|+||||+|++.+|.|+|||+..     +.++||+|...+++|++.+ ...|+||.+||+||+.++
T Consensus        11 isR~eAe~~L~~~~~G~FLVR~S~~~~g~~vLSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LI~~y~~~~   84 (97)
T d1jwoa_          11 ISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFG-----RDVIHYRVLHRDGHLTIDE-AVFFCNLMDMVEHYSKDK   84 (97)
T ss_dssp             CCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEESSSEESSTT-SCCBSCHHHHHHHHHHCC
T ss_pred             CCHHHHHHHhcCCCCCeEEEEecCCCCccEEEEEEec-----CceEEEEEEEcCCcEEecC-CcccCCHHHHHHHHhhCC
Confidence            7999999999988999999999999999999999985     8999999988777788866 778999999999999999


Q ss_pred             CCcceeecCCCCC
Q psy3300          81 ELLPCTLSLHRYN   93 (97)
Q Consensus        81 ~~l~~~L~~p~~~   93 (97)
                      ++|+|+|+.|+++
T Consensus        85 ~~L~~~L~~P~~k   97 (97)
T d1jwoa_          85 GAICTKLVRPKRK   97 (97)
T ss_dssp             TTSSSCCCCBCCC
T ss_pred             CCCCccCCccCcC
Confidence            9999999999864

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.9e-30  Score=144.16  Aligned_cols=87  Identities=26%  Similarity=0.349  Sum_probs=80.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||++|++.++|+||||+|++.+|.|+||++..     +.++||+|...+++|++.+ ...|+||.+||+||+.++
T Consensus        11 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~~~~   84 (101)
T d1k9aa2          11 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCE-----GKVEHYRIMYHASKLSIDE-EVYFENLMQLVEHYTTDA   84 (101)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECS-----SSEEEEEEEEETTEEESSS-SSCBSSHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHcCCCCCCEEEeccCCCCCCEEEEEEeC-----CccEEEEEEEcCCCceecC-CcccCCHHHHHHHHhhCC
Confidence            7899999999988999999999999999999999985     8999999999888888865 778999999999999999


Q ss_pred             CCcceeecCCCCC
Q psy3300          81 ELLPCTLSLHRYN   93 (97)
Q Consensus        81 ~~l~~~L~~p~~~   93 (97)
                      +|++|+|+.|+..
T Consensus        85 ~gl~~~L~~P~~~   97 (101)
T d1k9aa2          85 DGLCTRLIKPKVM   97 (101)
T ss_dssp             TTSSSCCCEECCC
T ss_pred             CCCceeCCccccC
Confidence            9999999999854

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=142.12  Aligned_cols=88  Identities=25%  Similarity=0.340  Sum_probs=80.1

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...  ++|+||||+|++.+|.|+|||+..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus         9 isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~   82 (100)
T d1rjaa_           9 ISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT-----QAVRHYKIWRRAGGRLHLNE-AVSFLSLPELVNYHR   82 (100)
T ss_dssp             CCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTT-----SSCEEEEEEECSSSCEEEET-TEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcC-----CCceEEEEEECCCCCEEecC-CCccCCHHHHHHHHh
Confidence            7999999999754  789999999999999999999985     89999999988766 88876 778999999999999


Q ss_pred             hCCCCcceeecCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p   94 (97)
                      .+++++.++|+.|++.+
T Consensus        83 ~~~~~~~~~L~~Pc~~~   99 (100)
T d1rjaa_          83 AQSLSHGLRLAAPCRKH   99 (100)
T ss_dssp             HCCTTSSSCCCSBCCCC
T ss_pred             hCCCCCccCcCeecCCC
Confidence            99999999999999876

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-29  Score=142.58  Aligned_cols=92  Identities=26%  Similarity=0.333  Sum_probs=79.8

Q ss_pred             CCHHHHHHHhC--CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLS--QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~--~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|.  ..++|+||||+|++.+|.|+|||+......+..|+||+|...++| |++.+ ...|+||.+||+||+
T Consensus         8 isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~-~~~F~sl~~LV~~y~   86 (103)
T d1qcfa2           8 ISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISP-RSTFSTLQELVDHYK   86 (103)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSS-SSCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecC-CcccCCHHHHHHHHh
Confidence            79999999984  358999999999999999999998754333578999999988766 66655 778999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .+++||+|+|+.||.+
T Consensus        87 ~~~~gL~~~L~~PC~~  102 (103)
T d1qcfa2          87 KGNDGLCQKLSVPCMS  102 (103)
T ss_dssp             SSCTTSSSCCCSBCCC
T ss_pred             hCCCCCCccCCccCCC
Confidence            9999999999999864

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.4e-29  Score=141.69  Aligned_cols=88  Identities=30%  Similarity=0.418  Sum_probs=80.3

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||.+|++.++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+ ...|+||.+||+||+.+
T Consensus        12 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~~-~~~F~sl~~LI~~y~~~   85 (101)
T d1opka2          12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYE-----GRVYHYRINTASDGKLYVSS-ESRFNTLAELVHHHSTV   85 (101)
T ss_dssp             CCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEECEECTTSCEESST-TSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHhcCCCCCeEEEEecCCCCCCEEEEEEcC-----cceEEEEeEECCCCCEEeCC-CcccCCHHHHHHHHhhC
Confidence            7999999999988999999999999999999999995     89999999988777 55554 77899999999999999


Q ss_pred             CCCcceeecCCCCCC
Q psy3300          80 PELLPCTLSLHRYNP   94 (97)
Q Consensus        80 ~~~l~~~L~~p~~~p   94 (97)
                      ++++.|+|+.|++.+
T Consensus        86 ~~~l~~~L~~P~pr~  100 (101)
T d1opka2          86 ADGLITTLHYPAPKR  100 (101)
T ss_dssp             CTTSSSCCCEECCCC
T ss_pred             CCCCceECCCccCCC
Confidence            999999999998765

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.2e-29  Score=145.91  Aligned_cols=89  Identities=30%  Similarity=0.396  Sum_probs=79.6

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...  ++|+||||+|++.+|.|+|||+..     +.++||+|.+..+| |++.+ ...|+||.+||+||+
T Consensus        12 isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~g~~~i~~-~~~F~sl~eLV~~Y~   85 (129)
T d1a81a1          12 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHG-----RKAHHYTIERELNGTYAIAG-GRTHASPADLCHYHS   85 (129)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEETT-SCCBSSHHHHHHHHT
T ss_pred             CCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeec-----ccceEEEEEEcCCCCeeecC-CcccCCHHHHHHHHh
Confidence            7999999999654  789999999999999999999995     89999999988776 77765 678999999999999


Q ss_pred             hCCCCcceeecCCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p~   95 (97)
                      .+++||+|+|+.|+..|.
T Consensus        86 ~~~~gl~~~L~~P~~~~~  103 (129)
T d1a81a1          86 QESDGLVCLLKKPFNRPQ  103 (129)
T ss_dssp             TCCTTSSSCCCEECCCCS
T ss_pred             hCCCCCcccCCCCCCCCC
Confidence            999999999999986653

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.9e-29  Score=141.23  Aligned_cols=91  Identities=25%  Similarity=0.324  Sum_probs=78.5

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++......+..|+|++|...++| |++.+ ...|+||.+||+||+
T Consensus        11 isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~-~~~F~sl~~LV~~y~   89 (105)
T d1lkka_          11 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISP-RITFPGLHELVRHYT   89 (105)
T ss_dssp             CCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESST-TSCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecC-CcccCCHHHHHHHHh
Confidence            799999999954  48999999999999999999999864333356999999987666 77765 778999999999999


Q ss_pred             hCCCCcceeecCCCC
Q psy3300          78 VMPELLPCTLSLHRY   92 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~   92 (97)
                      .+++||+|+|+.||+
T Consensus        90 ~~~~gL~~~L~~Pcp  104 (105)
T d1lkka_          90 NASDGLCTRLSRPCQ  104 (105)
T ss_dssp             HCCTTSSSCCCSBCC
T ss_pred             hCCCCCCccCCCcCC
Confidence            999999999999985

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6e-29  Score=145.48  Aligned_cols=89  Identities=28%  Similarity=0.403  Sum_probs=80.0

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|+..  ++|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+ ...|+||.+||+||+
T Consensus        13 i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~Lv~~Y~   86 (130)
T d2oq1a1          13 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD-----VRFHHFPIERQLNGTYAIAG-GKAHCGPAELCEFYS   86 (130)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEETT-SCCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeC-----CceEEEEEEEcCCCceeccC-CCCcCCHHHHHHHHh
Confidence            7899999999753  899999999999999999999995     89999999888766 77765 678999999999999


Q ss_pred             hCCCCcceeecCCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p~   95 (97)
                      .++++|+|+|+.|+..|.
T Consensus        87 ~~~~gL~~~L~~P~~r~~  104 (130)
T d2oq1a1          87 RDPDGLPCNLRKPCNRPS  104 (130)
T ss_dssp             HCCTTSSSCCCSBCCCCT
T ss_pred             hCCCCCCccCCccCCCCC
Confidence            999999999999987654

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.6e-29  Score=140.67  Aligned_cols=91  Identities=27%  Similarity=0.383  Sum_probs=79.2

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|.+.  ++|+||||+|++.+|.|+||++.........|+||+|...++| |++.+ ...|+||.+||+||+
T Consensus        12 i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~-~~~F~sl~eLV~~y~   90 (106)
T d1o48a_          12 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITS-RTQFNSLQQLVAYYS   90 (106)
T ss_dssp             CCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESST-TSEESSHHHHHHHHT
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcC-CeeECCHHHHHHHHh
Confidence            7899999999753  7999999999999999999999864333467899999988766 77765 778999999999999


Q ss_pred             hCCCCcceeecCCCC
Q psy3300          78 VMPELLPCTLSLHRY   92 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~   92 (97)
                      .++++|+|+|+.||+
T Consensus        91 ~~~~gL~~~L~~pcP  105 (106)
T d1o48a_          91 KHADGLCHRLTTVCP  105 (106)
T ss_dssp             TCCTTSSSCCCSBCC
T ss_pred             hCCCCCCccCCCcCC
Confidence            999999999999985

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-28  Score=142.45  Aligned_cols=86  Identities=27%  Similarity=0.326  Sum_probs=76.9

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|.+.  ++|+||||.|++ +|.|+|||+..     +.++||+|....+| |++.+ ...|+||.+||+||+
T Consensus        36 isR~eAe~lL~~~~~~dGtFLVR~S~~-~g~yvLSv~~~-----~~v~H~~I~~~~~g~~~l~~-~~~F~sl~~LV~~y~  108 (124)
T d2oq1a2          36 LTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYG-----KTVYHYLISQDKAGKYCIPE-GTKFDTLWQLVEYLK  108 (124)
T ss_dssp             CCHHHHHHHHHSSCCCTTEEEEEECSS-TTEEEEEEEET-----TEEEEEEEEECTTSCEESTT-SCCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCceEEeEecCC-CCCEEEEeecC-----CceEEEEEEECCCCCEEeCC-CcccCCHHHHHHHHh
Confidence            7899999999754  789999999965 78999999995     89999999988776 76654 678999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .++++|+|+|+.||+|
T Consensus       109 ~~~~gL~~~L~~PcP~  124 (124)
T d2oq1a2         109 LKADGLIYCLKEACPN  124 (124)
T ss_dssp             HCCTTSSSCCCSBCCC
T ss_pred             hCCCCCcccCCCcCcC
Confidence            9999999999999987

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.4e-28  Score=137.54  Aligned_cols=89  Identities=28%  Similarity=0.408  Sum_probs=78.2

Q ss_pred             CCHHHHHHHhCCC--CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~--~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|...  ++|+||||+|++.+|.|+||++......++.|+|++|...++| |++.+ ...|+||.+||+||+
T Consensus        13 i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~-~~~F~sl~~LV~~y~   91 (104)
T d1g83a2          13 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITT-RAQFETLQQLVQHYS   91 (104)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETT-TEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecC-CcccCCHHHHHHHHh
Confidence            7899999999653  7999999999999999999999865444578999999988766 77765 778999999999999


Q ss_pred             hCCCCcceeecCC
Q psy3300          78 VMPELLPCTLSLH   90 (97)
Q Consensus        78 ~~~~~l~~~L~~p   90 (97)
                      .+++||+|+|+.|
T Consensus        92 ~~~~gL~~~L~~P  104 (104)
T d1g83a2          92 ERAAGLSSRLVVP  104 (104)
T ss_dssp             HCCTTSSSCCCCC
T ss_pred             hCCCCCceeCCCC
Confidence            9999999999987

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.2e-28  Score=139.62  Aligned_cols=93  Identities=27%  Similarity=0.354  Sum_probs=79.9

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|..  .++|+||||+|++.+|.|+||++.... .+..|+||+|...++| |++.+ ...|+||.+||+||+
T Consensus        19 isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~-~~~~v~H~~i~~~~~g~~~l~~-~~~F~sl~eLV~~y~   96 (114)
T d1blja_          19 ISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITT-QGEVVKHYKIRSLDNGGYYISP-RITFPTLQALVQHYS   96 (114)
T ss_dssp             CCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCT-TTCBCCCEEEEEETTTEEEEET-TEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeecc-CCCEEEEEEEEEcCCCCEEecC-CceECCHHHHHHHHh
Confidence            789999998864  489999999999999999999986421 1357999999988766 77765 667999999999999


Q ss_pred             hCCCCcceeecCCCCCCC
Q psy3300          78 VMPELLPCTLSLHRYNPN   95 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~p~   95 (97)
                      .++++|+|+|+.||.+..
T Consensus        97 ~~~~gL~~~L~~PC~~~~  114 (114)
T d1blja_          97 KKGDGLCQKLTLPCVNLA  114 (114)
T ss_dssp             HCCSSSSSCCCCCSCCCC
T ss_pred             hCCCCCCccCCccCcCcC
Confidence            999999999999998863

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=137.00  Aligned_cols=87  Identities=25%  Similarity=0.447  Sum_probs=74.9

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc----EEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~----~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|.+  .++|+||||+|++.+|.|+|||+..     +.++||+|....++    |.+.+....|+||.+||+
T Consensus        12 isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV~   86 (105)
T d1nrva_          12 ISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHH-----QKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVD   86 (105)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEET-----TEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEEC-----CceeEEEEEEecCCCeEEEEECCCCcccCCHHHHHH
Confidence            799999999964  4789999999999999999999995     89999999886532    555553567999999999


Q ss_pred             HhhhCCCCcceeecCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~   92 (97)
                      ||+.++++|+|+|+.|+.
T Consensus        87 ~y~~~~~~L~~~L~~Pc~  104 (105)
T d1nrva_          87 FYQLNKGVLPCKLKHHCI  104 (105)
T ss_dssp             HHTTCCTTSSSCCCEECC
T ss_pred             HhccCcCCCCccCCcCCC
Confidence            999999999999999986

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=4.9e-28  Score=136.67  Aligned_cols=87  Identities=23%  Similarity=0.334  Sum_probs=76.0

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEeccc----CCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFT----KEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~----~~F~sl~~Lv~   74 (97)
                      |+|++||.+|.. .++|+||||+|++.+|.|+||++..     +.++||+|.+.++| |.+.+..    ..|+||.+||+
T Consensus        10 isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV~   84 (103)
T d1i3za_          10 LTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFK-----KLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVS   84 (103)
T ss_dssp             CCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECS-----SSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEeC-----CeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHHH
Confidence            789999999964 4889999999999999999999995     89999999887766 7775422    34999999999


Q ss_pred             HhhhCCCCcceeecCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~   92 (97)
                      ||+++++||+|+|+.|+.
T Consensus        85 ~y~~~~~gl~~~L~~P~~  102 (103)
T d1i3za_          85 KYGKPGQGLVVHLSNPIM  102 (103)
T ss_dssp             HTTSSSSSSSSCCCEECC
T ss_pred             HhhhCCCCCeEeCCcccc
Confidence            999999999999999974

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.6e-27  Score=137.08  Aligned_cols=86  Identities=24%  Similarity=0.353  Sum_probs=75.6

Q ss_pred             CCHHHHHHHhC--CCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLS--QEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~--~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|.  ..++|+||||+|+. +|.|+|||+..     +.++||+|...++| |++.+ ...|+||.+||+||+
T Consensus        36 isR~~Ae~lL~~~g~~~G~FLVR~S~~-~~~yvLSv~~~-----~~v~H~~I~~~~~g~~~~~~-~~~F~sL~~LI~~y~  108 (125)
T d1a81a2          36 ISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHE-----GKVLHYRIDKDKTGKLSIPE-GKKFDTLWQLVEHYS  108 (125)
T ss_dssp             CCHHHHHHHHHSSCCCTTCEEEEECSS-SSCEEEEEEET-----TEEEEEEEEECTTSCEECTT-SCCBSCHHHHHHHHT
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEecCC-CCCEEEEeecc-----ccceeEeeeEcCCCcEeccC-CcccCCHHHHHHHHh
Confidence            79999999985  34899999999854 78899999985     89999999988777 66654 678999999999999


Q ss_pred             hCCCCcceeecCCCCC
Q psy3300          78 VMPELLPCTLSLHRYN   93 (97)
Q Consensus        78 ~~~~~l~~~L~~p~~~   93 (97)
                      .++++|.|+|+.|+++
T Consensus       109 ~~~~gL~~~L~~P~~k  124 (125)
T d1a81a2         109 YKADGLLRVLTVPCQK  124 (125)
T ss_dssp             TCCTTSSSCCCCBCCC
T ss_pred             hCCCCCCccCCeeCCC
Confidence            9999999999999875

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.5e-27  Score=135.09  Aligned_cols=89  Identities=30%  Similarity=0.484  Sum_probs=76.4

Q ss_pred             CCHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCC-c---EEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAK-G---YKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~-~---~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|.+  .++|+||||+|++.+|.|+||++..     ++++||+|...++ +   |.+.+....|+||.+||+
T Consensus        17 isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI~   91 (113)
T d2qmsa1          17 ISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHL-----QKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVE   91 (113)
T ss_dssp             BCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEET-----TEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEeC-----CeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHHH
Confidence            689999999974  4899999999999999999999985     8999999987543 3   334443456999999999


Q ss_pred             HhhhCCCCcceeecCCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYNP   94 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~p   94 (97)
                      ||+.++++|+|+|+.|+.+-
T Consensus        92 ~y~~~~~~L~~~L~~pc~r~  111 (113)
T d2qmsa1          92 FHQLNRGILPCLLRHCCTRV  111 (113)
T ss_dssp             HHTTCCTTSSSCCCEECCSS
T ss_pred             HhccCCCCCccccCCCCcCc
Confidence            99999999999999999764

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=130.73  Aligned_cols=88  Identities=18%  Similarity=0.281  Sum_probs=76.4

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEec----ccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKG----FTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~----~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|.+. .+|+||||+|++.+|.|+||++..     +.++||+|....+| |.+.+    ....|+||.+||+
T Consensus        11 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~Li~   85 (104)
T d1d4ta_          11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH-----GYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLIS   85 (104)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHH
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEecC-----CCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHHHH
Confidence            7999999999754 689999999999999999999985     89999999998777 55432    1346999999999


Q ss_pred             HhhhCCCCcceeecCCCCC
Q psy3300          75 HHSVMPELLPCTLSLHRYN   93 (97)
Q Consensus        75 ~y~~~~~~l~~~L~~p~~~   93 (97)
                      ||+.++.++.++|+.|+++
T Consensus        86 ~y~~~~~gl~~~L~~P~~r  104 (104)
T d1d4ta_          86 AFQKPDQGIVIPLQYPVEK  104 (104)
T ss_dssp             HHTSSSSSSSSCCCEECCC
T ss_pred             HHhhCCCCCcEeCCccccC
Confidence            9999999999999999763

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=8.2e-27  Score=132.57  Aligned_cols=90  Identities=28%  Similarity=0.335  Sum_probs=75.0

Q ss_pred             CCHHHHHHHhCC-CCCceEEEeecCCCCCeeEEEEEecCC-CCCCceeEEEEEEeCCc---EEEecccCCCCCHHHHHHH
Q psy3300           1 MIQEITLEVLSQ-EPVGAFMVRESTTKPGCFALSLRVPKE-FHHLGIAHYLILRTAKG---YKIKGFTKEFSSLTSLITH   75 (97)
Q Consensus         1 isr~~ae~~L~~-~~~G~fLiR~s~~~~~~~~Ls~~~~~~-~~~~~v~h~~I~~~~~~---~~l~~~~~~F~sl~~Lv~~   75 (97)
                      |+|++||++|.+ .++|+||||+|++ +|.|+||++.... .....++||+|....++   |++.+ ...|+||.+||+|
T Consensus        13 isR~eAe~lL~~~~~~G~FLVR~S~~-~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~-~~~F~sl~~LV~~   90 (108)
T d1luia_          13 ISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAE-KYVFDSIPLLIQY   90 (108)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECCT-TTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSS-SCCBSSHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEecCC-CCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCC-CcccCCHHHHHHH
Confidence            789999999964 4789999999965 8899999997532 23467999999887654   55544 6789999999999


Q ss_pred             hhhCCCCcceeecCCCC
Q psy3300          76 HSVMPELLPCTLSLHRY   92 (97)
Q Consensus        76 y~~~~~~l~~~L~~p~~   92 (97)
                      |+.++++|+|+|++|+.
T Consensus        91 y~~~~~~L~~~L~~Pv~  107 (108)
T d1luia_          91 HQYNGGGLVTRLRYPVC  107 (108)
T ss_dssp             HHTTCCSSSSSSSEECC
T ss_pred             HhhCCCCCccCCCCcCC
Confidence            99999999999999964

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=132.02  Aligned_cols=90  Identities=22%  Similarity=0.273  Sum_probs=77.1

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|.+. .+|+||||+|.+.+|.|+|||+..     ++++||+|...+++|.+.+ ...|+||.+||+||+.+
T Consensus        10 isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~-----~~v~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~~~   83 (109)
T d2shpa2          10 ITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRN-----GAVTHIKIQNTGDYYDLYG-GEKFATLAELVQYYMEH   83 (109)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEET-----TEEEEEEEECSSSCEEETT-SCEESSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeC-----CcEEEEEEEEcCCeEEEcC-CcccCCHHHHHHHHHHC
Confidence            7999999999765 589999999999999999999985     8999999998888898876 77899999999999876


Q ss_pred             C------CCcceeecCCC--CCCCC
Q psy3300          80 P------ELLPCTLSLHR--YNPNF   96 (97)
Q Consensus        80 ~------~~l~~~L~~p~--~~p~~   96 (97)
                      .      +++.++|+.|.  +.|+=
T Consensus        84 ~~~~~~~~~~~~~L~~P~~~~~Pss  108 (109)
T d2shpa2          84 HGQLKEKNGDVIELKYPLNCADPTS  108 (109)
T ss_dssp             TTCSBSSSSCBCCCCEECCCCCCTT
T ss_pred             CCCcccCCCCeeeccccCCCCCCCC
Confidence            4      35668899884  45653

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=6.1e-26  Score=128.73  Aligned_cols=85  Identities=32%  Similarity=0.430  Sum_probs=72.3

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+.+|.+.++|+||||.| +.+|.|+||++..     +.++||+|...++|+++.+....|+||.+||+||+.++
T Consensus        16 isR~eAe~lL~~~~~G~FLVR~S-~~~~~y~Lsv~~~-----~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~~   89 (107)
T d1qada_          16 SNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVD-----GEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTS   89 (107)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEEC----CCEEEEEEET-----TEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHcCCCCCcEEEEec-CCCCCEEEEEEec-----CCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhCc
Confidence            79999999998889999999999 4688999999985     89999999999888776654667999999999999875


Q ss_pred             -----CCcceeecCCC
Q psy3300          81 -----ELLPCTLSLHR   91 (97)
Q Consensus        81 -----~~l~~~L~~p~   91 (97)
                           .++.++|+.|.
T Consensus        90 l~~~~~~l~~~L~~Pv  105 (107)
T d1qada_          90 LVQHNDSLNVTLAYPV  105 (107)
T ss_dssp             GGGTCTTCCCCCCEET
T ss_pred             cccccCCCceEccccc
Confidence                 56778888774

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=1.1e-26  Score=131.45  Aligned_cols=85  Identities=25%  Similarity=0.355  Sum_probs=73.0

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|.+. .+|+||||.| +.+|.|+|||+..     +.++||+|...+..|.+ + ...|.||.+||+||+.+
T Consensus        16 i~R~eAe~lL~~~~~~G~FLVR~S-~~~~~yvLSv~~~-----~~v~H~~I~~~~~~~~~-~-~~~F~sl~~LV~~y~~~   87 (105)
T d2fcia1          16 LTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAE-----GKIKHCRVQQEGQTVML-G-NSEFDSLVDLISYYEKH   87 (105)
T ss_dssp             SCSHHHHHHHHHSSSSCCEEEEEC-SSTTCEEEEEEET-----TEECCCEEBCCSSCEEC-S-SSEESTTHHHHHHHHHS
T ss_pred             CCHHHHHHHHHhCCCCCeEEEEec-CCCCCEEEEEEec-----cccEEEEEEecCCeEec-C-CcccCCHHHHHHHHhhC
Confidence            7899999999766 5899999999 5688999999985     89999999765443544 4 66899999999999999


Q ss_pred             CCCcceeecCCCCC
Q psy3300          80 PELLPCTLSLHRYN   93 (97)
Q Consensus        80 ~~~l~~~L~~p~~~   93 (97)
                      ++++.++|+.|...
T Consensus        88 ~~~~~~~L~~P~~~  101 (105)
T d2fcia1          88 PLYRKMKLRYPINE  101 (105)
T ss_dssp             CCSTTCSSCCCCCC
T ss_pred             CCCCccCCCCCCCC
Confidence            99999999999744

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=127.50  Aligned_cols=89  Identities=24%  Similarity=0.400  Sum_probs=77.7

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCc-EEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~-~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++|+++|.+.++|+||||+|++.++ |+|+++..     +.++||+|...++| |++.+....|+||.+||+||+++
T Consensus        16 isR~eAe~lL~~~~~G~FLvR~S~~~~~-y~Lsv~~~-----~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y~~~   89 (106)
T d2cs0a1          16 ISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQ-----SSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQK   89 (106)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCS-----SSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTS
T ss_pred             CCHHHHHHHHcCCCCCcEEEEecCCCCC-EEEEEEec-----CCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHHHHC
Confidence            7899999999988999999999987776 99999985     89999999988877 66665456799999999999998


Q ss_pred             CC-CcceeecCCCCCCC
Q psy3300          80 PE-LLPCTLSLHRYNPN   95 (97)
Q Consensus        80 ~~-~l~~~L~~p~~~p~   95 (97)
                      +. ++.+.|+.|+.+|.
T Consensus        90 ~~~~~~~~L~~P~~~~~  106 (106)
T d2cs0a1          90 PIEPRRELLTQPCRQKD  106 (106)
T ss_dssp             CCSSCCCCCCSBCCCSS
T ss_pred             CCCCccCcccCcCCCCC
Confidence            65 77899999998763

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.5e-25  Score=123.18  Aligned_cols=75  Identities=25%  Similarity=0.442  Sum_probs=68.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++|+++|...++|+||||.|++.+|.|+||++..     +.++||+|....+|+++.+ ...|+||.+||+||+.++
T Consensus        13 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~-~~~F~sl~~LV~~y~~~~   86 (97)
T d1r1qa_          13 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHE-----DDVQHFKVMRDTKGNYFLW-TEKFPSLNKLVDYYRTTS   86 (97)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSTTCEEEEEECS-----SSEEEEECEECTTCCEESS-SCCBSSHHHHHHHTTTSC
T ss_pred             CCHHHHHHHHhcCCCCCEEEeecCCCCCCEEEEEEec-----CCeEEEEEEEcCCCeEEeC-CCCcCCHHHHHHHHccCC
Confidence            7999999999988999999999999999999999985     8999999999888866555 678999999999999986


Q ss_pred             C
Q psy3300          81 E   81 (97)
Q Consensus        81 ~   81 (97)
                      .
T Consensus        87 l   87 (97)
T d1r1qa_          87 I   87 (97)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-25  Score=127.11  Aligned_cols=89  Identities=19%  Similarity=0.187  Sum_probs=75.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEeccc---CCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT---KEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~---~~F~sl~~Lv~~y~   77 (97)
                      |+|++||++|+..++|+||||+|++.+|.|+||++..     +.++|++|...+++|.+.+..   ..|+||.+||+||+
T Consensus        18 isR~~Ae~lL~~~~~GtFLVR~S~~~~~~~~LSv~~~-----~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV~~Y~   92 (112)
T d2izva2          18 MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRY-----SRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYK   92 (112)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEET-----TEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTC
T ss_pred             CCHHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEec-----CCceEEEEEEeCCeEEEeecccCcccCCCHHHHHHHHh
Confidence            7899999999988999999999999999999999995     899999999988888876422   25999999999999


Q ss_pred             hCCCCcc--eeecCCCCCC
Q psy3300          78 VMPELLP--CTLSLHRYNP   94 (97)
Q Consensus        78 ~~~~~l~--~~L~~p~~~p   94 (97)
                      .++.++.  ..|+.|...|
T Consensus        93 ~~~~~~~~~~llt~P~~r~  111 (112)
T d2izva2          93 DPSACMFFEPLLSTPLIRT  111 (112)
T ss_dssp             CGGGCCTTSCCCCEECCCC
T ss_pred             cccccccCccccCCCCCCC
Confidence            8877654  3477776544

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.5e-25  Score=122.92  Aligned_cols=79  Identities=29%  Similarity=0.431  Sum_probs=68.4

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||++|.+. ++|+||||+|++.+|.|+||++..     +.++||+|..+++|++..+ ...|.||.+||+||+.+
T Consensus        10 isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~~-----~~v~H~~I~~~~~g~~~~~-~~~F~sl~~LV~~y~~~   83 (96)
T d1jyra_          10 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG-----NDVQHFKVLRDGAGKYFLW-VVKFNSLNELVDYHRST   83 (96)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEET-----TEEEEEECEECTTSCEESS-SCEESSHHHHHHHTTSS
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeC-----CceEEEEEEECCCCeEEeC-CccCCCHHHHHHHHhhC
Confidence            7999999999654 889999999999999999999995     8999999999888755555 66799999999999998


Q ss_pred             CCCcce
Q psy3300          80 PELLPC   85 (97)
Q Consensus        80 ~~~l~~   85 (97)
                      +.....
T Consensus        84 ~l~~~~   89 (96)
T d1jyra_          84 SVSRNQ   89 (96)
T ss_dssp             CSCSSS
T ss_pred             CCCCCC
Confidence            765443

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.1e-25  Score=123.89  Aligned_cols=90  Identities=28%  Similarity=0.395  Sum_probs=75.5

Q ss_pred             CCHHHHHHHhCCC-CCceEEEeecCCCCCeeEEEEEecCC-----CCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQE-PVGAFMVRESTTKPGCFALSLRVPKE-----FHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~-~~G~fLiR~s~~~~~~~~Ls~~~~~~-----~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~   74 (97)
                      |+|++||++|++. ++|+||||+|++.+|.|+||++....     .....++|+.|...+++|.+.+ ...|+||.+||+
T Consensus         7 i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-~~~F~sl~~LV~   85 (108)
T d2shpa3           7 LSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGG-GERFDSLTDLVE   85 (108)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSS-SCCBSSHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCC-CcccCCHHHHHH
Confidence            7999999999755 78999999999999999999998531     1235689999988888888876 788999999999


Q ss_pred             HhhhCC----CCcceeecCCC
Q psy3300          75 HHSVMP----ELLPCTLSLHR   91 (97)
Q Consensus        75 ~y~~~~----~~l~~~L~~p~   91 (97)
                      ||+.++    +|+.++|+.|.
T Consensus        86 ~y~~~~l~~~~g~~~~L~~Pv  106 (108)
T d2shpa3          86 HYKKNPMVETLGTVLQLKQPL  106 (108)
T ss_dssp             HHHHSCCBCTTSCBCCCCEEC
T ss_pred             HHhhCCCCCCCCceEEcCCCC
Confidence            999874    56778888775

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-24  Score=122.95  Aligned_cols=85  Identities=26%  Similarity=0.359  Sum_probs=71.5

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcE-----------------EEeccc
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----------------KIKGFT   63 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~-----------------~l~~~~   63 (97)
                      |+|++||++|...++|+||||+|++.+|.|+||++..     ++++||+|...++++                 ++.+ .
T Consensus         7 isR~~Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (109)
T d2eyva1           7 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSEN-----SRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIG-D   80 (109)
T ss_dssp             CCHHHHHHHCSSCSTTCEEEECCCSSSSCEEEEEEET-----TEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEET-T
T ss_pred             CCHHHHHHHhcCCCCCeEEeeecCCCCCCEEEEEEEC-----CEEEEEEEEEcCCcceeeccccccccccccceEEeC-C
Confidence            7999999999888999999999999999999999985     899999999876542                 2222 4


Q ss_pred             CCCCCHHHHHHHhhhCCCCcceeecCCCC
Q psy3300          64 KEFSSLTSLITHHSVMPELLPCTLSLHRY   92 (97)
Q Consensus        64 ~~F~sl~~Lv~~y~~~~~~l~~~L~~p~~   92 (97)
                      ..|+||.+||+||+.+... .++|..|+.
T Consensus        81 ~~F~sl~~LV~~y~~~~l~-~~~L~~P~~  108 (109)
T d2eyva1          81 QEFDSLPALLEFYKIHYLD-TTTLIEPVS  108 (109)
T ss_dssp             EEESSHHHHHHHSSSSCSS-SSCCCSBCC
T ss_pred             eeeCCHHHHHHHHhhCcCC-CCccCCcCC
Confidence            5699999999999998753 467888875

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.5e-24  Score=120.38  Aligned_cols=84  Identities=25%  Similarity=0.266  Sum_probs=70.3

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhCC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMP   80 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~~   80 (97)
                      |+|++||.+|+  ++|+||||.|++.+|.|+||++..     +.++||+|...++.|.+.  ...|+||.+||+||+.++
T Consensus        14 i~R~~Ae~lL~--~~G~FLVR~S~~~~g~~vLSv~~~-----~~v~H~~I~~~~~~~~~~--~~~F~sl~~LV~~y~~~~   84 (104)
T d1mila_          14 LSRREAEALLQ--LNGDFLVRESTTTPGQYVLTGLQS-----GQPKHLLLVDPEGVVRTK--DHRFESVSHLISYHMDNH   84 (104)
T ss_dssp             CCHHHHHTTCC--STTEEEEEECCSSCSSEEEEEEET-----TEEEEEEEBCTTSSEECS--SCEESSHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHh--cCCcEEEEecCCCCCCEEEEEEEc-----cccceEEEEeCCCEEEeC--CeeECCHHHHHHHHhhCC
Confidence            79999999995  589999999999999999999995     899999997655556664  568999999999999877


Q ss_pred             CCc-----ceeecCCCCC
Q psy3300          81 ELL-----PCTLSLHRYN   93 (97)
Q Consensus        81 ~~l-----~~~L~~p~~~   93 (97)
                      .++     .+.|+.|...
T Consensus        85 ~~~~~~~~~~~L~~Pi~R  102 (104)
T d1mila_          85 LPIISAGSELCLQQPVER  102 (104)
T ss_dssp             CCEEETTEEECCCEECCC
T ss_pred             CCcccCCcceEeCCCcCC
Confidence            654     4667777643

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=8.6e-25  Score=124.60  Aligned_cols=86  Identities=26%  Similarity=0.298  Sum_probs=74.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCC-CCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~-~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++||.+|...++|+||||+|++. ++.|+|+++..     +.++|++|...+++|++.+ ...|+||.+||+||+++
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~~ls~~~~-----~~~~H~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~~~   91 (111)
T d1fu6a_          18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKG-----GNNKSIKIFHRDGKYGFSD-PLTFNSVVELINHYRNE   91 (111)
T ss_dssp             CCSHHHHHHSSSCSSCCCCCBSSCCSSSCCSBCEEEET-----TEEEECCCCCTTTCCCTTT-TSCCCCTTHHHHHHHTT
T ss_pred             CCHHHHHHHhCcCCCCEEEEEeccCCCCccEEEEEecC-----CceEEEEEEEcCCeEEECC-CcccCCHHHHHHHHhhC
Confidence            78999999999888999999999765 46799999985     8999999987777788865 77899999999999987


Q ss_pred             C-----CCcceeecCCCC
Q psy3300          80 P-----ELLPCTLSLHRY   92 (97)
Q Consensus        80 ~-----~~l~~~L~~p~~   92 (97)
                      +     .++.++|+.|..
T Consensus        92 ~l~~~~~~l~~~L~~Pv~  109 (111)
T d1fu6a_          92 SLAQYNPKLDVKLLYPVS  109 (111)
T ss_dssp             CSTTTCSSCCCCSCCCCC
T ss_pred             cCCccCCCCccccCcccc
Confidence            6     456788988875

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.6e-23  Score=114.65  Aligned_cols=75  Identities=23%  Similarity=0.332  Sum_probs=65.9

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEec------ccCCCCCHHHHHH
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKG------FTKEFSSLTSLIT   74 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~------~~~~F~sl~~Lv~   74 (97)
                      |+|++|+.+|++.++|+||||.|++.+|.|+||++..     +.++|++|...+++|.+.+      ....|+||.+||+
T Consensus        22 i~R~~Ae~~L~~~~~GtFLVR~S~~~~~~~~LSv~~~-----~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI~   96 (103)
T d2c9wa2          22 MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTS-----AGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLID   96 (103)
T ss_dssp             CCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEET-----TEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHH
T ss_pred             CCHHHHHHHhcCCCCCceEEeccCCCCCCEEEEEEEC-----CEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHHH
Confidence            7899999999988999999999999999999999985     8999999998887787753      1346999999999


Q ss_pred             HhhhCC
Q psy3300          75 HHSVMP   80 (97)
Q Consensus        75 ~y~~~~   80 (97)
                      ||+..+
T Consensus        97 ~y~~~s  102 (103)
T d2c9wa2          97 YYVQMC  102 (103)
T ss_dssp             HHHHHT
T ss_pred             HHHhhC
Confidence            998753

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=5e-24  Score=116.51  Aligned_cols=72  Identities=18%  Similarity=0.260  Sum_probs=60.4

Q ss_pred             CCHHHHHHHhCCC---CCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhh
Q psy3300           1 MIQEITLEVLSQE---PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHS   77 (97)
Q Consensus         1 isr~~ae~~L~~~---~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~   77 (97)
                      |+|++|+++|...   ++|+||||+|++.+|.|+|||+..     +.++||+|...++|+++.+ ...|+||.+||+||+
T Consensus        12 isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~~-----~~v~h~~I~~~~~~~~~~~-~~~F~sl~~LV~~y~   85 (86)
T d1rpya_          12 LSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQ-----GKAKHLRLSLNGHGQCHVQ-HLWFQSVFDMLRHFH   85 (86)
T ss_dssp             CCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEET-----TEEEEEEC----CCCHHHH-HHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEEC-----CceEEEEEEEcCCceEEeC-CCeeCCHHHHHHhhc
Confidence            7999999999764   579999999999999999999985     8999999999888866655 677999999999997


Q ss_pred             h
Q psy3300          78 V   78 (97)
Q Consensus        78 ~   78 (97)
                      .
T Consensus        86 t   86 (86)
T d1rpya_          86 T   86 (86)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.8e-21  Score=113.24  Aligned_cols=86  Identities=28%  Similarity=0.416  Sum_probs=65.4

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHH-----H
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLIT-----H   75 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~-----~   75 (97)
                      |+|++||++|.. ++|+||||+|++.+|.|+||++..     +.++||+|.+ ++++++.  ...|+||.+||+     +
T Consensus        42 isR~eAe~lL~~-~dGsFLVR~S~~~~g~y~LSv~~~-----~~v~H~~I~~-~g~~~~~--~~~F~sl~eLV~dgLv~~  112 (141)
T d1xa6a2          42 ISREQADELLGG-VEGAYILRESQRQPGCYTLALRFG-----NQTLNYRLFH-DGKHFVG--EKRFESIHDLVTDGLITL  112 (141)
T ss_dssp             CCHHHHHHHHCS-CTTBEEEEECSSSTTCEEEEEEET-----TEEEECCCEE-SSSEECS--SSCCCCSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHcC-CCCeEEEEecCCCCCCEEEEEEEC-----CEEEEEEEEE-CCCEEEC--CCeECCHHHHHhhhhhhh
Confidence            799999999965 579999999999999999999995     8999999976 4456654  557999999885     4


Q ss_pred             hhhCCCCcceeecCCCCCCCCC
Q psy3300          76 HSVMPELLPCTLSLHRYNPNFE   97 (97)
Q Consensus        76 y~~~~~~l~~~L~~p~~~p~~~   97 (97)
                      |+....+  ..+.....+|+||
T Consensus       113 ~~~~~~~--~~~~~~~t~p~~~  132 (141)
T d1xa6a2         113 YIETKAA--EYISKMTTNPIYE  132 (141)
T ss_dssp             HHHHSCH--HHHHHTTSSCCGG
T ss_pred             hcccccc--cccccccCccccc
Confidence            5554321  1234445666664

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.62  E-value=6.2e-16  Score=89.79  Aligned_cols=69  Identities=22%  Similarity=0.368  Sum_probs=56.0

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |+|++|+++|+..++|+||||.|++.+|.|+||++....  .+.++||+|...++       ...|.++.+++..|..
T Consensus        16 isr~~ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~--~~~v~h~~i~~~~~-------~~~~~sl~d~l~~~~~   84 (131)
T d1uura3          16 MGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEM--PARIKHYLVQPNDT-------AAAKKTFPDFLSEHSQ   84 (131)
T ss_dssp             CCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSS--SCCEEEEECCGGGS-------BTTTBCHHHHHTTCTT
T ss_pred             CCHHHHHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecC--CCcEEEEEEeecCC-------CcccccHHHHHHhHHH
Confidence            799999999998899999999999999999999997522  36799999976433       3456788887766543

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.4e-15  Score=87.94  Aligned_cols=74  Identities=20%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecC-CCCCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhhC
Q psy3300           1 MIQEITLEVLSQEPVGAFMVREST-TKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVM   79 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~-~~~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~~   79 (97)
                      |+|++|+++|.+.++|+||||.|+ +..|.++|+++..     +...|++|... ..|.. + ...|.||.|+|.+|+..
T Consensus        14 isr~~a~~~L~~~~~GtFLvR~S~~s~~G~~tis~~~~-----~~~~~~~i~~~-~p~t~-~-dl~~~sL~dlI~~y~~~   85 (141)
T d1bg1a3          14 ISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEK-----DISGSTQIQSV-EPYTK-Q-QLNNMSFAEIIMGYKIM   85 (141)
T ss_dssp             CCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCS-----SSCSSCCCCCC-CCBCG-G-GGTSSCHHHHTTSCCCB
T ss_pred             CCHHHHHHHhhCCCCCeEEEEecCCccCCCEEEEEEec-----CcCCceEEeec-CCeec-C-ccccCCHHHHHHhhhhh
Confidence            789999999998899999999997 5789999999875     55666666533 23442 2 55799999999999865


Q ss_pred             CCC
Q psy3300          80 PEL   82 (97)
Q Consensus        80 ~~~   82 (97)
                      ...
T Consensus        86 ~~~   88 (141)
T d1bg1a3          86 DAT   88 (141)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            543

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2.4e-08  Score=57.57  Aligned_cols=71  Identities=14%  Similarity=0.140  Sum_probs=47.1

Q ss_pred             CCHHHHHHHhCCCCCceEEEeecCCC-CCeeEEEEEecCCCCCCceeEEEEEEeCCcEEEecccCCCCCHHHHHHHhhh
Q psy3300           1 MIQEITLEVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSV   78 (97)
Q Consensus         1 isr~~ae~~L~~~~~G~fLiR~s~~~-~~~~~Ls~~~~~~~~~~~v~h~~I~~~~~~~~l~~~~~~F~sl~~Lv~~y~~   78 (97)
                      |++++|+++|+.+++|+||+|-|++. +|..++++....+.+ +...++.+..-    ...  ...=.||.|.|..|..
T Consensus        14 IsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~~~~~~-~~~~v~~lqP~----t~k--dl~~~sLad~Ird~~~   85 (142)
T d1bf5a3          14 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNG-GEPDFHAVEPY----TKK--ELSAVTFPDIIRNYKV   85 (142)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSS-SCCCCEECCCB----CHH--HHHSSCHHHHHHTCCC
T ss_pred             ecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEEecCCC-CceeEEeeCCC----chh--hhccCCHHHHHHHHHh
Confidence            68999999999999999999999986 588899887653222 23333333211    100  1112478888887753

>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Cbl
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0083  Score=30.43  Aligned_cols=36  Identities=19%  Similarity=0.288  Sum_probs=30.3

Q ss_pred             CHHHHHHHhCC--CCCceEEEeecCCCCCeeEEEEEec
Q psy3300           2 IQEITLEVLSQ--EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus         2 sr~~ae~~L~~--~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +=+|+...|..  ..+|+|+.|-|.++.|.|.+-....
T Consensus        10 TYDevk~rL~~~~~kPGSYiFRlSCTrlGQWAIGyvt~   47 (88)
T d3buxb3          10 TYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTA   47 (88)
T ss_dssp             CHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECT
T ss_pred             eHHHHHHHHHHHhcCCCceEEeeccccccceeeeeecc
Confidence            45677777765  3899999999999999999988875

>d1wlha1 b.1.18.10 (A:547-647) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=89.70  E-value=0.67  Score=23.64  Aligned_cols=27  Identities=15%  Similarity=0.304  Sum_probs=23.3

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|.|+-.....|.|.|++....
T Consensus        61 ~~~dGty~v~y~p~~~G~y~i~V~~~g   87 (101)
T d1wlha1          61 DNGDGTYDVEFEPKEAGDYVINLTLDG   87 (101)
T ss_dssp             CCSSSEEEEEECCCSCSEEEEEEEESS
T ss_pred             EcCCCeEEEEEEeCCCccEEEEEEECC
Confidence            347899999999999999999999863

>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.08  E-value=0.54  Score=23.38  Aligned_cols=27  Identities=19%  Similarity=0.325  Sum_probs=22.1

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      +..+|+|-|+-.....|.|.|+++...
T Consensus        35 ~~~dg~y~v~y~P~~~G~h~v~V~~~g   61 (80)
T d2d7na1          35 DNKDGTITVRYAPTEKGLHQMGIKYDG   61 (80)
T ss_dssp             ECSSSCEEEEECCSSCEEEEEEEEESS
T ss_pred             ECCCCEEEEEEEECCcEEEEEEEEECC
Confidence            346789999988888899999888864

>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.61  E-value=1  Score=23.07  Aligned_cols=26  Identities=23%  Similarity=0.286  Sum_probs=20.7

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEecC
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVPK   38 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~~   38 (97)
                      ..+|+|.++-.....|.|.|++....
T Consensus        54 ~~dg~y~v~y~P~~~G~y~i~V~~~g   79 (98)
T d2di8a1          54 LEDGTCKVSYFPTVPGVYIVSTKFAD   79 (98)
T ss_dssp             CTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred             CCCCEEEEEEEECCCceEEEEEEECC
Confidence            46788888888888888888888763

>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.29  E-value=0.83  Score=23.57  Aligned_cols=25  Identities=12%  Similarity=0.305  Sum_probs=17.8

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.++-.....|.|.|.++..
T Consensus        58 ~~dg~y~v~y~P~~~G~h~i~V~~~   82 (102)
T d2d7ma1          58 NGDGTYTVSYLPDMSGRYTITIKYG   82 (102)
T ss_dssp             CSSSCEEEEECCCSCEEEEEEEEES
T ss_pred             CCCcEEEEEEEECCCEeEEEEEEEC
Confidence            3567777777777777777777765

>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.91  Score=23.32  Aligned_cols=25  Identities=16%  Similarity=0.309  Sum_probs=18.1

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.++-.....|.|.|.++..
T Consensus        57 ~~dG~y~v~y~P~~~G~y~i~V~~~   81 (101)
T d2dj4a1          57 NGDGTHTVTYTPSQEGPYMVSVKYA   81 (101)
T ss_dssp             CSSSEEEEEECCSSCEEEEEEEEES
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEEC
Confidence            3567777777777777777777775

>d1qfha1 b.1.18.10 (A:646-749) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=86.39  E-value=0.75  Score=23.69  Aligned_cols=26  Identities=12%  Similarity=0.249  Sum_probs=21.9

Q ss_pred             CCCCceEEEeecCCCCCeeEEEEEec
Q psy3300          12 QEPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        12 ~~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      +..+|+|-|+-.....|.|.|.+...
T Consensus        64 d~~dGtY~v~y~p~~~G~~~i~V~~~   89 (104)
T d1qfha1          64 DNNDGTYGVVYDAPVEGNYNVNVTLR   89 (104)
T ss_dssp             ECSSSEEEEEECCCSSEEEEEEEEET
T ss_pred             ECCCCEEEEEEEeCCCEeEEEEEEEC
Confidence            34689999999888899999998885

>d2w0pa1 b.1.18.10 (A:2237-2328) Filamin a {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.77  E-value=0.71  Score=23.46  Aligned_cols=25  Identities=20%  Similarity=0.327  Sum_probs=16.5

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.|+-.....|.|.|++...
T Consensus        52 ~~dg~y~v~ytP~~~G~y~i~V~~~   76 (92)
T d2w0pa1          52 RKDGSCGVAYVVQEPGDYEVSVKFN   76 (92)
T ss_dssp             CTTSCEEEEEECSSCEEEEEEEEET
T ss_pred             CCCCEEEEEEEECCCceEEEEEEEC
Confidence            3566777776666677777766664

>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.69  E-value=0.8  Score=23.41  Aligned_cols=25  Identities=16%  Similarity=0.367  Sum_probs=16.3

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.++-.....|.|.|+++..
T Consensus        56 ~~dg~y~v~y~P~~~G~h~i~V~~~   80 (100)
T d2diaa1          56 NKDGTYAVTYVPLTAGMYTLTMKYG   80 (100)
T ss_dssp             CTTSEEEEEEECSSCEEEEEEEEET
T ss_pred             CCCCEEEEEEEeCcCccEEEEEEEC
Confidence            3566677766666666666666664

>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.48  E-value=0.86  Score=23.99  Aligned_cols=25  Identities=12%  Similarity=0.236  Sum_probs=19.6

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.++-.....|.|.|.+...
T Consensus        71 ~~dG~y~v~y~P~~~G~~~i~V~~~   95 (115)
T d2diba1          71 NADGTYQVEYTPFEKGLHVVEVTYD   95 (115)
T ss_dssp             CSSSEEEEEECCSSCSEEEEEEBSS
T ss_pred             CCCCEEEEEEEeCCCEeEEEEEEEC
Confidence            3578888888887888888888775

>d2d7pa1 b.1.18.10 (A:8-106) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.15  E-value=1.6  Score=22.26  Aligned_cols=25  Identities=8%  Similarity=0.153  Sum_probs=18.0

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.++-.....|.|.|.+...
T Consensus        55 ~~dg~y~v~y~P~~~G~~~i~V~~~   79 (99)
T d2d7pa1          55 LDSDKHTIRFIPHENGVHSIDVKFN   79 (99)
T ss_dssp             CBTTEEEEEECCSSCEEEEEEEEES
T ss_pred             CCCCEEEEEEEECCCCcEEEEEEEC
Confidence            3567777777777777777777775

>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.83  E-value=1  Score=22.92  Aligned_cols=24  Identities=13%  Similarity=0.195  Sum_probs=16.7

Q ss_pred             CCceEEEeecCCCCCeeEEEEEec
Q psy3300          14 PVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        14 ~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      .+|+|.++-.....|.|.|.++..
T Consensus        55 ~dg~y~v~y~P~~~G~y~i~V~~~   78 (98)
T d2dica1          55 KDGSCSAEYIPFAPGDYDVNITYG   78 (98)
T ss_dssp             SSSCEEEEECCSSCEEEEEEEEET
T ss_pred             CCCEEEEEEEECCCceEEEEEEEC
Confidence            567777777777777777777664

>d2dmca1 b.1.18.10 (A:8-110) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.82  Score=23.50  Aligned_cols=24  Identities=13%  Similarity=0.116  Sum_probs=15.6

Q ss_pred             CCceEEEeecCCCCCeeEEEEEec
Q psy3300          14 PVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        14 ~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      .+|+|.|+-.....|.|.+.++..
T Consensus        60 ~dg~y~v~f~P~~~G~h~i~V~~~   83 (103)
T d2dmca1          60 PNNHIGISFIPREVGEHLVSIKKN   83 (103)
T ss_dssp             TTTEEEEEECCCSCEEEEEECBBS
T ss_pred             CCCEEEEEEEeCCceeEEEEEEEC
Confidence            456666666666666666666664

>d1v05a_ b.1.18.10 (A:) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.56  E-value=1.3  Score=22.39  Aligned_cols=20  Identities=15%  Similarity=0.250  Sum_probs=8.1

Q ss_pred             ceEEEeecCCCCCeeEEEEE
Q psy3300          16 GAFMVRESTTKPGCFALSLR   35 (97)
Q Consensus        16 G~fLiR~s~~~~~~~~Ls~~   35 (97)
                      -.|.|-.+....+.+...+.
T Consensus        25 ~~F~I~~~~ag~g~l~v~v~   44 (96)
T d1v05a_          25 NSFTVDCSKAGTNMMMVGVH   44 (96)
T ss_dssp             EEEEEECTTSBSCCEEEEEE
T ss_pred             EEEEEEECCCCCCceEEEEE
Confidence            34555433333333443333

>d2di9a1 b.1.18.10 (A:8-125) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.88  E-value=2.5  Score=22.08  Aligned_cols=25  Identities=24%  Similarity=0.301  Sum_probs=19.2

Q ss_pred             CCCceEEEeecCCCCCeeEEEEEec
Q psy3300          13 EPVGAFMVRESTTKPGCFALSLRVP   37 (97)
Q Consensus        13 ~~~G~fLiR~s~~~~~~~~Ls~~~~   37 (97)
                      ..+|+|.|+-.....|.|.|++...
T Consensus        74 ~~dG~y~v~ytP~~~G~y~i~V~~~   98 (118)
T d2di9a1          74 NGDGTCSVSYLPTKPGEYFVNILFE   98 (118)
T ss_dssp             CSSSEEEEEEECSSSSEEEEEEEES
T ss_pred             CCCCEEEEEEEeCCcEeEEEEEEEC
Confidence            3578888888777788888888775