Diaphorina citri psyllid: psy3301


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------61
MVMKVSLRRNVRILLLGDRHVGKTSLILSLVSEEFPELVPSKAEEITIPPDVTPEMVPTHIVDYSEVDQTVDELTEEIQKAHVICLVYSVVDDASIDRLSSHWLPFLRNCLVDTCLPIVLVGNKVDLVDYSTVESSAKTLKNISEMFYYAQKAVLHPMAPIYISDKQELTPECIKALTRIFKVCDLDNDNLLSDKELNAFQRRCFDAPLSRDSLEDVKIVIRKNINDGVSANNCITLNGFLFLHNLFMQRGRSHTTWTVLRKFGYNEDLQISKEFLHPPLNIPATCTAELSDKGQQFLTTLFYRFDKDGDGALSPEEQARLFSLCPPECPPWTDREMRAMVATNSKGWITMQGFLCYWILTTLFNVNKTLEYLAYFGYPITDRENQTSGVLVTREKQVDLLKKQTTRNVYVCHVIGNRSTGKTALCQSILRKHHDSSKTSITSPVECDPPYTINTTTVYGQEKYLVLKEILVRDEQLPVLLPVDVDCDKYFSTSKIPVMLVAGKSDMPRARQDYLMQPDIFCETHKLSPAHSFSAANNDREVFVKLATMAAFPRFHPAWMLFYPDLTSHFYMFNLHDNKAYLWKTGLSVAVITLLGIIFAKFLRPPRK
ccccccccccEEEEEEccccccHHHHHHHHHccccccccccccccccccccccccCEEEEEEEcccccccHHHHHHHHccccEEEEEEEccccHHHHHHHHccHHHHHHHcccccccEEEEECcccccccHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccEEEEccccccccccHHHHHHEEEEEcHHHHHHHHHHccccccccccccccEEEccccccccccccccccEEEEEEEccccccHHHHHHHHHccccccccccccccccccccEEEEEEEEcccEEEEEEEEcccccccccccccccEEEEcccccccccEEEEEEccccccHHccccccHHHHHHHccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccc
*******RRNVRILLLGDRHVGKTSLILSLVSEEFPELVPSKAEEITIPPDVTPEMVPTHIVDYSEVDQTVDELTEEIQKAHVICLVYSVVDDASIDRLSSHWLPFLRNCLVDTCLPIVLVGNKVDLVDYSTVESSAKTLKNISEMFYYAQKAVLHPMAPIYISDKQELTPECIKALTRIFKVCDLDNDNLLSDKELNAFQRRCFDAPLSRDSLEDVKIVIRKNINDGVSANNCITLNGFLFLHNLFMQRGRSHTTWTVLRKFGYNEDLQISKEFLHPPLNIPATCTAELSDKGQQFLTTLFYRFDKDGDGALSPEEQARLFSLCPPECPPWTDREMRAMVATNSKGWITMQGFLCYWILTTLFNVNKTLEYLAYFGYPITDRENQTSGVLVTREKQV*L*KKQTTRNVYVCHVIGNRSTGKTALCQSILRK***********PVECDPPYTINTTTVYGQEKYLVLKEILVRDEQLPVLLPVDVDCDKYFSTSKIPVMLVAGKSDMPRARQDYLMQPDIFCETHKLSPAHSFSAANNDREVFVKLATMAAFPRFHPAWMLFYPDLTSHFYMFNLHDNKAYLWKTGLSVAVITLLGIIFAKFLRP***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVMKVSLRRNVRILLLGDRHVGKTSLILSLVSEEFPELVPSKAEEITIPPDVTPEMVPTHIVDYSEVDQTVDELTEEIQKAHVICLVYSVVDDASIDRLSSHWLPFLRNCLVDTCLPIVLVGNKVDLVDYSTVESSAKTLKNISEMFYYAQKAVLHPMAPIYISDKQELTPECIKALTRIFKVCDLDNDNLLSDKELNAFQRRCFDAPLSRDSLEDVKIVIRKNINDGVSANNCITLNGFLFLHNLFMQRGRSHTTWTVLRKFGYNEDLQISKEFLHPPLNIPATCTAELSDKGQQFLTTLFYRFDKDGDGALSPEEQARLFSLCPPECPPWTDREMRAMVATNSKGWITMQGFLCYWILTTLFNVNKTLEYLAYFGYPITDRENQTSGVLVTREKQVDLLKKQTTRNVYVCHVIGNRSTGKTALCQSILRKHHDSSKTSITSPVECDPPYTINTTTVYGQEKYLVLKEILVRDEQLPVLLPVDVDCDKYFSTSKIPVMLVAGKSDMPRARQDYLMQPDIFCETHKLSPAHSFSAANNDREVFVKLATMAAFPRFHPAWMLFYPDLTSHFYMFNLHDNKAYLWKTGLSVAVITLLGIIFAKFLRPPRK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mitochondrial Rho GTPase Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.very confidentQ298L5
Mitochondrial Rho GTPase Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.confidentQ94263
Mitochondrial Rho GTPase Mitochondrial GTPase involved in mitochondrial trafficking. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria. Required for axonal transport to synapses within nerve terminals. Required presynaptically but not postsynaptically at neuromuscular junctions (NMJs).confidentQ8IMX7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0019725 [BP]cellular homeostasisprobableGO:0009987, GO:0042592, GO:0065007, GO:0008150, GO:0044763, GO:0065008, GO:0044699
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0007010 [BP]cytoskeleton organizationprobableGO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:0031307 [CC]integral to mitochondrial outer membraneprobableGO:0031975, GO:0043229, GO:0031306, GO:0031301, GO:0031300, GO:0032592, GO:0043227, GO:0043226, GO:0031224, GO:0005737, GO:0005575, GO:0031090, GO:0016021, GO:0016020, GO:0044444, GO:0005739, GO:0044455, GO:0031968, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0019867, GO:0005623, GO:0005622, GO:0044446, GO:0005740, GO:0005741, GO:0044429, GO:0044424, GO:0044425, GO:0044422
GO:0005743 [CC]mitochondrial inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0007265 [BP]Ras protein signal transductionprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0035556, GO:0007264, GO:0050789, GO:0044699
GO:0047497 [BP]mitochondrion transport along microtubuleprobableGO:0072384, GO:0006928, GO:0034643, GO:0051654, GO:0051656, GO:0044699, GO:0030705, GO:0009987, GO:0006810, GO:0044765, GO:0010970, GO:0008150, GO:0051649, GO:0051646, GO:0051234, GO:0051179, GO:0051640, GO:0051641, GO:0007017, GO:0046907, GO:0007018, GO:0044763
GO:0005819 [CC]spindleprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005635 [CC]nuclear envelopeprobableGO:0005575, GO:0005623, GO:0005634, GO:0044464, GO:0031967, GO:0031975, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J0V, chain A
Confidence level:very confident
Coverage over the Query: 7-157
View the alignment between query and template
View the model in PyMOL
Template: 2Q3H, chain A
Confidence level:very confident
Coverage over the Query: 409-554
View the alignment between query and template
View the model in PyMOL
Template: 3MWU, chain A
Confidence level:very confident
Coverage over the Query: 170-252,288-318,339-360
View the alignment between query and template
View the model in PyMOL
Template: 1IJ5, chain A
Confidence level:confident
Coverage over the Query: 167-360
View the alignment between query and template
View the model in PyMOL