Diaphorina citri psyllid: psy3416

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHcccccccccHHHHHHHHHHccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCEEcccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEF****
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MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Argininosuccinate lyase confidentQ3SM68
Argininosuccinate lyase confidentB7V5F3
Argininosuccinate lyase confidentB0KH03

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044238 [BP]primary metabolic processprobableGO:0008150, GO:0008152
GO:0071704 [BP]organic substance metabolic processprobableGO:0008150, GO:0008152
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0004056 [MF]argininosuccinate lyase activityprobableGO:0003824, GO:0016829, GO:0003674, GO:0016840, GO:0016842
GO:0044237 [BP]cellular metabolic processprobableGO:0009987, GO:0008150, GO:0008152

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.3.-.-Carbon-nitrogen lyases.probable
4.3.2.-Lyases acting on amides, amidines, etc.probable
4.3.2.1Argininosuccinate lyase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2E9F, chain A
Confidence level:very confident
Coverage over the Query: 1-151,249-443
View the alignment between query and template
View the model in PyMOL
Template: 1C3C, chain A
Confidence level:very confident
Coverage over the Query: 21-98,109-159,185-261
View the alignment between query and template
View the model in PyMOL
Template: 1TJ7, chain A
Confidence level:very confident
Coverage over the Query: 155-186
View the alignment between query and template
View the model in PyMOL