Psyllid ID: psy3416

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccccccHHHHHHHHcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHcEcccccccccEcHHHHHHHHHccccccccccHHHHHHHHcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHcEcccccccccEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHccHHHHHcccccccHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
mivtdlrlYTRKHIDIIIELLLTMIKHLTDLsdkhaktimpgfthfqiaqpiSLGHYLLAYASMFQRDINRLIDcrkrvnisplgsaalaGTTHHINRYLTAKLldfekpsensldsisdrDFVIEFISTCCLIVMHLSRISEEFIIFmnpqfnfltlpesfltgssimpqkknpdvkDLRQRAALAGTTHHINRYLTAKLldfekpsensldsisdrDFVIEFISTCCLIVMHLSRISEEFIIFmnpqfnfltlpesfltgssimpqkknpdvLELIRGKTGRIYANLINILTTMKCQTLAYNKdlqedklplfdtvDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLvkkgvpfrtshEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIkfknhiggtspeqVKITVQGFRFYIQKITNKLEFKFSD
mivtdlrlytrKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGssimpqkknpDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGvpfrtsheiVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKnhiggtspeqVKITVQGFRFYIQKITNKLEFKFSD
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD
**VTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFE********SISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTG******************AALAGTTHHINRYLTAKLLDFE********SISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMP**KNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEF****
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNK*******
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD
MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFS*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVNISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKITNKLEFKFSD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query455 2.2.26 [Sep-21-2011]
Q2SQ67468 Argininosuccinate lyase O yes N/A 0.716 0.696 0.442 2e-80
Q21EF4469 Argininosuccinate lyase O yes N/A 0.538 0.522 0.541 4e-80
A1AX52480 Argininosuccinate lyase O yes N/A 0.538 0.510 0.557 2e-79
Q1QSV4467 Argininosuccinate lyase O yes N/A 0.578 0.563 0.501 3e-79
Q3JDS2467 Argininosuccinate lyase O yes N/A 0.674 0.657 0.458 4e-79
Q0VM25464 Argininosuccinate lyase O yes N/A 0.529 0.519 0.558 8e-78
Q31JG7462 Argininosuccinate lyase O yes N/A 0.556 0.547 0.521 4e-77
Q6FFB2477 Argininosuccinate lyase O yes N/A 0.626 0.597 0.484 3e-76
Q82TN0461 Argininosuccinate lyase O yes N/A 0.676 0.668 0.450 6e-76
C1DJ48464 Argininosuccinate lyase O yes N/A 0.553 0.543 0.527 7e-76
>sp|Q2SQ67|ARLY_HAHCH Argininosuccinate lyase OS=Hahella chejuensis (strain KCTC 2396) GN=argH PE=3 SV=1 Back     alignment and function desciption
 Score =  300 bits (768), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/339 (44%), Positives = 214/339 (63%), Gaps = 13/339 (3%)

Query: 121 RDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSI-----MPQKKNP 175
           RD V    +    ++  L+ ++E     + P F  L   +    G  +     M ++   
Sbjct: 128 RDEVDVIAAELLRLIAALADLAEREADAIMPGFTHLQTAQPVTFGHHMLAWAEMLKRDFS 187

Query: 176 DVKDLRQR--------AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFIST 227
            + D R+R        AALAGTT+ I+R  T++LL F  P+ENSLD++SDRDF IEF S 
Sbjct: 188 RLADCRERFNVSPLGAAALAGTTYSIDRQYTSELLGFNGPAENSLDAVSDRDFAIEFCSF 247

Query: 228 CCLIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYA 287
             L++MHLSR SEE +++ + QFNF+ LP+ F TGSSIMPQKKNPDV ELIRGK+GR+  
Sbjct: 248 ASLLMMHLSRFSEELVLWTSAQFNFINLPDRFCTGSSIMPQKKNPDVPELIRGKSGRVSG 307

Query: 288 NLINILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAI 347
           +LI++L  MK Q LAYNKD QEDK PLFD +D +  CL A G ++   + N   M E+A 
Sbjct: 308 HLISLLMLMKSQPLAYNKDNQEDKEPLFDAIDTVKGCLKAYGDMMPAVSVNRDAMAESAR 367

Query: 348 KGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDI 407
           +GFS +TD+ADYLV+KG+PFR +HE+VG  +       +   ++SL EL+ F + I  D+
Sbjct: 368 RGFSTATDLADYLVRKGLPFRDAHEVVGKAVALGVSSGRDLSEMSLEELREFSADIEVDV 427

Query: 408 IDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQKIT 446
            ++L +E S+  +NHIGGT+PEQV+  V   R ++++ T
Sbjct: 428 FEVLTLEGSVNARNHIGGTAPEQVRAAVVRTREWLKRNT 466

Hahella chejuensis (strain KCTC 2396) (taxid: 349521)
EC: 4EC: .EC: 3EC: .EC: 2EC: .EC: 1
>sp|Q21EF4|ARLY_SACD2 Argininosuccinate lyase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|A1AX52|ARLY_RUTMC Argininosuccinate lyase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q1QSV4|ARLY_CHRSD Argininosuccinate lyase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q3JDS2|ARLY_NITOC Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q0VM25|ARLY_ALCBS Argininosuccinate lyase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q31JG7|ARLY_THICR Argininosuccinate lyase OS=Thiomicrospira crunogena (strain XCL-2) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q6FFB2|ARLY_ACIAD Argininosuccinate lyase OS=Acinetobacter sp. (strain ADP1) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q82TN0|ARLY_NITEU Argininosuccinate lyase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|C1DJ48|ARLY_AZOVD Argininosuccinate lyase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=argH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
359394679467 Argininosuccinate lyase [Halomonas boliv 0.545 0.531 0.546 2e-80
152997592466 argininosuccinate lyase [Marinomonas sp. 0.685 0.669 0.466 2e-80
126666602472 response regulator receiver domain prote 0.589 0.567 0.514 1e-79
326796190466 argininosuccinate lyase [Marinomonas med 0.685 0.669 0.463 1e-79
352100625467 argininosuccinate lyase [Halomonas sp. H 0.527 0.513 0.560 2e-79
94499846463 argininosuccinate lyase [Bermanella mari 0.683 0.671 0.466 2e-79
399543547472 argininosuccinate lyase [Marinobacter sp 0.589 0.567 0.518 2e-79
333907103466 argininosuccinate lyase [Marinomonas pos 0.674 0.658 0.467 2e-79
448745949467 Argininosuccinate lyase [Halomonas titan 0.527 0.513 0.552 4e-79
88797658464 Argininosuccinate lyase [Reinekea blande 0.580 0.568 0.525 7e-79
>gi|359394679|ref|ZP_09187732.1| Argininosuccinate lyase [Halomonas boliviensis LC1] gi|357971926|gb|EHJ94371.1| Argininosuccinate lyase [Halomonas boliviensis LC1] Back     alignment and taxonomy information
 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 187/256 (73%)

Query: 184 AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFI 243
           AALAGTT+ I+R++TA+LL F++P+ENSLD++SDRDF IEF S   +++MHLSR+SEE +
Sbjct: 202 AALAGTTYPIDRHVTAELLGFDRPTENSLDAVSDRDFAIEFTSFASILLMHLSRMSEELV 261

Query: 244 IFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAY 303
           ++ + QFNF+ LP+ F TGSSIMPQKKNPDV EL+RGKTGR+Y +L+++LT MK Q LAY
Sbjct: 262 LWTSAQFNFIDLPDRFCTGSSIMPQKKNPDVPELVRGKTGRVYGHLMSLLTLMKSQPLAY 321

Query: 304 NKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKK 363
           NKD QEDK PLFD VD +  CL A   ++      +  MYE A +GFS +TD+ADYLV+K
Sbjct: 322 NKDNQEDKEPLFDAVDTVRDCLKAFADMVPAIEPKKASMYEAARRGFSTATDLADYLVRK 381

Query: 364 GVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHI 423
           GV FR +HEIVG  + Y  +  K   ++SL ELK F   I  D+ ++L +E S+  +NHI
Sbjct: 382 GVAFRDAHEIVGQSVAYGLKSEKDLSEMSLDELKQFSDTIEQDVFEVLTLEGSVAARNHI 441

Query: 424 GGTSPEQVKITVQGFR 439
           GGT+P QV+   Q  R
Sbjct: 442 GGTAPNQVRAAAQRAR 457

Source: Halomonas boliviensis LC1

Species: Halomonas boliviensis

Genus: Halomonas

Family: Halomonadaceae

Order: Oceanospirillales

Class: Gammaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|152997592|ref|YP_001342427.1| argininosuccinate lyase [Marinomonas sp. MWYL1] gi|150838516|gb|ABR72492.1| argininosuccinate lyase [Marinomonas sp. MWYL1] Back     alignment and taxonomy information
>gi|126666602|ref|ZP_01737580.1| response regulator receiver domain protein (CheY-like) [Marinobacter sp. ELB17] gi|126628990|gb|EAZ99609.1| response regulator receiver domain protein (CheY-like) [Marinobacter sp. ELB17] Back     alignment and taxonomy information
>gi|326796190|ref|YP_004314010.1| argininosuccinate lyase [Marinomonas mediterranea MMB-1] gi|326546954|gb|ADZ92174.1| Argininosuccinate lyase [Marinomonas mediterranea MMB-1] Back     alignment and taxonomy information
>gi|352100625|ref|ZP_08958212.1| argininosuccinate lyase [Halomonas sp. HAL1] gi|350601045|gb|EHA17100.1| argininosuccinate lyase [Halomonas sp. HAL1] Back     alignment and taxonomy information
>gi|94499846|ref|ZP_01306382.1| argininosuccinate lyase [Bermanella marisrubri] gi|94428047|gb|EAT13021.1| argininosuccinate lyase [Oceanobacter sp. RED65] Back     alignment and taxonomy information
>gi|399543547|ref|YP_006556855.1| argininosuccinate lyase [Marinobacter sp. BSs20148] gi|399158879|gb|AFP29442.1| Argininosuccinate lyase [Marinobacter sp. BSs20148] Back     alignment and taxonomy information
>gi|333907103|ref|YP_004480689.1| argininosuccinate lyase [Marinomonas posidonica IVIA-Po-181] gi|333477109|gb|AEF53770.1| Argininosuccinate lyase [Marinomonas posidonica IVIA-Po-181] Back     alignment and taxonomy information
>gi|448745949|ref|ZP_21727619.1| Argininosuccinate lyase [Halomonas titanicae BH1] gi|445566677|gb|ELY22783.1| Argininosuccinate lyase [Halomonas titanicae BH1] Back     alignment and taxonomy information
>gi|88797658|ref|ZP_01113247.1| Argininosuccinate lyase [Reinekea blandensis MED297] gi|88779830|gb|EAR11016.1| Argininosuccinate lyase [Reinekea sp. MED297] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
TIGR_CMR|GSU_0156458 GSU_0156 "argininosuccinate ly 0.553 0.550 0.503 2e-63
TIGR_CMR|ECH_0937470 ECH_0937 "argininosuccinate ly 0.578 0.559 0.454 1.3e-61
TIGR_CMR|BA_4879462 BA_4879 "argininosuccinate lya 0.545 0.536 0.471 2.7e-59
TIGR_CMR|CHY_2259456 CHY_2259 "argininosuccinate ly 0.542 0.541 0.473 1.1e-57
TIGR_CMR|SPO_0332463 SPO_0332 "argininosuccinate ly 0.553 0.544 0.454 1.7e-57
TIGR_CMR|DET_1261461 DET_1261 "argininosuccinate ly 0.567 0.559 0.453 1.2e-56
TIGR_CMR|SO_0279455 SO_0279 "argininosuccinate lya 0.545 0.545 0.463 4.8e-55
TAIR|locus:2183825517 AT5G10920 [Arabidopsis thalian 0.529 0.466 0.448 3e-53
UNIPROTKB|Q9KNT9458 argH "Argininosuccinate lyase" 0.553 0.550 0.440 2.1e-52
TIGR_CMR|VC_2641458 VC_2641 "argininosuccinate lya 0.553 0.550 0.440 2.1e-52
TIGR_CMR|GSU_0156 GSU_0156 "argininosuccinate lyase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 127/252 (50%), Positives = 170/252 (67%)

Query:   185 ALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFII 244
             ALAGTT  I+R   A+LLDF   + NSLDS+SDRDF +EF+    +++MHLSR SEE I+
Sbjct:   201 ALAGTTFPIDREHVAELLDFPGVTRNSLDSVSDRDFALEFMGASSILMMHLSRFSEELIL 260

Query:   245 FMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYN 304
             +   +F F+ L +SF TGSSIMPQKKNPDV EL+RGKTGR+Y NL+ +LT MK   LAYN
Sbjct:   261 WSTSEFKFVELTDSFCTGSSIMPQKKNPDVPELVRGKTGRVYGNLMALLTVMKALPLAYN 320

Query:   305 KDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKG 364
             KD+QEDK PLFDT+D +   L     ++ +   N   M   A KGFS +TDVADYLV++G
Sbjct:   321 KDMQEDKEPLFDTIDTVKGSLKIFADMVREMRINAGNMRAAAAKGFSTATDVADYLVRQG 380

Query:   365 VPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHIG 424
             +PFR +HE+VG  + YC    K   DL++ E + F   I +DI D + +E S+  +   G
Sbjct:   381 MPFRDAHEVVGKTVAYCIANGKDLPDLTMDEWQGFSDKIGEDIFDAITLEASVNARVATG 440

Query:   425 GTSPEQVKITVQ 436
             GT+ E+VK  ++
Sbjct:   441 GTALERVKAEIE 452
GO:0004056 "argininosuccinate lyase activity" evidence=ISS
GO:0006526 "arginine biosynthetic process" evidence=ISS
TIGR_CMR|ECH_0937 ECH_0937 "argininosuccinate lyase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4879 BA_4879 "argininosuccinate lyase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2259 CHY_2259 "argininosuccinate lyase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0332 SPO_0332 "argininosuccinate lyase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1261 DET_1261 "argininosuccinate lyase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0279 SO_0279 "argininosuccinate lyase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TAIR|locus:2183825 AT5G10920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KNT9 argH "Argininosuccinate lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2641 VC_2641 "argininosuccinate lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3SM68ARLY_THIDA4, ., 3, ., 2, ., 10.42540.67250.6609yesN/A
B7V5F3ARLY_PSEA84, ., 3, ., 2, ., 10.50760.57360.5625yesN/A
Q1QSV4ARLY_CHRSD4, ., 3, ., 2, ., 10.50180.57800.5631yesN/A
Q1GXA9ARLY_METFK4, ., 3, ., 2, ., 10.42460.70100.6816yesN/A
B1J1V0ARLY_PSEPW4, ., 3, ., 2, ., 10.51980.55380.5431yesN/A
C1D665ARLY_LARHH4, ., 3, ., 2, ., 10.42590.69230.6832yesN/A
Q88B94ARLY_PSESM4, ., 3, ., 2, ., 10.52770.55380.5431yesN/A
B0VDE4ARLY_ACIBY4, ., 3, ., 2, ., 10.51860.56920.5429yesN/A
P59618ARLY_PSEPK4, ., 3, ., 2, ., 10.51980.55380.5431yesN/A
A6TL09ARLY_ALKMQ4, ., 3, ., 2, ., 10.42610.73620.7282yesN/A
Q2Y6K2ARLY_NITMU4, ., 3, ., 2, ., 10.42210.69890.6680yesN/A
Q4K3X1ARLY_PSEF54, ., 3, ., 2, ., 10.52770.55380.5431yesN/A
Q02EA0ARLY_PSEAB4, ., 3, ., 2, ., 10.50380.57360.5625yesN/A
Q3JDS2ARLY_NITOC4, ., 3, ., 2, ., 10.45870.67470.6573yesN/A
A4XNY5ARLY_PSEMY4, ., 3, ., 2, ., 10.52380.55380.5431yesN/A
Q82TN0ARLY_NITEU4, ., 3, ., 2, ., 10.45060.67690.6681yesN/A
Q1I314ARLY_PSEE44, ., 3, ., 2, ., 10.52770.55380.5431yesN/A
A4VGX6ARLY_PSEU54, ., 3, ., 2, ., 10.51380.55600.5452yesN/A
Q3K4S8ARLY2_PSEPF4, ., 3, ., 2, ., 10.52380.55380.5431yesN/A
B0KH03ARLY_PSEPG4, ., 3, ., 2, ., 10.52770.55380.5431yesN/A
Q609I6ARLY_METCA4, ., 3, ., 2, ., 10.43470.67030.6559yesN/A
Q0AGL1ARLY_NITEC4, ., 3, ., 2, ., 10.42810.68350.6746yesN/A
B0VMC7ARLY_ACIBS4, ., 3, ., 2, ., 10.52230.56920.5429yesN/A
B2I1W9ARLY_ACIBC4, ., 3, ., 2, ., 10.52230.56920.5429yesN/A
Q21EF4ARLY_SACD24, ., 3, ., 2, ., 10.54150.53840.5223yesN/A
Q500N3ARLY_PSEU24, ., 3, ., 2, ., 10.53170.55380.5431yesN/A
A1AX52ARLY_RUTMC4, ., 3, ., 2, ., 10.55730.53840.5104yesN/A
Q2SQ67ARLY_HAHCH4, ., 3, ., 2, ., 10.44240.71640.6965yesN/A
C3K426ARLY_PSEFS4, ., 3, ., 2, ., 10.51580.55380.5431yesN/A
Q5FA15ARLY_NEIG14, ., 3, ., 2, ., 10.50390.56260.5589yesN/A
C1DJ48ARLY_AZOVD4, ., 3, ., 2, ., 10.52770.55380.5431yesN/A
Q48QD3ARLY_PSE144, ., 3, ., 2, ., 10.53170.55380.5431yesN/A
B8GSV2ARLY_THISH4, ., 3, ., 2, ., 10.45910.61750.6017yesN/A
P50987ARLY_PSEAE4, ., 3, ., 2, ., 10.50380.57360.5625yesN/A
B7I338ARLY_ACIB54, ., 3, ., 2, ., 10.51860.56920.5429yesN/A
B5ED16ARLY_GEOBB4, ., 3, ., 2, ., 10.42370.69230.6877yesN/A
Q0VM25ARLY_ALCBS4, ., 3, ., 2, ., 10.55870.52960.5193yesN/A
Q3A1V0ARLY_PELCD4, ., 3, ., 2, ., 10.51200.54500.5379yesN/A
B7H1L9ARLY_ACIB34, ., 3, ., 2, ., 10.51860.56920.5429yesN/A
A6VE40ARLY_PSEA74, ., 3, ., 2, ., 10.50380.57360.5625yesN/A
Q31JG7ARLY_THICR4, ., 3, ., 2, ., 10.52170.55600.5476yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.2.10.824
3rd Layer4.3.20.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 1e-133
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 1e-116
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 1e-112
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 1e-105
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 1e-105
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 4e-97
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 5e-93
PRK04833455 PRK04833, PRK04833, argininosuccinate lyase; Provi 5e-92
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 3e-88
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 3e-82
PRK12308 614 PRK12308, PRK12308, bifunctional argininosuccinate 1e-79
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 3e-74
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 3e-69
PRK04833455 PRK04833, PRK04833, argininosuccinate lyase; Provi 4e-65
PRK12308614 PRK12308, PRK12308, bifunctional argininosuccinate 4e-55
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 2e-50
pfam00206312 pfam00206, Lyase_1, Lyase 5e-44
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 3e-33
PRK02186887 PRK02186, PRK02186, argininosuccinate lyase; Provi 1e-31
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provi 4e-31
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 9e-28
PRK02186887 PRK02186, PRK02186, argininosuccinate lyase; Provi 9e-27
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 3e-25
pfam00206312 pfam00206, Lyase_1, Lyase 7e-22
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 5e-19
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 3e-18
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provi 1e-16
PRK06389434 PRK06389, PRK06389, argininosuccinate lyase; Provi 3e-15
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 4e-15
cd01357450 cd01357, Aspartase, Aspartase 5e-13
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 1e-12
PRK06389434 PRK06389, PRK06389, argininosuccinate lyase; Provi 2e-12
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 5e-12
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 4e-11
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 5e-11
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provision 3e-10
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 3e-10
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 9e-10
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 1e-09
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 3e-09
PRK07380431 PRK07380, PRK07380, adenylosuccinate lyase; Provis 3e-09
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 1e-08
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 2e-08
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 3e-08
COG0114462 COG0114, FumC, Fumarase [Energy production and con 9e-08
cd01362455 cd01362, Fumarase_classII, Class II fumarases 1e-07
PRK14515479 PRK14515, PRK14515, aspartate ammonia-lyase; Provi 3e-07
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 3e-07
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 7e-07
cd03302436 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate 2e-06
cd01598425 cd01598, PurB, PurB_like adenylosuccinases (adenyl 3e-06
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 7e-06
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 1e-05
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 5e-05
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provis 2e-04
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 2e-04
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information 
 Score =  390 bits (1004), Expect = e-133
 Identities = 138/249 (55%), Positives = 184/249 (73%)

Query: 184 AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFI 243
           AALAGTT  I+R  TA+LL F+  +ENSLD++SDRDF +EF+S   L+++HLSR++EE I
Sbjct: 200 AALAGTTFPIDRERTAELLGFDGVTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELI 259

Query: 244 IFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAY 303
           ++ + +F F+ LP++F TGSSIMPQKKNPDV ELIRGKTGR+Y NL  +LT MK   LAY
Sbjct: 260 LWSSQEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLAY 319

Query: 304 NKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKK 363
           N+DLQEDK PLFD VD + + L A   ++E  T N++ M E A KGFS +TD+ADYLV+K
Sbjct: 320 NRDLQEDKEPLFDAVDTLKLSLEAMAGMLETLTVNKERMREAAGKGFSTATDLADYLVRK 379

Query: 364 GVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHI 423
           GVPFR +HEIVG  ++   E+     DLSL EL+ F   I++D+ ++L  E S+  +N I
Sbjct: 380 GVPFREAHEIVGKAVREAEERGVDLADLSLEELQAFSPLITEDVYEVLTPEGSVAARNSI 439

Query: 424 GGTSPEQVK 432
           GGT+PEQV+
Sbjct: 440 GGTAPEQVR 448

Length = 459
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|235010 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|235010 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180954 PRK07380, PRK07380, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|237743 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|176471 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>gnl|CDD|176470 cd01598, PurB, PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|236352 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 455
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
PLN02646474 argininosuccinate lyase 100.0
KOG1316|consensus464 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
TIGR00838455 argH argininosuccinate lyase. This model describes 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
PRK07492435 adenylosuccinate lyase; Provisional 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
TIGR00928435 purB adenylosuccinate lyase. This family consists 100.0
PRK12273472 aspA aspartate ammonia-lyase; Provisional 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
PRK14515479 aspartate ammonia-lyase; Provisional 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
PLN02848458 adenylosuccinate lyase 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
KOG2700|consensus481 100.0
KOG1317|consensus487 99.98
PRK08937216 adenylosuccinate lyase; Provisional 99.97
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 99.96
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 99.83
PF1469870 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1 99.45
PRK08937216 adenylosuccinate lyase; Provisional 99.29
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 99.26
PF1039781 ADSL_C: Adenylosuccinate lyase C-terminus; InterPr 99.22
TIGR00838455 argH argininosuccinate lyase. This model describes 99.14
PRK00855459 argininosuccinate lyase; Provisional 99.07
cd01334325 Lyase_I Lyase class I family; a group of proteins 99.04
KOG1316|consensus464 99.03
PRK02186887 argininosuccinate lyase; Provisional 98.99
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 98.98
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 98.96
PLN02646474 argininosuccinate lyase 98.93
PRK06705502 argininosuccinate lyase; Provisional 98.89
PRK04833455 argininosuccinate lyase; Provisional 98.85
PRK00485464 fumC fumarate hydratase; Reviewed 98.84
PRK12308614 bifunctional argininosuccinate lyase/N-acetylgluta 98.81
PRK06389434 argininosuccinate lyase; Provisional 98.81
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 98.79
cd01357450 Aspartase Aspartase. This subgroup contains Escher 98.78
PLN00134458 fumarate hydratase; Provisional 98.78
PRK12273472 aspA aspartate ammonia-lyase; Provisional 98.76
PRK12425464 fumarate hydratase; Provisional 98.75
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 98.73
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 98.72
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 98.71
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 98.7
PRK06390451 adenylosuccinate lyase; Provisional 98.69
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 98.68
PRK14515479 aspartate ammonia-lyase; Provisional 98.66
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 98.61
PRK13353473 aspartate ammonia-lyase; Provisional 98.61
TIGR00928435 purB adenylosuccinate lyase. This family consists 98.59
PRK07492435 adenylosuccinate lyase; Provisional 98.59
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 98.58
KOG2700|consensus481 98.53
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 98.52
cd01362455 Fumarase_classII Class II fumarases. This subgroup 98.49
PRK07380431 adenylosuccinate lyase; Provisional 98.48
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 98.46
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 98.45
PRK08540449 adenylosuccinate lyase; Reviewed 98.39
PRK08470442 adenylosuccinate lyase; Provisional 98.35
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 98.32
COG0114462 FumC Fumarase [Energy production and conversion] 98.15
PRK09285456 adenylosuccinate lyase; Provisional 97.97
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 97.86
PLN02848458 adenylosuccinate lyase 97.63
PF08328115 ASL_C: Adenylosuccinate lyase C-terminal; InterPro 96.08
PF1041555 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR0 95.85
KOG1317|consensus487 95.38
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-80  Score=629.11  Aligned_cols=346  Identities=50%  Similarity=0.823  Sum_probs=332.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3416           1 MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVN   80 (455)
Q Consensus         1 ~~~ta~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~tvm~grTh~Q~A~P~T~G~~la~~~~~L~r~~~rL~~~~~r~~   80 (455)
                      +|+|+++||+|+.+..+...+..|+++|.++|++|.+++||||||+|+|||+|||||+.+|.+.|.||.+||.++++|++
T Consensus       113 QVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn  192 (459)
T COG0165         113 QVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVN  192 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCccccCCCCcCcchHHHHHhcCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceecccC
Q psy3416          81 ISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPE  160 (455)
Q Consensus        81 ~~~lGga~~~G~~~~~~~~~~a~~LG~~~~~~n~~~~~~~Rd~~~e~~~~l~~la~~l~kia~Dl~~l~~~ei~el~~~e  160 (455)
                      .+|||+|+++|+++|+||+++|++|||+.+..|++|++++||+++|+.++++.                           
T Consensus       193 ~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~~~s~---------------------------  245 (459)
T COG0165         193 VSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLSAAAL---------------------------  245 (459)
T ss_pred             cCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHHHHHHHHHH---------------------------
Confidence            99999999999999999999999999999999988877777777776665554                           


Q ss_pred             CCCccccccCCCCCcchHHHHHHHHhhcccccchhhHHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy3416         161 SFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISE  240 (455)
Q Consensus       161 ~~~~gSStMP~K~NP~~~e~~~~~~~~gt~~~~~~~~~a~~l~~~~~~~~s~~a~~~rd~~~~~~~~~~~~~~~l~~~~~  240 (455)
                                                                                            ++.||||+|+
T Consensus       246 ----------------------------------------------------------------------~~~~LSRlae  255 (459)
T COG0165         246 ----------------------------------------------------------------------IMVHLSRLAE  255 (459)
T ss_pred             ----------------------------------------------------------------------HHHHHHHHHH
Confidence                                                                                  4558888999


Q ss_pred             HHHhhhccccccccccccccccCccCccccChhHHHHHHhhhhhhhhhhHHHHHhhhcchhhcccccccccchHhHHHHH
Q psy3416         241 EFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDN  320 (455)
Q Consensus       241 d~~~~~s~~~~~~~lp~~~~~~SS~mp~K~np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~  320 (455)
                      |+.+|+|.||+|+.||+.+.+||||||||||||.+|++|+++++++|...+++++++++|++||+|+|++++++|++++.
T Consensus       256 dlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQedke~lfds~~t  335 (459)
T COG0165         256 DLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDT  335 (459)
T ss_pred             HHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhhhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHhhhcCCHHHHHHHhccCHhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHcCCCchhhhHHHHhhhh
Q psy3416         321 IIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFH  400 (455)
Q Consensus       321 ~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~la~~L~~~g~~~r~Ah~~v~~~~~~a~~~g~~~~e~~~~~~~~~~  400 (455)
                      +..+|..+..++++|+||+++|++.+..|++++|++|++|+++|+|||+||++|+++|+.+.+.|+++.++..++.+.++
T Consensus       336 ~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~~l~~l~~~~~~~~~  415 (459)
T COG0165         336 LEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAEERGKDLADLSLEELQSIS  415 (459)
T ss_pred             HHHHHHHHHHHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCHHhccHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             cCCchHHHHhcChhhhhhhhccCCCCcHHHHHHHHHHHHHHHH
Q psy3416         401 SYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYIQ  443 (455)
Q Consensus       401 ~~~~~~l~~~ldp~~~v~~~~~~~G~a~~~v~~~l~~~~~~~~  443 (455)
                      +.+++++.++++|+.+|+.|..+||++|++|++.+++++..++
T Consensus       416 ~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~  458 (459)
T COG0165         416 PLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA  458 (459)
T ss_pred             cccchHHHHHhchHHHHHHhhccCCCCHHHHHHHHHHHHHhhc
Confidence            8899999999999999999999999999999999999998764

>PLN02646 argininosuccinate lyase Back     alignment and domain information
>KOG1316|consensus Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>KOG2700|consensus Back     alignment and domain information
>KOG1317|consensus Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) [] Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>KOG1316|consensus Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02646 argininosuccinate lyase Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>KOG2700|consensus Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli) Back     alignment and domain information
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle Back     alignment and domain information
>KOG1317|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
2e9f_A462 Crystal Structure Of T.th.hb8 Argininosuccinate Lya 7e-63
1tj7_A457 Structure Determination And Refinement At 2.44 A Re 1e-57
1xwo_A465 Crystal Structrue Of Goose Delta Crystallin Length 7e-54
1k7w_A468 Crystal Structure Of S283a Duck Delta 2 Crystallin 7e-53
1dcn_A447 Inactive Mutant H162n Of Delta 2 Crystallin With Bo 8e-53
1hy1_A468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 2e-52
1tju_A474 Crystal Structure Of T161s Duck Delta 2 Crystallin 2e-52
1tjv_A474 Crystal Structure Of T161d Duck Delta 2 Crystallin 2e-52
1auw_A468 H91n Delta 2 Crystallin From Duck Length = 468 4e-52
1hy0_A466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 6e-52
1u15_A472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 9e-52
1i0a_A466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 6e-49
1aos_A464 Human Argininosuccinate Lyase Length = 464 3e-46
1k62_A464 Crystal Structure Of The Human Argininosuccinate Ly 1e-45
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 4e-11
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 5e-10
1j3u_A468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 1e-09
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 6e-09
3r6y_A401 Crystal Structure Of Chymotrypsin-Treated Aspartase 7e-09
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 2e-08
3rrp_A471 Crystal Structure Of Fumarate Hydratase Fum From My 1e-06
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 7e-06
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 8e-04
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 8e-06
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 8e-06
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 9e-04
4adl_A495 Crystal Structures Of Rv1098c In Complex With Malat 9e-06
3no9_A475 Crystal Structure Of Apo Fumarate Hydratase From My 1e-05
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 1e-05
4apa_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 2e-05
4apb_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 4e-05
3rd8_A489 Crystal Structure Of Fumarate Hydratase Class Ii My 6e-05
3qbp_A478 Crystal Structure Of Fumarase Fum From Mycobacteriu 6e-05
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 8e-05
1yfm_A488 Recombinant Yeast Fumarase Length = 488 9e-05
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 2e-04
3oce_A474 Crystal Structure Of Fumarate Lyase:delta Crystalli 2e-04
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase Complexed With L-arginine Length = 462 Back     alignment and structure 
Iteration: 1

 Score =  238 bits (606), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 105/249 (42%), Positives = 162/249 (65%)
Query: 184 AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFI 243
           AALAGT   I+R+ TA+ L F+ P  NSLD+++ RDF +E +S   + ++HLSR++EE I
Sbjct: 201 AALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELI 260
Query: 244 IFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAY 303
           ++   +F F+ +P++F TGSSIMPQKKNPD+LELIR K GR+    + +   +K   LAY
Sbjct: 261 LYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAY 320
Query: 304 NKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKK 363
           NKDLQEDK PL D +      L     L+    +  + M+  A  G++++T++ADYL +K
Sbjct: 321 NKDLQEDKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAEGGYTLATELADYLAEK 380
Query: 364 GVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHI 423
           G+PFR +H +VG +++   E+ +  KDL+L EL+  H   ++D + +L +E +I  +   
Sbjct: 381 GLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLFAEDALPLLRLETAIHRRRSY 440
Query: 424 GGTSPEQVK 432
           GGT+PE V+
Sbjct: 441 GGTAPEAVR 449
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 Back     alignment and structure
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 Back     alignment and structure
>pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From Bacillus Sp. Ym55-1 Length = 401 Back     alignment and structure
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate Length = 495 Back     alignment and structure
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (Rv1098c) S318a In Apo Form Length = 474 Back     alignment and structure
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase ( Rv1098c) S318c In Complex With Fumarate Length = 474 Back     alignment and structure
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii Mycobacterium Smegmatis Length = 489 Back     alignment and structure
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 1e-137
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 1e-101
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 1e-137
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 1e-100
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 1e-132
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 1e-100
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 4e-23
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 4e-06
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 5e-23
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 5e-08
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 6e-23
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 1e-07
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 3e-22
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 4e-07
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 8e-21
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 1e-09
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 2e-20
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 2e-09
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 1e-19
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 7e-08
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 2e-19
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 1e-06
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 1e-15
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 8e-10
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 9e-10
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 4e-08
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 1e-07
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 2e-07
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 2e-07
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 1e-06
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 2e-06
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 2e-06
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 2e-06
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 3e-06
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 1e-05
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
 Score =  401 bits (1032), Expect = e-137
 Identities = 108/263 (41%), Positives = 157/263 (59%), Gaps = 8/263 (3%)

Query: 178 KDLRQR--------AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCC 229
           +D  +R         ALAGT + I+R   A  L F   + NSLDS+SDRD V+E +S   
Sbjct: 184 QDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAA 243

Query: 230 LIVMHLSRISEEFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANL 289
           + ++HLSR +E+ I F   +  F+ L +   +GSS+MPQKKNPD LELIRGK GR+   L
Sbjct: 244 IGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGAL 303

Query: 290 INILTTMKCQTLAYNKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKG 349
             ++ T+K   LAYNKD+QEDK  LFD +D  + CL  +  +++          E A +G
Sbjct: 304 TGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQG 363

Query: 350 FSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIID 409
           ++ +T++ADYLV KGVPFR +H IVG  +     + K  +DL L+EL+ F   I +D+  
Sbjct: 364 YANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYP 423

Query: 410 ILCIENSIKFKNHIGGTSPEQVK 432
           IL +++ +  +   GG SP+QV 
Sbjct: 424 ILSLQSCLDKRAAKGGVSPQQVA 446
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 100.0
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 99.04
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 99.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 98.99
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 98.89
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 98.89
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 98.87
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 98.85
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 98.82
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 98.81
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 98.81
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 98.79
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 98.77
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 98.73
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 98.7
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 98.69
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 98.69
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 98.68
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 98.66
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 98.61
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 98.59
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 98.58
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 98.39
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 98.33
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 98.18
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 98.1
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 97.83
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
Probab=100.00  E-value=6.1e-74  Score=600.54  Aligned_cols=345  Identities=39%  Similarity=0.665  Sum_probs=324.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3416           1 MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVN   80 (455)
Q Consensus         1 ~~~ta~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~tvm~grTh~Q~A~P~T~G~~la~~~~~L~r~~~rL~~~~~r~~   80 (455)
                      |++|+++|++|+++..+.+.|..|+++|.++|++|+++|||||||+|||+||||||++++|++.|.|+++||.+++++++
T Consensus       112 ~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~  191 (457)
T 1tj7_A          112 QVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLD  191 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCeechHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCccccCCCCcCcchHHHHHhcCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceecccC
Q psy3416          81 ISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPE  160 (455)
Q Consensus        81 ~~~lGga~~~G~~~~~~~~~~a~~LG~~~~~~n~~~~~~~Rd~~~e~~~~l~~la~~l~kia~Dl~~l~~~ei~el~~~e  160 (455)
                      .+|+||++++|++++++++++++.|||+.+..|+++|+++||++++++++++.++++++|||+|+++|+++         
T Consensus       192 ~~~lGgaA~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---------  262 (457)
T 1tj7_A          192 VSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTG---------  262 (457)
T ss_dssp             CBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---------
T ss_pred             hcCccccccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence            99999999989999999999999999999999999999999999999999998888777666666555554         


Q ss_pred             CCCccccccCCCCCcchHHHHHHHHhhcccccchhhHHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy3416         161 SFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISE  240 (455)
Q Consensus       161 ~~~~gSStMP~K~NP~~~e~~~~~~~~gt~~~~~~~~~a~~l~~~~~~~~s~~a~~~rd~~~~~~~~~~~~~~~l~~~~~  240 (455)
                                                                                                      
T Consensus       263 --------------------------------------------------------------------------------  262 (457)
T 1tj7_A          263 --------------------------------------------------------------------------------  262 (457)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHhhhccccccccccccccccCccCccccChhHHHHHHhhhhhhhhhhHHHHHhhhcchhhcccccccccchHhHHHHH
Q psy3416         241 EFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDN  320 (455)
Q Consensus       241 d~~~~~s~~~~~~~lp~~~~~~SS~mp~K~np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~  320 (455)
                              |++|+++|+.+.+|||||||||||+.+|.++++++++.|++.+++.+++++|++||||+|++|..++++++.
T Consensus       263 --------e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~~~~~l~~s~~~  334 (457)
T 1tj7_A          263 --------EAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDT  334 (457)
T ss_dssp             --------TTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGGHHHHHHHHHHH
T ss_pred             --------CCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcchhhHHhHHHHHHHH
Confidence                    445556666677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHhhhcCCHHHHHHHhccCHhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHcCCCchhhhHHHHhhhh
Q psy3416         321 IIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFH  400 (455)
Q Consensus       321 ~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~la~~L~~~g~~~r~Ah~~v~~~~~~a~~~g~~~~e~~~~~~~~~~  400 (455)
                      +..+++.+..++++|+||+++|++|+.+|++++|+++++|+++|+|||+||+++++++++|.++|+++.|++.++.+.+.
T Consensus       335 ~~~~l~~~~~~l~gl~vn~~~m~~~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~  414 (457)
T 1tj7_A          335 WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFS  414 (457)
T ss_dssp             HHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGGSCHHHHTTTC
T ss_pred             HHHHHHHHHHHHccCEECHHHHHHHHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998766677


Q ss_pred             cCCchHHHHhcChhhhhhhhccCCCCcHHHHHHHHHHHHHHH
Q psy3416         401 SYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYI  442 (455)
Q Consensus       401 ~~~~~~l~~~ldp~~~v~~~~~~~G~a~~~v~~~l~~~~~~~  442 (455)
                      +.+++++.+++||+++++.|.++||++|++|+++++.+++.+
T Consensus       415 ~~~~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~~l  456 (457)
T 1tj7_A          415 QVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARL  456 (457)
T ss_dssp             TTCCTTHHHHTSHHHHHHTCCSTTCCSHHHHHHHHHHHHHHH
T ss_pred             hhcHHHHHHhCCHHHHHhccCCCCCCCHHHHHHHHHHHHHhc
Confidence            777889999999999999999999999999999999988765
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 455
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 7e-63
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 3e-27
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 2e-52
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 4e-23
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 6e-51
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 5e-28
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 1e-34
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 3e-24
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 2e-28
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 3e-26
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 2e-27
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 8e-27
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 3e-25
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 4e-21
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 9e-25
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 6e-11
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 3e-23
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 3e-21
d1re5a_448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 1e-21
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 5e-20
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 1e-19
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 5e-20
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 1e-07
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

 Score =  208 bits (530), Expect = 7e-63
 Identities = 106/249 (42%), Positives = 153/249 (61%)

Query: 184 AALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFI 243
            ALAGT + I+R   A  L F   + NSLDS+SDRD V+E +S   + ++HLSR +E+ I
Sbjct: 196 GALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLI 255

Query: 244 IFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAY 303
            F   +  F+ L +   +GSS+MPQKKNPD LELIRGK GR+   L  ++ T+K   LAY
Sbjct: 256 FFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAY 315

Query: 304 NKDLQEDKLPLFDTVDNIIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKK 363
           NKD+QEDK  LFD +D  + CL  +  +++          E A +G++ +T++ADYLV K
Sbjct: 316 NKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAK 375

Query: 364 GVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFHSYISDDIIDILCIENSIKFKNHI 423
           GVPFR +H IVG  +     + K  +DL L+EL+ F   I +D+  IL +++ +  +   
Sbjct: 376 GVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAK 435

Query: 424 GGTSPEQVK 432
           GG SP+QV 
Sbjct: 436 GGVSPQQVA 444
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 98.88
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 98.88
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 98.84
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 98.66
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 98.57
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 98.53
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 98.49
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 98.41
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 98.33
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 98.22
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 98.17
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 97.89
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 97.79
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-72  Score=587.13  Aligned_cols=345  Identities=39%  Similarity=0.665  Sum_probs=326.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3416           1 MIVTDLRLYTRKHIDIIIELLLTMIKHLTDLSDKHAKTIMPGFTHFQIAQPISLGHYLLAYASMFQRDINRLIDCRKRVN   80 (455)
Q Consensus         1 ~~~ta~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~tvm~grTh~Q~A~P~T~G~~la~~~~~L~r~~~rL~~~~~r~~   80 (455)
                      |++|+++|++|+++..+.+.|..|+++|.++|++|++||||||||+|||+|||||||+++|+++|.|+.+||.+++++++
T Consensus       110 ~~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~~~~  189 (455)
T d1tj7a_         110 QVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLD  189 (455)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhchhhhHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCccccCCCCcCcchHHHHHhcCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceecccC
Q psy3416          81 ISPLGSAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISEEFIIFMNPQFNFLTLPE  160 (455)
Q Consensus        81 ~~~lGga~~~G~~~~~~~~~~a~~LG~~~~~~n~~~~~~~Rd~~~e~~~~l~~la~~l~kia~Dl~~l~~~ei~el~~~e  160 (455)
                      .+|+||++++|++++.+++++++.|||..+..|+++|+++||+++++.+.++.++.+++|||+|+++|++++++++    
T Consensus       190 ~~~lG~~a~~g~~~~~~~~~~a~~Lg~~~~~~n~~~~~~~rd~~~e~~~~l~~~~~~L~ria~Dl~l~~s~e~~~~----  265 (455)
T d1tj7a_         190 VSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFV----  265 (455)
T ss_dssp             CBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCE----
T ss_pred             HHHhcccccccCcCcchHHHHHHHhCCCcccCCccchhhchHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhee----
Confidence            9999999999999999999999999999999999999999999999999999998888877777777776666554    


Q ss_pred             CCCccccccCCCCCcchHHHHHHHHhhcccccchhhHHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy3416         161 SFLTGSSIMPQKKNPDVKDLRQRAALAGTTHHINRYLTAKLLDFEKPSENSLDSISDRDFVIEFISTCCLIVMHLSRISE  240 (455)
Q Consensus       161 ~~~~gSStMP~K~NP~~~e~~~~~~~~gt~~~~~~~~~a~~l~~~~~~~~s~~a~~~rd~~~~~~~~~~~~~~~l~~~~~  240 (455)
                                                                                                      
T Consensus       266 --------------------------------------------------------------------------------  265 (455)
T d1tj7a_         266 --------------------------------------------------------------------------------  265 (455)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHhhhccccccccccccccccCccCccccChhHHHHHHhhhhhhhhhhHHHHHhhhcchhhcccccccccchHhHHHHH
Q psy3416         241 EFIIFMNPQFNFLTLPESFLTGSSIMPQKKNPDVLELIRGKTGRIYANLINILTTMKCQTLAYNKDLQEDKLPLFDTVDN  320 (455)
Q Consensus       241 d~~~~~s~~~~~~~lp~~~~~~SS~mp~K~np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~  320 (455)
                                   ++|+.+++|||||||||||+.+|.++++++.+.|...+++.+++++|++||+|+++++..++++++.
T Consensus       266 -------------~~~~~~~~GSSiMP~KrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~  332 (455)
T d1tj7a_         266 -------------ELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDT  332 (455)
T ss_dssp             -------------ECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGGHHHHHHHHHHH
T ss_pred             -------------eccccccccccccccccCchHHHHHHhHHHHHHhHHHHHHHHHhcccHHHHhhHHHHHHHHHHHHHH
Confidence                         4455577888888888888899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHhhhcCCHHHHHHHhccCHhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHcCCCchhhhHHHHhhhh
Q psy3416         321 IIMCLVASGKLIEKATFNEQEMYETAIKGFSISTDVADYLVKKGVPFRTSHEIVGSIIKYCNEKHKTFKDLSLAELKTFH  400 (455)
Q Consensus       321 ~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~la~~L~~~g~~~r~Ah~~v~~~~~~a~~~g~~~~e~~~~~~~~~~  400 (455)
                      +..++..+..++++++||+++|++++..|++++|+++++|+++|+|||+||++|++++++|.++|+++.|+.+++.+.+.
T Consensus       333 ~~~~l~~~~~~i~~l~vn~erm~~~~~~~~~~at~la~~Lv~kgi~freAh~~V~~~v~~A~~~g~~l~el~l~e~~~~~  412 (455)
T d1tj7a_         333 WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFS  412 (455)
T ss_dssp             HHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGGSCHHHHTTTC
T ss_pred             HHHHHHHHHHhhhhhhhcchhHHHHhhcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998887777


Q ss_pred             cCCchHHHHhcChhhhhhhhccCCCCcHHHHHHHHHHHHHHH
Q psy3416         401 SYISDDIIDILCIENSIKFKNHIGGTSPEQVKITVQGFRFYI  442 (455)
Q Consensus       401 ~~~~~~l~~~ldp~~~v~~~~~~~G~a~~~v~~~l~~~~~~~  442 (455)
                      ..+++|+..+|||+++|++|.++||++|++|+++|+.++++|
T Consensus       413 ~~~~~di~~~ldp~~~v~~r~s~GG~ap~~V~~~i~~ar~~L  454 (455)
T d1tj7a_         413 QVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARL  454 (455)
T ss_dssp             TTCCTTHHHHTSHHHHHHTCCSTTCCSHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHhCCHHHHHHhCcCCCCCCHHHHHHHHHHHHHhc
Confidence            888899999999999999999999999999999999999876
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure