Diaphorina citri psyllid: psy3487

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MSALNTTDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCRLTFYPYSYFSRQTQRRVLPWKPNTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEGVAPTDSRLRPDQRLLEVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKMLKEVYGHARVGHEKLGRLSRYQKIV
ccccccccccccccccCEEEEEEEEEcccccEEEEEEEEEccEEcEEccccccccccccEEEcccEEEEccccEEEEEEcccHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccEEEECcccccEEEEEccccccccEEEEEEEcccEEEEEEEcEEEEEEEEEEEEEEcEEEEEEECcccCEEEEEEccEEEEEEEEccEEEEccccEEEEEcccccEEEEEEEEccccccccccccccccccccccEEccccccccCEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHcccccccccccccccccccccccccccccHHcccEEcccEEEEEEcccEEcccccEEEEECcEEEEEEEEcccccEEEEEEEEEEEEEECcEEEEEcccccEEEEEEEEccEEEEEEcccccccEEEEEEEEEccEEEEccccccccccccCEEccEEEEEEEEEccccccCEEEEccccccccc
*****************MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCRLTFYPYSYFSRQTQRRVLPW**NTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEGVAPTDSRLRPDQRLLEVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKMLKEVYGHARVGHEKLGRLSRYQKI*
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MSALNTTDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCRLTFYPYSYFSRQTQRRVLPWKPNTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEGVAPTDSRLRPDQRLLEVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKMLKEVYGHARVGHEKLGRLSRYQKIV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0015485 [MF]cholesterol bindingprobableGO:0032934, GO:0043178, GO:0097159, GO:0008289, GO:0036094, GO:0003674, GO:0005488, GO:0005496

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZHX, chain A
Confidence level:very confident
Coverage over the Query: 108-297,311-319,332-387
View the alignment between query and template
View the model in PyMOL
Template: 1ZHX, chain A
Confidence level:very confident
Coverage over the Query: 284-452
View the alignment between query and template
View the model in PyMOL
Template: 2P0D, chain A
Confidence level:very confident
Coverage over the Query: 13-111
View the alignment between query and template
View the model in PyMOL
Template: 2HBT, chain A
Confidence level:confident
Coverage over the Query: 430-525
View the alignment between query and template
View the model in PyMOL