Diaphorina citri psyllid: psy3495

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
MCDITIFSDFVSDEEDFEVDGEVKLENIIKTLSVNLEQLQSYNEIINKHGAALLRTLSELESCDNPQELQCQIKEINERATLFRITTNAMINSCGKYLEIAQTQGGKWQRMLQHERDQRLKLEELLEQMARCSTGPPVHDSGPRLGGLPREEEAEDEEDSVFYDANEVMTENGGLDPAGRGLLEPVRYPYSPHFPSCSLMTQVYCIFSTDDEHDTDSSTSEVDEGVPNLPPRTSPSSLPPVDENSTTPLPNSKCQDALSQVVATKQ
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcc
******************VDGEVKLENIIKTLSVNLEQLQSYNEIINKHGAALLRTLSELESCDNPQELQCQIKEINERATLFRITTNAMINSCGKYLEIAQTQGGKWQRM*************************************************VFYDANEV*********AGRGLLEPVRYPYSPHFPSCSLMTQVYCIFS***************************************************QV*****
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MCDITIFSDFVSDEEDFEVDGEVKLENIIKTLSVNLEQLQSYNEIINKHGAALLRTLSELESCDNPQELQCQIKEINERATLFRITTNAMINSCGKYLEIAQTQGGKWQRMLQHERDQRLKLEELLEQMARCSTGPPVHDSGPRLGGLPREEEAEDEEDSVFYDANEVMTENGGLDPAGRGLLEPVRYPYSPHFPSCSLMTQVYCIFSTDDEHDTDSSTSEVDEGVPNLPPRTSPSSLPPVDENSTTPLPNSKCQDALSQVVATKQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0015485 [MF]cholesterol bindingprobableGO:0032934, GO:0043178, GO:0097159, GO:0008289, GO:0036094, GO:0003674, GO:0005488, GO:0005496

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4HPQ, chain C
Confidence level:probable
Coverage over the Query: 18-134
View the alignment between query and template
View the model in PyMOL
Template: 2RR3, chain B
Confidence level:probable
Coverage over the Query: 146-169
View the alignment between query and template
View the model in PyMOL