Diaphorina citri psyllid: psy3554

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670--
MHRNACTQTNEAGFMNYDIIAYGSICHDIKVHDLPDKKSKNYIGPHFSCSMTLKHHPNHNMPRERTLEFNNVIRSLQGKNIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSGPHHQGSVLLADEQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNICISTKTQAHGDQNTWISTKTQACEDTVRVTVPNKKYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVVFLAHNCKNIESSTPPYFTCNKSFLSARCTGYEGLLLQLTAHYSKSRVYASIGEGLPGVAGLQCEVSTIFIGLDFRAASRDYAFYVRQTLMKDIRCLLAHVISHWRGASRSPKSRDSSTLMKDIRCLLAHVISQLVTPQWIFCTNTPRSWRQGKVPALRYFIFLPTSPKKKSLIWHFMHRKKPPTVYHYFLRIKYRVVLGTGSCIVGIGLKGLPPPMGSI
ccccccccccccccccccccccccccccCEECcccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccECcccccccccccccHHHHHHHHHcccccEEHHccccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccEEEEEECccccccccHHHHHHcccccccEEEEEEEEEEEEEEccccEEEcccccccccccccc
**********EAGFMNYDIIAYGSICHDIKVHDLPDKKSKNYIGPHFSCSMTLK****HNMPRERTLEFNNVIRSLQGK********************GEFMLIAKTIGKNISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAK*************************VVLALQ************************************************************************************************************************NIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNICISTKTQAHGDQNTWISTKTQACEDTVRVTVPNKKYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVVFLAHNCKNIESSTPPYFTCNKSFLSARCTGYEGLLLQLTAHYSKSRVYASIGEGLPGVAGLQCEVSTIFIGLDFRAASRDYAFYVRQTLMKDIRCLLAHVISHW**************LMKDIRCLLAHVISQLVTPQWIFCTNTPRSWRQGKVPALRYFIFLPTSPKKKSLIWHFMHRKKPPTVYHYFLRIKYRVVLGTGSCIVGIGLKGLPPP****
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MHRNACTQTNEAGFMNYDIIAYGSICHDIKVHDLPDKKSKNYIGPHFSCSMTLKHHPNHNMPRERTLEFNNVIRSLQGKNIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSGPHHQGSVLLADEQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNICISTKTQAHGDQNTWISTKTQACEDTVRVTVPNKKYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVVFLAHNCKNIESSTPPYFTCNKSFLSARCTGYEGLLLQLTAHYSKSRVYASIGEGLPGVAGLQCEVSTIFIGLDFRAASRDYAFYVRQTLMKDIRCLLAHVISHWRGASRSPKSRDSSTLMKDIRCLLAHVISQLVTPQWIFCTNTPRSWRQGKVPALRYFIFLPTSPKKKSLIWHFMHRKKPPTVYHYFLRIKYRVVLGTGSCIVGIGLKGLPPPMGSI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Syntaxin-5 Mediates endoplasmic reticulum to Golgi transport.confidentQ24509
Syntaxin-5 Mediates endoplasmic reticulum to Golgi transport.confidentQ08DB5
Syntaxin-5 Mediates endoplasmic reticulum to Golgi transport.confidentQ13190

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016192 [BP]vesicle-mediated transportprobableGO:0006810, GO:0008150, GO:0051179, GO:0051234
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0016044 [BP]cellular membrane organizationprobableGO:0009987, GO:0016043, GO:0061024, GO:0008150, GO:0071840, GO:0044763, GO:0044699
GO:0051649 [BP]establishment of localization in cellprobableGO:0009987, GO:0008150, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006996 [BP]organelle organizationprobableGO:0009987, GO:0016043, GO:0008150, GO:0044699, GO:0044763, GO:0071840
GO:0044765 [BP]single-organism transportprobableGO:0051234, GO:0006810, GO:0008150, GO:0051179, GO:0044699
GO:0005801 [CC]cis-Golgi networkprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3HD7, chain B
Confidence level:very confident
Coverage over the Query: 297-365
View the alignment between query and template
View the model in PyMOL
Template: 1DN1, chain B
Confidence level:confident
Coverage over the Query: 96-230,243-257,277-356
View the alignment between query and template
View the model in PyMOL
Template: 3C98, chain B
Confidence level:confident
Coverage over the Query: 63-72,98-229,243-256,270-356
View the alignment between query and template
View the model in PyMOL
Template: 2NPS, chain B
Confidence level:probable
Coverage over the Query: 404-434
View the alignment between query and template
View the model in PyMOL